; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0018513 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0018513
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr5:28592175..28592981
RNA-Seq ExpressionLag0018513
SyntenyLag0018513
Gene Ontology termsNA
InterPro domainsIPR025558 - Domain of unknown function DUF4283
IPR025836 - Zinc knuckle CX2CX4HX4C
IPR040256 - Uncharacterized protein At4g02000-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022132681.1 uncharacterized protein LOC111005481 [Momordica charantia]5.0e-4941.74Show/hide
Query:  MLENWDRFNLTIEEEETEIDVDRQAAAITSRSLGFSLFGKLLAPRVIARDVMRRNFKAAWNIP-SGLTVEKVGKNIFLFTLKSKEEQTRVLRQGPSLFDR
        +LE W  F LT EE++  +D+D  A   T + L  SL  KLL+ R I+  V++   K AW +     +V+ +G NIFLF      ++ R+LR GP  FDR
Subjt:  MLENWDRFNLTIEEEETEIDVDRQAAAITSRSLGFSLFGKLLAPRVIARDVMRRNFKAAWNIP-SGLTVEKVGKNIFLFTLKSKEEQTRVLRQGPSLFDR

Query:  FLLVLSKHIPMVKPSAMEFKYVMFWVHFCDLPMDVYNISTAERLGNTIGKFEAFDSGNRGLGWKESLQVRVTLDITKPQRRCIKVNLDDPMGSCWTPIRY
         L+++   + + KP  M+F+ V  WVHF DL +   N + A RLGN IG FE  +S      W   L+VRV  D+ KP  R IK+NLD PMG CW PI+Y
Subjt:  FLLVLSKHIPMVKPSAMEFKYVMFWVHFCDLPMDVYNISTAERLGNTIGKFEAFDSGNRGLGWKESLQVRVTLDITKPQRRCIKVNLDDPMGSCWTPIRY

Query:  EKLPDLCSYCGIIGHSSKECSVFLFADGPSSLKQQYGPWMQF
        E+LPD   +CG + H  K+CS         +L  QYGPW++F
Subjt:  EKLPDLCSYCGIIGHSSKECSVFLFADGPSSLKQQYGPWMQF

XP_022156185.1 uncharacterized protein LOC111023135 [Momordica charantia]9.8e-6147.11Show/hide
Query:  MLENWDRFNLTIEEEETEIDVDRQAAAITSRSLGFSLFGKLLAPRVIARDVMRRNFKAAWNIPSGLTVEKVGKNIFLFTLKSKEEQTRVLRQGPSLFDRF
        +L +W +F LT EE+E  +DVD  A  +  + L +SL GKLLA R+I+ DV+ R    AW +   LTVE +GKN+FLF    + +  RV++ GP  FD+ 
Subjt:  MLENWDRFNLTIEEEETEIDVDRQAAAITSRSLGFSLFGKLLAPRVIARDVMRRNFKAAWNIPSGLTVEKVGKNIFLFTLKSKEEQTRVLRQGPSLFDRF

Query:  LLVLSKHIPMVKPSAMEFKYVMFWVHFCDLPMDVYNISTAERLGNTIGKFEAFDSGNRGLGWKESLQVRVTLDITKPQRRCIKVNLDDPMGSCWTPIRYE
        L+VL K       S +EF  V FW+H  DLPM   N + A RLGN IG F   D   +G  W  SL++RV +DITKP RR IK+N+D PMG CW PI+YE
Subjt:  LLVLSKHIPMVKPSAMEFKYVMFWVHFCDLPMDVYNISTAERLGNTIGKFEAFDSGNRGLGWKESLQVRVTLDITKPQRRCIKVNLDDPMGSCWTPIRYE

Query:  KLPDLCSYCGIIGHSSKECSV-FLFADGPSSLKQQYGPWMQF
        +LPD C +CG+IGHSS +C   +L A   S    +YGPW++F
Subjt:  KLPDLCSYCGIIGHSSKECSV-FLFADGPSSLKQQYGPWMQF

XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]2.9e-4438.01Show/hide
Query:  MLENWDRFNLTIEEEETEIDVDRQAAAITSRSLGFSLFGKLLAPRVIARDVMRRNFKAAWNIP-SGLTVEKVGKNIFLFTLKSKEEQTRVLRQGPSLFDR
        +LE W  F LT EEEET IDVD  A A T   L   L GKL   R I   VM+   + AW +  +   V+ +G N+FLF+     ++ ++ + GP  FDR
Subjt:  MLENWDRFNLTIEEEETEIDVDRQAAAITSRSLGFSLFGKLLAPRVIARDVMRRNFKAAWNIP-SGLTVEKVGKNIFLFTLKSKEEQTRVLRQGPSLFDR

Query:  FLLVLSKHIPMVKPSAMEFKYVMFWVHFCDLPMDVYNISTAERLGNTIGKFEAFDSGNRGLGWKESLQVRVTLDITKPQRRCIKVNLDDPMGSCWTPIRY
         L++++K + ++ PS ++F  +  WV F DLP+       A RLGN +G FE  D  +    W  +L+VRV LDI+KP RR IK+NLD P+G  W PI+Y
Subjt:  FLLVLSKHIPMVKPSAMEFKYVMFWVHFCDLPMDVYNISTAERLGNTIGKFEAFDSGNRGLGWKESLQVRVTLDITKPQRRCIKVNLDDPMGSCWTPIRY

Query:  EKLPDLCSYCGIIGHSSKECSVFLFADGPSSLKQQYGPWMQFS---RRTSTMYRSPSNNPLSKNKMVSNSS
        E+LPD C +CG+                 S  K QYG W+++    + T    + P  + L K+   S SS
Subjt:  EKLPDLCSYCGIIGHSSKECSVFLFADGPSSLKQQYGPWMQFS---RRTSTMYRSPSNNPLSKNKMVSNSS

XP_028122006.1 uncharacterized protein LOC114319195 [Camellia sinensis]1.6e-3434.21Show/hide
Query:  EEETEIDVDRQAAAITSRSLGFSLFGKLLAPRVIARDVMRRNFKAAWNIPSGLTVEKVGKNIFLFTLKSKEEQTRVLRQGPSLFDRFLLVLSKHIPMVKP
        EE+  + +  ++ ++        L GKLL  R    + M+    + W    G+ V  +G N+F+F      ++ RVL  GP  FD+ LL+L +  P V+P
Subjt:  EEETEIDVDRQAAAITSRSLGFSLFGKLLAPRVIARDVMRRNFKAAWNIPSGLTVEKVGKNIFLFTLKSKEEQTRVLRQGPSLFDRFLLVLSKHIPMVKP

Query:  SAMEFKYVMFWVHFCDLPMDVYNISTAERLGNTIGKFEAFDSGNRGLGWKESLQVRVTLDITKPQRRCIKVNLDDPMGSCWTPIRYEKLPDLCSYCGIIG
        S ++   V FWVH C+LP+ + N    E +GN +G+F   D  + G+ W  ++++RV LD+ KP RR +K+ L       W   +YE+LP  C +CG +G
Subjt:  SAMEFKYVMFWVHFCDLPMDVYNISTAERLGNTIGKFEAFDSGNRGLGWKESLQVRVTLDITKPQRRCIKVNLDDPMGSCWTPIRYEKLPDLCSYCGIIG

Query:  HSSKECSVFL-FADGPSSLKQQYGPWMQ
        HS +EC   L  ADG      QYG W++
Subjt:  HSSKECSVFL-FADGPSSLKQQYGPWMQ

XP_028124075.1 uncharacterized protein LOC114321128 [Camellia sinensis]3.2e-3534.35Show/hide
Query:  EEETEIDVDRQAAAITSRSLGFSLFGKLLAPRVIARDVMRRNFKAAWNIPSGLTVEKVGKNIFLFTLKSKEEQTRVLRQGPSLFDRFLLVLSKHIPMVKP
        EE+  + +   + ++        L GKLL  R    + M+    + W    G+ V  +G N+F+F      ++ RVL  GP  FD+ LL+L +  P V+P
Subjt:  EEETEIDVDRQAAAITSRSLGFSLFGKLLAPRVIARDVMRRNFKAAWNIPSGLTVEKVGKNIFLFTLKSKEEQTRVLRQGPSLFDRFLLVLSKHIPMVKP

