| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0047995.1 retrotransposon protein, putative, Ty1-copia sub-class [Cucumis melo var. makuwa] | 2.7e-30 | 34.19 | Show/hide |
Query: GFEYAEVLMVTDKECIDEWILDSECTFHMTPCKHHKLLT--------------------------------------------AELK------NKFERRN
G+E AEVLMV+ ++ D WI+DS CTFHMTP H LT +LK + +R
Subjt: GFEYAEVLMVTDKECIDEWILDSECTFHMTPCKHHKLLT--------------------------------------------AELK------NKFERRN
Query: EQKKQSSRPSVETLPLSVSMLGTQSGGVQTRQRQT------LPPQRLDALRKWYYKSLQRYCAETYRQAVKWAGLFGDKKLPKLSFCEHCALDKAIRNNF
K + T V + GT G+ + T + ++ + ++K L + +E QA+ GL G K +L FCEHC + K+ R F
Subjt: EQKKQSSRPSVETLPLSVSMLGTQSGGVQTRQRQT------LPPQRLDALRKWYYKSLQRYCAETYRQAVKWAGLFGDKKLPKLSFCEHCALDKAIRNNF
Query: KANTYTTQGKLDYIHSDLWGPIRVKTHGGARYFFTIIDDFSRKLWVFLLKSMDEVYNYFLEWKTRIENQTGK
+TT+G LDYIHSDLWGP + + GG+RYF +IIDDFSRK+W++ LK DE + FLEWK ++ENQTG+
Subjt: KANTYTTQGKLDYIHSDLWGPIRVKTHGGARYFFTIIDDFSRKLWVFLLKSMDEVYNYFLEWKTRIENQTGK
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| KAA0050719.1 putative gag-pol polyprotein [Cucumis melo var. makuwa] | 3.5e-30 | 33.82 | Show/hide |
Query: GFEYAEVLMVTDKECIDEWILDSECTFHMTPCKHHKLLT--------------------------------------------AELK------NKFERRN
G+E AEVLMV+ ++ D WI+DS CTFHMTP H LT +LK + +R
Subjt: GFEYAEVLMVTDKECIDEWILDSECTFHMTPCKHHKLLT--------------------------------------------AELK------NKFERRN
Query: EQKKQSSRPSVETLPLSVSMLGTQSGGVQTRQRQT------LPPQRLDALRKWYYKSLQRYCAETYRQAVKWAGLFGDKKLPKLSFCEHCALDKAIRNNF
K + T V + GT G+ + T + ++ + ++K L + +E QA+ GL G K +L FCEHC + K+ R F
Subjt: EQKKQSSRPSVETLPLSVSMLGTQSGGVQTRQRQT------LPPQRLDALRKWYYKSLQRYCAETYRQAVKWAGLFGDKKLPKLSFCEHCALDKAIRNNF
Query: KANTYTTQGKLDYIHSDLWGPIRVKTHGGARYFFTIIDDFSRKLWVFLLKSMDEVYNYFLEWKTRIENQTGK
+TT+G LDY+HSDLWGP + + GG+RYF +IIDDFSRK+W++ LK DE + FLEWK ++ENQTG+
Subjt: KANTYTTQGKLDYIHSDLWGPIRVKTHGGARYFFTIIDDFSRKLWVFLLKSMDEVYNYFLEWKTRIENQTGK
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| KAA0067607.1 retrotransposon protein, putative, Ty1-copia subclass [Cucumis melo var. makuwa] | 2.7e-30 | 33.45 | Show/hide |
Query: NKAAKSENKNSVNMHDGFEYAEVLMVTDKECIDEWILDSECTFHMTPCKHHKLLT--------------------------------------------A
++A ++ N + DG+E AEVLMV+ ++ D WI+DS CTFHMTP H LT
Subjt: NKAAKSENKNSVNMHDGFEYAEVLMVTDKECIDEWILDSECTFHMTPCKHHKLLT--------------------------------------------A
Query: ELK------NKFERRNEQKKQSSRPSVETLPLSVSMLGTQSGGVQTRQRQTLPPQRLDALRKWYYKSL-----QRYCAETYRQAVKWAGLFGDKKLPKLS
+LK + +R K + T V + GT G+ + T+ A K Y + + +E QA+ GL K +LS
Subjt: ELK------NKFERRNEQKKQSSRPSVETLPLSVSMLGTQSGGVQTRQRQTLPPQRLDALRKWYYKSL-----QRYCAETYRQAVKWAGLFGDKKLPKLS
