; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0018530 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0018530
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr5:29010867..29011672
RNA-Seq ExpressionLag0018530
SyntenyLag0018530
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN63284.1 hypothetical protein VITISV_028951, partial [Vitis vinifera]3.6e-2131.8Show/hide
Query:  PDLNFEQNNKFFRNKQYDGSSIYVWNLDGMSERQIMNMLTEMLIASATYQENSN-SNHTSAGMIINGFSGTLKAWWE-CLDPSLRNEIKTTKPRIRSNTC
        PD+ FE+ N+ +    Y   +IY WN+DGM+E  I+  L EM + S TY+ N+   NH  A  I+ GF+G LK WW+  L    RN I     RI  N+ 
Subjt:  PDLNFEQNNKFFRNKQYDGSSIYVWNLDGMSERQIMNMLTEMLIASATYQENSN-SNHTSAGMIINGFSGTLKAWWE-CLDPSLRNEIKTTKPRIRSNTC

Query:  KKETPKTVTIEEEVEMEDAVETLVYAISWNF---TTAHSSKYTDIQRVWYMPDVH----------------------HWKERFIDGLPSYVAERVYMALC
             + V  E+  ++E+AV TL+Y+IS +F         K  D+      P +H                       WKE+FI GLP   +ER+ + + 
Subjt:  KKETPKTVTIEEEVEMEDAVETLVYAISWNF---TTAHSSKYTDIQRVWYMPDVH----------------------HWKERFIDGLPSYVAERVYMALC

Query:  ERFDGEIKWIDLTFGDLMSYVINCGLQSAMRSKFREKFK
        E+++G+I +  LT+G+++S V   G++     K +++ K
Subjt:  ERFDGEIKWIDLTFGDLMSYVINCGLQSAMRSKFREKFK

KAF5803680.1 putative transcription factor interactor and regulator CCHC(Zn) family [Helianthus annuus]1.7e-2332.22Show/hide
Query:  PDLNFEQNNKFFRNKQYDGSSIYVWNLDGMSERQIMNMLTEMLIASATYQENSNSNHTSAGMIINGFSGTLKAWWE-CLDPSLRNEIKTTKPRIRSNTCK
        PDL FE+ +   + K YDG+S+Y WN++G +E QI+N+L EM++A+  Y+ N N+      MI++GF+G LK WW+ CL    ++ I+  K  I      
Subjt:  PDLNFEQNNKFFRNKQYDGSSIYVWNLDGMSERQIMNMLTEMLIASATYQENSNSNHTSAGMIINGFSGTLKAWWE-CLDPSLRNEIKTTKPRIRSNTCK

Query:  KETPKTVTIEEEVEMEDAVETLVYAISWNF---TTAHSSK------------------YTDI--QRVWYMPDV--HHWKERFIDGLPSYVAERVYMALCE
         + P         E  D + TL++AI  +F    T +  +                  Y D+   +V    D    +WKERFI GLP   AER+   + +
Subjt:  KETPKTVTIEEEVEMEDAVETLVYAISWNF---TTAHSSK------------------YTDI--QRVWYMPDV--HHWKERFIDGLPSYVAERVYMALCE

Query:  RFDGEIKWIDLTFGDLMSYVINCGLQSAMRSKFREKFKR
         F+  I + DL++G +++Y+   GL+     K +EK KR
Subjt:  RFDGEIKWIDLTFGDLMSYVINCGLQSAMRSKFREKFKR

XP_016540640.1 PREDICTED: uncharacterized protein LOC107841160 [Capsicum annuum]2.8e-2130.71Show/hide
Query:  PDLNFEQNNKFFRNKQYDGSSIYVWNLDGMSERQIMNMLTEMLIASATYQENSNSNHTSAGMIINGFSGTLKAWWECLDPSLRNEIKTTKPRIRSNTCKK
        PD+ FE+ N +     +DG  I  WN+DG++E QI N L E+ +A   Y+   +S+  +A M+++GF+G LK WW+          +  K  I + T  +
Subjt:  PDLNFEQNNKFFRNKQYDGSSIYVWNLDGMSERQIMNMLTEMLIASATYQENSNSNHTSAGMIINGFSGTLKAWWECLDPSLRNEIKTTKPRIRSNTCKK

