; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0018545 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0018545
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionubiquitin-like
Genome locationchr5:29293770..29294309
RNA-Seq ExpressionLag0018545
SyntenyLag0018545
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR000626 - Ubiquitin-like domain
IPR019956 - Ubiquitin domain
IPR029071 - Ubiquitin-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025481.1 polyubiquitin-like [Cucumis melo var. makuwa]1.2e-2045.8Show/hide
Query:  SVVEAVQALPDMDEDLVLDAFDFLEDENKAKLFVSMDVKFRKNWLIRKLLPQPQMRILVIVLDGKRIKLDVLPSDTIANVKAKIQVKGGYRHPSDIWLIY
        + +EAVQAL D+DEDL  +AFDFLE +N AK+F++M+   R  WL RKL   P M+IL+  + GK I + V    TI  +K K+  K  Y  P+ +  I 
Subjt:  SVVEAVQALPDMDEDLVLDAFDFLEDENKAKLFVSMDVKFRKNWLIRKLLPQPQMRILVIVLDGKRIKLDVLPSDTIANVKAKIQVKGGYRHPSDIWLIY

Query:  AGKHLEDDLTLADYNISYDCTLHASLRLCGC
        AGK LE+  +L+DYNI+   T+H   R+CGC
Subjt:  AGKHLEDDLTLADYNISYDCTLHASLRLCGC

KAA0025486.1 polyubiquitin-like [Cucumis melo var. makuwa]1.4e-2450.38Show/hide
Query:  SVVEAVQALPDMDEDLVLDAFDFLEDENKAKLFVSMDVKFRKNWLIRKLLPQPQMRILVIVLDGKRIKLDVLPSDTIANVKAKIQVKGGYRHPSDIWLIY
        + +EAVQALPD+ EDL+ +AFDFLE    AK+F++++   R  WL RKL  +P   I VI +DG  I L V    TI  +K K+  K GY  P+ + LIY
Subjt:  SVVEAVQALPDMDEDLVLDAFDFLEDENKAKLFVSMDVKFRKNWLIRKLLPQPQMRILVIVLDGKRIKLDVLPSDTIANVKAKIQVKGGYRHPSDIWLIY

Query:  AGKHLEDDLTLADYNISYDCTLHASLRLCGC
        AGK LED  +L+DYNI   C +HA LRLCGC
Subjt:  AGKHLEDDLTLADYNISYDCTLHASLRLCGC

XP_008463442.1 PREDICTED: polyubiquitin-like [Cucumis melo]1.5e-2950.68Show/hide
Query:  KSNKNYDVVSNSISIQSVVEAVQALPDMDEDLVLDAFDFLED-ENKAKLFVSMDVKFRKNWLIRKLLPQPQMRILVIVLDGKRIKLDVLPSDTIANVKAK
        +SN +  + ++  SI++V++AV+ALPDMDEDL+LDAFDFL D ENKAK+F+SMD K R+ WLI+KL PQP+M+I V  L+G+++ LDVL +DTI +VKAK
Subjt:  KSNKNYDVVSNSISIQSVVEAVQALPDMDEDLVLDAFDFLED-ENKAKLFVSMDVKFRKNWLIRKLLPQPQMRILVIVLDGKRIKLDVLPSDTIANVKAK

Query:  IQVKGGYRHPSDIWLIYAGKHLEDDLTLADYNISYDCTLHASLRLC
        I+ K GY       L++ G  L+DD TL    +    +LH  L +C
Subjt:  IQVKGGYRHPSDIWLIYAGKHLEDDLTLADYNISYDCTLHASLRLC