Query: FCEHCALDKAIRNNFKANTYTTQGKLDYIHSDLWGPIRVKTHGGARYFFTIIDDFSRKLWVFLLKSMDEVYNYFLEWKTRIENQTGK
FCEHC + K R F +TT+G LDY+HSDLWGP + GG+RYF +IIDDFSRK+W++ LK DE + FLEWK ++E QTGK
Subjt: FCEHCALDKAIRNNFKANTYTTQGKLDYIHSDLWGPIRVKTHGGARYFFTIIDDFSRKLWVFLLKSMDEVYNYFLEWKTRIENQTGK
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| TYK13826.1 putative polyprotein [Cucumis melo var. makuwa] | 3.5e-30 | 33.82 | Show/hide |
Query: GFEYAEVLMVTDKECIDEWILDSECTFHMTPCKHHKLLT--------------------------------------------AELK------NKFERRN
G+E AEVLMV+ ++ D WI+DS CTFHMTP H LT +LK + +R
Subjt: GFEYAEVLMVTDKECIDEWILDSECTFHMTPCKHHKLLT--------------------------------------------AELK------NKFERRN
Query: EQKKQSSRPSVETLPLSVSMLGTQSGGVQTRQRQT------LPPQRLDALRKWYYKSLQRYCAETYRQAVKWAGLFGDKKLPKLSFCEHCALDKAIRNNF
K + T V + GT G+ + T + ++ + ++K L + +E QA+ GL G K +L FCEHC + K+ R F
Subjt: EQKKQSSRPSVETLPLSVSMLGTQSGGVQTRQRQT------LPPQRLDALRKWYYKSLQRYCAETYRQAVKWAGLFGDKKLPKLSFCEHCALDKAIRNNF
Query: KANTYTTQGKLDYIHSDLWGPIRVKTHGGARYFFTIIDDFSRKLWVFLLKSMDEVYNYFLEWKTRIENQTGK
+TT+G LDY+HSDLWGP + + GG+RYF +IIDDFSRK+W++ LK DE + FLEWK ++ENQTG+
Subjt: KANTYTTQGKLDYIHSDLWGPIRVKTHGGARYFFTIIDDFSRKLWVFLLKSMDEVYNYFLEWKTRIENQTGK
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| TYK25306.1 putative gag-pol polyprotein [Cucumis melo var. makuwa] | 3.5e-30 | 33.82 | Show/hide |
Query: GFEYAEVLMVTDKECIDEWILDSECTFHMTPCKHHKLLT--------------------------------------------AELK------NKFERRN
G+E AEVLMV+ ++ D WI+DS CTFHMTP H LT +LK + +R
Subjt: GFEYAEVLMVTDKECIDEWILDSECTFHMTPCKHHKLLT--------------------------------------------AELK------NKFERRN
Query: EQKKQSSRPSVETLPLSVSMLGTQSGGVQTRQRQT------LPPQRLDALRKWYYKSLQRYCAETYRQAVKWAGLFGDKKLPKLSFCEHCALDKAIRNNF
K + T V + GT G+ + T + ++ + ++K L + +E QA+ GL G K +L FCEHC + K+ R F
Subjt: EQKKQSSRPSVETLPLSVSMLGTQSGGVQTRQRQT------LPPQRLDALRKWYYKSLQRYCAETYRQAVKWAGLFGDKKLPKLSFCEHCALDKAIRNNF
Query: KANTYTTQGKLDYIHSDLWGPIRVKTHGGARYFFTIIDDFSRKLWVFLLKSMDEVYNYFLEWKTRIENQTGK
+TT+G LDY+HSDLWGP + + GG+RYF +IIDDFSRK+W++ LK DE + FLEWK ++ENQTG+
Subjt: KANTYTTQGKLDYIHSDLWGPIRVKTHGGARYFFTIIDDFSRKLWVFLLKSMDEVYNYFLEWKTRIENQTGK
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7U2U7 Retrotransposon protein, putative, Ty1-copia sub-class | 1.3e-30 | 34.19 | Show/hide |
Query: GFEYAEVLMVTDKECIDEWILDSECTFHMTPCKHHKLLT--------------------------------------------AELK------NKFERRN
G+E AEVLMV+ ++ D WI+DS CTFHMTP H LT +LK + +R
Subjt: GFEYAEVLMVTDKECIDEWILDSECTFHMTPCKHHKLLT--------------------------------------------AELK------NKFERRN
Query: EQKKQSSRPSVETLPLSVSMLGTQSGGVQTRQRQT------LPPQRLDALRKWYYKSLQRYCAETYRQAVKWAGLFGDKKLPKLSFCEHCALDKAIRNNF
