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Lag0018535 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0018535
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRNase H domain-containing protein
Genome locationchr5:29065730..29066371
RNA-Seq ExpressionLag0018535
SyntenyLag0018535
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TXG57245.1 hypothetical protein EZV62_018558 [Acer yangbiense]6.7e-0827.23Show/hide
Query:  MDVLNVCGFCGRRGEPSLHVFWHCKFDK---RVLM--DSEFGILVHNVQAGSIFILLRERKFKGLGSAEGLVKWAVSYISLFQHAASSSGLCAHSKITRE
        +DVL+ C FCG   E   HV W C+      R+L+  +S    +VH                    +A  LV W  ++ S F+ A   +    H +I   
Subjt:  MDVLNVCGFCGRRGEPSLHVFWHCKFDK---RVLM--DSEFGILVHNVQAGSIFILLRERKFKGLGSAEGLVKWAVSYISLFQHAASSSGLCAHSKITRE

Query:  EVRWSPPEVGWYKVNKDASFRGRDGRQVWGWLFGILSGKLCCRCRWSSNMYKVRRWSKVGAVVKGLRLALEMGLFPLVLETDSSRVASIFS
        +  W PP++G +K+N D SFR R G    G +     G                   +  A + GL+LA+++G+  +VLE+D+  V  + S
Subjt:  EVRWSPPEVGWYKVNKDASFRGRDGRQVWGWLFGILSGKLCCRCRWSSNMYKVRRWSKVGAVVKGLRLALEMGLFPLVLETDSSRVASIFS

TXG60924.1 hypothetical protein EZV62_012287 [Acer yangbiense]4.4e-0726.34Show/hide
Query:  MDVLNVCGFCGRRGEPSLHVFWHCKFDKRVLMDSEFGILVHNVQAGSIFILLRERKFKGLGSAEGLVKWAVSYISLFQHAASSSGLCAHSKITREEVRWS
        ++VL+ C  CG   E   HV W C+    V                        R   G  +A  LV W  ++ S F+ A   +    H +I   +  W 
Subjt:  MDVLNVCGFCGRRGEPSLHVFWHCKFDKRVLMDSEFGILVHNVQAGSIFILLRERKFKGLGSAEGLVKWAVSYISLFQHAASSSGLCAHSKITREEVRWS

Query:  PPEVGWYKVNKDASFRGRDGRQVWGWLFGILSGKLCCRCRWSSNMYKVRRWSKVGAVVKGLRLALEMGLFPLVLETDSSRVASIFS
        PP++G +K+N DASFR R G    G +     G           +       +  A + GL+LA+++G+  +VLE+D+  V  + S
Subjt:  PPEVGWYKVNKDASFRGRDGRQVWGWLFGILSGKLCCRCRWSSNMYKVRRWSKVGAVVKGLRLALEMGLFPLVLETDSSRVASIFS

XP_019435162.1 PREDICTED: uncharacterized protein LOC109341675 [Lupinus angustifolius]1.3e-0624.57Show/hide
Query:  MDVLNVCGFCGRRGEPSLHVFWHCKFDKRV--LMDSEFGILVHNVQAGSIF------------ILL--------------RERKFKGL----GSAEGLVK
        M + ++C  C    E S H+F++C F K +   +  +FG  + +    SI             +LL               + +F  +      A  ++K
Subjt:  MDVLNVCGFCGRRGEPSLHVFWHCKFDKRV--LMDSEFGILVHNVQAGSIF------------ILL--------------RERKFKGL----GSAEGLVK

Query:  WAVSYISLFQHAASSSGLCAHSKI-------------TREEVRWSPPEVGWYKVNKDASFRGRDGRQVWGWLFGILSGKLCCRCRWSSNMYKVRRWSKVG
           S+   F    + S L   S +             T  EV W+ P +GW K+N D   +G  G    G +F    GK C  C  S    +   +++V 
Subjt:  WAVSYISLFQHAASSSGLCAHSKI-------------TREEVRWSPPEVGWYKVNKDASFRGRDGRQVWGWLFGILSGKLCCRCRWSSNMYKVRRWSKVG