Query:  SAMEFKYVMFWVHFCDLPMDVYNISTAERLGNTIGKFEAFDSGNRGLGWKESLQVRVTLDITKPQRRCIKVNLD--DPMGSCWTPIRYEKLPDLCSYCGI
        S ++   V FWVH C+LP+ + N    + +GN +G+F   D  + G+ W  ++++RV +D+ KP RR +K+ L   DP+   W   +YE+LP  C +CG 
Subjt:  SAMEFKYVMFWVHFCDLPMDVYNISTAERLGNTIGKFEAFDSGNRGLGWKESLQVRVTLDITKPQRRCIKVNLD--DPMGSCWTPIRYEKLPDLCSYCGI

Query:  IGHSSKECSVFL-FADGPSSLKQQYGPWMQ
        +GHS +EC   L FADG      QYG W++
Subjt:  IGHSSKECSVFL-FADGPSSLKQQYGPWMQ

TrEMBL top hitse value%identityAlignment
A0A2N9FJK9 CCHC-type domain-containing protein1.1e-3332.93Show/hide
Query:  MLENWDRFNLTIEEEETEIDVDRQAAAITSRSLGFSLFGKLLAPRVIARDVMRRNFKAAWNIPSGLTVEKVGKNIFLFTLKSKEEQTRVLRQGPSLFDRF
        ++E+W RF+LT E+E     +  +A   +       L GKLL  +   +  ++      W   SG+  + +G+N+FLF  ++  +  RVL   P LFD  
Subjt:  MLENWDRFNLTIEEEETEIDVDRQAAAITSRSLGFSLFGKLLAPRVIARDVMRRNFKAAWNIPSGLTVEKVGKNIFLFTLKSKEEQTRVLRQGPSLFDRF

Query:  LLVLSKHIPMVKPSAMEFKYVMFWVHFCDLPMDVYNISTAERLGNTIGKFEAFDSGNRGLGWKESLQVRVTLDITKPQRRCIKVNLDDPMGSCWTPIRYE
        LLVL+        + + F +  FWV F  +P+      T ERLG  IG  E  D    G+GW   L+VR++LD+TKP +R   +      G  W   +YE
Subjt:  LLVLSKHIPMVKPSAMEFKYVMFWVHFCDLPMDVYNISTAERLGNTIGKFEAFDSGNRGLGWKESLQVRVTLDITKPQRRCIKVNLDDPMGSCWTPIRYE

Query:  KLPDLCSYCGIIGHSSKECSVFLFADGPSSLK-QQYGPWMQFSRRT
        +LP LC +CG +GH  +EC + + + G  S + + YGPW++ S  +
Subjt:  KLPDLCSYCGIIGHSSKECSVFLFADGPSSLK-QQYGPWMQFSRRT

A0A2N9GWE9 Uncharacterized protein5.5e-3333.33Show/hide
Query:  MLENWDRFNLTIEEEETEIDVDRQAAAITSRSLGFSLFGKLLAPRVIARDVMRRNFKAAW-NIPSGLTVEKVGKNIFLFTLKSKEEQTRVLRQGPSLFDR
        ++E W +F+LT E E   + +   A  ++       L GKL   +   R+ ++      W  +  G+T   +G+N+F+F  +   E+ RV+   P LFD 
Subjt:  MLENWDRFNLTIEEEETEIDVDRQAAAITSRSLGFSLFGKLLAPRVIARDVMRRNFKAAW-NIPSGLTVEKVGKNIFLFTLKSKEEQTRVLRQGPSLFDR

