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Lag0018506 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0018506
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionGag/pol protein
Genome locationchr5:28440819..28445534
RNA-Seq ExpressionLag0018506
SyntenyLag0018506
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
InterPro domainsIPR013766 - Thioredoxin domain
IPR036249 - Thioredoxin-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025159.1 gag/pol protein [Cucumis melo var. makuwa]3.2e-0877.78Show/hide
Query:  RNYMLVYGAKDLTLTGYTDTDVLTDKDLMKSTLVFVFTLNGGAIV
        R+YMLVYGAKDL LTGYTD+D  TDKD  KSTL  VFTLNGGA+V
Subjt:  RNYMLVYGAKDLTLTGYTDTDVLTDKDLMKSTLVFVFTLNGGAIV
KAA0049866.1 gag/pol protein [Cucumis melo var. makuwa]7.2e-0878.26Show/hide
Query:  MRNYMLVYGAKDLTLTGYTDTDVLTDKDLMKSTLVFVFTLNGGAIV
        MR+YMLVYGAKDL LTGYTD D  TDKD  KST   VFTLNGGAIV
Subjt:  MRNYMLVYGAKDLTLTGYTDTDVLTDKDLMKSTLVFVFTLNGGAIV
KAA0058361.1 gag/pol protein [Cucumis melo var. makuwa]9.4e-0877.78Show/hide
Query:  RNYMLVYGAKDLTLTGYTDTDVLTDKDLMKSTLVFVFTLNGGAIV
        R+YMLVYGAKDL LTGYTDTD+ T+KD  KST   VFTLNGGAIV
Subjt:  RNYMLVYGAKDLTLTGYTDTDVLTDKDLMKSTLVFVFTLNGGAIV
KAA0059678.1 gag/pol protein [Cucumis melo var. makuwa]7.2e-0875.56Show/hide
Query:  RNYMLVYGAKDLTLTGYTDTDVLTDKDLMKSTLVFVFTLNGGAIV
        R+YMLVYGAKDL LTGYTD+D  TDKD  KST   VFTLNGGA+V
Subjt:  RNYMLVYGAKDLTLTGYTDTDVLTDKDLMKSTLVFVFTLNGGAIV
TYK05759.1 gag/pol protein [Cucumis melo var. makuwa]5.5e-0873.91Show/hide
Query:  MRNYMLVYGAKDLTLTGYTDTDVLTDKDLMKSTLVFVFTLNGGAIV
        MRNYMLVYG+KDL LTGYTD+D  TD+D  KST   VFTLNGGA+V
Subjt:  MRNYMLVYGAKDLTLTGYTDTDVLTDKDLMKSTLVFVFTLNGGAIV
TrEMBL top hitse value%identityAlignment
A0A5A7SIN2 Gag/pol protein1.6e-0877.78Show/hide
Query:  RNYMLVYGAKDLTLTGYTDTDVLTDKDLMKSTLVFVFTLNGGAIV
        R+YMLVYGAKDL LTGYTD+D  TDKD  KSTL  VFTLNGGA+V
Subjt:  RNYMLVYGAKDLTLTGYTDTDVLTDKDLMKSTLVFVFTLNGGAIV
A0A5A7UWW4 Gag/pol protein3.5e-0875.56Show/hide
Query:  RNYMLVYGAKDLTLTGYTDTDVLTDKDLMKSTLVFVFTLNGGAIV
        R+YMLVYGAKDL LTGYTD+D  TDKD  KST   VFTLNGGA+V
Subjt:  RNYMLVYGAKDLTLTGYTDTDVLTDKDLMKSTLVFVFTLNGGAIV
A0A5D3C5V6 Gag/pol protein2.7e-0873.91Show/hide
Query:  MRNYMLVYGAKDLTLTGYTDTDVLTDKDLMKSTLVFVFTLNGGAIV
        MRNYMLVYG+KDL LTGYTD+D  TD+D  KST   VFTLNGGA+V
Subjt:  MRNYMLVYGAKDLTLTGYTDTDVLTDKDLMKSTLVFVFTLNGGAIV