XP_022154970.1 ubiquitin-like isoform X1 [Momordica charantia]1.0e-2751.39Show/hide
Query:  KNYDVVSNSISIQSVVEAVQALPDMDEDLVLDAFDFLEDENKAKLFVSMDVKFRKNWLIRKLLPQPQMRILVIVLDGKRIKLDVLPSDTIANVKAKIQVK
        K  D  S SISI +V++AVQALPDMDEDL+LDA DF ++    ++F+++D K RK WL+R L    QM+I V +L GK +  ++L S+TI  VKAKI+  
Subjt:  KNYDVVSNSISIQSVVEAVQALPDMDEDLVLDAFDFLEDENKAKLFVSMDVKFRKNWLIRKLLPQPQMRILVIVLDGKRIKLDVLPSDTIANVKAKIQVK

Query:  GGYRHPSDIWLIYAGKHLEDDLTLADYNISYDCTLHASLRLCGC
         GY  P    LIY G+ LED  TLA+YNI    TLH   RLCGC
Subjt:  GGYRHPSDIWLIYAGKHLEDDLTLADYNISYDCTLHASLRLCGC

XP_022154972.1 ubiquitin-like isoform X2 [Momordica charantia]1.7e-2550.69Show/hide
Query:  KNYDVVSNSISIQSVVEAVQALPDMDEDLVLDAFDFLEDENKAKLFVSMDVKFRKNWLIRKLLPQPQMRILVIVLDGKRIKLDVLPSDTIANVKAKIQVK
        K  D  S SISI +V++AVQALPDMDEDL+LDA DF ++    ++F+++D K RK WL+R L    Q  I V +L GK +  ++L S+TI  VKAKI+  
Subjt:  KNYDVVSNSISIQSVVEAVQALPDMDEDLVLDAFDFLEDENKAKLFVSMDVKFRKNWLIRKLLPQPQMRILVIVLDGKRIKLDVLPSDTIANVKAKIQVK

Query:  GGYRHPSDIWLIYAGKHLEDDLTLADYNISYDCTLHASLRLCGC
         GY  P    LIY G+ LED  TLA+YNI    TLH   RLCGC
Subjt:  GGYRHPSDIWLIYAGKHLEDDLTLADYNISYDCTLHASLRLCGC

TrEMBL top hitse value%identityAlignment
A0A1S3CKU5 polyubiquitin-like7.1e-3050.68Show/hide
Query:  KSNKNYDVVSNSISIQSVVEAVQALPDMDEDLVLDAFDFLED-ENKAKLFVSMDVKFRKNWLIRKLLPQPQMRILVIVLDGKRIKLDVLPSDTIANVKAK
        +SN +  + ++  SI++V++AV+ALPDMDEDL+LDAFDFL D ENKAK+F+SMD K R+ WLI+KL PQP+M+I V  L+G+++ LDVL +DTI +VKAK
Subjt:  KSNKNYDVVSNSISIQSVVEAVQALPDMDEDLVLDAFDFLED-ENKAKLFVSMDVKFRKNWLIRKLLPQPQMRILVIVLDGKRIKLDVLPSDTIANVKAK

Query:  IQVKGGYRHPSDIWLIYAGKHLEDDLTLADYNISYDCTLHASLRLC
        I+ K GY       L++ G  L+DD TL    +    +LH  L +C
Subjt:  IQVKGGYRHPSDIWLIYAGKHLEDDLTLADYNISYDCTLHASLRLC

A0A5D3BMH5 Polyubiquitin-like7.1e-3050.68Show/hide
Query:  KSNKNYDVVSNSISIQSVVEAVQALPDMDEDLVLDAFDFLED-ENKAKLFVSMDVKFRKNWLIRKLLPQPQMRILVIVLDGKRIKLDVLPSDTIANVKAK
        +SN +  + ++  SI++V++AV+ALPDMDEDL+LDAFDFL D ENKAK+F+SMD K R+ WLI+KL PQP+M+I V  L+G+++ LDVL +DTI +VKAK
Subjt:  KSNKNYDVVSNSISIQSVVEAVQALPDMDEDLVLDAFDFLED-ENKAKLFVSMDVKFRKNWLIRKLLPQPQMRILVIVLDGKRIKLDVLPSDTIANVKAK