Query:  FLLVLSKHIPMVKPSAMEFKYVMFWVHFCDLPMDVYNISTAERLGNTIGKFEAFDSGNRGLGWKESLQVRVTLDITKPQRRCIKVNLDDPMGSCWTPIRY
         LL+L +       S ++F +  FWV F  +P+      T E++G+  GK E  D    G+GW   L+VR+ LDITKP  R   V  +  +G  W   +Y
Subjt:  FLLVLSKHIPMVKPSAMEFKYVMFWVHFCDLPMDVYNISTAERLGNTIGKFEAFDSGNRGLGWKESLQVRVTLDITKPQRRCIKVNLDDPMGSCWTPIRY

Query:  EKLPDLCSYCGIIGHSSKECSVFLFADGPSSL--KQQYGPWMQFSRRTS
        E+LP LC +CG+IGH  ++C V    +  SS    QQYGPW++ S   S
Subjt:  EKLPDLCSYCGIIGHSSKECSVFLFADGPSSL--KQQYGPWMQFSRRTS

A0A6J1BSZ1 uncharacterized protein LOC1110054812.4e-4941.74Show/hide
Query:  MLENWDRFNLTIEEEETEIDVDRQAAAITSRSLGFSLFGKLLAPRVIARDVMRRNFKAAWNIP-SGLTVEKVGKNIFLFTLKSKEEQTRVLRQGPSLFDR
        +LE W  F LT EE++  +D+D  A   T + L  SL  KLL+ R I+  V++   K AW +     +V+ +G NIFLF      ++ R+LR GP  FDR
Subjt:  MLENWDRFNLTIEEEETEIDVDRQAAAITSRSLGFSLFGKLLAPRVIARDVMRRNFKAAWNIP-SGLTVEKVGKNIFLFTLKSKEEQTRVLRQGPSLFDR

Query:  FLLVLSKHIPMVKPSAMEFKYVMFWVHFCDLPMDVYNISTAERLGNTIGKFEAFDSGNRGLGWKESLQVRVTLDITKPQRRCIKVNLDDPMGSCWTPIRY
         L+++   + + KP  M+F+ V  WVHF DL +   N + A RLGN IG FE  +S      W   L+VRV  D+ KP  R IK+NLD PMG CW PI+Y
Subjt:  FLLVLSKHIPMVKPSAMEFKYVMFWVHFCDLPMDVYNISTAERLGNTIGKFEAFDSGNRGLGWKESLQVRVTLDITKPQRRCIKVNLDDPMGSCWTPIRY

Query:  EKLPDLCSYCGIIGHSSKECSVFLFADGPSSLKQQYGPWMQF
        E+LPD   +CG + H  K+CS         +L  QYGPW++F
Subjt:  EKLPDLCSYCGIIGHSSKECSVFLFADGPSSLKQQYGPWMQF

A0A6J1DU55 uncharacterized protein LOC1110231354.7e-6147.11Show/hide
Query:  MLENWDRFNLTIEEEETEIDVDRQAAAITSRSLGFSLFGKLLAPRVIARDVMRRNFKAAWNIPSGLTVEKVGKNIFLFTLKSKEEQTRVLRQGPSLFDRF
        +L +W +F LT EE+E  +DVD  A  +  + L +SL GKLLA R+I+ DV+ R    AW +   LTVE +GKN+FLF    + +  RV++ GP  FD+ 
Subjt:  MLENWDRFNLTIEEEETEIDVDRQAAAITSRSLGFSLFGKLLAPRVIARDVMRRNFKAAWNIPSGLTVEKVGKNIFLFTLKSKEEQTRVLRQGPSLFDRF

Query:  LLVLSKHIPMVKPSAMEFKYVMFWVHFCDLPMDVYNISTAERLGNTIGKFEAFDSGNRGLGWKESLQVRVTLDITKPQRRCIKVNLDDPMGSCWTPIRYE
        L+VL K       S +EF  V FW+H  DLPM   N + A RLGN IG F   D   +G  W  SL++RV +DITKP RR IK+N+D PMG CW PI+YE
Subjt:  LLVLSKHIPMVKPSAMEFKYVMFWVHFCDLPMDVYNISTAERLGNTIGKFEAFDSGNRGLGWKESLQVRVTLDITKPQRRCIKVNLDDPMGSCWTPIRYE

