; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0018500 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0018500
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonuclease H
Genome locationchr5:28363285..28364465
RNA-Seq ExpressionLag0018500
SyntenyLag0018500
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GFZ16906.1 hypothetical protein Acr_26g0001760 [Actinidia rufa]5.2e-2535.04Show/hide
Query:  AQKYMRAEELLRSKRSEREHKRHSSFDQD------------RKKDKKQRTYDGGRGRAHPFGKFEKYTPTAILQDQVLMVIRNTGLLKFLGRMKSNPDKR
        A KY+ AEEL  +KR  R    H   + D            ++ D+  +  +  R R  P        P      QVL  I++   +K+  ++K++P KR
Subjt:  AQKYMRAEELLRSKRSEREHKRHSSFDQD------------RKKDKKQRTYDGGRGRAHPFGKFEKYTPTAILQDQVLMVIRNTGLLKFLGRMKSNPDKR

Query:  DKSQHCLFHWDHGHSTRNCIQLKDEIEAQIQNGYLKEFVAEVGAEAEADQKWPRPRLTKDVRDKEGPMREIRTIFGG-PVGGGSTRKKKVVAREARFEPE
        ++S++C FH DHGH+T +C QLK++I   I+ GYL+++VA+       ++++   R T            I+TI GG   GG ST  +K  AR A F   
Subjt:  DKSQHCLFHWDHGHSTRNCIQLKDEIEAQIQNGYLKEFVAEVGAEAEADQKWPRPRLTKDVRDKEGPMREIRTIFGG-PVGGGSTRKKKVVAREARFEPE

Query:  YRAYNAILGRSTLHDMKAITSTYHQLLKFPTQNGVRVIKGEQKASREGYWTTLK
           YNAILGR  L  +KAITSTYH  +KFPT  G+  +KG+QK +R+ + + +K
Subjt:  YRAYNAILGRSTLHDMKAITSTYHQLLKFPTQNGVRVIKGEQKASREGYWTTLK

XP_022142767.1 uncharacterized protein LOC111012805 [Momordica charantia]2.8e-2642.63Show/hide
Query:  AQKYMRAEELLRSKRSEREHKRHSSFDQDRKKDKKQRTYDGGRGRA---HPFGKFEKYTPTAILQDQVLMVIRNTGLLKFLGRMKSNPDKRDKSQHCLFH
        AQ+YM A E   SKR    + + +   ++R  DK Q +    R R+    P  KFEKYT T +  +QVLM I+N  LLK+  RM ++  KR K ++CLFH
Subjt:  AQKYMRAEELLRSKRSEREHKRHSSFDQDRKKDKKQRTYDGGRGRA---HPFGKFEKYTPTAILQDQVLMVIRNTGLLKFLGRMKSNPDKRDKSQHCLFH

Query:  WDHGHSTRNCIQLKDEIEAQIQNGYLKEFVAEVGAEAEADQKWPRPRLTKDVRDKEGPMREIRTIFGGPVGGGSTRKKKVVAREARFEPE
        WDHGH+T++C  LK+E+E  I  GYLKE+V E             P+ T++    + P REIRTI GGP+   S RK+K   REAR   E
Subjt:  WDHGHSTRNCIQLKDEIEAQIQNGYLKEFVAEVGAEAEADQKWPRPRLTKDVRDKEGPMREIRTIFGGPVGGGSTRKKKVVAREARFEPE

XP_022144467.1 uncharacterized protein LOC111014147 [Momordica charantia]1.2e-2633.98Show/hide
Query:  MVIRNTGLLKFLGRMKSNPDKRDKSQHCLFHWDHGHSTRNCIQLKDEIEAQIQNGYLKEFVAEVGAEAEADQKWPRPRLTKDVRDKEGPMREIRTIFGGP
        M I++  LLK+  RMK+   KR KS++CLFH  HGH+T++C  LK+E+E  I+ GYLKE+V E             P+ T++    + P REIRTI GGP
Subjt:  MVIRNTGLLKFLGRMKSNPDKRDKSQHCLFHWDHGHSTRNCIQLKDEIEAQIQNGYLKEFVAEVGAEAEADQKWPRPRLTKDVRDKEGPMREIRTIFGGP

