; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0018570 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0018570
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon RE1
Genome locationchr5:29769881..29772651
RNA-Seq ExpressionLag0018570
SyntenyLag0018570
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
InterPro domainsIPR012337 - Ribonuclease H-like superfamily
IPR013103 - Reverse transcriptase, RNA-dependent DNA polymerase
IPR036397 - Ribonuclease H superfamily
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN73924.1 hypothetical protein VITISV_041509 [Vitis vinifera]9.3e-10746.76Show/hide
Query:  HQPQQNGRAERKNRHVVEIDLSLLDHSDMPLVSWSFAFQTAVYIINRLPTVVLKSNSLYYMLYHRLPDYFVLRSFGCACFPFLRHFNDHKLLFWSTECLF
        H PQQNGRAERK RH+VE  L+L+  S +P   W++AFQTAVY+IN LP  +L   S    L+H+LP+Y  LR FGC CFP LR +  HKL + ST C+F
Subjt:  HQPQQNGRAERKNRHVVEIDLSLLDHSDMPLVSWSFAFQTAVYIINRLPTVVLKSNSLYYMLYHRLPDYFVLRSFGCACFPFLRHFNDHKLLFWSTECLF

Query:  IGYSTNHKAPFLLPLISPSQFPSSPCISSSSFDSLPLEVISSPTSSIPLGFASIATPAAHHQPAMSSPHLTPTSALPQSTSPITPPYTSSPPFISSLLPI
        +GY+  HK    L + +   + S   I   S  S P +  S P+S  P      +TPA  + P++S+P  +P  + P  TS   PP    P   SS  P 
Subjt:  IGYSTNHKAPFLLPLISPSQFPSSPCISSSSFDSLPLEVISSPTSSIPLGFASIATPAAHHQPAMSSPHLTPTSALPQSTSPITPPYTSSPPFISSLLPI

Query:  SPSPLPSPHIVPTNIHPMIIRAKAGIHKPKCSRASSTTSTLPLVEPTSFKVAIKSDEWRDTMDKEYKALIQNNTWILVPPSPAYKLVSYKWVYRIKPKHD
        +PSP P    +P N HPM+ RAK+GIHK +      TT      EP ++  A K+D W   M+ EY+AL++NNTW LVPP  +  +V  +W+Y++K + D
Subjt:  SPSPLPSPHIVPTNIHPMIIRAKAGIHKPKCSRASSTTSTLPLVEPTSFKVAIKSDEWRDTMDKEYKALIQNNTWILVPPSPAYKLVSYKWVYRIKPKHD

Query:  GSVERYKPRLVARGFDQTHGIVYFETFNPIIKLSTIRIVLSLVVRYNWMIKQLDVHNVFLNGDLYEDVFMIQPSGFVDKVKLDHVCKLKKALYGLKQSPH
        GS++R+K RLVA+GF QT GI YF+TF+P++K  TIR++L+L V + W ++QLDV N FLNGDL E+VFM QP GFV+     +VCKL KALYGLKQ+P 
Subjt:  GSVERYKPRLVARGFDQTHGIVYFETFNPIIKLSTIRIVLSLVVRYNWMIKQLDVHNVFLNGDLYEDVFMIQPSGFVDKVKLDHVCKLKKALYGLKQSPH

Query:  EWFMKLSSCLVSWDFKASKLDSSLFYYRKLSIFVVVLVYVDDIIVTGNDSGYIQIFILSLNKLFALKDLGNLSYFLGIE
         WF KL   L+ + F++S+ D+SLF +   +  +++LVYVDDI+VTG++   +  FI  L   FAL+DLG LSYFLGI+
Subjt:  EWFMKLSSCLVSWDFKASKLDSSLFYYRKLSIFVVVLVYVDDIIVTGNDSGYIQIFILSLNKLFALKDLGNLSYFLGIE

CAN79148.1 hypothetical protein VITISV_004343 [Vitis vinifera]1.6e-10646.76Show/hide
Query:  HQPQQNGRAERKNRHVVEIDLSLLDHSDMPLVSWSFAFQTAVYIINRLPTVVLKSNSLYYMLYHRLPDYFVLRSFGCACFPFLRHFNDHKLLFWSTECLF
        H PQQNGRAERK RH+VE  L+L+  S +P   W++AFQTAVY+IN LP  +L   S    L+H+LP+Y  LR FGC CFP LR +  HKL + ST C+F
Subjt:  HQPQQNGRAERKNRHVVEIDLSLLDHSDMPLVSWSFAFQTAVYIINRLPTVVLKSNSLYYMLYHRLPDYFVLRSFGCACFPFLRHFNDHKLLFWSTECLF

Query:  IGYSTNHKAPFLLPLISPSQFPSSPCISSSSFDSLPLEVISSPTSSIPLGFASIATPAAHHQPAMSSPHLTPTSALPQSTSPITPPYTSSPPFISSLLPI
        +GY+  HK    L + +   + S   I   S  S P +  S P+S  P      +TPA  + P++S+P  +P  + P  TS   PP    P   SS  P 
Subjt:  IGYSTNHKAPFLLPLISPSQFPSSPCISSSSFDSLPLEVISSPTSSIPLGFASIATPAAHHQPAMSSPHLTPTSALPQSTSPITPPYTSSPPFISSLLPI

Query:  SPSPLPSPHIVPTNIHPMIIRAKAGIHKPKCSRASSTTSTLPLVEPTSFKVAIKSDEWRDTMDKEYKALIQNNTWILVPPSPAYKLVSYKWVYRIKPKHD
        +PSP P    +P N HPM+ RAK+GIHK +      TT      EP ++  A K+D W   M+ EY+AL++NNTW LVPP  +  +V  +W+Y++K + D
Subjt:  SPSPLPSPHIVPTNIHPMIIRAKAGIHKPKCSRASSTTSTLPLVEPTSFKVAIKSDEWRDTMDKEYKALIQNNTWILVPPSPAYKLVSYKWVYRIKPKHD

Query:  GSVERYKPRLVARGFDQTHGIVYFETFNPIIKLSTIRIVLSLVVRYNWMIKQLDVHNVFLNGDLYEDVFMIQPSGFVDKVKLDHVCKLKKALYGLKQSPH
        GS++R+K RLVA+GF QT GI YF+TF+P++K  TIR++L+L V + W ++QLDV N FLNGDL E+VFM QP GFV+     +VCKL KALYGLKQ+P 
Subjt:  GSVERYKPRLVARGFDQTHGIVYFETFNPIIKLSTIRIVLSLVVRYNWMIKQLDVHNVFLNGDLYEDVFMIQPSGFVDKVKLDHVCKLKKALYGLKQSPH

Query:  EWFMKLSSCLVSWDFKASKLDSSLFYYRKLSIFVVVLVYVDDIIVTGNDSGYIQIFILSLNKLFALKDLGNLSYFLGIE
         WF KL   L+ + F++S+ D+SLF +   +  +++LVYVDDI+VTG++   +  FI  L   FAL+DLG LSYFLGI+
Subjt:  EWFMKLSSCLVSWDFKASKLDSSLFYYRKLSIFVVVLVYVDDIIVTGNDSGYIQIFILSLNKLFALKDLGNLSYFLGIE

RVW89006.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]1.2e-10643.07Show/hide
Query:  SHQPQQNGRAERKNRHVVEIDLSLLDHSDMPLVSWSFAFQTAVYIINRLPTVVLKSNSLYYMLYHRLPDYFVLRSFGCACFPFLRHFNDHKLLFWSTECL
        S+   QNGR ERK+RHVVE  L+LL H+ +PL  WS+AFQTA ++INR+P+ VL++ S Y+ L+ R PDY  LR FGC C+PF+R +N+HKL + S +C+
Subjt:  SHQPQQNGRAERKNRHVVEIDLSLLDHSDMPLVSWSFAFQTAVYIINRLPTVVLKSNSLYYMLYHRLPDYFVLRSFGCACFPFLRHFNDHKLLFWSTECL

