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Lag0018497 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0018497
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr5:28348390..28349008
RNA-Seq ExpressionLag0018497
SyntenyLag0018497
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN75375.1 hypothetical protein VITISV_029153 [Vitis vinifera]2.2e-1136.79Show/hide
Query:  LFGCKIGNWPTSYLG-ALNGNPRKDNFWTPVIEKMQKRLHNWGSSNIS---KGGLGIYDIHKKNVSLLAKWTRRFYSDQKALWRRFIATKYGVAKNRTSW
        +  CK  NWP  YLG  L GN +   FW PVIE++ +RL     + +S   K G+G+++   +N++LL KW RR+  +  ALW + I + YG   N   W
Subjt:  LFGCKIGNWPTSYLG-ALNGNPRKDNFWTPVIEKMQKRLHNWGSSNIS---KGGLGIYDIHKKNVSLLAKWTRRFYSDQKALWRRFIATKYGVAKNRTSW

Query:  ENTPLV
        +   +V
Subjt:  ENTPLV

GEY28602.1 nucleotide-binding alpha-beta plait domain-containing protein [Tanacetum cinerariifolium]9.7e-1236.13Show/hide
Query:  KNATNVQSLFGCKIGNWPTSYLGA-LNGNPRKDNFWTPVIEKMQKRLHNWGSSNIS---KGGLGIYDIHKKNVSLLAKWTRRFYSDQKALWRRFIATKYG
        +N  +  S  GC + N P SYLG  + GN  +   WT V++K++ RL NW   ++S   K GLG+  ++  N +L+ KW  RFYS +++LW R I   YG
Subjt:  KNATNVQSLFGCKIGNWPTSYLGA-LNGNPRKDNFWTPVIEKMQKRLHNWGSSNIS---KGGLGIYDIHKKNVSLLAKWTRRFYSDQKALWRRFIATKYG

Query:  ---------VAKNRTSWEN
                  A +R+ W N
Subjt:  ---------VAKNRTSWEN

MCH85507.1 LINE-1 reverse transcriptase like [Trifolium medium]5.7e-1236.7Show/hide
Query:  CKIGNWPTSYLG-ALNGNPRKDNFWTPVIEKMQKRLHNWGSSNIS----------KGGLGIYDIHKKNVSLLAKWTRRFYSDQKALWRRFIATKYGVAKN
        CKIG+ P  YLG  +  NPR+ + W PV+E +QKRL +W +  +S          +GGLG+ D+   N+SLL KW  R  S+  ++W+  +  KYG  ++
Subjt:  CKIGNWPTSYLG-ALNGNPRKDNFWTPVIEKMQKRLHNWGSSNIS----------KGGLGIYDIHKKNVSLLAKWTRRFYSDQKALWRRFIATKYGVAKN

Query:  RTSWENTPL
           W +  L
Subjt:  RTSWENTPL

RVW47872.1 Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]1.7e-1136.79Show/hide
Query:  LFGCKIGNWPTSYLG-ALNGNPRKDNFWTPVIEKMQKRLHNWGSSNIS---KGGLGIYDIHKKNVSLLAKWTRRFYSDQKALWRRFIATKYGVAKNRTSW
        +  CK  NWP  YLG  L GN +   FW PVIE++ +RL     + +S   K G+G+++   +N++LL KW RR+  +  ALW + I + YG   N   W
Subjt:  LFGCKIGNWPTSYLG-ALNGNPRKDNFWTPVIEKMQKRLHNWGSSNIS---KGGLGIYDIHKKNVSLLAKWTRRFYSDQKALWRRFIATKYGVAKNRTSW

Query:  ENTPLV
        +   +V
Subjt:  ENTPLV

RVX22481.1 hypothetical protein CK203_012567 [Vitis vinifera]2.8e-1145.56Show/hide
Query:  SLFGCKIGNWPTSYLGALNGNPRKD-NFWTPVIEKMQKRLHNWGSSNISKG-GLGIYDIHKKNVSLLAKWTRRFYSDQKALWRRFIATKY
        S+ GCKIG+ PTSYLG   G P K    W  V E+ +KRL  W    +SKG GLGI  +   N +LL KW  RF ++ ++LW++ I++KY
Subjt:  SLFGCKIGNWPTSYLGALNGNPRKD-NFWTPVIEKMQKRLHNWGSSNISKG-GLGIYDIHKKNVSLLAKWTRRFYSDQKALWRRFIATKY

TrEMBL top hitse value%identityAlignment
A0A2N9FRJ8 Reverse transcriptase domain-containing protein1.4e-1140.37Show/hide
Query:  LFGCKIGNWPTSYLG-ALNGNPRKDNFWTPVIEKMQKRLHNWGSSNISKGGLGIYDIHKKNVSLLAKWTRRFYSDQKALWRRFIATKYGVAKNRTSWENT
        L  C IG  P  YLG  L  + +    WTPVIEK+++RL  W      KGGLG+  +   N++LL KW  RF  ++  LWRR +A KYG  + R  W  T
Subjt:  LFGCKIGNWPTSYLG-ALNGNPRKDNFWTPVIEKMQKRLHNWGSSNISKGGLGIYDIHKKNVSLLAKWTRRFYSDQKALWRRFIATKYGVAKNRTSWENT