Query:  VGGGSTRKKKVVAREARFEPE---------------------------YRA-------------------------------------------------
        +   S RK+K   REAR   E                           Y+A                                                 
Subjt:  VGGGSTRKKKVVAREARFEPE---------------------------YRA-------------------------------------------------

Query:  -------YNAILGRSTLHDMKAITSTYHQLLKFPTQNGVRVIKGEQKASREGYWTTLKE
               YNAILGR T+H ++AI STYHQ +KFPT  GV  IKGEQ+ SRE Y+T++++
Subjt:  -------YNAILGRSTLHDMKAITSTYHQLLKFPTQNGVRVIKGEQKASREGYWTTLKE

XP_022158257.1 uncharacterized protein LOC111024791 [Momordica charantia]4.7e-2635.77Show/hide
Query:  MAQKYMRAEELLRSKRSEREHKRHSSFDQDRKKDKKQRT-----YDGGRGRAHPFGKFEKYTPTAILQDQVLMVIRNTGLLKFLGR---MKSNPDKRDKS
        + +K  R E+ +  K++ +E +R  S  +D+              D G  R+ P   +E+YTPT I   ++L  I  TG+ K L R   ++ + +KR+K 
Subjt:  MAQKYMRAEELLRSKRSEREHKRHSSFDQDRKKDKKQRT-----YDGGRGRAHPFGKFEKYTPTAILQDQVLMVIRNTGLLKFLGR---MKSNPDKRDKS

Query:  QHCLFHWDHGHSTRNCIQLKDEIEAQIQNGYLKEFVAEVGAEAEADQKWPRPRLTKDVRDKEGPMREIRTIFGGPVGGGSTRKKKVVAREARFE-PEY--
        ++C FH DHGH+T +C +LK +IE  IQ+G  K+FV +  +    ++K  R R     R  + P   I TIFGG  GG S  K+K +ARE+R +  E+  
Subjt:  QHCLFHWDHGHSTRNCIQLKDEIEAQIQNGYLKEFVAEVGAEAEADQKWPRPRLTKDVRDKEGPMREIRTIFGGPVGGGSTRKKKVVAREARFE-PEY--

Query:  ----RAYNAILGRSTLHDMKAITSTYHQLLKFPTQNGVRVIKGEQK
             AYNAI GR  +H  +A+ ST HQ+LK+ T NGV  ++  +K
Subjt:  ----RAYNAILGRSTLHDMKAITSTYHQLLKFPTQNGVRVIKGEQK

XP_022158830.1 uncharacterized protein LOC111025293 [Momordica charantia]3.6e-2643.94Show/hide
Query:  AQKYMRAEELLRSKRSEREHKRHSSFDQDRKKDKKQRTYDGGRGRA---HPFGKFEKYTPTAILQDQVLMVIRNTGLLKFLGRMKSNPDKRDKSQHCLFH
        AQ+YM A E   SKR E + KR +   ++R  DK Q +    R R+    P  KFEKYTPT +  +QVLM I++  LLK+  RMK++  KR K ++CLFH
Subjt:  AQKYMRAEELLRSKRSEREHKRHSSFDQDRKKDKKQRTYDGGRGRA---HPFGKFEKYTPTAILQDQVLMVIRNTGLLKFLGRMKSNPDKRDKSQHCLFH

Query:  WDHGHSTRNCIQLKDEIEAQIQNGYLKEFVAEVGAEAEADQKWPRPRLTKDVRDKEGPMREIRTIFGGPVGGGSTRKKKVVAREARFEPE----YRAY
         DHGH+T++C  LK+E+E  I+ GYLKE+V E             P+ T++    + P REIRTI GGP+   S RK+K   REAR   E    Y AY
Subjt:  WDHGHSTRNCIQLKDEIEAQIQNGYLKEFVAEVGAEAEADQKWPRPRLTKDVRDKEGPMREIRTIFGGPVGGGSTRKKKVVAREARFEPE----YRAY