K + T V + GT G+ + T + ++ + ++K L + +E QA+ GL G K +L FCEHC + K+ R F
Subjt: EQKKQSSRPSVETLPLSVSMLGTQSGGVQTRQRQT------LPPQRLDALRKWYYKSLQRYCAETYRQAVKWAGLFGDKKLPKLSFCEHCALDKAIRNNF
Query: KANTYTTQGKLDYIHSDLWGPIRVKTHGGARYFFTIIDDFSRKLWVFLLKSMDEVYNYFLEWKTRIENQTGK
+TT+G LDYIHSDLWGP + + GG+RYF +IIDDFSRK+W++ LK DE + FLEWK ++ENQTG+
Subjt: KANTYTTQGKLDYIHSDLWGPIRVKTHGGARYFFTIIDDFSRKLWVFLLKSMDEVYNYFLEWKTRIENQTGK
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| A0A5A7UB25 Putative gag-pol polyprotein | 1.7e-30 | 33.82 | Show/hide |
Query: GFEYAEVLMVTDKECIDEWILDSECTFHMTPCKHHKLLT--------------------------------------------AELK------NKFERRN
G+E AEVLMV+ ++ D WI+DS CTFHMTP H LT +LK + +R
Subjt: GFEYAEVLMVTDKECIDEWILDSECTFHMTPCKHHKLLT--------------------------------------------AELK------NKFERRN
Query: EQKKQSSRPSVETLPLSVSMLGTQSGGVQTRQRQT------LPPQRLDALRKWYYKSLQRYCAETYRQAVKWAGLFGDKKLPKLSFCEHCALDKAIRNNF
K + T V + GT G+ + T + ++ + ++K L + +E QA+ GL G K +L FCEHC + K+ R F
Subjt: EQKKQSSRPSVETLPLSVSMLGTQSGGVQTRQRQT------LPPQRLDALRKWYYKSLQRYCAETYRQAVKWAGLFGDKKLPKLSFCEHCALDKAIRNNF
Query: KANTYTTQGKLDYIHSDLWGPIRVKTHGGARYFFTIIDDFSRKLWVFLLKSMDEVYNYFLEWKTRIENQTGK
+TT+G LDY+HSDLWGP + + GG+RYF +IIDDFSRK+W++ LK DE + FLEWK ++ENQTG+
Subjt: KANTYTTQGKLDYIHSDLWGPIRVKTHGGARYFFTIIDDFSRKLWVFLLKSMDEVYNYFLEWKTRIENQTGK
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| A0A5A7VKC2 Retrotransposon protein, putative, Ty1-copia subclass | 1.3e-30 | 33.45 | Show/hide |
Query: NKAAKSENKNSVNMHDGFEYAEVLMVTDKECIDEWILDSECTFHMTPCKHHKLLT--------------------------------------------A
++A ++ N + DG+E AEVLMV+ ++ D WI+DS CTFHMTP H LT
Subjt: NKAAKSENKNSVNMHDGFEYAEVLMVTDKECIDEWILDSECTFHMTPCKHHKLLT--------------------------------------------A
Query: ELK------NKFERRNEQKKQSSRPSVETLPLSVSMLGTQSGGVQTRQRQTLPPQRLDALRKWYYKSL-----QRYCAETYRQAVKWAGLFGDKKLPKLS
+LK + +R K + T V + GT G+ + T+ A K Y + + +E QA+ GL K +LS
Subjt: ELK------NKFERRNEQKKQSSRPSVETLPLSVSMLGTQSGGVQTRQRQTLPPQRLDALRKWYYKSL-----QRYCAETYRQAVKWAGLFGDKKLPKLS
Query: FCEHCALDKAIRNNFKANTYTTQGKLDYIHSDLWGPIRVKTHGGARYFFTIIDDFSRKLWVFLLKSMDEVYNYFLEWKTRIENQTGK
FCEHC + K R F +TT+G LDY+HSDLWGP + GG+RYF +IIDDFSRK+W++ LK DE + FLEWK ++E QTGK
Subjt: FCEHCALDKAIRNNFKANTYTTQGKLDYIHSDLWGPIRVKTHGGARYFFTIIDDFSRKLWVFLLKSMDEVYNYFLEWKTRIENQTGK
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| A0A5D3CTV2 Putative polyprotein | 1.7e-30 | 33.82 | Show/hide |
Query: GFEYAEVLMVTDKECIDEWILDSECTFHMTPCKHHKLLT--------------------------------------------AELK------NKFERRN
G+E AEVLMV+ ++ D WI+DS CTFHMTP H LT +LK + +R
Subjt: GFEYAEVLMVTDKECIDEWILDSECTFHMTPCKHHKLLT--------------------------------------------AELK------NKFERRN