Query:  AVVKGLRLALEMGLFPLVLETDSSRVASIFSG
        A +K +++A   G F + LE DS+ V  IF G
Subjt:  AVVKGLRLALEMGLFPLVLETDSSRVASIFSG

XP_022140628.1 uncharacterized protein LOC111011237 [Momordica charantia]1.7e-0634.96Show/hide
Query:  LVKWAVSYISLFQHAASSSGLCAHSKITR-EEVRWSPPEVGWYKVNKDASFRGRDGRQVWGWLFGILSGK-LCCRCRWSSNMYKVRRWSKVGAVVKGLRL
        LV+WA  Y+  F+ A S+       ++T   EV W PP+   YK+N DASF   D     G +     G+ +    ++  N+  V     + A V+GL+L
Subjt:  LVKWAVSYISLFQHAASSSGLCAHSKITR-EEVRWSPPEVGWYKVNKDASFRGRDGRQVWGWLFGILSGK-LCCRCRWSSNMYKVRRWSKVGAVVKGLRL

Query:  ALEMGLFPLVLETDSSRVASIFS
        A ++G+ P++LETDSSR+ ++FS
Subjt:  ALEMGLFPLVLETDSSRVASIFS

XP_022150918.1 uncharacterized protein LOC111018954 [Momordica charantia]1.5e-1229.76Show/hide
Query:  MDVLNVCGFCGRRGEPSLHVFWHCKFDKRVLMDSEFGILVHNVQAGSIFILLRERKFKGLGSAE--------------------------------GLVK
        +++ N C FCGR GE S+H+FW CKF + + ++S+FG L       S F++LRE   + L  A+                                 LV+
Subjt:  MDVLNVCGFCGRRGEPSLHVFWHCKFDKRVLMDSEFGILVHNVQAGSIFILLRERKFKGLGSAE--------------------------------GLVK

Query:  WAVSYISLFQHAASSSGLCAHSKITR-EEVRWSPPEVGWYKVNKDASFRGRDGRQVWGWLFGILSGK-LCCRCRWSSNMYKVRRWSKVGAVVKGLRLALE
        WA  Y   F+ A S+       ++T   E+ W PP+ G YK+N DASF   D     G +     G+ +    ++  N+  V     + A V+GL+LA E
Subjt:  WAVSYISLFQHAASSSGLCAHSKITR-EEVRWSPPEVGWYKVNKDASFRGRDGRQVWGWLFGILSGK-LCCRCRWSSNMYKVRRWSKVGAVVKGLRLALE

Query:  MGLFP
        +G+ P
Subjt:  MGLFP

TrEMBL top hitse value%identityAlignment
A0A2K2CQN2 Uncharacterized protein3.0e-0636.36Show/hide
Query:  SKITREEVRWSPPEVGWYKVNKDASFRGRDGRQVWGWLFGILSGKLCCRCRWSS-NMYKVRRWSKVGAVVKGLRLALEMGLFPLVLETDSSRVASIFSG
        +K    +  WSPPE G++K+N DASF    G   WG    I S K      W+S         ++  A ++GL+LAL++G  PL+LE+D   V S   G
Subjt:  SKITREEVRWSPPEVGWYKVNKDASFRGRDGRQVWGWLFGILSGKLCCRCRWSS-NMYKVRRWSKVGAVVKGLRLALEMGLFPLVLETDSSRVASIFSG