TrEMBL top hitse value%identityAlignment
A0A2N9GRM8 Uncharacterized protein1.0e-2632.39Show/hide
Query:  AQKYMRAEELLRSKRSEREHKRHSSFDQDRKKDKKQ-----RTYDGGRGRAHPFGKFEKYTPTAILQDQVLMVIRNTGLLKFLGRMKSNPDKRDKSQHCL
        A K+M AE+ L +       +R  + D+  +  K++      T +  R  A P  KF  +TP     D++L+ I++   L++ G+++S+P+ R K+ +C 
Subjt:  AQKYMRAEELLRSKRSEREHKRHSSFDQDRKKDKKQ-----RTYDGGRGRAHPFGKFEKYTPTAILQDQVLMVIRNTGLLKFLGRMKSNPDKRDKSQHCL

Query:  FHWDHGHSTRNCIQLKDEIEAQIQNGYLKEFVAEVGAEAEADQKWPRPRLTKDVRDKEGPMREIRTIFGGPVGGGSTR-KKKVVAREAR-----------
        FH DHGH T  C+ LK++IE  I+ G L+++V        A    P  +  +   ++ GP+ EIRTI GGP  GG++R  +K  AR+             
Subjt:  FHWDHGHSTRNCIQLKDEIEAQIQNGYLKEFVAEVGAEAEADQKWPRPRLTKDVRDKEGPMREIRTIFGGPVGGGSTR-KKKVVAREAR-----------

Query:  ---------FEPE------------------YRAYNAILGRSTLHDMKAITSTYHQLLKFPTQNGVRVIKGEQKASREGYWTTL
                 F  E                    AYNAI+GR TL+ ++A+TSTYH LLKFPT++G+  ++G+Q A+RE Y  +L
Subjt:  ---------FEPE------------------YRAYNAILGRSTLHDMKAITSTYHQLLKFPTQNGVRVIKGEQKASREGYWTTL

A0A6J1CNT2 uncharacterized protein LOC1110128051.3e-2642.63Show/hide
Query:  AQKYMRAEELLRSKRSEREHKRHSSFDQDRKKDKKQRTYDGGRGRA---HPFGKFEKYTPTAILQDQVLMVIRNTGLLKFLGRMKSNPDKRDKSQHCLFH
        AQ+YM A E   SKR    + + +   ++R  DK Q +    R R+    P  KFEKYT T +  +QVLM I+N  LLK+  RM ++  KR K ++CLFH
Subjt:  AQKYMRAEELLRSKRSEREHKRHSSFDQDRKKDKKQRTYDGGRGRA---HPFGKFEKYTPTAILQDQVLMVIRNTGLLKFLGRMKSNPDKRDKSQHCLFH

Query:  WDHGHSTRNCIQLKDEIEAQIQNGYLKEFVAEVGAEAEADQKWPRPRLTKDVRDKEGPMREIRTIFGGPVGGGSTRKKKVVAREARFEPE
        WDHGH+T++C  LK+E+E  I  GYLKE+V E             P+ T++    + P REIRTI GGP+   S RK+K   REAR   E
Subjt:  WDHGHSTRNCIQLKDEIEAQIQNGYLKEFVAEVGAEAEADQKWPRPRLTKDVRDKEGPMREIRTIFGGPVGGGSTRKKKVVAREARFEPE

A0A6J1CTS4 uncharacterized protein LOC1110141476.0e-2733.98Show/hide
Query:  MVIRNTGLLKFLGRMKSNPDKRDKSQHCLFHWDHGHSTRNCIQLKDEIEAQIQNGYLKEFVAEVGAEAEADQKWPRPRLTKDVRDKEGPMREIRTIFGGP
        M I++  LLK+  RMK+   KR KS++CLFH  HGH+T++C  LK+E+E  I+ GYLKE+V E             P+ T++    + P REIRTI GGP
Subjt:  MVIRNTGLLKFLGRMKSNPDKRDKSQHCLFHWDHGHSTRNCIQLKDEIEAQIQNGYLKEFVAEVGAEAEADQKWPRPRLTKDVRDKEGPMREIRTIFGGP