Query:  FIGYSTNHKAPFLLP------LISP------SQFPSSPCISSS-SFDSLPLEVISSPTSSIPLGFASIATPAAHHQPAMSSPHLTPTSALPQSTSPITPP
        F+GYS +HK    L        +SP      +QFP +  ISSS S D+    VI  P   +    ++++   ++H  +M+SP+L  TSALP +T P   P
Subjt:  FIGYSTNHKAPFLLP------LISP------SQFPSSPCISSS-SFDSLPLEVISSPTSSIPLGFASIATPAAHHQPAMSSPHLTPTSALPQSTSPITPP

Query:  YTSSPPFISSLLPISPSPLPSPHIVPTNIHPMIIRAKAGIHKPKCSRASSTTSTLPLVEPTSFKVAIKSDEWRDTMDKEYKALIQNNTWILVPPSPAYKL
         T S     S+L    + LP+   V      +  R+ +GI K K        +   + EPT+ K AIK   W + M  E  AL +N TW LV P     +
Subjt:  YTSSPPFISSLLPISPSPLPSPHIVPTNIHPMIIRAKAGIHKPKCSRASSTTSTLPLVEPTSFKVAIKSDEWRDTMDKEYKALIQNNTWILVPPSPAYKL

Query:  VSYKWVYRIKPKHDGSVERYKPRLVARGFDQTHGIVYFETFNPIIKLSTIRIVLSLVVRYNWMIKQLDVHNVFLNGDLYEDVFMIQPSGFVDKVKLDHVC
        +  KWVY++K K DGSV+RYK RLVARGF+QT G+ YFETF+P++K +TIRIVL++ + Y W ++QLDV N FLNGDL E V+M QP GF+     + VC
Subjt:  VSYKWVYRIKPKHDGSVERYKPRLVARGFDQTHGIVYFETFNPIIKLSTIRIVLSLVVRYNWMIKQLDVHNVFLNGDLYEDVFMIQPSGFVDKVKLDHVC

Query:  KLKKALYGLKQSPHEWFMKLSSCLVSWDFKASKLDSSLFYYRKLSIFVVVLVYVDDIIVTGNDSGYIQIFILSLNKLFALKDLGNLSYFLGIEVCRDSNS
        KLKKALYGLKQSP  WF KLSS L+SW F +S+ DSS+F +      ++VLVYVDDIIVTG+    IQ  I  L+ LFAL+DLG LSYFLGIEV  D   
Subjt:  KLKKALYGLKQSPHEWFMKLSSCLVSWDFKASKLDSSLFYYRKLSIFVVVLVYVDDIIVTGNDSGYIQIFILSLNKLFALKDLGNLSYFLGIEVCRDSNS

Query:  VTPETVGDIGECRGREVSNPDFESWAWGVTDGIRAGIGLRECRGREVPNPDSESWAWGVTNSLHLSQHTYFQDLLQRADMLSCKIMATPMVV
                                                                     S+HLSQ  Y  DLLQR  ML  K  ATP  V
Subjt:  VTPETVGDIGECRGREVSNPDFESWAWGVTDGIRAGIGLRECRGREVPNPDSESWAWGVTNSLHLSQHTYFQDLLQRADMLSCKIMATPMVV

RVX10285.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]2.1e-10647.3Show/hide
Query:  HQPQQNGRAERKNRHVVEIDLSLLDHSDMPLVSWSFAFQTAVYIINRLPTVVLKSNSLYYMLYHRLPDYFVLRSFGCACFPFLRHFNDHKLLFWSTECLF
        H PQQNGRAERK RH+VE  ++LL  S +P   WSFAFQT+VY+IN LP  +L   S   +++H++P+Y  LR FGC CFP LR +N HKL + ST C+F
Subjt:  HQPQQNGRAERKNRHVVEIDLSLLDHSDMPLVSWSFAFQTAVYIINRLPTVVLKSNSLYYMLYHRLPDYFVLRSFGCACFPFLRHFNDHKLLFWSTECLF

Query:  IGYSTNHKAPFLLPLISPSQFPSSPCI---SSSSFDSLPLEVISSPTSSIPLGFASIATPAAHHQPAMSSPHLTPTSALPQSTSPITPPYTSSPPFISSL
        +GY++ HK    L + +   + S   +   SS  F S+P    S      PL  A I  P      + SSP  T +  +P S++  T    S PP +   
Subjt:  IGYSTNHKAPFLLPLISPSQFPSSPCI---SSSSFDSLPLEVISSPTSSIPLGFASIATPAAHHQPAMSSPHLTPTSALPQSTSPITPPYTSSPPFISSL

Query:  LPISPSPLPSPHIVPTNIHPMIIRAKAGIHKPKCSRASSTTSTLPLVEPTSFKVAIKSDEWRDTMDKEYKALIQNNTWILVPPSPAYKLVSYKWVYRIKP
           +PSP PS    P N HPM+ RAK+GIHK K S    TTS     EP ++  A KS+ W   M  EY+AL++N+TW LVPP P+  +V  +W+Y++K 
Subjt:  LPISPSPLPSPHIVPTNIHPMIIRAKAGIHKPKCSRASSTTSTLPLVEPTSFKVAIKSDEWRDTMDKEYKALIQNNTWILVPPSPAYKLVSYKWVYRIKP

Query:  KHDGSVERYKPRLVARGFDQTHGIVYFETFNPIIKLSTIRIVLSLVVRYNWMIKQLDVHNVFLNGDLYEDVFMIQPSGFVDKVKLDHVCKLKKALYGLKQ
          +GSVER+K RLVA+GF QT G+ YF+TF+P++K  TIR++L+L V + W I+QLDV N FLNGDL E+VFM QP GFV      +VCKL KALYGLKQ
Subjt:  KHDGSVERYKPRLVARGFDQTHGIVYFETFNPIIKLSTIRIVLSLVVRYNWMIKQLDVHNVFLNGDLYEDVFMIQPSGFVDKVKLDHVCKLKKALYGLKQ

Query:  SPHEWFMKLSSCLVSWDFKASKLDSSLFYYRKLSIFVVVLVYVDDIIVTGNDSGYIQIFILSLNKLFALKDLGNLSYFLGIE
        +P  WF KL   LV + F++S+ D+SLF +   S  +++LVYVDDI+VTG++   +  FI  L++ FAL+DLG LSYFLGI+
Subjt:  SPHEWFMKLSSCLVSWDFKASKLDSSLFYYRKLSIFVVVLVYVDDIIVTGNDSGYIQIFILSLNKLFALKDLGNLSYFLGIE

RVX14515.1 Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera]6.2e-11948.21Show/hide
Query:  QQNGRAERKNRHVVEIDLSLLDHSDMPLVSWSFAFQTAVYIINRLPTVVLKSNSLYYMLYHRLPDYFVLRSFGCACFPFLRHFNDHKLLFWSTECLFIGY
        QQNGR ERK+RHVVE+ LSLL H+ +PL  W FAFQ+A+Y+INRLP+ VL  +S Y  LYH LP+Y  LR +GC C+PFLR FN HK  + S +C FIGY
Subjt:  QQNGRAERKNRHVVEIDLSLLDHSDMPLVSWSFAFQTAVYIINRLPTVVLKSNSLYYMLYHRLPDYFVLRSFGCACFPFLRHFNDHKLLFWSTECLFIGY

Query:  STNHKAPFLLPLISPSQFPSSPCI-SSSSFDSLPLEVISSPTSSIPLGFASIATPAAHHQPAMSSPHLTPTSALPQSTSP---ITPPYTSSPPFISSLLP
        ++ HK    L + +     S   I     F       + SP    P           H    ++SP    +S LP S+SP   + P   +S    SS + 
Subjt:  STNHKAPFLLPLISPSQFPSSPCI-SSSSFDSLPLEVISSPTSSIPLGFASIATPAAHHQPAMSSPHLTPTSALPQSTSP---ITPPYTSSPPFISSLLP