Query:  ETPKTVTIEE---EVEMEDAVETLVYAISWNFTTAHS-----------------------SKYTDIQRVWYMPDVHH--WKERFIDGLPSYVAERVYMAL
        +  +TV  +E   +   EDA  TL+Y I+ +F                             K T + +V   PD ++  WKERFI GLP   A++V   L
Subjt:  ETPKTVTIEE---EVEMEDAVETLVYAISWNFTTAHS-----------------------SKYTDIQRVWYMPDVHH--WKERFIDGLPSYVAERVYMAL

Query:  CERFDGEIKWIDLTFGDLMSYVINCGLQSAMRSKFREKFKR
         +RF+G+I +  LT+GDL+S++   G++     K +++ K+
Subjt:  CERFDGEIKWIDLTFGDLMSYVINCGLQSAMRSKFREKFKR

XP_016549849.1 PREDICTED: uncharacterized protein LOC107849771, partial [Capsicum annuum]2.1e-2131.54Show/hide
Query:  PDLNFEQNNKFFRNKQYDGSSIYVWNLDGMSERQIMNMLTEMLIASATYQENSNSNHTSAGMIINGFSGTLKAWWECLDPSLRNEIKTTKPRIRSNTCKK
        PD+ FE+ N +     +DG  I  WN+DG++E QI N L E+ +A   Y+   +S+  +A MI++GF+G +K WW+          +  K  I + T  +
Subjt:  PDLNFEQNNKFFRNKQYDGSSIYVWNLDGMSERQIMNMLTEMLIASATYQENSNSNHTSAGMIINGFSGTLKAWWECLDPSLRNEIKTTKPRIRSNTCKK

Query:  ETPKTVTIEEEV---EMEDAVETLVYAISWNFTTAHS-----------------------SKYTDIQRVWYMPDVHH--WKERFIDGLPSYVAERVYMAL
        +  +TV   E V     EDA  TLVY I+ +F                             K T + +V   PD ++  WKERFI GLP   A++V   L
Subjt:  ETPKTVTIEEEV---EMEDAVETLVYAISWNFTTAHS-----------------------SKYTDIQRVWYMPDVHH--WKERFIDGLPSYVAERVYMAL

Query:  CERFDGEIKWIDLTFGDLMSYVINCGLQSAMRSKFREKFKR
         +RF+G+I +  LT+GDL+S++   G++     K +++ K+
Subjt:  CERFDGEIKWIDLTFGDLMSYVINCGLQSAMRSKFREKFKR

XP_023520850.1 uncharacterized protein LOC111784362 [Cucurbita pepo subsp. pepo]2.5e-2230.74Show/hide
Query:  PDLNFEQNNKFFRNKQYDGSSIYVWNLDGMSERQIMNMLTEMLIASATYQ-ENSNSNHTSAGMIINGFSGTLKAWWE-CLDPSLRNEIKTTKP-RIRSNT
        PD+ FE+         YDG +IY WN+DG+S+  IMN++ EM++A+  Y+ +   S+H  A +++ GF+G LK WW+  LD + R +I      R  +  
Subjt:  PDLNFEQNNKFFRNKQYDGSSIYVWNLDGMSERQIMNMLTEMLIASATYQ-ENSNSNHTSAGMIINGFSGTLKAWWE-CLDPSLRNEIKTTKP-RIRSNT

Query:  CKKETPKTVTIEEEVEMEDAVETLVYAISWNFTTAHSSKYTDIQRV--------------WYM------------PDVHHWKERFIDGLPSYVAERVYMA
         K+E P T T  +   +EDAV TL+Y +   F      KY +                  WY               +  WKE F++GLP + + R+   
Subjt:  CKKETPKTVTIEEEVEMEDAVETLVYAISWNFTTAHSSKYTDIQRV--------------WYM------------PDVHHWKERFIDGLPSYVAERVYMA