Query:  VGGGSTRKKKVVAREARFEPE---------------------------YRA-------------------------------------------------
        +   S RK+K   REAR   E                           Y+A                                                 
Subjt:  VGGGSTRKKKVVAREARFEPE---------------------------YRA-------------------------------------------------

Query:  -------YNAILGRSTLHDMKAITSTYHQLLKFPTQNGVRVIKGEQKASREGYWTTLKE
               YNAILGR T+H ++AI STYHQ +KFPT  GV  IKGEQ+ SRE Y+T++++
Subjt:  -------YNAILGRSTLHDMKAITSTYHQLLKFPTQNGVRVIKGEQKASREGYWTTLKE

A0A6J1DWS1 uncharacterized protein LOC1110247912.3e-2635.77Show/hide
Query:  MAQKYMRAEELLRSKRSEREHKRHSSFDQDRKKDKKQRT-----YDGGRGRAHPFGKFEKYTPTAILQDQVLMVIRNTGLLKFLGR---MKSNPDKRDKS
        + +K  R E+ +  K++ +E +R  S  +D+              D G  R+ P   +E+YTPT I   ++L  I  TG+ K L R   ++ + +KR+K 
Subjt:  MAQKYMRAEELLRSKRSEREHKRHSSFDQDRKKDKKQRT-----YDGGRGRAHPFGKFEKYTPTAILQDQVLMVIRNTGLLKFLGR---MKSNPDKRDKS

Query:  QHCLFHWDHGHSTRNCIQLKDEIEAQIQNGYLKEFVAEVGAEAEADQKWPRPRLTKDVRDKEGPMREIRTIFGGPVGGGSTRKKKVVAREARFE-PEY--
        ++C FH DHGH+T +C +LK +IE  IQ+G  K+FV +  +    ++K  R R     R  + P   I TIFGG  GG S  K+K +ARE+R +  E+  
Subjt:  QHCLFHWDHGHSTRNCIQLKDEIEAQIQNGYLKEFVAEVGAEAEADQKWPRPRLTKDVRDKEGPMREIRTIFGGPVGGGSTRKKKVVAREARFE-PEY--

Query:  ----RAYNAILGRSTLHDMKAITSTYHQLLKFPTQNGVRVIKGEQK
             AYNAI GR  +H  +A+ ST HQ+LK+ T NGV  ++  +K
Subjt:  ----RAYNAILGRSTLHDMKAITSTYHQLLKFPTQNGVRVIKGEQK

A0A6J1DWY0 uncharacterized protein LOC1110252931.7e-2643.94Show/hide
Query:  AQKYMRAEELLRSKRSEREHKRHSSFDQDRKKDKKQRTYDGGRGRA---HPFGKFEKYTPTAILQDQVLMVIRNTGLLKFLGRMKSNPDKRDKSQHCLFH
        AQ+YM A E   SKR E + KR +   ++R  DK Q +    R R+    P  KFEKYTPT +  +QVLM I++  LLK+  RMK++  KR K ++CLFH
Subjt:  AQKYMRAEELLRSKRSEREHKRHSSFDQDRKKDKKQRTYDGGRGRA---HPFGKFEKYTPTAILQDQVLMVIRNTGLLKFLGRMKSNPDKRDKSQHCLFH