Query:  ISPSPLPSPHIVPTNIHPMIIRAKAGIHKPKCSRASSTTSTLPLVEPTSFKVAIKSDEWRDTMDKEYKALIQNNTWILVPPSPAYKLVSYKWVYRIKPKH
          P+  PS   V +  HPM  RAK GI KPK   + + T   PL EP SFK A+K  EW+  M  E++AL+ N TW+LVPP P   ++  +WVY++K K 
Subjt:  ISPSPLPSPHIVPTNIHPMIIRAKAGIHKPKCSRASSTTSTLPLVEPTSFKVAIKSDEWRDTMDKEYKALIQNNTWILVPPSPAYKLVSYKWVYRIKPKH

Query:  DGSVERYKPRLVARGFDQTHGIVYFETFNPIIKLSTIRIVLSLVVRYNWMIKQLDVHNVFLNGDLYEDVFMIQPSGFVDKVKLDHVCKLKKALYGLKQSP
        DG+VERYK RLVA+GF QT G  YFETF+P++K +TIR+VLSL +  NW I+QLDVHN FLNGDL E VFM QP GFVD  K + VCKL KALYGLKQ+P
Subjt:  DGSVERYKPRLVARGFDQTHGIVYFETFNPIIKLSTIRIVLSLVVRYNWMIKQLDVHNVFLNGDLYEDVFMIQPSGFVDKVKLDHVCKLKKALYGLKQSP

Query:  HEWFMKLSSCLVSWDFKASKLDSSLFYYRKLSIFVVVLVYVDDIIVTGNDSGYIQIFILSLNKLFALKDLGNLSYFLGIEVCRDSNSV---TPETVGDIG
        H WF KLSS LV W F  S+ D+S+F Y   S+ +VVLVYVDDIIVTG  S  I+  I SLN  FALKDLG L++FLGIEV    +S+     + + D+ 
Subjt:  HEWFMKLSSCLVSWDFKASKLDSSLFYYRKLSIFVVVLVYVDDIIVTGNDSGYIQIFILSLNKLFALKDLGNLSYFLGIEVCRDSNSV---TPETVGDIG

Query:  ECRGREVSNPDFESWAWGVTDGIRAGIGLRE
        +C G   S       A G+   I  G  L +
Subjt:  ECRGREVSNPDFESWAWGVTDGIRAGIGLRE

TrEMBL top hitse value%identityAlignment
A0A438HX37 Retrovirus-related Pol polyprotein from transposon TNT 1-945.9e-10743.07Show/hide
Query:  SHQPQQNGRAERKNRHVVEIDLSLLDHSDMPLVSWSFAFQTAVYIINRLPTVVLKSNSLYYMLYHRLPDYFVLRSFGCACFPFLRHFNDHKLLFWSTECL
        S+   QNGR ERK+RHVVE  L+LL H+ +PL  WS+AFQTA ++INR+P+ VL++ S Y+ L+ R PDY  LR FGC C+PF+R +N+HKL + S +C+
Subjt:  SHQPQQNGRAERKNRHVVEIDLSLLDHSDMPLVSWSFAFQTAVYIINRLPTVVLKSNSLYYMLYHRLPDYFVLRSFGCACFPFLRHFNDHKLLFWSTECL

Query:  FIGYSTNHKAPFLLP------LISP------SQFPSSPCISSS-SFDSLPLEVISSPTSSIPLGFASIATPAAHHQPAMSSPHLTPTSALPQSTSPITPP
        F+GYS +HK    L        +SP      +QFP +  ISSS S D+    VI  P   +    ++++   ++H  +M+SP+L  TSALP +T P   P
Subjt:  FIGYSTNHKAPFLLP------LISP------SQFPSSPCISSS-SFDSLPLEVISSPTSSIPLGFASIATPAAHHQPAMSSPHLTPTSALPQSTSPITPP

Query:  YTSSPPFISSLLPISPSPLPSPHIVPTNIHPMIIRAKAGIHKPKCSRASSTTSTLPLVEPTSFKVAIKSDEWRDTMDKEYKALIQNNTWILVPPSPAYKL
         T S     S+L    + LP+   V      +  R+ +GI K K        +   + EPT+ K AIK   W + M  E  AL +N TW LV P     +
Subjt:  YTSSPPFISSLLPISPSPLPSPHIVPTNIHPMIIRAKAGIHKPKCSRASSTTSTLPLVEPTSFKVAIKSDEWRDTMDKEYKALIQNNTWILVPPSPAYKL

Query:  VSYKWVYRIKPKHDGSVERYKPRLVARGFDQTHGIVYFETFNPIIKLSTIRIVLSLVVRYNWMIKQLDVHNVFLNGDLYEDVFMIQPSGFVDKVKLDHVC
        +  KWVY++K K DGSV+RYK RLVARGF+QT G+ YFETF+P++K +TIRIVL++ + Y W ++QLDV N FLNGDL E V+M QP GF+     + VC
Subjt:  VSYKWVYRIKPKHDGSVERYKPRLVARGFDQTHGIVYFETFNPIIKLSTIRIVLSLVVRYNWMIKQLDVHNVFLNGDLYEDVFMIQPSGFVDKVKLDHVC

Query:  KLKKALYGLKQSPHEWFMKLSSCLVSWDFKASKLDSSLFYYRKLSIFVVVLVYVDDIIVTGNDSGYIQIFILSLNKLFALKDLGNLSYFLGIEVCRDSNS
        KLKKALYGLKQSP  WF KLSS L+SW F +S+ DSS+F +      ++VLVYVDDIIVTG+    IQ  I  L+ LFAL+DLG LSYFLGIEV  D   
Subjt:  KLKKALYGLKQSPHEWFMKLSSCLVSWDFKASKLDSSLFYYRKLSIFVVVLVYVDDIIVTGNDSGYIQIFILSLNKLFALKDLGNLSYFLGIEVCRDSNS

Query:  VTPETVGDIGECRGREVSNPDFESWAWGVTDGIRAGIGLRECRGREVPNPDSESWAWGVTNSLHLSQHTYFQDLLQRADMLSCKIMATPMVV
                                                                     S+HLSQ  Y  DLLQR  ML  K  ATP  V
Subjt:  VTPETVGDIGECRGREVSNPDFESWAWGVTDGIRAGIGLRECRGREVPNPDSESWAWGVTNSLHLSQHTYFQDLLQRADMLSCKIMATPMVV

A0A438JMW5 Retrovirus-related Pol polyprotein from transposon TNT 1-941.0e-10647.3Show/hide
Query:  HQPQQNGRAERKNRHVVEIDLSLLDHSDMPLVSWSFAFQTAVYIINRLPTVVLKSNSLYYMLYHRLPDYFVLRSFGCACFPFLRHFNDHKLLFWSTECLF
        H PQQNGRAERK RH+VE  ++LL  S +P   WSFAFQT+VY+IN LP  +L   S   +++H++P+Y  LR FGC CFP LR +N HKL + ST C+F
Subjt:  HQPQQNGRAERKNRHVVEIDLSLLDHSDMPLVSWSFAFQTAVYIINRLPTVVLKSNSLYYMLYHRLPDYFVLRSFGCACFPFLRHFNDHKLLFWSTECLF

Query:  IGYSTNHKAPFLLPLISPSQFPSSPCI---SSSSFDSLPLEVISSPTSSIPLGFASIATPAAHHQPAMSSPHLTPTSALPQSTSPITPPYTSSPPFISSL
        +GY++ HK    L + +   + S   +   SS  F S+P    S      PL  A I  P      + SSP  T +  +P S++  T    S PP +   
Subjt:  IGYSTNHKAPFLLPLISPSQFPSSPCI---SSSSFDSLPLEVISSPTSSIPLGFASIATPAAHHQPAMSSPHLTPTSALPQSTSPITPPYTSSPPFISSL

