; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0018538 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0018538
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionubiquitin-like
Genome locationchr5:29095736..29096303
RNA-Seq ExpressionLag0018538
SyntenyLag0018538
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR000626 - Ubiquitin-like domain
IPR019956 - Ubiquitin domain
IPR029071 - Ubiquitin-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025486.1 polyubiquitin-like [Cucumis melo var. makuwa]6.6e-1443.55Show/hide
Query:  IEAVQALPNMDDELILDAADFLENKKNAQIFMALGVELRRKWLIRKLPRQ-IQISVKTLHGVIIGKLDVLTSEKIAEVKAKIGAKTGISAENQRLIYAGR
        IEAVQALP++ ++L+ +A DFLE +K+A++FMA+   LR KWL RKL ++  +I V  + G +I  L V T   I E+K K+  K G       LIYAG+
Subjt:  IEAVQALPNMDDELILDAADFLENKKNAQIFMALGVELRRKWLIRKLPRQ-IQISVKTLHGVIIGKLDVLTSEKIAEVKAKIGAKTGISAENQRLIYAGR

Query:  ETVDDRSLADYDVRRFTSLHLIKR
           D RSL+DY++R   ++H + R
Subjt:  ETVDDRSLADYDVRRFTSLHLIKR

XP_008463442.1 PREDICTED: polyubiquitin-like [Cucumis melo]4.7e-2051.16Show/hide
Query:  SIGDVIEAVQALPNMDDELILDAADFL-ENKKNAQIFMALGVELRRKWLIRKLPRQ--IQISVKTLHGVIIGKLDVLTSEKIAEVKAKIGAKTGISAENQ
        SI  VI+AV+ALP+MD++LILDA DFL +N+  A++F+++  +LRRKWLI+KL  Q  +QI VKTL G  +  LDVLT++ I +VKAKI AK G   + Q
Subjt:  SIGDVIEAVQALPNMDDELILDAADFL-ENKKNAQIFMALGVELRRKWLIRKLPRQ--IQISVKTLHGVIIGKLDVLTSEKIAEVKAKIGAKTGISAENQ

Query:  RLIYAGRETVDDRSLADYDVRRFTSLHLI
        RL++ G +  DDR+L    +   +SLHLI
Subjt:  RLIYAGRETVDDRSLADYDVRRFTSLHLI

XP_022154969.1 ubiquitin-like [Momordica charantia]4.7e-2047.76Show/hide
Query:  EDSDFFSIGDVIEAVQALPNMDDELILDAADFLENKKNAQIFMALGVELRRKWLIRKLPR--QIQISVKTLHGVIIGKLDVLTSEKIAEVKAKIGAKTGI
        E S+  SIG VI+AVQALP+MD++ ILDA DFL+N +N +IFMAL  +LR++WL+R LPR  Q++I+ +T+ G   G L+VL S+ +  VKAKI  K G 
Subjt:  EDSDFFSIGDVIEAVQALPNMDDELILDAADFLENKKNAQIFMALGVELRRKWLIRKLPR--QIQISVKTLHGVIIGKLDVLTSEKIAEVKAKIGAKTGI

Query:  SAENQRLIYAGRETVDDRSLADYDVRRFTSLHLI
          E QRL Y G +     +LA+  V   + L +I
Subjt:  SAENQRLIYAGRETVDDRSLADYDVRRFTSLHLI

XP_022154970.1 ubiquitin-like isoform X1 [Momordica charantia]3.7e-2551.09Show/hide
Query:  DEDSDFFSIGDVIEAVQALPNMDDELILDAADFLENKKNAQIFMALGVELRRKWLIRKLPR--QIQISVKTLHGVIIGKLDVLTSEKIAEVKAKIGAKTG
        D  S   SIG VI+AVQALP+MD++LILDA DF +N +N +IFMAL  +LR++WL+R LPR  Q+QI+VK L G  +   ++L S  I  VKAKI A  G
Subjt:  DEDSDFFSIGDVIEAVQALPNMDDELILDAADFLENKKNAQIFMALGVELRRKWLIRKLPR--QIQISVKTLHGVIIGKLDVLTSEKIAEVKAKIGAKTG

Query:  ISAENQRLIYAGRETVDDRSLADYDVRRFTSLHLIKR
           + QRLIY GR+  D R+LA+Y++R  ++LH++ R
Subjt:  ISAENQRLIYAGRETVDDRSLADYDVRRFTSLHLIKR

