; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0018542 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0018542
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionF-box/LRR-repeat protein 4
Genome locationchr5:29262734..29263399
RNA-Seq ExpressionLag0018542
SyntenyLag0018542
Gene Ontology termsNA
InterPro domainsIPR032675 - Leucine-rich repeat domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588941.1 F-box/LRR-repeat protein 7, partial [Cucurbita argyrosperma subsp. sororia]1.7e-5160.51Show/hide
Query:  PDLHSLSILSADCSALPTATLSAQIIPQIHLFCTNLRALRFLAGPV------SLSSGCTHLTSLCIDICRPLNFRWVVNFPALKSLSIYVGSGDGFEIEL
        P L SLSILSAD SA+PTATLS Q+I +I  FC NL++LR LAGPV      SLSS CTHL SL I+I RPLNFRWVVNFP+LKSLS+ V SG+GFEIEL
Subjt:  PDLHSLSILSADCSALPTATLSAQIIPQIHLFCTNLRALRFLAGPV------SLSSGCTHLTSLCIDICRPLNFRWVVNFPALKSLSIYVGSGDGFEIEL

Query:  NFGDWERESVELGIESLCLSGLWAGDWGA-------------------------------ECLPGLCEVELRTCRSIADGVLMKLSENCQSLISI
        N  DWE ES +L I+SLCLSGL AGDWGA                               ECLP L EVELRTCRSIADGVLMKL++NC++L S+
Subjt:  NFGDWERESVELGIESLCLSGLWAGDWGA-------------------------------ECLPGLCEVELRTCRSIADGVLMKLSENCQSLISI
KAG7022709.1 F-box/LRR-repeat protein 7, partial [Cucurbita argyrosperma subsp. argyrosperma]5.9e-5260.51Show/hide
Query:  PDLHSLSILSADCSALPTATLSAQIIPQIHLFCTNLRALRFLAGPV------SLSSGCTHLTSLCIDICRPLNFRWVVNFPALKSLSIYVGSGDGFEIEL
        P + SLSILSAD SA+PTATLS Q+I +I  FCTNL++LR LAGPV      SLSS CTHL SL I+I RPLNFRWVVNFP+LKSLS+ V SG+GFEIEL
Subjt:  PDLHSLSILSADCSALPTATLSAQIIPQIHLFCTNLRALRFLAGPV------SLSSGCTHLTSLCIDICRPLNFRWVVNFPALKSLSIYVGSGDGFEIEL

Query:  NFGDWERESVELGIESLCLSGLWAGDWGA-------------------------------ECLPGLCEVELRTCRSIADGVLMKLSENCQSLISI
        N  DWE ES +L I+SLCLSGL AGDWGA                               ECLP L EVELRTCRSIADGVLMKL++NC++L S+
Subjt:  NFGDWERESVELGIESLCLSGLWAGDWGA-------------------------------ECLPGLCEVELRTCRSIADGVLMKLSENCQSLISI
XP_022928541.1 F-box/LRR-repeat protein 7 [Cucurbita moschata]1.7e-5160.51Show/hide
Query:  PDLHSLSILSADCSALPTATLSAQIIPQIHLFCTNLRALRFLAGPV------SLSSGCTHLTSLCIDICRPLNFRWVVNFPALKSLSIYVGSGDGFEIEL
        P L SLSILSAD SA+PTATLS Q+I +I  FC NL++LR LAGPV      SLSS CTHL SL I+I RPLNFRWVVNFP+LKSLS+ V SG+GFEIEL
Subjt:  PDLHSLSILSADCSALPTATLSAQIIPQIHLFCTNLRALRFLAGPV------SLSSGCTHLTSLCIDICRPLNFRWVVNFPALKSLSIYVGSGDGFEIEL