Query:  LPISPSPLPSPHIVPTNIHPMIIRAKAGIHKPKCSRASSTTSTLPLVEPTSFKVAIKSDEWRDTMDKEYKALIQNNTWILVPPSPAYKLVSYKWVYRIKP
           +PSP PS    P N HPM+ RAK+GIHK K S    TTS     EP ++  A KS+ W   M  EY+AL++N+TW LVPP P+  +V  +W+Y++K 
Subjt:  LPISPSPLPSPHIVPTNIHPMIIRAKAGIHKPKCSRASSTTSTLPLVEPTSFKVAIKSDEWRDTMDKEYKALIQNNTWILVPPSPAYKLVSYKWVYRIKP

Query:  KHDGSVERYKPRLVARGFDQTHGIVYFETFNPIIKLSTIRIVLSLVVRYNWMIKQLDVHNVFLNGDLYEDVFMIQPSGFVDKVKLDHVCKLKKALYGLKQ
          +GSVER+K RLVA+GF QT G+ YF+TF+P++K  TIR++L+L V + W I+QLDV N FLNGDL E+VFM QP GFV      +VCKL KALYGLKQ
Subjt:  KHDGSVERYKPRLVARGFDQTHGIVYFETFNPIIKLSTIRIVLSLVVRYNWMIKQLDVHNVFLNGDLYEDVFMIQPSGFVDKVKLDHVCKLKKALYGLKQ

Query:  SPHEWFMKLSSCLVSWDFKASKLDSSLFYYRKLSIFVVVLVYVDDIIVTGNDSGYIQIFILSLNKLFALKDLGNLSYFLGIE
        +P  WF KL   LV + F++S+ D+SLF +   S  +++LVYVDDI+VTG++   +  FI  L++ FAL+DLG LSYFLGI+
Subjt:  SPHEWFMKLSSCLVSWDFKASKLDSSLFYYRKLSIFVVVLVYVDDIIVTGNDSGYIQIFILSLNKLFALKDLGNLSYFLGIE

A0A438JZY3 Retrovirus-related Pol polyprotein from transposon RE13.0e-11948.21Show/hide
Query:  QQNGRAERKNRHVVEIDLSLLDHSDMPLVSWSFAFQTAVYIINRLPTVVLKSNSLYYMLYHRLPDYFVLRSFGCACFPFLRHFNDHKLLFWSTECLFIGY
        QQNGR ERK+RHVVE+ LSLL H+ +PL  W FAFQ+A+Y+INRLP+ VL  +S Y  LYH LP+Y  LR +GC C+PFLR FN HK  + S +C FIGY
Subjt:  QQNGRAERKNRHVVEIDLSLLDHSDMPLVSWSFAFQTAVYIINRLPTVVLKSNSLYYMLYHRLPDYFVLRSFGCACFPFLRHFNDHKLLFWSTECLFIGY

Query:  STNHKAPFLLPLISPSQFPSSPCI-SSSSFDSLPLEVISSPTSSIPLGFASIATPAAHHQPAMSSPHLTPTSALPQSTSP---ITPPYTSSPPFISSLLP
        ++ HK    L + +     S   I     F       + SP    P           H    ++SP    +S LP S+SP   + P   +S    SS + 
Subjt:  STNHKAPFLLPLISPSQFPSSPCI-SSSSFDSLPLEVISSPTSSIPLGFASIATPAAHHQPAMSSPHLTPTSALPQSTSP---ITPPYTSSPPFISSLLP

Query:  ISPSPLPSPHIVPTNIHPMIIRAKAGIHKPKCSRASSTTSTLPLVEPTSFKVAIKSDEWRDTMDKEYKALIQNNTWILVPPSPAYKLVSYKWVYRIKPKH
          P+  PS   V +  HPM  RAK GI KPK   + + T   PL EP SFK A+K  EW+  M  E++AL+ N TW+LVPP P   ++  +WVY++K K 
Subjt:  ISPSPLPSPHIVPTNIHPMIIRAKAGIHKPKCSRASSTTSTLPLVEPTSFKVAIKSDEWRDTMDKEYKALIQNNTWILVPPSPAYKLVSYKWVYRIKPKH

Query:  DGSVERYKPRLVARGFDQTHGIVYFETFNPIIKLSTIRIVLSLVVRYNWMIKQLDVHNVFLNGDLYEDVFMIQPSGFVDKVKLDHVCKLKKALYGLKQSP
        DG+VERYK RLVA+GF QT G  YFETF+P++K +TIR+VLSL +  NW I+QLDVHN FLNGDL E VFM QP GFVD  K + VCKL KALYGLKQ+P
Subjt:  DGSVERYKPRLVARGFDQTHGIVYFETFNPIIKLSTIRIVLSLVVRYNWMIKQLDVHNVFLNGDLYEDVFMIQPSGFVDKVKLDHVCKLKKALYGLKQSP

Query:  HEWFMKLSSCLVSWDFKASKLDSSLFYYRKLSIFVVVLVYVDDIIVTGNDSGYIQIFILSLNKLFALKDLGNLSYFLGIEVCRDSNSV---TPETVGDIG
        H WF KLSS LV W F  S+ D+S+F Y   S+ +VVLVYVDDIIVTG  S  I+  I SLN  FALKDLG L++FLGIEV    +S+     + + D+ 
Subjt:  HEWFMKLSSCLVSWDFKASKLDSSLFYYRKLSIFVVVLVYVDDIIVTGNDSGYIQIFILSLNKLFALKDLGNLSYFLGIEVCRDSNSV---TPETVGDIG

Query:  ECRGREVSNPDFESWAWGVTDGIRAGIGLRE
        +C G   S       A G+   I  G  L +
Subjt:  ECRGREVSNPDFESWAWGVTDGIRAGIGLRE

A5AYB0 Integrase catalytic domain-containing protein4.5e-10746.76Show/hide
Query:  HQPQQNGRAERKNRHVVEIDLSLLDHSDMPLVSWSFAFQTAVYIINRLPTVVLKSNSLYYMLYHRLPDYFVLRSFGCACFPFLRHFNDHKLLFWSTECLF
        H PQQNGRAERK RH+VE  L+L+  S +P   W++AFQTAVY+IN LP  +L   S    L+H+LP+Y  LR FGC CFP LR +  HKL + ST C+F
Subjt:  HQPQQNGRAERKNRHVVEIDLSLLDHSDMPLVSWSFAFQTAVYIINRLPTVVLKSNSLYYMLYHRLPDYFVLRSFGCACFPFLRHFNDHKLLFWSTECLF

Query:  IGYSTNHKAPFLLPLISPSQFPSSPCISSSSFDSLPLEVISSPTSSIPLGFASIATPAAHHQPAMSSPHLTPTSALPQSTSPITPPYTSSPPFISSLLPI
        +GY+  HK    L + +   + S   I   S  S P +  S P+S  P      +TPA  + P++S+P  +P  + P  TS   PP    P   SS  P 
Subjt:  IGYSTNHKAPFLLPLISPSQFPSSPCISSSSFDSLPLEVISSPTSSIPLGFASIATPAAHHQPAMSSPHLTPTSALPQSTSPITPPYTSSPPFISSLLPI

Query:  SPSPLPSPHIVPTNIHPMIIRAKAGIHKPKCSRASSTTSTLPLVEPTSFKVAIKSDEWRDTMDKEYKALIQNNTWILVPPSPAYKLVSYKWVYRIKPKHD
        +PSP P    +P N HPM+ RAK+GIHK +      TT      EP ++  A K+D W   M+ EY+AL++NNTW LVPP  +  +V  +W+Y++K + D
Subjt:  SPSPLPSPHIVPTNIHPMIIRAKAGIHKPKCSRASSTTSTLPLVEPTSFKVAIKSDEWRDTMDKEYKALIQNNTWILVPPSPAYKLVSYKWVYRIKPKHD