Query:  IQVKGGYRHPSDIWLIYAGKHLEDDLTLADYNISYDCTLHASLRLC
        I+ K GY       L++ G  L+DD TL    +    +LH  L +C
Subjt:  IQVKGGYRHPSDIWLIYAGKHLEDDLTLADYNISYDCTLHASLRLC

A0A5D3BQI8 Polyubiquitin-like6.8e-2550.38Show/hide
Query:  SVVEAVQALPDMDEDLVLDAFDFLEDENKAKLFVSMDVKFRKNWLIRKLLPQPQMRILVIVLDGKRIKLDVLPSDTIANVKAKIQVKGGYRHPSDIWLIY
        + +EAVQALPD+ EDL+ +AFDFLE    AK+F++++   R  WL RKL  +P   I VI +DG  I L V    TI  +K K+  K GY  P+ + LIY
Subjt:  SVVEAVQALPDMDEDLVLDAFDFLEDENKAKLFVSMDVKFRKNWLIRKLLPQPQMRILVIVLDGKRIKLDVLPSDTIANVKAKIQVKGGYRHPSDIWLIY

Query:  AGKHLEDDLTLADYNISYDCTLHASLRLCGC
        AGK LED  +L+DYNI   C +HA LRLCGC
Subjt:  AGKHLEDDLTLADYNISYDCTLHASLRLCGC

A0A6J1DL46 ubiquitin-like isoform X15.1e-2851.39Show/hide
Query:  KNYDVVSNSISIQSVVEAVQALPDMDEDLVLDAFDFLEDENKAKLFVSMDVKFRKNWLIRKLLPQPQMRILVIVLDGKRIKLDVLPSDTIANVKAKIQVK
        K  D  S SISI +V++AVQALPDMDEDL+LDA DF ++    ++F+++D K RK WL+R L    QM+I V +L GK +  ++L S+TI  VKAKI+  
Subjt:  KNYDVVSNSISIQSVVEAVQALPDMDEDLVLDAFDFLEDENKAKLFVSMDVKFRKNWLIRKLLPQPQMRILVIVLDGKRIKLDVLPSDTIANVKAKIQVK

Query:  GGYRHPSDIWLIYAGKHLEDDLTLADYNISYDCTLHASLRLCGC
         GY  P    LIY G+ LED  TLA+YNI    TLH   RLCGC
Subjt:  GGYRHPSDIWLIYAGKHLEDDLTLADYNISYDCTLHASLRLCGC

A0A6J1DN50 ubiquitin-like isoform X28.1e-2650.69Show/hide
Query:  KNYDVVSNSISIQSVVEAVQALPDMDEDLVLDAFDFLEDENKAKLFVSMDVKFRKNWLIRKLLPQPQMRILVIVLDGKRIKLDVLPSDTIANVKAKIQVK
        K  D  S SISI +V++AVQALPDMDEDL+LDA DF ++    ++F+++D K RK WL+R L    Q  I V +L GK +  ++L S+TI  VKAKI+  
Subjt:  KNYDVVSNSISIQSVVEAVQALPDMDEDLVLDAFDFLEDENKAKLFVSMDVKFRKNWLIRKLLPQPQMRILVIVLDGKRIKLDVLPSDTIANVKAKIQVK

Query:  GGYRHPSDIWLIYAGKHLEDDLTLADYNISYDCTLHASLRLCGC
         GY  P    LIY G+ LED  TLA+YNI    TLH   RLCGC
Subjt:  GGYRHPSDIWLIYAGKHLEDDLTLADYNISYDCTLHASLRLCGC

SwissProt top hitse value%identityAlignment
P18101 Ubiquitin-60S ribosomal protein L403.4e-1359.21Show/hide
Query:  MRILVIVLDGKRIKLDVLPSDTIANVKAKIQVKGGYRHPSDIWLIYAGKHLEDDLTLADYNISYDCTLHASLRLCG
        M+I V  L GK I L+V PSDTI NVKAKIQ K G   P    LI+AGK LED  TL+DYNI  + TLH  LRL G
Subjt:  MRILVIVLDGKRIKLDVLPSDTIANVKAKIQVKGGYRHPSDIWLIYAGKHLEDDLTLADYNISYDCTLHASLRLCG