Query:  NFGDWERESVELGIESLCLSGLWAGDWGA-------------------------------ECLPGLCEVELRTCRSIADGVLMKLSENCQSLISI
        N  DWE ES +L I+SLCLSGL AGDWGA                               ECLP L EVELRTCRSIADGVLMKL++NC++L S+
Subjt:  NFGDWERESVELGIESLCLSGLWAGDWGA-------------------------------ECLPGLCEVELRTCRSIADGVLMKLSENCQSLISI
XP_022989119.1 F-box/LRR-repeat protein 7 [Cucurbita maxima]5.9e-5261.03Show/hide
Query:  PDLHSLSILSADCSALPTATLSAQIIPQIHLFCTNLRALRFLAGPV------SLSSGCTHLTSLCIDICRPLNFRWVVNFPALKSLSIYVGSGDGFEIEL
        P L SLSILSAD SA+PTATLS Q+I +I  FCTNL++LR LAGPV      SLSS CTHL SL I+I RPLNFRWVVNFP+LKSLSI V SG+GFEIEL
Subjt:  PDLHSLSILSADCSALPTATLSAQIIPQIHLFCTNLRALRFLAGPV------SLSSGCTHLTSLCIDICRPLNFRWVVNFPALKSLSIYVGSGDGFEIEL

Query:  NFGDWERESVELGIESLCLSGLWAGDWGA-------------------------------ECLPGLCEVELRTCRSIADGVLMKLSENCQSLISI
        N  DWE ES +L I++LCLSGL AGDWGA                               ECLP L EVELRTCRSIADGVLMKL++NC++L S+
Subjt:  NFGDWERESVELGIESLCLSGLWAGDWGA-------------------------------ECLPGLCEVELRTCRSIADGVLMKLSENCQSLISI
XP_038906121.1 F-box/LRR-repeat protein 4 [Benincasa hispida]3.1e-5361.81Show/hide
Query:  PDLHSLSILSADCSALPTATLSAQIIPQIHLFCTNLRALRFLAGP------VSLSSGCTHLTSLCIDICRPLNFRWVVNFPALKSLSIYVGSGDGFEIEL
        P L SLSILSAD SA P AT SA+I+ +I  FCTNL+ALRFLAGP      VSLSS CTHL SL I+I RPLNFRWVVNFP LK LS+ V SG+GFEIE+
Subjt:  PDLHSLSILSADCSALPTATLSAQIIPQIHLFCTNLRALRFLAGP------VSLSSGCTHLTSLCIDICRPLNFRWVVNFPALKSLSIYVGSGDGFEIEL

Query:  NFGDWERES----VELGIESLCLSGLWAGDWG-------------------------------AECLPGLCEVELRTCRSIADGVLMKLSENCQSLISI
        N GDWE ES    VELGI+SLCLSGL AGDWG                                ECLPGLCEVELRTCRSIADGVLMKL+ENC++L S+
Subjt:  NFGDWERES----VELGIESLCLSGLWAGDWG-------------------------------AECLPGLCEVELRTCRSIADGVLMKLSENCQSLISI
TrEMBL top hitse value%identityAlignment
A0A0A0LCG3 Uncharacterized protein1.0e-4959.5Show/hide
Query:  PDLHSLSILS-ADCSALPTATLSAQIIPQIHLFCTNLRALRFLAGP------VSLSSGCTHLTSLCIDICRPLNFRWVVNFPALKSLSIYVGSGDGFEIE
        P L SLSILS A+ SA P AT SAQII +I  FCTNL+ALRFLAGP      VSLSS CTHL+SL I++ RPLNFRWVVNFP LKSLS+ V SG+GFEIE
Subjt:  PDLHSLSILS-ADCSALPTATLSAQIIPQIHLFCTNLRALRFLAGP------VSLSSGCTHLTSLCIDICRPLNFRWVVNFPALKSLSIYVGSGDGFEIE

Query:  LNFGDWERESVE----LGIESLCLSGLWAGDWG-------------------------------AECLPGLCEVELRTCRSIADGVLMKLSENCQSLISI
        ++ GDWE ES E    LGI+SLCLSGL AGDWG                                ECL GLC VELRTCRSIAD VLMKL+ENC++L S+
Subjt:  LNFGDWERESVE----LGIESLCLSGLWAGDWG-------------------------------AECLPGLCEVELRTCRSIADGVLMKLSENCQSLISI
A0A1S3CMP1 F-box/LRR-repeat protein 41.1e-5160Show/hide
Query:  PDLHSLSILS-ADCSALPTATLSAQIIPQIHLFCTNLRALRFLAGP------VSLSSGCTHLTSLCIDICRPLNFRWVVNFPALKSLSIYVGSGDGFEIE
        P L SLSILS AD ++ P+AT SAQII +I  FC+NL+ALRFLAGP      VSLSS CTHL+SL I++ RPLNFRWVVNFP LKSLS+ V SG+GFEIE
Subjt:  PDLHSLSILS-ADCSALPTATLSAQIIPQIHLFCTNLRALRFLAGP------VSLSSGCTHLTSLCIDICRPLNFRWVVNFPALKSLSIYVGSGDGFEIE