Query:  GSVERYKPRLVARGFDQTHGIVYFETFNPIIKLSTIRIVLSLVVRYNWMIKQLDVHNVFLNGDLYEDVFMIQPSGFVDKVKLDHVCKLKKALYGLKQSPH
        GS++R+K RLVA+GF QT GI YF+TF+P++K  TIR++L+L V + W ++QLDV N FLNGDL E+VFM QP GFV+     +VCKL KALYGLKQ+P 
Subjt:  GSVERYKPRLVARGFDQTHGIVYFETFNPIIKLSTIRIVLSLVVRYNWMIKQLDVHNVFLNGDLYEDVFMIQPSGFVDKVKLDHVCKLKKALYGLKQSPH

Query:  EWFMKLSSCLVSWDFKASKLDSSLFYYRKLSIFVVVLVYVDDIIVTGNDSGYIQIFILSLNKLFALKDLGNLSYFLGIE
         WF KL   L+ + F++S+ D+SLF +   +  +++LVYVDDI+VTG++   +  FI  L   FAL+DLG LSYFLGI+
Subjt:  EWFMKLSSCLVSWDFKASKLDSSLFYYRKLSIFVVVLVYVDDIIVTGNDSGYIQIFILSLNKLFALKDLGNLSYFLGIE

A5BP50 Integrase catalytic domain-containing protein7.7e-10746.76Show/hide
Query:  HQPQQNGRAERKNRHVVEIDLSLLDHSDMPLVSWSFAFQTAVYIINRLPTVVLKSNSLYYMLYHRLPDYFVLRSFGCACFPFLRHFNDHKLLFWSTECLF
        H PQQNGRAERK RH+VE  L+L+  S +P   W++AFQTAVY+IN LP  +L   S    L+H+LP+Y  LR FGC CFP LR +  HKL + ST C+F
Subjt:  HQPQQNGRAERKNRHVVEIDLSLLDHSDMPLVSWSFAFQTAVYIINRLPTVVLKSNSLYYMLYHRLPDYFVLRSFGCACFPFLRHFNDHKLLFWSTECLF

Query:  IGYSTNHKAPFLLPLISPSQFPSSPCISSSSFDSLPLEVISSPTSSIPLGFASIATPAAHHQPAMSSPHLTPTSALPQSTSPITPPYTSSPPFISSLLPI
        +GY+  HK    L + +   + S   I   S  S P +  S P+S  P      +TPA  + P++S+P  +P  + P  TS   PP    P   SS  P 
Subjt:  IGYSTNHKAPFLLPLISPSQFPSSPCISSSSFDSLPLEVISSPTSSIPLGFASIATPAAHHQPAMSSPHLTPTSALPQSTSPITPPYTSSPPFISSLLPI

Query:  SPSPLPSPHIVPTNIHPMIIRAKAGIHKPKCSRASSTTSTLPLVEPTSFKVAIKSDEWRDTMDKEYKALIQNNTWILVPPSPAYKLVSYKWVYRIKPKHD
        +PSP P    +P N HPM+ RAK+GIHK +      TT      EP ++  A K+D W   M+ EY+AL++NNTW LVPP  +  +V  +W+Y++K + D
Subjt:  SPSPLPSPHIVPTNIHPMIIRAKAGIHKPKCSRASSTTSTLPLVEPTSFKVAIKSDEWRDTMDKEYKALIQNNTWILVPPSPAYKLVSYKWVYRIKPKHD

Query:  GSVERYKPRLVARGFDQTHGIVYFETFNPIIKLSTIRIVLSLVVRYNWMIKQLDVHNVFLNGDLYEDVFMIQPSGFVDKVKLDHVCKLKKALYGLKQSPH
        GS++R+K RLVA+GF QT GI YF+TF+P++K  TIR++L+L V + W ++QLDV N FLNGDL E+VFM QP GFV+     +VCKL KALYGLKQ+P 
Subjt:  GSVERYKPRLVARGFDQTHGIVYFETFNPIIKLSTIRIVLSLVVRYNWMIKQLDVHNVFLNGDLYEDVFMIQPSGFVDKVKLDHVCKLKKALYGLKQSPH

Query:  EWFMKLSSCLVSWDFKASKLDSSLFYYRKLSIFVVVLVYVDDIIVTGNDSGYIQIFILSLNKLFALKDLGNLSYFLGIE
         WF KL   L+ + F++S+ D+SLF +   +  +++LVYVDDI+VTG++   +  FI  L   FAL+DLG LSYFLGI+
Subjt:  EWFMKLSSCLVSWDFKASKLDSSLFYYRKLSIFVVVLVYVDDIIVTGNDSGYIQIFILSLNKLFALKDLGNLSYFLGIE

SwissProt top hitse value%identityAlignment
P04146 Copia protein1.1e-3636.67Show/hide
Query:  PTSF-KVAIKSDE--WRDTMDKEYKALIQNNTWILVPPSPAYKLVSYKWVYRIKPKHDGSVERYKPRLVARGFDQTHGIVYFETFNPIIKLSTIRIVLSL
        P SF ++  + D+  W + ++ E  A   NNTW +        +V  +WV+ +K    G+  RYK RLVARGF Q + I Y ETF P+ ++S+ R +LSL
Subjt:  PTSF-KVAIKSDE--WRDTMDKEYKALIQNNTWILVPPSPAYKLVSYKWVYRIKPKHDGSVERYKPRLVARGFDQTHGIVYFETFNPIIKLSTIRIVLSL

Query:  VVRYNWMIKQLDVHNVFLNGDLYEDVFMIQPSGFVDKVKLDHVCKLKKALYGLKQSPHEWFMKLSSCLVSWDFKASKLDSSLFYYRKLSI--FVVVLVYV
        V++YN  + Q+DV   FLNG L E+++M  P G       D+VCKL KA+YGLKQ+   WF      L   +F  S +D  ++   K +I   + VL+YV
Subjt:  VVRYNWMIKQLDVHNVFLNGDLYEDVFMIQPSGFVDKVKLDHVCKLKKALYGLKQSPHEWFMKLSSCLVSWDFKASKLDSSLFYYRKLSI--FVVVLVYV

Query:  DDIIVTGNDSGYIQIFILSLNKLFALKDLGNLSYFLGIEV
        DD+++   D   +  F   L + F + DL  + +F+GI +
Subjt:  DDIIVTGNDSGYIQIFILSLNKLFALKDLGNLSYFLGIEV

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-948.6e-4730.49Show/hide
Query:  PQQNGRAERKNRHVVEIDLSLLDHSDMPLVSWSFAFQTAVYIINRLPTVVLKSNSLYYMLYHRLPDYFVLRSFGCACFPFLRHFNDHKLLFWSTECLFIG
        PQ NG AER NR +VE   S+L  + +P   W  A QTA Y+INR P+V L       +  ++   Y  L+ FGC  F  +      KL   S  C+FIG
Subjt:  PQQNGRAERKNRHVVEIDLSLLDHSDMPLVSWSFAFQTAVYIINRLPTVVLKSNSLYYMLYHRLPDYFVLRSFGCACFPFLRHFNDHKLLFWSTECLFIG

Query:  YSTNHKAPFLLPLISPSQFPSSPCISSSSFDSLPLEVISSPTSSIPLGFASIATPAAHHQPAMSSPHLTPTSALPQSTSPITPPYTSSPPFISSLLPISP
        Y        L   +      S   +   S      ++     + I   F +I        P+ S+    PTSA   +T  ++         I     +  
Subjt:  YSTNHKAPFLLPLISPSQFPSSPCISSSSFDSLPLEVISSPTSSIPLGFASIATPAAHHQPAMSSPHLTPTSALPQSTSPITPPYTSSPPFISSLLPISP