XP_022154972.1 ubiquitin-like isoform X2 [Momordica charantia]1.7e-2551.11Show/hide
Query:  DEDSDFFSIGDVIEAVQALPNMDDELILDAADFLENKKNAQIFMALGVELRRKWLIRKLPRQIQISVKTLHGVIIGKLDVLTSEKIAEVKAKIGAKTGIS
        D  S   SIG VI+AVQALP+MD++LILDA DF +N +N +IFMAL  +LR++WL+R LPR  QI+VK L G  +   ++L S  I  VKAKI A  G  
Subjt:  DEDSDFFSIGDVIEAVQALPNMDDELILDAADFLENKKNAQIFMALGVELRRKWLIRKLPRQIQISVKTLHGVIIGKLDVLTSEKIAEVKAKIGAKTGIS

Query:  AENQRLIYAGRETVDDRSLADYDVRRFTSLHLIKR
         + QRLIY GR+  D R+LA+Y++R  ++LH++ R
Subjt:  AENQRLIYAGRETVDDRSLADYDVRRFTSLHLIKR

TrEMBL top hitse value%identityAlignment
A0A1S3CKU5 polyubiquitin-like2.3e-2051.16Show/hide
Query:  SIGDVIEAVQALPNMDDELILDAADFL-ENKKNAQIFMALGVELRRKWLIRKLPRQ--IQISVKTLHGVIIGKLDVLTSEKIAEVKAKIGAKTGISAENQ
        SI  VI+AV+ALP+MD++LILDA DFL +N+  A++F+++  +LRRKWLI+KL  Q  +QI VKTL G  +  LDVLT++ I +VKAKI AK G   + Q
Subjt:  SIGDVIEAVQALPNMDDELILDAADFL-ENKKNAQIFMALGVELRRKWLIRKLPRQ--IQISVKTLHGVIIGKLDVLTSEKIAEVKAKIGAKTGISAENQ

Query:  RLIYAGRETVDDRSLADYDVRRFTSLHLI
        RL++ G +  DDR+L    +   +SLHLI
Subjt:  RLIYAGRETVDDRSLADYDVRRFTSLHLI

A0A5D3BMH5 Polyubiquitin-like2.3e-2051.16Show/hide
Query:  SIGDVIEAVQALPNMDDELILDAADFL-ENKKNAQIFMALGVELRRKWLIRKLPRQ--IQISVKTLHGVIIGKLDVLTSEKIAEVKAKIGAKTGISAENQ
        SI  VI+AV+ALP+MD++LILDA DFL +N+  A++F+++  +LRRKWLI+KL  Q  +QI VKTL G  +  LDVLT++ I +VKAKI AK G   + Q
Subjt:  SIGDVIEAVQALPNMDDELILDAADFL-ENKKNAQIFMALGVELRRKWLIRKLPRQ--IQISVKTLHGVIIGKLDVLTSEKIAEVKAKIGAKTGISAENQ

Query:  RLIYAGRETVDDRSLADYDVRRFTSLHLI
        RL++ G +  DDR+L    +   +SLHLI
Subjt:  RLIYAGRETVDDRSLADYDVRRFTSLHLI

A0A6J1DL46 ubiquitin-like isoform X11.8e-2551.09Show/hide
Query:  DEDSDFFSIGDVIEAVQALPNMDDELILDAADFLENKKNAQIFMALGVELRRKWLIRKLPR--QIQISVKTLHGVIIGKLDVLTSEKIAEVKAKIGAKTG
        D  S   SIG VI+AVQALP+MD++LILDA DF +N +N +IFMAL  +LR++WL+R LPR  Q+QI+VK L G  +   ++L S  I  VKAKI A  G
Subjt:  DEDSDFFSIGDVIEAVQALPNMDDELILDAADFLENKKNAQIFMALGVELRRKWLIRKLPR--QIQISVKTLHGVIIGKLDVLTSEKIAEVKAKIGAKTG

Query:  ISAENQRLIYAGRETVDDRSLADYDVRRFTSLHLIKR
           + QRLIY GR+  D R+LA+Y++R  ++LH++ R
Subjt:  ISAENQRLIYAGRETVDDRSLADYDVRRFTSLHLIKR

A0A6J1DN50 ubiquitin-like isoform X28.1e-2651.11Show/hide
Query:  DEDSDFFSIGDVIEAVQALPNMDDELILDAADFLENKKNAQIFMALGVELRRKWLIRKLPRQIQISVKTLHGVIIGKLDVLTSEKIAEVKAKIGAKTGIS
        D  S   SIG VI+AVQALP+MD++LILDA DF +N +N +IFMAL  +LR++WL+R LPR  QI+VK L G  +   ++L S  I  VKAKI A  G  
Subjt:  DEDSDFFSIGDVIEAVQALPNMDDELILDAADFLENKKNAQIFMALGVELRRKWLIRKLPRQIQISVKTLHGVIIGKLDVLTSEKIAEVKAKIGAKTGIS