Query:  PLVPQRTHG
          +P+ ++G
Subjt:  PLVPQRTHG

A0A392M1M1 Cysteine-rich receptor-like protein kinase (Fragment)1.4e-1137.5Show/hide
Query:  SLFGCKIGNWPTSYLG-ALNGNPRKDNFWTPVIEKMQKRLHNWGSSNISK-----GGLGIYDIHKKNVSLLAKWTRRFYSDQKALWRRFIATKYGV-AKN
        +   CK G  P SYLG  +  NPR+ + W P+I ++++RL +WG+ + S+     GGLG+ D+ K N+SLL KW  R      A W+  +  KYG  A+ 
Subjt:  SLFGCKIGNWPTSYLG-ALNGNPRKDNFWTPVIEKMQKRLHNWGSSNISK-----GGLGIYDIHKKNVSLLAKWTRRFYSDQKALWRRFIATKYGV-AKN

Query:  RTSW
        +  W
Subjt:  RTSW

A0A392MDA7 LINE-1 reverse transcriptase like (Fragment)2.8e-1236.7Show/hide
Query:  CKIGNWPTSYLG-ALNGNPRKDNFWTPVIEKMQKRLHNWGSSNIS----------KGGLGIYDIHKKNVSLLAKWTRRFYSDQKALWRRFIATKYGVAKN
        CKIG+ P  YLG  +  NPR+ + W PV+E +QKRL +W +  +S          +GGLG+ D+   N+SLL KW  R  S+  ++W+  +  KYG  ++
Subjt:  CKIGNWPTSYLG-ALNGNPRKDNFWTPVIEKMQKRLHNWGSSNIS----------KGGLGIYDIHKKNVSLLAKWTRRFYSDQKALWRRFIATKYGVAKN

Query:  RTSWENTPL
           W +  L
Subjt:  RTSWENTPL

A0A438EJL5 Transposon TX1 uncharacterized 149 kDa protein8.0e-1236.79Show/hide
Query:  LFGCKIGNWPTSYLG-ALNGNPRKDNFWTPVIEKMQKRLHNWGSSNIS---KGGLGIYDIHKKNVSLLAKWTRRFYSDQKALWRRFIATKYGVAKNRTSW
        +  CK  NWP  YLG  L GN +   FW PVIE++ +RL     + +S   K G+G+++   +N++LL KW RR+  +  ALW + I + YG   N   W
Subjt:  LFGCKIGNWPTSYLG-ALNGNPRKDNFWTPVIEKMQKRLHNWGSSNIS---KGGLGIYDIHKKNVSLLAKWTRRFYSDQKALWRRFIATKYGVAKNRTSW

Query:  ENTPLV
        +   +V
Subjt:  ENTPLV

A5C7L0 Reverse transcriptase domain-containing protein1.0e-1136.79Show/hide
Query:  LFGCKIGNWPTSYLG-ALNGNPRKDNFWTPVIEKMQKRLHNWGSSNIS---KGGLGIYDIHKKNVSLLAKWTRRFYSDQKALWRRFIATKYGVAKNRTSW
        +  CK  NWP  YLG  L GN +   FW PVIE++ +RL     + +S   K G+G+++   +N++LL KW RR+  +  ALW + I + YG   N   W
Subjt:  LFGCKIGNWPTSYLG-ALNGNPRKDNFWTPVIEKMQKRLHNWGSSNIS---KGGLGIYDIHKKNVSLLAKWTRRFYSDQKALWRRFIATKYGVAKNRTSW

Query:  ENTPLV
        +   +V
Subjt:  ENTPLV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCGAGGTCTTCCTCCGCCATCCGACAAAGAATGCAACAAATGTACAGAGCCTGTTTGGTTGTAAAATTGGCAATTGGCCGACCAGCTATCTAGGCGCCCTTAATGG
CAACCCGAGAAAGGACAACTTCTGGACTCCAGTTATCGAGAAAATGCAGAAAAGGTTGCACAATTGGGGATCCTCCAACATATCTAAAGGCGGATTGGGTATTTATGACA
TACACAAAAAGAACGTCTCCCTTTTGGCCAAATGGACACGAAGATTCTACAGCGACCAGAAGGCATTATGGAGGAGGTTCATTGCCACCAAATATGGAGTGGCCAAAAAC
CGAACAAGTTGGGAAAACACTCCATTAGTTCCTCAAAGGACTCATGGAGATCCATCTAAAAGATGCAACACCTCATTTACAACTCCATAG
mRNA sequenceShow/hide mRNA sequence
ATGATCGAGGTCTTCCTCCGCCATCCGACAAAGAATGCAACAAATGTACAGAGCCTGTTTGGTTGTAAAATTGGCAATTGGCCGACCAGCTATCTAGGCGCCCTTAATGG
CAACCCGAGAAAGGACAACTTCTGGACTCCAGTTATCGAGAAAATGCAGAAAAGGTTGCACAATTGGGGATCCTCCAACATATCTAAAGGCGGATTGGGTATTTATGACA
TACACAAAAAGAACGTCTCCCTTTTGGCCAAATGGACACGAAGATTCTACAGCGACCAGAAGGCATTATGGAGGAGGTTCATTGCCACCAAATATGGAGTGGCCAAAAAC
CGAACAAGTTGGGAAAACACTCCATTAGTTCCTCAAAGGACTCATGGAGATCCATCTAAAAGATGCAACACCTCATTTACAACTCCATAG
Protein sequenceShow/hide protein sequence
MIEVFLRHPTKNATNVQSLFGCKIGNWPTSYLGALNGNPRKDNFWTPVIEKMQKRLHNWGSSNISKGGLGIYDIHKKNVSLLAKWTRRFYSDQKALWRRFIATKYGVAKN
RTSWENTPLVPQRTHGDPSKRCNTSFTTP