Query:  KLPDLCSYCGIIGHSSKECSV-FLFADGPSSLKQQYGPWMQF
        +LPD C +CG+IGHSS +C   +L A   S    +YGPW++F
Subjt:  KLPDLCSYCGIIGHSSKECSV-FLFADGPSSLKQQYGPWMQF

A0A6J1DX30 uncharacterized protein LOC1110248741.4e-4438.01Show/hide
Query:  MLENWDRFNLTIEEEETEIDVDRQAAAITSRSLGFSLFGKLLAPRVIARDVMRRNFKAAWNIP-SGLTVEKVGKNIFLFTLKSKEEQTRVLRQGPSLFDR
        +LE W  F LT EEEET IDVD  A A T   L   L GKL   R I   VM+   + AW +  +   V+ +G N+FLF+     ++ ++ + GP  FDR
Subjt:  MLENWDRFNLTIEEEETEIDVDRQAAAITSRSLGFSLFGKLLAPRVIARDVMRRNFKAAWNIP-SGLTVEKVGKNIFLFTLKSKEEQTRVLRQGPSLFDR

Query:  FLLVLSKHIPMVKPSAMEFKYVMFWVHFCDLPMDVYNISTAERLGNTIGKFEAFDSGNRGLGWKESLQVRVTLDITKPQRRCIKVNLDDPMGSCWTPIRY
         L++++K + ++ PS ++F  +  WV F DLP+       A RLGN +G FE  D  +    W  +L+VRV LDI+KP RR IK+NLD P+G  W PI+Y
Subjt:  FLLVLSKHIPMVKPSAMEFKYVMFWVHFCDLPMDVYNISTAERLGNTIGKFEAFDSGNRGLGWKESLQVRVTLDITKPQRRCIKVNLDDPMGSCWTPIRY

Query:  EKLPDLCSYCGIIGHSSKECSVFLFADGPSSLKQQYGPWMQFS---RRTSTMYRSPSNNPLSKNKMVSNSS
        E+LPD C +CG+                 S  K QYG W+++    + T    + P  + L K+   S SS
Subjt:  EKLPDLCSYCGIIGHSSKECSVFLFADGPSSLKQQYGPWMQFS---RRTSTMYRSPSNNPLSKNKMVSNSS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G31430.1 unknown protein1.7e-1026.18Show/hide
Query:  FSLFGKLLAPRVIARDVMRRNFKAAWNIPSGLTVEKV--GKNI-FLFTLKSKEEQTRVLRQGPSLFDRFLLVLSKHIPMVKPSAMEFKYVMFWVHFCDLP
        F LFG+ + PR      +  +    W   SGL   ++  G+   F+FTL  +E    VLR+GP  F+ ++++L +  P +      F ++ FWV    +P
Subjt:  FSLFGKLLAPRVIARDVMRRNFKAAWNIPSGLTVEKV--GKNI-FLFTLKSKEEQTRVLRQGPSLFDRFLLVLSKHIPMVKPSAMEFKYVMFWVHFCDLP