Query:  AENQRLIYAGRETVDDRSLADYDVRRFTSLHLIKR
         + QRLIY GR+  D R+LA+Y++R  ++LH++ R
Subjt:  AENQRLIYAGRETVDDRSLADYDVRRFTSLHLIKR

A0A6J1DNT8 ubiquitin-like2.3e-2047.76Show/hide
Query:  EDSDFFSIGDVIEAVQALPNMDDELILDAADFLENKKNAQIFMALGVELRRKWLIRKLPR--QIQISVKTLHGVIIGKLDVLTSEKIAEVKAKIGAKTGI
        E S+  SIG VI+AVQALP+MD++ ILDA DFL+N +N +IFMAL  +LR++WL+R LPR  Q++I+ +T+ G   G L+VL S+ +  VKAKI  K G 
Subjt:  EDSDFFSIGDVIEAVQALPNMDDELILDAADFLENKKNAQIFMALGVELRRKWLIRKLPR--QIQISVKTLHGVIIGKLDVLTSEKIAEVKAKIGAKTGI

Query:  SAENQRLIYAGRETVDDRSLADYDVRRFTSLHLI
          E QRL Y G +     +LA+  V   + L +I
Subjt:  SAENQRLIYAGRETVDDRSLADYDVRRFTSLHLI

SwissProt top hitse value%identityAlignment
P0CG83 Polyubiquitin (Fragment)7.8e-1046.91Show/hide
Query:  LIRKLPRQIQISVKTLHGVIIGKLDVLTSEKIAEVKAKIGAKTGISAENQRLIYAGRETVDDRSLADYDVRRFTSLHLIKR
        L+ +L   +QI VKTL G  I  L+V +S+ I  VKAKI  K GI  + QRLI+AG++  D R+LADY++++ ++LHL+ R
Subjt:  LIRKLPRQIQISVKTLHGVIIGKLDVLTSEKIAEVKAKIGAKTGISAENQRLIYAGRETVDDRSLADYDVRRFTSLHLIKR

P0CH27 Ubiquitin-60S ribosomal protein L401.0e-0949.32Show/hide
Query:  IQISVKTLHGVIIGKLDVLTSEKIAEVKAKIGAKTGISAENQRLIYAGRETVDDRSLADYDVRRFTSLHLIKR
        +QI VKTL G  I  L+V +S+ I  VKAKI  K GI  + QRLI+AG++  D R+LADY++++ ++LHL+ R
Subjt:  IQISVKTLHGVIIGKLDVLTSEKIAEVKAKIGAKTGISAENQRLIYAGRETVDDRSLADYDVRRFTSLHLIKR

P14795 Ubiquitin-60S ribosomal protein L401.0e-0949.32Show/hide
Query:  IQISVKTLHGVIIGKLDVLTSEKIAEVKAKIGAKTGISAENQRLIYAGRETVDDRSLADYDVRRFTSLHLIKR
        +QI VKTL G  I  L+V +S+ I  VKAKI  K GI  + QRLI+AG++  D R+LADY++++ ++LHL+ R
Subjt:  IQISVKTLHGVIIGKLDVLTSEKIAEVKAKIGAKTGISAENQRLIYAGRETVDDRSLADYDVRRFTSLHLIKR

Q3E7K8 Polyubiquitin 122.7e-1048.15Show/hide
Query:  LIRKLPRQIQISVKTLHGVIIGKLDVLTSEKIAEVKAKIGAKTGISAENQRLIYAGRETVDDRSLADYDVRRFTSLHLIKR
        L+ +L   +QI VKTL G  I  L+V +S+ I  VKAKI  K GIS + QRLI+AG++  D R+LADY++++ ++LHL+ R
Subjt:  LIRKLPRQIQISVKTLHGVIIGKLDVLTSEKIAEVKAKIGAKTGISAENQRLIYAGRETVDDRSLADYDVRRFTSLHLIKR

Q58G87 Polyubiquitin 37.8e-1046.91Show/hide
Query:  LIRKLPRQIQISVKTLHGVIIGKLDVLTSEKIAEVKAKIGAKTGISAENQRLIYAGRETVDDRSLADYDVRRFTSLHLIKR
        L+ +L   +QI VKTL G  I  L+V +S+ I  VKAKI  K GI  + QRLI+AG++  D R+LADY++++ ++LHL+ R
Subjt:  LIRKLPRQIQISVKTLHGVIIGKLDVLTSEKIAEVKAKIGAKTGISAENQRLIYAGRETVDDRSLADYDVRRFTSLHLIKR