Query:  SPLPSPHIVPTNIHPMIIRAKAGIHKPKCSRASSTTSTLPLV----EPTSFKVAI---KSDEWRDTMDKEYKALIQNNTWILVPPSPAYKLVSYKWVYRI
              H          +R      +P+       ++   L+    EP S K  +   + ++    M +E ++L +N T+ LV      + +  KWV+++
Subjt:  SPLPSPHIVPTNIHPMIIRAKAGIHKPKCSRASSTTSTLPLV----EPTSFKVAI---KSDEWRDTMDKEYKALIQNNTWILVPPSPAYKLVSYKWVYRI

Query:  KPKHDGSVERYKPRLVARGFDQTHGIVYFETFNPIIKLSTIRIVLSLVVRYNWMIKQLDVHNVFLNGDLYEDVFMIQPSGFVDKVKLDHVCKLKKALYGL
        K   D  + RYK RLV +GF+Q  GI + E F+P++K+++IR +LSL    +  ++QLDV   FL+GDL E+++M QP GF    K   VCKL K+LYGL
Subjt:  KPKHDGSVERYKPRLVARGFDQTHGIVYFETFNPIIKLSTIRIVLSLVVRYNWMIKQLDVHNVFLNGDLYEDVFMIQPSGFVDKVKLDHVCKLKKALYGL

Query:  KQSPHEWFMKLSSCLVSWDFKASKLDSSLFYYR-KLSIFVVVLVYVDDIIVTGNDSGYIQIFILSLNKLFALKDLGNLSYFLGIEVCRDSNS
        KQ+P +W+MK  S + S  +  +  D  +++ R   + F+++L+YVDD+++ G D G I      L+K F +KDLG     LG+++ R+  S
Subjt:  KQSPHEWFMKLSSCLVSWDFKASKLDSSLFYYR-KLSIFVVVLVYVDDIIVTGNDSGYIQIFILSLNKLFALKDLGNLSYFLGIEVCRDSNS

P92520 Uncharacterized mitochondrial protein AtMg008202.8e-2139.29Show/hide
Query:  MIIRAKAGIHKPKCSRASSTTSTLPLVEPTSFKVAIKSDEWRDTMDKEYKALIQNNTWILVPPSPAYKLVSYKWVYRIKPKHDGSVERYKPRLVARGFDQ
        M+ R+KAGI+K     + + T+T+   EP S   A+K   W   M +E  AL +N TWILVPP     ++  KWV++ K   DG+++R K RLVA+GF Q
Subjt:  MIIRAKAGIHKPKCSRASSTTSTLPLVEPTSFKVAIKSDEWRDTMDKEYKALIQNNTWILVPPSPAYKLVSYKWVYRIKPKHDGSVERYKPRLVARGFDQ

Query:  THGIVYFETFNPIIKLSTIRIVLSLVVR------YNWMIK
          GI + ET++P+++ +TIR +L++  +       NWM K
Subjt:  THGIVYFETFNPIIKLSTIRIVLSLVVR------YNWMIK

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE11.0e-8434.75Show/hide
Query:  HQPQQNGRAERKNRHVVEIDLSLLDHSDMPLVSWSFAFQTAVYIINRLPTVVLKSNSLYYMLYHRLPDYFVLRSFGCACFPFLRHFNDHKLLFWSTECLF
        H P+ NG +ERK+RH+VE  L+LL H+ +P   W +AF  AVY+INRLPT +L+  S +  L+   P+Y  LR FGCAC+P+LR +N HKL   S +C+F
Subjt:  HQPQQNGRAERKNRHVVEIDLSLLDHSDMPLVSWSFAFQTAVYIINRLPTVVLKSNSLYYMLYHRLPDYFVLRSFGCACFPFLRHFNDHKLLFWSTECLF

Query:  IGYSTNHKA------------------------PF--LLPLISPSQF------------------------------------PSSPCIS----------
        +GYS    A                        PF   L  +SP Q                                     PSSP             
Subjt:  IGYSTNHKA------------------------PF--LLPLISPSQF------------------------------------PSSPCIS----------

Query:  -----SSSFDSLPLEVI---------------------------SSPTSSIPLGFA-SIATPAAHHQPAMSSPHLTPTSALPQSTSPITPPYTSSPPFIS
             SSSF S P                               ++PT+  P   A S++TPA   Q + SSP  T TSA   STSP  P     PP   
Subjt:  -----SSSFDSLPLEVI---------------------------SSPTSSIPLGFA-SIATPAAHHQPAMSSPHLTPTSALPQSTSPITPPYTSSPPFIS

Query:  SLLPISPSPLPSPHIVPTNIHPMIIRAKAGIHKPKCSRASSTTSTLPLVEPTSFKVAIKSDEWRDTMDKEYKALIQNNTWILVPPSPAY-KLVSYKWVYR
           P     + + +  P N H M  RAKAGI KP   + S   S     EP +   A+K + WR+ M  E  A I N+TW LVPP P++  +V  +W++ 
Subjt:  SLLPISPSPLPSPHIVPTNIHPMIIRAKAGIHKPKCSRASSTTSTLPLVEPTSFKVAIKSDEWRDTMDKEYKALIQNNTWILVPPSPAY-KLVSYKWVYR

Query:  IKPKHDGSVERYKPRLVARGFDQTHGIVYFETFNPIIKLSTIRIVLSLVVRYNWMIKQLDVHNVFLNGDLYEDVFMIQPSGFVDKVKLDHVCKLKKALYG
         K   DGS+ RYK RLVA+G++Q  G+ Y ETF+P+IK ++IRIVL + V  +W I+QLDV+N FL G L +DV+M QP GF+DK + ++VCKL+KALYG
Subjt:  IKPKHDGSVERYKPRLVARGFDQTHGIVYFETFNPIIKLSTIRIVLSLVVRYNWMIKQLDVHNVFLNGDLYEDVFMIQPSGFVDKVKLDHVCKLKKALYG

Query:  LKQSPHEWFMKLSSCLVSWDFKASKLDSSLFYYRKLSIFVVVLVYVDDIIVTGNDSGYIQIFILSLNKLFALKDLGNLSYFLGIEVCRDSNSVTPETVGD
        LKQ+P  W+++L + L++  F  S  D+SLF  ++    V +LVYVDDI++TGND   +   + +L++ F++KD   L YFLGIE  R            
Subjt:  LKQSPHEWFMKLSSCLVSWDFKASKLDSSLFYYRKLSIFVVVLVYVDDIIVTGNDSGYIQIFILSLNKLFALKDLGNLSYFLGIEVCRDSNSVTPETVGD

Query:  IGECRGREVSNPDFESWAWGVTDGIRAGIGLRECRGREVPNPDSESWAWGVTNSLHLSQHTYFQDLLQRADMLSCKIMATPM
                                                          V   LHLSQ  Y  DLL R +M++ K + TPM
Subjt:  IGECRGREVSNPDFESWAWGVTDGIRAGIGLRECRGREVPNPDSESWAWGVTNSLHLSQHTYFQDLLQRADMLSCKIMATPM

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE25.3e-8935.06Show/hide
Query:  HQPQQNGRAERKNRHVVEIDLSLLDHSDMPLVSWSFAFQTAVYIINRLPTVVLKSNSLYYMLYHRLPDYFVLRSFGCACFPFLRHFNDHKLLFWSTECLF
        H P+ NG +ERK+RH+VE+ L+LL H+ +P   W +AF  AVY+INRLPT +L+  S +  L+ + P+Y  L+ FGCAC+P+LR +N HKL   S +C F
Subjt:  HQPQQNGRAERKNRHVVEIDLSLLDHSDMPLVSWSFAFQTAVYIINRLPTVVLKSNSLYYMLYHRLPDYFVLRSFGCACFPFLRHFNDHKLLFWSTECLF

Query:  IGYSTNHKA------------------------PF----------------------------LLPLISPS------------QFPSSP---CISSSSFD
        +GYS    A                        PF                              PL+ P+            + PSSP   C +  S  
Subjt:  IGYSTNHKA------------------------PF----------------------------LLPLISPS------------QFPSSP---CISSSSFD