A0A5C7HKG9 Uncharacterized protein3.3e-0827.23Show/hide
Query:  MDVLNVCGFCGRRGEPSLHVFWHCKFDK---RVLM--DSEFGILVHNVQAGSIFILLRERKFKGLGSAEGLVKWAVSYISLFQHAASSSGLCAHSKITRE
        +DVL+ C FCG   E   HV W C+      R+L+  +S    +VH                    +A  LV W  ++ S F+ A   +    H +I   
Subjt:  MDVLNVCGFCGRRGEPSLHVFWHCKFDK---RVLM--DSEFGILVHNVQAGSIFILLRERKFKGLGSAEGLVKWAVSYISLFQHAASSSGLCAHSKITRE

Query:  EVRWSPPEVGWYKVNKDASFRGRDGRQVWGWLFGILSGKLCCRCRWSSNMYKVRRWSKVGAVVKGLRLALEMGLFPLVLETDSSRVASIFS
        +  W PP++G +K+N D SFR R G    G +     G                   +  A + GL+LA+++G+  +VLE+D+  V  + S
Subjt:  EVRWSPPEVGWYKVNKDASFRGRDGRQVWGWLFGILSGKLCCRCRWSSNMYKVRRWSKVGAVVKGLRLALEMGLFPLVLETDSSRVASIFS

A0A5C7HVU6 CCHC-type domain-containing protein2.1e-0726.34Show/hide
Query:  MDVLNVCGFCGRRGEPSLHVFWHCKFDKRVLMDSEFGILVHNVQAGSIFILLRERKFKGLGSAEGLVKWAVSYISLFQHAASSSGLCAHSKITREEVRWS
        ++VL+ C  CG   E   HV W C+    V                        R   G  +A  LV W  ++ S F+ A   +    H +I   +  W 
Subjt:  MDVLNVCGFCGRRGEPSLHVFWHCKFDKRVLMDSEFGILVHNVQAGSIFILLRERKFKGLGSAEGLVKWAVSYISLFQHAASSSGLCAHSKITREEVRWS

Query:  PPEVGWYKVNKDASFRGRDGRQVWGWLFGILSGKLCCRCRWSSNMYKVRRWSKVGAVVKGLRLALEMGLFPLVLETDSSRVASIFS
        PP++G +K+N DASFR R G    G +     G           +       +  A + GL+LA+++G+  +VLE+D+  V  + S
Subjt:  PPEVGWYKVNKDASFRGRDGRQVWGWLFGILSGKLCCRCRWSSNMYKVRRWSKVGAVVKGLRLALEMGLFPLVLETDSSRVASIFS

A0A6J1CIF1 uncharacterized protein LOC1110112378.0e-0734.96Show/hide
Query:  LVKWAVSYISLFQHAASSSGLCAHSKITR-EEVRWSPPEVGWYKVNKDASFRGRDGRQVWGWLFGILSGK-LCCRCRWSSNMYKVRRWSKVGAVVKGLRL
        LV+WA  Y+  F+ A S+       ++T   EV W PP+   YK+N DASF   D     G +     G+ +    ++  N+  V     + A V+GL+L
Subjt:  LVKWAVSYISLFQHAASSSGLCAHSKITR-EEVRWSPPEVGWYKVNKDASFRGRDGRQVWGWLFGILSGK-LCCRCRWSSNMYKVRRWSKVGAVVKGLRL

Query:  ALEMGLFPLVLETDSSRVASIFS
        A ++G+ P++LETDSSR+ ++FS
Subjt:  ALEMGLFPLVLETDSSRVASIFS

A0A6J1DAR4 uncharacterized protein LOC1110189547.5e-1329.76Show/hide
Query:  MDVLNVCGFCGRRGEPSLHVFWHCKFDKRVLMDSEFGILVHNVQAGSIFILLRERKFKGLGSAE--------------------------------GLVK
        +++ N C FCGR GE S+H+FW CKF + + ++S+FG L       S F++LRE   + L  A+                                 LV+
Subjt:  MDVLNVCGFCGRRGEPSLHVFWHCKFDKRVLMDSEFGILVHNVQAGSIFILLRERKFKGLGSAE--------------------------------GLVK