Arabidopsis top hitse value%identityAlignment
AT1G55060.1 ubiquitin 121.9e-1148.15Show/hide
Query:  LIRKLPRQIQISVKTLHGVIIGKLDVLTSEKIAEVKAKIGAKTGISAENQRLIYAGRETVDDRSLADYDVRRFTSLHLIKR
        L+ +L   +QI VKTL G  I  L+V +S+ I  VKAKI  K GIS + QRLI+AG++  D R+LADY++++ ++LHL+ R
Subjt:  LIRKLPRQIQISVKTLHGVIIGKLDVLTSEKIAEVKAKIGAKTGISAENQRLIYAGRETVDDRSLADYDVRRFTSLHLIKR

AT2G24960.1 unknown protein7.7e-1362.75Show/hide
Query:  IGDVIEAVQALPNMDDELILDAADFLENKKNAQIFMALGVELRRKWLIRKL
        IG+ ++A+QALP+MDDEL+LDA D LE+++ A+ F+AL V LRRKWL+RKL
Subjt:  IGDVIEAVQALPNMDDELILDAADFLENKKNAQIFMALGVELRRKWLIRKL

AT2G24960.2 unknown protein7.7e-1362.75Show/hide
Query:  IGDVIEAVQALPNMDDELILDAADFLENKKNAQIFMALGVELRRKWLIRKL
        IG+ ++A+QALP+MDDEL+LDA D LE+++ A+ F+AL V LRRKWL+RKL
Subjt:  IGDVIEAVQALPNMDDELILDAADFLENKKNAQIFMALGVELRRKWLIRKL

AT4G02210.1 unknown protein4.1e-1458.06Show/hide
Query:  EDSDFFSIGDVIEAVQALPNMDDELILDAADFLENKKNAQIFMALGVELRRKWLIRKLPRQI
        +++   SI D +EA+QALP+MDDELILDA D LE+K  A+ F+AL V+LR+KWL+RKL  Q+
Subjt:  EDSDFFSIGDVIEAVQALPNMDDELILDAADFLENKKNAQIFMALGVELRRKWLIRKLPRQI

AT4G02210.2 unknown protein4.1e-1458.06Show/hide
Query:  EDSDFFSIGDVIEAVQALPNMDDELILDAADFLENKKNAQIFMALGVELRRKWLIRKLPRQI
        +++   SI D +EA+QALP+MDDELILDA D LE+K  A+ F+AL V+LR+KWL+RKL  Q+
Subjt:  EDSDFFSIGDVIEAVQALPNMDDELILDAADFLENKKNAQIFMALGVELRRKWLIRKLPRQI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGTGGAGGATTCTTCTTTAAATGACGAAGACTCAGACTTCTTCTCCATTGGAGACGTAATTGAAGCTGTGCAAGCATTACCCAACATGGATGACGAACTTATATT
AGACGCCGCTGATTTCTTAGAGAACAAAAAGAATGCACAAATATTTATGGCTTTGGGTGTCGAACTACGAAGAAAATGGCTGATCAGAAAACTTCCTCGCCAGATTCAGA
TCTCTGTGAAAACTCTCCATGGCGTGATAATTGGTAAACTGGACGTTTTGACGTCGGAGAAAATCGCAGAAGTGAAGGCTAAAATAGGAGCGAAGACGGGCATTTCTGCA
GAGAATCAGCGGCTGATATATGCAGGAAGGGAAACTGTGGATGATCGTTCTCTTGCAGATTATGACGTGCGTAGGTTCACTAGTCTGCACTTGATCAAGAGGCAGGGCGA
GATAACCAAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCAGTGGAGGATTCTTCTTTAAATGACGAAGACTCAGACTTCTTCTCCATTGGAGACGTAATTGAAGCTGTGCAAGCATTACCCAACATGGATGACGAACTTATATT
AGACGCCGCTGATTTCTTAGAGAACAAAAAGAATGCACAAATATTTATGGCTTTGGGTGTCGAACTACGAAGAAAATGGCTGATCAGAAAACTTCCTCGCCAGATTCAGA
TCTCTGTGAAAACTCTCCATGGCGTGATAATTGGTAAACTGGACGTTTTGACGTCGGAGAAAATCGCAGAAGTGAAGGCTAAAATAGGAGCGAAGACGGGCATTTCTGCA
GAGAATCAGCGGCTGATATATGCAGGAAGGGAAACTGTGGATGATCGTTCTCTTGCAGATTATGACGTGCGTAGGTTCACTAGTCTGCACTTGATCAAGAGGCAGGGCGA
GATAACCAAGTAG
Protein sequenceShow/hide protein sequence
MAVEDSSLNDEDSDFFSIGDVIEAVQALPNMDDELILDAADFLENKKNAQIFMALGVELRRKWLIRKLPRQIQISVKTLHGVIIGKLDVLTSEKIAEVKAKIGAKTGISA
ENQRLIYAGRETVDDRSLADYDVRRFTSLHLIKRQGEITK