Query:  MDVYNISTAERLGNTIGKFEAFDSGNRGLGWKESLQVRVTLDITKPQRRCIKVNLDDPMG-SCWTPIRYEKLPDLCSYCGIIGHSSKECSV
            N    E +G  +G+    D     +   +  +V +  DIT P R   + +     G +     RYE+L   C  CG++ H    C +
Subjt:  MDVYNISTAERLGNTIGKFEAFDSGNRGLGWKESLQVRVTLDITKPQRRCIKVNLDDPMG-SCWTPIRYEKLPDLCSYCGIIGHSSKECSV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTGAAAATTGGGATCGCTTTAATCTTACGATTGAGGAAGAAGAAACTGAAATCGACGTTGATCGGCAAGCGGCAGCAATCACAAGCAGATCTCTGGGTTTCTCTCT
TTTTGGAAAGCTACTAGCTCCTAGAGTCATCGCTAGAGATGTCATGCGCAGAAATTTTAAGGCTGCTTGGAACATTCCTAGCGGTCTTACAGTCGAAAAGGTGGGGAAAA
ACATCTTCTTATTCACCTTAAAATCCAAAGAAGAGCAAACCCGTGTCTTACGTCAAGGTCCTTCATTATTCGATCGATTTCTGCTCGTGTTATCCAAGCACATTCCCATG
GTCAAACCGTCCGCGATGGAATTCAAATACGTCATGTTTTGGGTGCATTTTTGTGATCTTCCGATGGATGTGTATAACATCTCAACAGCTGAAAGACTTGGAAACACTAT
TGGAAAATTTGAAGCTTTTGATTCCGGTAACAGAGGACTTGGTTGGAAGGAGAGTCTCCAAGTTCGCGTTACACTGGATATTACTAAGCCACAACGTCGATGCATCAAAG
TGAACCTTGATGATCCAATGGGAAGCTGTTGGACCCCTATTAGGTATGAAAAACTTCCTGATTTATGCTCTTATTGTGGTATAATTGGACATTCTTCCAAAGAGTGCAGT
GTTTTCCTTTTCGCGGATGGACCATCTTCTTTAAAGCAACAGTATGGACCTTGGATGCAATTTTCTCGACGAACTTCAACCATGTACCGGTCACCAAGCAACAACCCATT
AAGCAAGAATAAGATGGTTTCGAATTCATCTGTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGCTTGAAAATTGGGATCGCTTTAATCTTACGATTGAGGAAGAAGAAACTGAAATCGACGTTGATCGGCAAGCGGCAGCAATCACAAGCAGATCTCTGGGTTTCTCTCT
TTTTGGAAAGCTACTAGCTCCTAGAGTCATCGCTAGAGATGTCATGCGCAGAAATTTTAAGGCTGCTTGGAACATTCCTAGCGGTCTTACAGTCGAAAAGGTGGGGAAAA
ACATCTTCTTATTCACCTTAAAATCCAAAGAAGAGCAAACCCGTGTCTTACGTCAAGGTCCTTCATTATTCGATCGATTTCTGCTCGTGTTATCCAAGCACATTCCCATG
GTCAAACCGTCCGCGATGGAATTCAAATACGTCATGTTTTGGGTGCATTTTTGTGATCTTCCGATGGATGTGTATAACATCTCAACAGCTGAAAGACTTGGAAACACTAT
TGGAAAATTTGAAGCTTTTGATTCCGGTAACAGAGGACTTGGTTGGAAGGAGAGTCTCCAAGTTCGCGTTACACTGGATATTACTAAGCCACAACGTCGATGCATCAAAG
TGAACCTTGATGATCCAATGGGAAGCTGTTGGACCCCTATTAGGTATGAAAAACTTCCTGATTTATGCTCTTATTGTGGTATAATTGGACATTCTTCCAAAGAGTGCAGT
GTTTTCCTTTTCGCGGATGGACCATCTTCTTTAAAGCAACAGTATGGACCTTGGATGCAATTTTCTCGACGAACTTCAACCATGTACCGGTCACCAAGCAACAACCCATT
AAGCAAGAATAAGATGGTTTCGAATTCATCTGTCTGA
Protein sequenceShow/hide protein sequence
MLENWDRFNLTIEEEETEIDVDRQAAAITSRSLGFSLFGKLLAPRVIARDVMRRNFKAAWNIPSGLTVEKVGKNIFLFTLKSKEEQTRVLRQGPSLFDRFLLVLSKHIPM
VKPSAMEFKYVMFWVHFCDLPMDVYNISTAERLGNTIGKFEAFDSGNRGLGWKESLQVRVTLDITKPQRRCIKVNLDDPMGSCWTPIRYEKLPDLCSYCGIIGHSSKECS
VFLFADGPSSLKQQYGPWMQFSRRTSTMYRSPSNNPLSKNKMVSNSSV