Query:  SLPLEVISSPTSSIPL-----GFASIATPAAHHQPAMSSPHL-----------TPTSALPQSTSPITPPY----------TSSPPFISSLLPISPSPLPS
        +LP   ISSP+SS P      G    A P        +SP L           +P    P   SPI+ P+           +SP   S+  P  P  LP+
Subjt:  SLPLEVISSPTSSIPL-----GFASIATPAAHHQPAMSSPHL-----------TPTSALPQSTSPITPPY----------TSSPPFISSLLPISPSPLPS

Query:  PHIV------PTNIHPMIIRAKAGIHKPKCSRASSTTSTLPLVEPTSFKVAIKSDEWRDTMDKEYKALIQNNTWILV-PPSPAYKLVSYKWVYRIKPKHD
        P I+      P N H M  RAK GI KP   + S  TS     EP +   A+K D WR  M  E  A I N+TW LV PP P+  +V  +W++  K   D
Subjt:  PHIV------PTNIHPMIIRAKAGIHKPKCSRASSTTSTLPLVEPTSFKVAIKSDEWRDTMDKEYKALIQNNTWILV-PPSPAYKLVSYKWVYRIKPKHD

Query:  GSVERYKPRLVARGFDQTHGIVYFETFNPIIKLSTIRIVLSLVVRYNWMIKQLDVHNVFLNGDLYEDVFMIQPSGFVDKVKLDHVCKLKKALYGLKQSPH
        GS+ RYK RLVA+G++Q  G+ Y ETF+P+IK ++IRIVL + V  +W I+QLDV+N FL G L ++V+M QP GFVDK + D+VC+L+KA+YGLKQ+P 
Subjt:  GSVERYKPRLVARGFDQTHGIVYFETFNPIIKLSTIRIVLSLVVRYNWMIKQLDVHNVFLNGDLYEDVFMIQPSGFVDKVKLDHVCKLKKALYGLKQSPH

Query:  EWFMKLSSCLVSWDFKASKLDSSLFYYRKLSIFVVVLVYVDDIIVTGNDSGYIQIFILSLNKLFALKDLGNLSYFLGIEVCRDSNSVTPETVGDIGECRG
         W+++L + L++  F  S  D+SLF  ++    + +LVYVDDI++TGND+  ++  + +L++ F++K+  +L YFLGIE  R                  
Subjt:  EWFMKLSSCLVSWDFKASKLDSSLFYYRKLSIFVVVLVYVDDIIVTGNDSGYIQIFILSLNKLFALKDLGNLSYFLGIEVCRDSNSVTPETVGDIGECRG

Query:  REVSNPDFESWAWGVTDGIRAGIGLRECRGREVPNPDSESWAWGVTNSLHLSQHTYFQDLLQRADMLSCKIMATPM
                                                    V   LHLSQ  Y  DLL R +ML+ K +ATPM
Subjt:  REVSNPDFESWAWGVTDGIRAGIGLRECRGREVPNPDSESWAWGVTNSLHLSQHTYFQDLLQRADMLSCKIMATPM

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 81.7e-5040.08Show/hide
Query:  EPTSFKVAIKSDEWRDTMDKEYKALIQNNTWILVPPSPAYKLVSYKWVYRIKPKHDGSVERYKPRLVARGFDQTHGIVYFETFNPIIKLSTIRIVLSLVV
        EP+++  A +   W   MD E  A+   +TW +    P  K +  KWVY+IK   DG++ERYK RLVA+G+ Q  GI + ETF+P+ KL++++++L++  
Subjt:  EPTSFKVAIKSDEWRDTMDKEYKALIQNNTWILVPPSPAYKLVSYKWVYRIKPKHDGSVERYKPRLVARGFDQTHGIVYFETFNPIIKLSTIRIVLSLVV

Query:  RYNWMIKQLDVHNVFLNGDLYEDVFMIQPSGFV----DKVKLDHVCKLKKALYGLKQSPHEWFMKLSSCLVSWDFKASKLDSSLFYYRKLSIFVVVLVYV
         YN+ + QLD+ N FLNGDL E+++M  P G+     D +  + VC LKK++YGLKQ+  +WF+K S  L+ + F  S  D + F     ++F+ VLVYV
Subjt:  RYNWMIKQLDVHNVFLNGDLYEDVFMIQPSGFV----DKVKLDHVCKLKKALYGLKQSPHEWFMKLSSCLVSWDFKASKLDSSLFYYRKLSIFVVVLVYV

Query:  DDIIVTGNDSGYIQIFILSLNKLFALKDLGNLSYFLGIEVCRDSNSV
        DDII+  N+   +      L   F L+DLG L YFLG+E+ R +  +
Subjt:  DDIIVTGNDSGYIQIFILSLNKLFALKDLGNLSYFLGIEVCRDSNSV

ATMG00810.1 DNA/RNA polymerases superfamily protein3.8e-0544.44Show/hide
Query:  VLVYVDDIIVTGNDSGYIQIFILSLNKLFALKDLGNLSYFLGIEV
        +L+YVDDI++TG+ +  + + I  L+  F++KDLG + YFLGI++
Subjt:  VLVYVDDIIVTGNDSGYIQIFILSLNKLFALKDLGNLSYFLGIEV

ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase)2.0e-2239.29Show/hide
Query:  MIIRAKAGIHKPKCSRASSTTSTLPLVEPTSFKVAIKSDEWRDTMDKEYKALIQNNTWILVPPSPAYKLVSYKWVYRIKPKHDGSVERYKPRLVARGFDQ
        M+ R+KAGI+K     + + T+T+   EP S   A+K   W   M +E  AL +N TWILVPP     ++  KWV++ K   DG+++R K RLVA+GF Q
Subjt:  MIIRAKAGIHKPKCSRASSTTSTLPLVEPTSFKVAIKSDEWRDTMDKEYKALIQNNTWILVPPSPAYKLVSYKWVYRIKPKHDGSVERYKPRLVARGFDQ