Query:  LNFGDWERESVE----LGIESLCLSGLWAGDWG-------------------------------AECLPGLCEVELRTCRSIADGVLMKLSENCQSLISI
        +N GDWE ES E    LGI+SLCLSGL AGDWG                                ECLPGLC VELRTCRSIADGVLMKL+ENC++L+S+
Subjt:  LNFGDWERESVE----LGIESLCLSGLWAGDWG-------------------------------AECLPGLCEVELRTCRSIADGVLMKLSENCQSLISI
A0A5A7UUM4 F-box/LRR-repeat protein 41.1e-5160Show/hide
Query:  PDLHSLSILS-ADCSALPTATLSAQIIPQIHLFCTNLRALRFLAGP------VSLSSGCTHLTSLCIDICRPLNFRWVVNFPALKSLSIYVGSGDGFEIE
        P L SLSILS AD ++ P+AT SAQII +I  FC+NL+ALRFLAGP      VSLSS CTHL+SL I++ RPLNFRWVVNFP LKSLS+ V SG+GFEIE
Subjt:  PDLHSLSILS-ADCSALPTATLSAQIIPQIHLFCTNLRALRFLAGP------VSLSSGCTHLTSLCIDICRPLNFRWVVNFPALKSLSIYVGSGDGFEIE

Query:  LNFGDWERESVE----LGIESLCLSGLWAGDWG-------------------------------AECLPGLCEVELRTCRSIADGVLMKLSENCQSLISI
        +N GDWE ES E    LGI+SLCLSGL AGDWG                                ECLPGLC VELRTCRSIADGVLMKL+ENC++L+S+
Subjt:  LNFGDWERESVE----LGIESLCLSGLWAGDWG-------------------------------AECLPGLCEVELRTCRSIADGVLMKLSENCQSLISI
A0A6J1EKK1 F-box/LRR-repeat protein 78.3e-5260.51Show/hide
Query:  PDLHSLSILSADCSALPTATLSAQIIPQIHLFCTNLRALRFLAGPV------SLSSGCTHLTSLCIDICRPLNFRWVVNFPALKSLSIYVGSGDGFEIEL
        P L SLSILSAD SA+PTATLS Q+I +I  FC NL++LR LAGPV      SLSS CTHL SL I+I RPLNFRWVVNFP+LKSLS+ V SG+GFEIEL
Subjt:  PDLHSLSILSADCSALPTATLSAQIIPQIHLFCTNLRALRFLAGPV------SLSSGCTHLTSLCIDICRPLNFRWVVNFPALKSLSIYVGSGDGFEIEL

Query:  NFGDWERESVELGIESLCLSGLWAGDWGA-------------------------------ECLPGLCEVELRTCRSIADGVLMKLSENCQSLISI
        N  DWE ES +L I+SLCLSGL AGDWGA                               ECLP L EVELRTCRSIADGVLMKL++NC++L S+
Subjt:  NFGDWERESVELGIESLCLSGLWAGDWGA-------------------------------ECLPGLCEVELRTCRSIADGVLMKLSENCQSLISI
A0A6J1JNG5 F-box/LRR-repeat protein 72.9e-5261.03Show/hide
Query:  PDLHSLSILSADCSALPTATLSAQIIPQIHLFCTNLRALRFLAGPV------SLSSGCTHLTSLCIDICRPLNFRWVVNFPALKSLSIYVGSGDGFEIEL
        P L SLSILSAD SA+PTATLS Q+I +I  FCTNL++LR LAGPV      SLSS CTHL SL I+I RPLNFRWVVNFP+LKSLSI V SG+GFEIEL
Subjt:  PDLHSLSILSADCSALPTATLSAQIIPQIHLFCTNLRALRFLAGPV------SLSSGCTHLTSLCIDICRPLNFRWVVNFPALKSLSIYVGSGDGFEIEL