Query:  LCERFDGEIKWIDLTFGDLMSYVINCGLQSAMRSKFREKFKRVI
        L  +++G I W  L++G + S++I  GL+    SK + K    I
Subjt:  LCERFDGEIKWIDLTFGDLMSYVINCGLQSAMRSKFREKFKRVI

TrEMBL top hitse value%identityAlignment
A0A1U8EBF5 uncharacterized protein LOC1078411601.3e-2130.71Show/hide
Query:  PDLNFEQNNKFFRNKQYDGSSIYVWNLDGMSERQIMNMLTEMLIASATYQENSNSNHTSAGMIINGFSGTLKAWWECLDPSLRNEIKTTKPRIRSNTCKK
        PD+ FE+ N +     +DG  I  WN+DG++E QI N L E+ +A   Y+   +S+  +A M+++GF+G LK WW+          +  K  I + T  +
Subjt:  PDLNFEQNNKFFRNKQYDGSSIYVWNLDGMSERQIMNMLTEMLIASATYQENSNSNHTSAGMIINGFSGTLKAWWECLDPSLRNEIKTTKPRIRSNTCKK

Query:  ETPKTVTIEE---EVEMEDAVETLVYAISWNFTTAHS-----------------------SKYTDIQRVWYMPDVHH--WKERFIDGLPSYVAERVYMAL
        +  +TV  +E   +   EDA  TL+Y I+ +F                             K T + +V   PD ++  WKERFI GLP   A++V   L
Subjt:  ETPKTVTIEE---EVEMEDAVETLVYAISWNFTTAHS-----------------------SKYTDIQRVWYMPDVHH--WKERFIDGLPSYVAERVYMAL

Query:  CERFDGEIKWIDLTFGDLMSYVINCGLQSAMRSKFREKFKR
         +RF+G+I +  LT+GDL+S++   G++     K +++ K+
Subjt:  CERFDGEIKWIDLTFGDLMSYVINCGLQSAMRSKFREKFKR

A0A1U8F121 uncharacterized protein LOC1078497711.0e-2131.54Show/hide
Query:  PDLNFEQNNKFFRNKQYDGSSIYVWNLDGMSERQIMNMLTEMLIASATYQENSNSNHTSAGMIINGFSGTLKAWWECLDPSLRNEIKTTKPRIRSNTCKK
        PD+ FE+ N +     +DG  I  WN+DG++E QI N L E+ +A   Y+   +S+  +A MI++GF+G +K WW+          +  K  I + T  +
Subjt:  PDLNFEQNNKFFRNKQYDGSSIYVWNLDGMSERQIMNMLTEMLIASATYQENSNSNHTSAGMIINGFSGTLKAWWECLDPSLRNEIKTTKPRIRSNTCKK

Query:  ETPKTVTIEEEV---EMEDAVETLVYAISWNFTTAHS-----------------------SKYTDIQRVWYMPDVHH--WKERFIDGLPSYVAERVYMAL
        +  +TV   E V     EDA  TLVY I+ +F                             K T + +V   PD ++  WKERFI GLP   A++V   L
Subjt:  ETPKTVTIEEEV---EMEDAVETLVYAISWNFTTAHS-----------------------SKYTDIQRVWYMPDVHH--WKERFIDGLPSYVAERVYMAL

Query:  CERFDGEIKWIDLTFGDLMSYVINCGLQSAMRSKFREKFKR
         +RF+G+I +  LT+GDL+S++   G++     K +++ K+
Subjt:  CERFDGEIKWIDLTFGDLMSYVINCGLQSAMRSKFREKFKR