P46575 Ubiquitin-60S ribosomal protein L401.2e-1360.53Show/hide
Query:  MRILVIVLDGKRIKLDVLPSDTIANVKAKIQVKGGYRHPSDIWLIYAGKHLEDDLTLADYNISYDCTLHASLRLCG
        M+I V  L GK I LDV PSDTI NVKAKIQ K G   P    LI+AGK LED  TL+DYNI  + TLH  LRL G
Subjt:  MRILVIVLDGKRIKLDVLPSDTIANVKAKIQVKGGYRHPSDIWLIYAGKHLEDDLTLADYNISYDCTLHASLRLCG

P63048 Ubiquitin-60S ribosomal protein L403.4e-1359.21Show/hide
Query:  MRILVIVLDGKRIKLDVLPSDTIANVKAKIQVKGGYRHPSDIWLIYAGKHLEDDLTLADYNISYDCTLHASLRLCG
        M+I V  L GK I L+V PSDTI NVKAKIQ K G   P    LI+AGK LED  TL+DYNI  + TLH  LRL G
Subjt:  MRILVIVLDGKRIKLDVLPSDTIANVKAKIQVKGGYRHPSDIWLIYAGKHLEDDLTLADYNISYDCTLHASLRLCG

P63050 Ubiquitin-60S ribosomal protein L403.4e-1359.21Show/hide
Query:  MRILVIVLDGKRIKLDVLPSDTIANVKAKIQVKGGYRHPSDIWLIYAGKHLEDDLTLADYNISYDCTLHASLRLCG
        M+I V  L GK I L+V PSDTI NVKAKIQ K G   P    LI+AGK LED  TL+DYNI  + TLH  LRL G
Subjt:  MRILVIVLDGKRIKLDVLPSDTIANVKAKIQVKGGYRHPSDIWLIYAGKHLEDDLTLADYNISYDCTLHASLRLCG

Q39256 Polyubiquitin 86.8e-1460.53Show/hide
Query:  MRILVIVLDGKRIKLDVLPSDTIANVKAKIQVKGGYRHPSDIWLIYAGKHLEDDLTLADYNISYDCTLHASLRLCG
        M+I V  L GK I L+V  SDTI NVKAKIQ K G   P    LI+AGK LED  TLADYNI  + TLH  LRLCG
Subjt:  MRILVIVLDGKRIKLDVLPSDTIANVKAKIQVKGGYRHPSDIWLIYAGKHLEDDLTLADYNISYDCTLHASLRLCG

Arabidopsis top hitse value%identityAlignment
AT1G23410.1 Ribosomal protein S27a / Ubiquitin family protein1.2e-1359.21Show/hide
Query:  MRILVIVLDGKRIKLDVLPSDTIANVKAKIQVKGGYRHPSDIWLIYAGKHLEDDLTLADYNISYDCTLHASLRLCG
        M+I V  L GK I L+V  SDTI NVKAKIQ K G   P    LI+AGK LED  TLADYNI  + TLH  LRL G
Subjt:  MRILVIVLDGKRIKLDVLPSDTIANVKAKIQVKGGYRHPSDIWLIYAGKHLEDDLTLADYNISYDCTLHASLRLCG

AT1G65350.1 ubiquitin 131.2e-1359.21Show/hide
Query:  MRILVIVLDGKRIKLDVLPSDTIANVKAKIQVKGGYRHPSDIWLIYAGKHLEDDLTLADYNISYDCTLHASLRLCG
        M+I V  L GK I L+V  SDTI NVKAKIQ K G   P    LI+AGK LED  TLADYNI  + TLH  LRL G
Subjt:  MRILVIVLDGKRIKLDVLPSDTIANVKAKIQVKGGYRHPSDIWLIYAGKHLEDDLTLADYNISYDCTLHASLRLCG