Query:  WDHGHSTRNCIQLKDEIEAQIQNGYLKEFVAEVGAEAEADQKWPRPRLTKDVRDKEGPMREIRTIFGGPVGGGSTRKKKVVAREARFEPE----YRAY
         DHGH+T++C  LK+E+E  I+ GYLKE+V E             P+ T++    + P REIRTI GGP+   S RK+K   REAR   E    Y AY
Subjt:  WDHGHSTRNCIQLKDEIEAQIQNGYLKEFVAEVGAEAEADQKWPRPRLTKDVRDKEGPMREIRTIFGGPVGGGSTRKKKVVAREARFEPE----YRAY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCCAGAAGTACATGCGCGCGGAAGAGCTATTGAGATCAAAGAGGTCAGAACGAGAGCACAAGAGACATTCCTCATTCGACCAGGACAGGAAGAAGGACAAAAAACA
GCGGACATACGATGGTGGCCGAGGCCGAGCACATCCCTTTGGCAAGTTTGAGAAATACACACCAACTGCTATCCTGCAAGACCAAGTTCTGATGGTGATCCGAAACACGG
GACTTCTTAAATTCCTAGGGAGAATGAAGTCAAATCCCGATAAAAGAGACAAGAGCCAACACTGCCTTTTCCACTGGGACCATGGGCATTCAACCAGAAACTGTATTCAA
TTGAAGGATGAAATTGAGGCGCAAATTCAGAATGGGTATCTGAAGGAGTTTGTCGCTGAAGTAGGGGCCGAGGCCGAGGCCGACCAGAAGTGGCCGAGGCCGAGGCTGAC
CAAAGATGTTCGAGACAAAGAAGGACCCATGCGAGAGATCAGAACTATCTTTGGAGGACCAGTTGGAGGAGGTTCAACTAGGAAAAAGAAAGTTGTTGCCAGAGAAGCAA
GGTTCGAACCAGAATACCGAGCCTACAATGCAATCTTAGGAAGGTCGACCTTGCATGATATGAAAGCCATAACTTCAACTTACCACCAGTTGTTGAAGTTTCCAACTCAG
AATGGTGTAAGAGTCATCAAAGGGGAACAGAAGGCATCAAGGGAGGGTTATTGGACAACACTAAAAGAAGTTAAGCCACTGAAGGCCGAGACCGACCAGAGGATGAACCG
AGGCCGAGCAGAGCACACATGTACCAACACTAAATATGAACTTATGGAGTTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCCCAGAAGTACATGCGCGCGGAAGAGCTATTGAGATCAAAGAGGTCAGAACGAGAGCACAAGAGACATTCCTCATTCGACCAGGACAGGAAGAAGGACAAAAAACA
GCGGACATACGATGGTGGCCGAGGCCGAGCACATCCCTTTGGCAAGTTTGAGAAATACACACCAACTGCTATCCTGCAAGACCAAGTTCTGATGGTGATCCGAAACACGG
GACTTCTTAAATTCCTAGGGAGAATGAAGTCAAATCCCGATAAAAGAGACAAGAGCCAACACTGCCTTTTCCACTGGGACCATGGGCATTCAACCAGAAACTGTATTCAA
TTGAAGGATGAAATTGAGGCGCAAATTCAGAATGGGTATCTGAAGGAGTTTGTCGCTGAAGTAGGGGCCGAGGCCGAGGCCGACCAGAAGTGGCCGAGGCCGAGGCTGAC
CAAAGATGTTCGAGACAAAGAAGGACCCATGCGAGAGATCAGAACTATCTTTGGAGGACCAGTTGGAGGAGGTTCAACTAGGAAAAAGAAAGTTGTTGCCAGAGAAGCAA
GGTTCGAACCAGAATACCGAGCCTACAATGCAATCTTAGGAAGGTCGACCTTGCATGATATGAAAGCCATAACTTCAACTTACCACCAGTTGTTGAAGTTTCCAACTCAG
AATGGTGTAAGAGTCATCAAAGGGGAACAGAAGGCATCAAGGGAGGGTTATTGGACAACACTAAAAGAAGTTAAGCCACTGAAGGCCGAGACCGACCAGAGGATGAACCG
AGGCCGAGCAGAGCACACATGTACCAACACTAAATATGAACTTATGGAGTTTTAG
Protein sequenceShow/hide protein sequence
MAQKYMRAEELLRSKRSEREHKRHSSFDQDRKKDKKQRTYDGGRGRAHPFGKFEKYTPTAILQDQVLMVIRNTGLLKFLGRMKSNPDKRDKSQHCLFHWDHGHSTRNCIQ
LKDEIEAQIQNGYLKEFVAEVGAEAEADQKWPRPRLTKDVRDKEGPMREIRTIFGGPVGGGSTRKKKVVAREARFEPEYRAYNAILGRSTLHDMKAITSTYHQLLKFPTQ
NGVRVIKGEQKASREGYWTTLKEVKPLKAETDQRMNRGRAEHTCTNTKYELMEF