A0A251TAC4 Uncharacterized protein1.0e-2131.51Show/hide
Query:  PDLNFEQNNKFFRNKQYDGSSIYVWNLDGMSERQIMNMLTEMLIASATYQENSNSNHTSAGMIINGFSGTLKAWWECLDPSLRNEIKTTKPRIRSNTCKK
        PDL FE+ +   + K YDG+S+Y WN++G +E QI+N+L +M++A+  Y+ N N+      MI++GF+G LK WW   D  L  E K      +    K 
Subjt:  PDLNFEQNNKFFRNKQYDGSSIYVWNLDGMSERQIMNMLTEMLIASATYQENSNSNHTSAGMIINGFSGTLKAWWECLDPSLRNEIKTTKPRIRSNTCKK

Query:  ETPKTVTIEEEVEMEDAVETLVYAISWNF---TTAHSSK------------------YTDI--QRVWYMPDV--HHWKERFIDGLPSYVAERVYMALCER
        E      ++   E  D + TL++AI  +F    T +  +                  Y D+   +V    D    +WKERFI GLP   AER+   + + 
Subjt:  ETPKTVTIEEEVEMEDAVETLVYAISWNF---TTAHSSK------------------YTDI--QRVWYMPDV--HHWKERFIDGLPSYVAERVYMALCER

Query:  FDGEIKWIDLTFGDLMSYVINCGLQSAMRSKFREKFKR
        F+  I + DL++G +++Y+   GL+     K +EK K+
Subjt:  FDGEIKWIDLTFGDLMSYVINCGLQSAMRSKFREKFKR

A0A251VET5 Putative reverse transcriptase domain, Zinc finger, CCHC-type, Aspartic peptidase domain protein9.3e-2332.35Show/hide
Query:  PDLNFEQNNKFFRNKQYDGSSIYVWNLDGMSERQIMNMLTEMLIASATYQENSNSNHTSAGMIINGFSGTLKAWWECLDPSLRNEIKTTKPRIRSNTCKK
        PDL FE+ +   + K YDG+S+Y WN++G +E QI+N+L EM++A+  Y+ N N+      MI++GF+G LK WW   D  L  E K      +    K 
Subjt:  PDLNFEQNNKFFRNKQYDGSSIYVWNLDGMSERQIMNMLTEMLIASATYQENSNSNHTSAGMIINGFSGTLKAWWECLDPSLRNEIKTTKPRIRSNTCKK

Query:  ETPKTVTIEEEVEMEDAVETLVYAISWNF---TTAHSSK------------------YTDI--QRVWYMPDV--HHWKERFIDGLPSYVAERVYMALCER
        E      ++   E  D + TL++AI  +F    T +  +                  Y D+   +V    D    +WKERFI GLP   AER+   + + 
Subjt:  ETPKTVTIEEEVEMEDAVETLVYAISWNF---TTAHSSK------------------YTDI--QRVWYMPDV--HHWKERFIDGLPSYVAERVYMALCER

Query:  FDGEIKWIDLTFGDLMSYVINCGLQSAMRSKFREKFKR
        F+  I + DL++G +++Y+   GL+     K +EK KR
Subjt:  FDGEIKWIDLTFGDLMSYVINCGLQSAMRSKFREKFKR

A5BAI2 Uncharacterized protein (Fragment)1.8e-2131.8Show/hide
Query:  PDLNFEQNNKFFRNKQYDGSSIYVWNLDGMSERQIMNMLTEMLIASATYQENSN-SNHTSAGMIINGFSGTLKAWWE-CLDPSLRNEIKTTKPRIRSNTC
        PD+ FE+ N+ +    Y   +IY WN+DGM+E  I+  L EM + S TY+ N+   NH  A  I+ GF+G LK WW+  L    RN I     RI  N+ 
Subjt:  PDLNFEQNNKFFRNKQYDGSSIYVWNLDGMSERQIMNMLTEMLIASATYQENSN-SNHTSAGMIINGFSGTLKAWWE-CLDPSLRNEIKTTKPRIRSNTC

Query:  KKETPKTVTIEEEVEMEDAVETLVYAISWNF---TTAHSSKYTDIQRVWYMPDVH----------------------HWKERFIDGLPSYVAERVYMALC
             + V  E+  ++E+AV TL+Y+IS +F         K  D+      P +H                       WKE+FI GLP   +ER+ + + 
Subjt:  KKETPKTVTIEEEVEMEDAVETLVYAISWNF---TTAHSSKYTDIQRVWYMPDVH----------------------HWKERFIDGLPSYVAERVYMALC