Query:  NFGDWERESVELGIESLCLSGLWAGDWGA-------------------------------ECLPGLCEVELRTCRSIADGVLMKLSENCQSLISI
        N  DWE ES +L I++LCLSGL AGDWGA                               ECLP L EVELRTCRSIADGVLMKL++NC++L S+
Subjt:  NFGDWERESVELGIESLCLSGLWAGDWGA-------------------------------ECLPGLCEVELRTCRSIADGVLMKLSENCQSLISI
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G40470.1 RNI-like superfamily protein1.9e-1639.77Show/hide
Query:  SAQIIPQIHLFCTNLRALRFLAGPVSLS-----SGCTHLTSLCIDICRPLN--FRWVVNFPALKSLSIYVGSGDGFEIEL-NFGDWERESVELGIESLCL
        S ++I  I   C NLR L FL  PVS S     S    LTSL I++ +P N  F W+  F +LK LSI+V S      +         E VELG+ES+ L
Subjt:  SAQIIPQIHLFCTNLRALRFLAGPVSLS-----SGCTHLTSLCIDICRPLN--FRWVVNFPALKSLSIYVGSGDGFEIEL-NFGDWERESVELGIESLCL

Query:  SG----------LW-------------AGDWGAE---CLPGLCEVELRTCRSIADGVLMKLSENCQSLISI
         G          LW              G  G E   CL  L E+ELRTCRSI D VL+K+SE C+SL S+
Subjt:  SG----------LW-------------AGDWGAE---CLPGLCEVELRTCRSIADGVLMKLSENCQSLISI

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTCTCCCCTCGCCGGATCTTCACTCCCTTTCAATTCTCTCCGCCGACTGCTCCGCCTTGCCAACCGCCACTCTCTCCGCCCAAATCATCCCCCAAATCCACCTTTT
CTGTACGAATCTTCGGGCTCTGAGATTCCTCGCTGGACCTGTTTCTCTCTCCTCAGGATGTACCCACCTCACTTCTCTCTGTATCGACATATGCCGGCCGTTGAATTTCC
GGTGGGTTGTTAATTTTCCGGCTCTGAAATCGTTGTCGATTTATGTTGGCTCCGGCGATGGTTTTGAAATTGAGTTGAATTTCGGCGATTGGGAGAGGGAATCGGTGGAA
TTAGGGATCGAGAGCCTCTGTTTGTCCGGCCTCTGGGCCGGCGATTGGGGCGCCGAGTGCTTGCCGGGACTGTGCGAGGTGGAGCTGCGAACTTGCCGGAGCATCGCCGA
CGGCGTTCTGATGAAATTGTCGGAGAATTGTCAAAGTCTTATCTCTATTCGTGCTATTCGGGTCGCCGGCGGGAGAAAAAGAGAGAAGAGATGGGGGATGAGGGGCGGCG
GAGAGAAGAAGGGAGGGAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCTCTCCCCTCGCCGGATCTTCACTCCCTTTCAATTCTCTCCGCCGACTGCTCCGCCTTGCCAACCGCCACTCTCTCCGCCCAAATCATCCCCCAAATCCACCTTTT
CTGTACGAATCTTCGGGCTCTGAGATTCCTCGCTGGACCTGTTTCTCTCTCCTCAGGATGTACCCACCTCACTTCTCTCTGTATCGACATATGCCGGCCGTTGAATTTCC
GGTGGGTTGTTAATTTTCCGGCTCTGAAATCGTTGTCGATTTATGTTGGCTCCGGCGATGGTTTTGAAATTGAGTTGAATTTCGGCGATTGGGAGAGGGAATCGGTGGAA
TTAGGGATCGAGAGCCTCTGTTTGTCCGGCCTCTGGGCCGGCGATTGGGGCGCCGAGTGCTTGCCGGGACTGTGCGAGGTGGAGCTGCGAACTTGCCGGAGCATCGCCGA
CGGCGTTCTGATGAAATTGTCGGAGAATTGTCAAAGTCTTATCTCTATTCGTGCTATTCGGGTCGCCGGCGGGAGAAAAAGAGAGAAGAGATGGGGGATGAGGGGCGGCG
GAGAGAAGAAGGGAGGGAAGTGA
Protein sequenceShow/hide protein sequence
MSLPSPDLHSLSILSADCSALPTATLSAQIIPQIHLFCTNLRALRFLAGPVSLSSGCTHLTSLCIDICRPLNFRWVVNFPALKSLSIYVGSGDGFEIELNFGDWERESVE
LGIESLCLSGLWAGDWGAECLPGLCEVELRTCRSIADGVLMKLSENCQSLISIRAIRVAGGRKREKRWGMRGGGEKKGGK