Query:  WAVSYISLFQHAASSSGLCAHSKITR-EEVRWSPPEVGWYKVNKDASFRGRDGRQVWGWLFGILSGK-LCCRCRWSSNMYKVRRWSKVGAVVKGLRLALE
        WA  Y   F+ A S+       ++T   E+ W PP+ G YK+N DASF   D     G +     G+ +    ++  N+  V     + A V+GL+LA E
Subjt:  WAVSYISLFQHAASSSGLCAHSKITR-EEVRWSPPEVGWYKVNKDASFRGRDGRQVWGWLFGILSGK-LCCRCRWSSNMYKVRRWSKVGAVVKGLRLALE

Query:  MGLFP
        +G+ P
Subjt:  MGLFP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGTGTTGAATGTGTGTGGTTTTTGTGGCCGGCGTGGTGAGCCTAGCTTGCATGTCTTCTGGCATTGTAAGTTTGATAAGAGGGTTTTGATGGATTCTGAGTTTGG
GATCTTGGTACACAACGTGCAGGCAGGGTCTATTTTTATTCTCCTTAGGGAGCGGAAATTCAAGGGACTTGGGTCAGCGGAGGGACTAGTGAAGTGGGCGGTGAGTTATA
TCTCATTGTTTCAACATGCTGCCTCGTCTAGTGGGTTATGTGCGCATAGCAAGATTACAAGGGAAGAGGTAAGATGGAGTCCCCCAGAGGTTGGGTGGTATAAGGTGAAC
AAAGATGCGTCTTTTAGAGGGAGGGATGGTAGGCAGGTTTGGGGGTGGTTGTTCGGGATTTTGTCGGGCAAGTTATGTTGTCGGTGTCGCTGGAGCAGCAACATGTACAA
AGTCCGAAGATGGTCGAAGGTTGGGGCTGTGGTGAAGGGCCTGAGACTGGCGTTGGAGATGGGTCTGTTCCCATTGGTGCTGGAGACCGATTCCAGTCGAGTGGCTAGCA
TTTTTTCAGGATGA
mRNA sequenceShow/hide mRNA sequence
ATGGATGTGTTGAATGTGTGTGGTTTTTGTGGCCGGCGTGGTGAGCCTAGCTTGCATGTCTTCTGGCATTGTAAGTTTGATAAGAGGGTTTTGATGGATTCTGAGTTTGG
GATCTTGGTACACAACGTGCAGGCAGGGTCTATTTTTATTCTCCTTAGGGAGCGGAAATTCAAGGGACTTGGGTCAGCGGAGGGACTAGTGAAGTGGGCGGTGAGTTATA
TCTCATTGTTTCAACATGCTGCCTCGTCTAGTGGGTTATGTGCGCATAGCAAGATTACAAGGGAAGAGGTAAGATGGAGTCCCCCAGAGGTTGGGTGGTATAAGGTGAAC
AAAGATGCGTCTTTTAGAGGGAGGGATGGTAGGCAGGTTTGGGGGTGGTTGTTCGGGATTTTGTCGGGCAAGTTATGTTGTCGGTGTCGCTGGAGCAGCAACATGTACAA
AGTCCGAAGATGGTCGAAGGTTGGGGCTGTGGTGAAGGGCCTGAGACTGGCGTTGGAGATGGGTCTGTTCCCATTGGTGCTGGAGACCGATTCCAGTCGAGTGGCTAGCA
TTTTTTCAGGATGA
Protein sequenceShow/hide protein sequence
MDVLNVCGFCGRRGEPSLHVFWHCKFDKRVLMDSEFGILVHNVQAGSIFILLRERKFKGLGSAEGLVKWAVSYISLFQHAASSSGLCAHSKITREEVRWSPPEVGWYKVN
KDASFRGRDGRQVWGWLFGILSGKLCCRCRWSSNMYKVRRWSKVGAVVKGLRLALEMGLFPLVLETDSSRVASIFSG