Query:  ERFDGEIKWIDLTFGDLMSYVINCGLQSAMRSKFREKFK
        E+++G+I +  LT+G+++S V   G++     K +++ K
Subjt:  ERFDGEIKWIDLTFGDLMSYVINCGLQSAMRSKFREKFK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCAGACCTCAATTTCGAGCAGAACAACAAGTTCTTTAGAAATAAGCAGTATGACGGTTCCTCGATATATGTTTGGAACCTTGATGGCATGTCAGAAAGACAAATCAT
GAATATGCTCACTGAAATGCTCATAGCTTCTGCCACATACCAAGAAAATAGTAATTCAAACCATACTTCCGCAGGCATGATCATCAATGGCTTTTCAGGCACCCTTAAGG
CCTGGTGGGAATGCCTTGATCCCAGCCTTAGAAACGAAATCAAAACCACAAAACCAAGGATCAGGAGTAACACTTGTAAAAAGGAAACTCCAAAAACTGTCACTATCGAA
GAAGAAGTAGAAATGGAAGACGCTGTAGAAACCCTCGTCTATGCCATATCCTGGAATTTTACTACCGCCCACAGCTCGAAGTACACGGATATCCAAAGAGTATGGTACAT
GCCCGATGTACATCATTGGAAAGAAAGGTTCATTGATGGACTTCCAAGCTATGTTGCTGAAAGAGTATACATGGCCCTCTGTGAAAGATTTGATGGAGAAATCAAATGGA
TAGATTTAACCTTCGGAGACTTAATGTCTTACGTGATTAATTGCGGATTACAATCTGCAATGAGATCAAAATTCAGAGAAAAGTTCAAAAGGGTGATAAGAACAGAATAA
mRNA sequenceShow/hide mRNA sequence
ATGCCAGACCTCAATTTCGAGCAGAACAACAAGTTCTTTAGAAATAAGCAGTATGACGGTTCCTCGATATATGTTTGGAACCTTGATGGCATGTCAGAAAGACAAATCAT
GAATATGCTCACTGAAATGCTCATAGCTTCTGCCACATACCAAGAAAATAGTAATTCAAACCATACTTCCGCAGGCATGATCATCAATGGCTTTTCAGGCACCCTTAAGG
CCTGGTGGGAATGCCTTGATCCCAGCCTTAGAAACGAAATCAAAACCACAAAACCAAGGATCAGGAGTAACACTTGTAAAAAGGAAACTCCAAAAACTGTCACTATCGAA
GAAGAAGTAGAAATGGAAGACGCTGTAGAAACCCTCGTCTATGCCATATCCTGGAATTTTACTACCGCCCACAGCTCGAAGTACACGGATATCCAAAGAGTATGGTACAT
GCCCGATGTACATCATTGGAAAGAAAGGTTCATTGATGGACTTCCAAGCTATGTTGCTGAAAGAGTATACATGGCCCTCTGTGAAAGATTTGATGGAGAAATCAAATGGA
TAGATTTAACCTTCGGAGACTTAATGTCTTACGTGATTAATTGCGGATTACAATCTGCAATGAGATCAAAATTCAGAGAAAAGTTCAAAAGGGTGATAAGAACAGAATAA
Protein sequenceShow/hide protein sequence
MPDLNFEQNNKFFRNKQYDGSSIYVWNLDGMSERQIMNMLTEMLIASATYQENSNSNHTSAGMIINGFSGTLKAWWECLDPSLRNEIKTTKPRIRSNTCKKETPKTVTIE
EEVEMEDAVETLVYAISWNFTTAHSSKYTDIQRVWYMPDVHHWKERFIDGLPSYVAERVYMALCERFDGEIKWIDLTFGDLMSYVINCGLQSAMRSKFREKFKRVIRTE