Query: EQKKQSSRPSVETLPLSVSMLGTQSGGVQTRQRQT------LPPQRLDALRKWYYKSLQRYCAETYRQAVKWAGLFGDKKLPKLSFCEHCALDKAIRNNF
K + T V + GT G+ + T + ++ + ++K L + +E QA+ GL G K +L FCEHC + K+ R F
Subjt: EQKKQSSRPSVETLPLSVSMLGTQSGGVQTRQRQT------LPPQRLDALRKWYYKSLQRYCAETYRQAVKWAGLFGDKKLPKLSFCEHCALDKAIRNNF
Query: KANTYTTQGKLDYIHSDLWGPIRVKTHGGARYFFTIIDDFSRKLWVFLLKSMDEVYNYFLEWKTRIENQTGK
+TT+G LDY+HSDLWGP + + GG+RYF +IIDDFSRK+W++ LK DE + FLEWK ++ENQTG+
Subjt: KANTYTTQGKLDYIHSDLWGPIRVKTHGGARYFFTIIDDFSRKLWVFLLKSMDEVYNYFLEWKTRIENQTGK
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| A0A5D3DNU1 Putative gag-pol polyprotein | 1.7e-30 | 33.82 | Show/hide |
Query: GFEYAEVLMVTDKECIDEWILDSECTFHMTPCKHHKLLT--------------------------------------------AELK------NKFERRN
G+E AEVLMV+ ++ D WI+DS CTFHMTP H LT +LK + +R
Subjt: GFEYAEVLMVTDKECIDEWILDSECTFHMTPCKHHKLLT--------------------------------------------AELK------NKFERRN
Query: EQKKQSSRPSVETLPLSVSMLGTQSGGVQTRQRQT------LPPQRLDALRKWYYKSLQRYCAETYRQAVKWAGLFGDKKLPKLSFCEHCALDKAIRNNF
K + T V + GT G+ + T + ++ + ++K L + +E QA+ GL G K +L FCEHC + K+ R F
Subjt: EQKKQSSRPSVETLPLSVSMLGTQSGGVQTRQRQT------LPPQRLDALRKWYYKSLQRYCAETYRQAVKWAGLFGDKKLPKLSFCEHCALDKAIRNNF
Query: KANTYTTQGKLDYIHSDLWGPIRVKTHGGARYFFTIIDDFSRKLWVFLLKSMDEVYNYFLEWKTRIENQTGK
+TT+G LDY+HSDLWGP + + GG+RYF +IIDDFSRK+W++ LK DE + FLEWK ++ENQTG+
Subjt: KANTYTTQGKLDYIHSDLWGPIRVKTHGGARYFFTIIDDFSRKLWVFLLKSMDEVYNYFLEWKTRIENQTGK
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 2.1e-14 | 38.37 | Show/hide |
Query: CEHCALDKAIRNNFKANTYTTQGKLDYIHSDLWGPIRVKTHGGARYFFTIIDDFSRKLWVFLLKSMDEVYNYFLEWKTRIENQTGK
C++C K R +F+ ++ LD ++SD+ GP+ +++ GG +YF T IDD SRKLWV++LK+ D+V+ F ++ +E +TG+
Subjt: CEHCALDKAIRNNFKANTYTTQGKLDYIHSDLWGPIRVKTHGGARYFFTIIDDFSRKLWVFLLKSMDEVYNYFLEWKTRIENQTGK
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| P93293 Uncharacterized mitochondrial protein AtMg00300 | 1.3e-06 | 33.71 | Show/hide |
Query: GGVQTRQRQTLPPQRLDALRKWYYKSLQRYCAETYRQAVKWAGLFGDKKLPKLSFCEHCALDKAIRNNFKANTYTTQGKLDYIHSDLWG
G V+T + L D R W+ S + ++ + + G K+ L FCE C K R NF +TT+ LDY+HSDLWG
Subjt: GGVQTRQRQTLPPQRLDALRKWYYKSLQRYCAETYRQAVKWAGLFGDKKLPKLSFCEHCALDKAIRNNFKANTYTTQGKLDYIHSDLWG
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 1.9e-07 | 31.03 | Show/hide |
Query: KLSFCEHCALDKAIRNNFKANTYTTQGKLDYIHSDLWGPIRVKTHGGARYFFTIIDDFSRKLWVFLLKSMDEVYNYFLEWKTRIENQ
KL C C ++K+ + F +T T+ L+YI+SD+W + + RY+ +D F+R W++ LK +V + F+ +K+ +EN+
Subjt: KLSFCEHCALDKAIRNNFKANTYTTQGKLDYIHSDLWGPIRVKTHGGARYFFTIIDDFSRKLWVFLLKSMDEVYNYFLEWKTRIENQ
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