A0A5D3DC34 Gag/pol protein3.5e-0878.26Show/hide
Query:  MRNYMLVYGAKDLTLTGYTDTDVLTDKDLMKSTLVFVFTLNGGAIV
        MR+YMLVYGAKDL LTGYTD D  TDKD  KST   VFTLNGGAIV
Subjt:  MRNYMLVYGAKDLTLTGYTDTDVLTDKDLMKSTLVFVFTLNGGAIV
A0A5D3DIF4 Gag/pol protein4.5e-0877.78Show/hide
Query:  RNYMLVYGAKDLTLTGYTDTDVLTDKDLMKSTLVFVFTLNGGAIV
        R+YMLVYGAKDL LTGYTDTD+ T+KD  KST   VFTLNGGAIV
Subjt:  RNYMLVYGAKDLTLTGYTDTDVLTDKDLMKSTLVFVFTLNGGAIV
SwissProt top hitse value%identityAlignment
A2YIW7 Thioredoxin H-type7.0e-0657.5Show/hide
Query:  IVVDFITTWCSPCRAIVAVFAELDKKMKNAIILKVDVDEL
        +++DF  +WC PCR I  VFAE  KK   A+ LKVDVDEL
Subjt:  IVVDFITTWCSPCRAIVAVFAELDKKMKNAIILKVDVDEL
P29448 Thioredoxin H11.2e-0557.5Show/hide
Query:  IVVDFITTWCSPCRAIVAVFAELDKKMKNAIILKVDVDEL
        +VVDF  +WC PCR I   FA+L KK+ N + LKVD DEL
Subjt:  IVVDFITTWCSPCRAIVAVFAELDKKMKNAIILKVDVDEL
P29449 Thioredoxin H-type 11.2e-0557.5Show/hide
Query:  IVVDFITTWCSPCRAIVAVFAELDKKMKNAIILKVDVDEL
        +VVDF  +WC PCR I  + A++ KKM + I LKVDVDEL
Subjt:  IVVDFITTWCSPCRAIVAVFAELDKKMKNAIILKVDVDEL
Q0D840 Thioredoxin H17.0e-0657.5Show/hide
Query:  IVVDFITTWCSPCRAIVAVFAELDKKMKNAIILKVDVDEL
        +++DF  +WC PCR I  VFAE  KK   A+ LKVDVDEL
Subjt:  IVVDFITTWCSPCRAIVAVFAELDKKMKNAIILKVDVDEL
Q39241 Thioredoxin H55.3e-0657.5Show/hide
Query:  IVVDFITTWCSPCRAIVAVFAELDKKMKNAIILKVDVDEL
        IV+DF  +WC PCR I  VFAE+ KK  N +  K+DVDEL
Subjt:  IVVDFITTWCSPCRAIVAVFAELDKKMKNAIILKVDVDEL
Arabidopsis top hitse value%identityAlignment
AT1G45145.1 thioredoxin H-type 53.8e-0757.5Show/hide
Query:  IVVDFITTWCSPCRAIVAVFAELDKKMKNAIILKVDVDEL
        IV+DF  +WC PCR I  VFAE+ KK  N +  K+DVDEL
Subjt:  IVVDFITTWCSPCRAIVAVFAELDKKMKNAIILKVDVDEL
AT3G51030.1 thioredoxin H-type 18.4e-0757.5Show/hide
Query:  IVVDFITTWCSPCRAIVAVFAELDKKMKNAIILKVDVDEL
        +VVDF  +WC PCR I   FA+L KK+ N + LKVD DEL
Subjt:  IVVDFITTWCSPCRAIVAVFAELDKKMKNAIILKVDVDEL
AT5G42980.1 thioredoxin 31.1e-0660Show/hide
Query:  IVVDFITTWCSPCRAIVAVFAELDKKMKNAIILKVDVDEL
        IV+DF  TWC PCR I  VFA+L KK  + +  KVDVDEL
Subjt:  IVVDFITTWCSPCRAIVAVFAELDKKMKNAIILKVDVDEL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAAACTATATGCTCGTGTATGGTGCTAAGGATTTGACCCTTACAGGATACACTGACACAGATGTTTTAACTGATAAGGATTTGATGAAATCTACATTAGTGTTTGT
CTTCACTCTTAATGGAGGAGCTATAGTACGACTTATCTGCAATCTCAACCATATAGTAGCCACCAGCCCCCCTGCCGTGAGTTCAACTACCGTTGTCACCCTCCACAGCC