AT3G09790.1 ubiquitin 84.9e-1560.53Show/hide
Query:  MRILVIVLDGKRIKLDVLPSDTIANVKAKIQVKGGYRHPSDIWLIYAGKHLEDDLTLADYNISYDCTLHASLRLCG
        M+I V  L GK I L+V  SDTI NVKAKIQ K G   P    LI+AGK LED  TLADYNI  + TLH  LRLCG
Subjt:  MRILVIVLDGKRIKLDVLPSDTIANVKAKIQVKGGYRHPSDIWLIYAGKHLEDDLTLADYNISYDCTLHASLRLCG

AT4G02210.1 unknown protein8.3e-1561.02Show/hide
Query:  SNSISIQSVVEAVQALPDMDEDLVLDAFDFLEDENKAKLFVSMDVKFRKNWLIRKLLPQ
        + ++SI+  VEA+QALPDMD++L+LDA D LED+ KAK F+++DVK RK WL+RKL PQ
Subjt:  SNSISIQSVVEAVQALPDMDEDLVLDAFDFLEDENKAKLFVSMDVKFRKNWLIRKLLPQ

AT4G02210.2 unknown protein8.3e-1561.02Show/hide
Query:  SNSISIQSVVEAVQALPDMDEDLVLDAFDFLEDENKAKLFVSMDVKFRKNWLIRKLLPQ
        + ++SI+  VEA+QALPDMD++L+LDA D LED+ KAK F+++DVK RK WL+RKL PQ
Subjt:  SNSISIQSVVEAVQALPDMDEDLVLDAFDFLEDENKAKLFVSMDVKFRKNWLIRKLLPQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGACAAGTCGAACAAGAACTACGATGTCGTCTCAAACTCCATCTCCATTCAATCAGTCGTCGAAGCTGTCCAAGCATTACCAGACATGGATGAAGATCTTGTATT
GGATGCCTTTGATTTCCTAGAGGATGAAAACAAGGCCAAATTATTTGTTTCAATGGATGTCAAGTTTCGAAAGAATTGGTTGATAAGAAAACTCCTTCCCCAGCCGCAGA
TGCGGATCCTTGTCATAGTTCTTGACGGCAAACGGATAAAGTTAGATGTTTTGCCATCGGATACAATCGCGAATGTGAAGGCTAAAATCCAGGTGAAGGGAGGGTATCGT
CATCCATCCGATATTTGGCTGATTTATGCTGGAAAGCATCTTGAAGATGACCTCACTCTAGCAGACTATAACATCTCATATGATTGCACTTTGCATGCGTCGTTAAGATT
GTGTGGGTGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGACAAGTCGAACAAGAACTACGATGTCGTCTCAAACTCCATCTCCATTCAATCAGTCGTCGAAGCTGTCCAAGCATTACCAGACATGGATGAAGATCTTGTATT
GGATGCCTTTGATTTCCTAGAGGATGAAAACAAGGCCAAATTATTTGTTTCAATGGATGTCAAGTTTCGAAAGAATTGGTTGATAAGAAAACTCCTTCCCCAGCCGCAGA
TGCGGATCCTTGTCATAGTTCTTGACGGCAAACGGATAAAGTTAGATGTTTTGCCATCGGATACAATCGCGAATGTGAAGGCTAAAATCCAGGTGAAGGGAGGGTATCGT
CATCCATCCGATATTTGGCTGATTTATGCTGGAAAGCATCTTGAAGATGACCTCACTCTAGCAGACTATAACATCTCATATGATTGCACTTTGCATGCGTCGTTAAGATT
GTGTGGGTGCTAA
Protein sequenceShow/hide protein sequence
MADKSNKNYDVVSNSISIQSVVEAVQALPDMDEDLVLDAFDFLEDENKAKLFVSMDVKFRKNWLIRKLLPQPQMRILVIVLDGKRIKLDVLPSDTIANVKAKIQVKGGYR
HPSDIWLIYAGKHLEDDLTLADYNISYDCTLHASLRLCGC