Query:  THGIVYFETFNPIIKLSTIRIVLSLVVR------YNWMIK
          GI + ET++P+++ +TIR +L++  +       NWM K
Subjt:  THGIVYFETFNPIIKLSTIRIVLSLVVR------YNWMIK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAATCAAGAAAGGCGTTCTTGATATTTCAGAGACGACAACAACGGAAATTCCAATCCCATCAGCCTCAACAAAATGGGCGTGCTGAAAGAAAAAATAGACATGTTGT
AGAGATTGATCTTTCATTGCTTGACCATTCTGATATGCCCTTGGTTTCTTGGAGCTTTGCTTTTCAAACTGCAGTTTATATCATTAATAGATTGCCTACTGTTGTTTTGA
AATCTAATTCCCTTTATTATATGTTGTATCATCGTCTTCCTGATTATTTTGTTCTTCGATCCTTTGGTTGTGCTTGTTTCCCATTCTTAAGACATTTCAATGATCATAAG
TTATTGTTTTGGTCGACTGAGTGTCTTTTTATTGGCTATAGCACAAATCACAAGGCCCCATTTTTGCTTCCTCTTATTTCACCTTCTCAGTTTCCTTCCTCCCCTTGTAT
CTCTTCTTCTTCCTTTGACTCTTTACCTTTAGAAGTCATCTCTTCTCCTACTTCATCCATTCCTCTAGGATTTGCTTCCATTGCCACTCCAGCAGCTCATCACCAGCCTG
CCATGTCTTCTCCACATTTAACCCCCACCTCTGCTCTTCCTCAATCAACTAGCCCAATAACACCACCATATACTTCATCACCACCTTTCATTTCATCCCTTTTACCTATT
TCTCCTTCACCCCTCCCTTCTCCTCACATTGTCCCAACCAATATCCATCCAATGATTATAAGAGCCAAAGCTGGAATTCATAAACCAAAATGTTCGCGTGCATCTTCCAC
CACTTCCACTCTACCTTTAGTTGAACCAACCAGTTTTAAAGTGGCAATTAAGAGTGATGAATGGCGAGATACTATGGATAAAGAGTATAAGGCCTTAATTCAGAACAACA
CATGGATTCTTGTTCCTCCTTCTCCTGCATATAAGCTTGTAAGCTACAAATGGGTTTACAGGATAAAGCCCAAACATGATGGTTCGGTTGAAAGGTACAAGCCTCGATTG
GTGGCTCGTGGTTTTGATCAGACACATGGAATTGTTTATTTTGAAACCTTTAACCCAATCATTAAGCTTTCAACCATTAGGATTGTTTTATCTCTTGTTGTTCGGTACAA
TTGGATGATTAAACAACTTGATGTTCATAATGTTTTCCTTAATGGTGACCTTTATGAAGATGTGTTTATGATTCAACCTTCTGGTTTTGTGGATAAGGTTAAGCTGGATC
ATGTGTGTAAACTGAAGAAGGCTTTATACGGTTTAAAACAAAGCCCACATGAATGGTTCATGAAGCTTAGTTCTTGTCTCGTAAGTTGGGATTTTAAGGCATCTAAATTA
GACTCTTCTCTGTTTTATTACCGCAAACTGTCCATTTTTGTTGTTGTATTAGTCTATGTTGATGACATTATTGTGACTGGAAATGATTCAGGCTACATTCAAATTTTTAT
TTTGTCCTTGAACAAGTTATTTGCACTTAAGGATTTGGGTAATTTGTCTTATTTCCTTGGTATTGAAGTCTGTCGTGATTCCAATTCTGTGACGCCCGAGACCGTAGGGG
ATATAGGGGAATGCCGGGGCCGTGAGGTGTCGAATCCAGATTTTGAATCCTGGGCTTGGGGCGTTACAGATGGTATCAGAGCGGGCATCGGTTTAAGGGAATGTCGGGGC
CGTGAGGTGCCGAATCCGGATTCTGAATCCTGGGCCTGGGGCGTTACAAATTCTCTGCATCTTTCTCAACACACGTACTTTCAAGATTTACTTCAACGTGCTGATATGCT
CTCTTGTAAGATTATGGCTACACCAATGGTTGTGTTGGTTCTTGATAATATCATTCTGCCTAAACTCCAGACTGTTGTGTTGGAATCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAATCAAGAAAGGCGTTCTTGATATTTCAGAGACGACAACAACGGAAATTCCAATCCCATCAGCCTCAACAAAATGGGCGTGCTGAAAGAAAAAATAGACATGTTGT
AGAGATTGATCTTTCATTGCTTGACCATTCTGATATGCCCTTGGTTTCTTGGAGCTTTGCTTTTCAAACTGCAGTTTATATCATTAATAGATTGCCTACTGTTGTTTTGA
AATCTAATTCCCTTTATTATATGTTGTATCATCGTCTTCCTGATTATTTTGTTCTTCGATCCTTTGGTTGTGCTTGTTTCCCATTCTTAAGACATTTCAATGATCATAAG
TTATTGTTTTGGTCGACTGAGTGTCTTTTTATTGGCTATAGCACAAATCACAAGGCCCCATTTTTGCTTCCTCTTATTTCACCTTCTCAGTTTCCTTCCTCCCCTTGTAT
CTCTTCTTCTTCCTTTGACTCTTTACCTTTAGAAGTCATCTCTTCTCCTACTTCATCCATTCCTCTAGGATTTGCTTCCATTGCCACTCCAGCAGCTCATCACCAGCCTG
CCATGTCTTCTCCACATTTAACCCCCACCTCTGCTCTTCCTCAATCAACTAGCCCAATAACACCACCATATACTTCATCACCACCTTTCATTTCATCCCTTTTACCTATT
TCTCCTTCACCCCTCCCTTCTCCTCACATTGTCCCAACCAATATCCATCCAATGATTATAAGAGCCAAAGCTGGAATTCATAAACCAAAATGTTCGCGTGCATCTTCCAC
CACTTCCACTCTACCTTTAGTTGAACCAACCAGTTTTAAAGTGGCAATTAAGAGTGATGAATGGCGAGATACTATGGATAAAGAGTATAAGGCCTTAATTCAGAACAACA
CATGGATTCTTGTTCCTCCTTCTCCTGCATATAAGCTTGTAAGCTACAAATGGGTTTACAGGATAAAGCCCAAACATGATGGTTCGGTTGAAAGGTACAAGCCTCGATTG
GTGGCTCGTGGTTTTGATCAGACACATGGAATTGTTTATTTTGAAACCTTTAACCCAATCATTAAGCTTTCAACCATTAGGATTGTTTTATCTCTTGTTGTTCGGTACAA
TTGGATGATTAAACAACTTGATGTTCATAATGTTTTCCTTAATGGTGACCTTTATGAAGATGTGTTTATGATTCAACCTTCTGGTTTTGTGGATAAGGTTAAGCTGGATC
ATGTGTGTAAACTGAAGAAGGCTTTATACGGTTTAAAACAAAGCCCACATGAATGGTTCATGAAGCTTAGTTCTTGTCTCGTAAGTTGGGATTTTAAGGCATCTAAATTA
GACTCTTCTCTGTTTTATTACCGCAAACTGTCCATTTTTGTTGTTGTATTAGTCTATGTTGATGACATTATTGTGACTGGAAATGATTCAGGCTACATTCAAATTTTTAT
TTTGTCCTTGAACAAGTTATTTGCACTTAAGGATTTGGGTAATTTGTCTTATTTCCTTGGTATTGAAGTCTGTCGTGATTCCAATTCTGTGACGCCCGAGACCGTAGGGG
ATATAGGGGAATGCCGGGGCCGTGAGGTGTCGAATCCAGATTTTGAATCCTGGGCTTGGGGCGTTACAGATGGTATCAGAGCGGGCATCGGTTTAAGGGAATGTCGGGGC
CGTGAGGTGCCGAATCCGGATTCTGAATCCTGGGCCTGGGGCGTTACAAATTCTCTGCATCTTTCTCAACACACGTACTTTCAAGATTTACTTCAACGTGCTGATATGCT
CTCTTGTAAGATTATGGCTACACCAATGGTTGTGTTGGTTCTTGATAATATCATTCTGCCTAAACTCCAGACTGTTGTGTTGGAATCTTGA
Protein sequenceShow/hide protein sequence
MKSRKAFLIFQRRQQRKFQSHQPQQNGRAERKNRHVVEIDLSLLDHSDMPLVSWSFAFQTAVYIINRLPTVVLKSNSLYYMLYHRLPDYFVLRSFGCACFPFLRHFNDHK
LLFWSTECLFIGYSTNHKAPFLLPLISPSQFPSSPCISSSSFDSLPLEVISSPTSSIPLGFASIATPAAHHQPAMSSPHLTPTSALPQSTSPITPPYTSSPPFISSLLPI
SPSPLPSPHIVPTNIHPMIIRAKAGIHKPKCSRASSTTSTLPLVEPTSFKVAIKSDEWRDTMDKEYKALIQNNTWILVPPSPAYKLVSYKWVYRIKPKHDGSVERYKPRL
VARGFDQTHGIVYFETFNPIIKLSTIRIVLSLVVRYNWMIKQLDVHNVFLNGDLYEDVFMIQPSGFVDKVKLDHVCKLKKALYGLKQSPHEWFMKLSSCLVSWDFKASKL
DSSLFYYRKLSIFVVVLVYVDDIIVTGNDSGYIQIFILSLNKLFALKDLGNLSYFLGIEVCRDSNSVTPETVGDIGECRGREVSNPDFESWAWGVTDGIRAGIGLRECRG
REVPNPDSESWAWGVTNSLHLSQHTYFQDLLQRADMLSCKIMATPMVVLVLDNIILPKLQTVVLES