GGAGAAGTTGCCGCCCAGTTGGAGCAACCCACAGTCGTTCACACCCCTCTCTTTCTCTTCGTTTCCGTGAGAAAACCCGTCGCCTCTATTCCTTCTTCCTTCGTCGCGCC
GTCGTCGCCGCCCTTCTTTTTCTCCCTCTCTTCGTGATGTCGATTAGCTACGAGAAAACCCAAAGCTCGAGTTTTCTTCTCTGTTTCTCGCACGTTACGGATCCGACATT
GCACATCTGTTCCAGTGTGTTGGGCTCTTCAACGTGTGTTTGGACTCAAAATGGTGTTCAGCGAATACCCACAACTTGGAAGGCCTTGTATTGGGTTACCCATAACCCGA
CGACATGGGACCTTGGTTGTCGAATGGCTTCAAACACAAACGAGCACATATTCAAGGCCATTTGGGTGTTTATCAGCCACTTTGGAGCGTTTGAATCAAGCTTAAGGGTC
CTATTCGGAGATTGTTGGATCATTTTAGGAGCGACTCTTGATCTATTTAGGAGTGTTTTAGCTTGTGCCTTTGCCCTAACAATTCCTCTTCTTCTTCTTCGTCCTCCTTC
TTCTCCAATTCGCATTTTCGTCACTGCCTCTGTCTCTTCCCCGTCTCTCGTGTTTCCAACCGTTTCTGCGTATCAGATTGTTGTGGACTTCATTACTACGTGGTGCAGTC
CATGTCGTGCCATAGTTGCAGTTTTTGCAGAGTTGGATAAGAAGATGAAAAATGCCATAATCTTGAAGGTCGATGTTGATGAATTGGTTGTTAAGTTGATTGGAGCCCTA
TCCTATAAAACTTCTGTATTGTTAATTGAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGAAACTATATGCTCGTGTATGGTGCTAAGGATTTGACCCTTACAGGATACACTGACACAGATGTTTTAACTGATAAGGATTTGATGAAATCTACATTAGTGTTTGT
CTTCACTCTTAATGGAGGAGCTATAGTACGACTTATCTGCAATCTCAACCATATAGTAGCCACCAGCCCCCCTGCCGTGAGTTCAACTACCGTTGTCACCCTCCACAGCC
GGAGAAGTTGCCGCCCAGTTGGAGCAACCCACAGTCGTTCACACCCCTCTCTTTCTCTTCGTTTCCGTGAGAAAACCCGTCGCCTCTATTCCTTCTTCCTTCGTCGCGCC
GTCGTCGCCGCCCTTCTTTTTCTCCCTCTCTTCGTGATGTCGATTAGCTACGAGAAAACCCAAAGCTCGAGTTTTCTTCTCTGTTTCTCGCACGTTACGGATCCGACATT
GCACATCTGTTCCAGTGTGTTGGGCTCTTCAACGTGTGTTTGGACTCAAAATGGTGTTCAGCGAATACCCACAACTTGGAAGGCCTTGTATTGGGTTACCCATAACCCGA
CGACATGGGACCTTGGTTGTCGAATGGCTTCAAACACAAACGAGCACATATTCAAGGCCATTTGGGTGTTTATCAGCCACTTTGGAGCGTTTGAATCAAGCTTAAGGGTC
CTATTCGGAGATTGTTGGATCATTTTAGGAGCGACTCTTGATCTATTTAGGAGTGTTTTAGCTTGTGCCTTTGCCCTAACAATTCCTCTTCTTCTTCTTCGTCCTCCTTC
TTCTCCAATTCGCATTTTCGTCACTGCCTCTGTCTCTTCCCCGTCTCTCGTGTTTCCAACCGTTTCTGCGTATCAGATTGTTGTGGACTTCATTACTACGTGGTGCAGTC
CATGTCGTGCCATAGTTGCAGTTTTTGCAGAGTTGGATAAGAAGATGAAAAATGCCATAATCTTGAAGGTCGATGTTGATGAATTGGTTGTTAAGTTGATTGGAGCCCTA
TCCTATAAAACTTCTGTATTGTTAATTGAGTGA
Protein sequenceShow/hide protein sequence
MRNYMLVYGAKDLTLTGYTDTDVLTDKDLMKSTLVFVFTLNGGAIVRLICNLNHIVATSPPAVSSTTVVTLHSRRSCRPVGATHSRSHPSLSLRFREKTRRLYSFFLRRA
VVAALLFLPLFVMSISYEKTQSSSFLLCFSHVTDPTLHICSSVLGSSTCVWTQNGVQRIPTTWKALYWVTHNPTTWDLGCRMASNTNEHIFKAIWVFISHFGAFESSLRV
LFGDCWIILGATLDLFRSVLACAFALTIPLLLLRPPSSPIRIFVTASVSSPSLVFPTVSAYQIVVDFITTWCSPCRAIVAVFAELDKKMKNAIILKVDVDELVVKLIGAL
SYKTSVLLIE