; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0018573 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0018573
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionPMD domain-containing protein
Genome locationchr5:29811573..29813095
RNA-Seq ExpressionLag0018573
SyntenyLag0018573
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036933.1 uncharacterized protein E6C27_scaffold86G00060 [Cucumis melo var. makuwa]4.9e-5153.72Show/hide
Query:  MYIPINRFTIQALLGFWAPAYRCFAFQDSDLVPTIEEHHTMLDVEGKDRKMIYCFNPQLTANRALSKFL-AIHLREVHKNVKVKGVEESISVDYLIELAR
        MYIP+N F ++A++ F  PAY CF F   DL+PTIEE+  ML +  K+R+++Y FNP+ T  R LSKFL  +H  E+ K +K KG EE++  DYLI++ +
Subjt:  MYIPINRFTIQALLGFWAPAYRCFAFQDSDLVPTIEEHHTMLDVEGKDRKMIYCFNPQLTANRALSKFL-AIHLREVHKNVKVKGVEESISVDYLIELAR

Query:  KHINEEKGLVLLALCIYGMVLYPRVKGYVDDNVLKLFFNIEQGVNLAIPLLVETVRVLNYCKSNKG---------GKLRCCVPLLYIW
         +I+E+KGL LLALCIYG V++P+ +GYVD  V+KLFF +E+GVN  IP+L ET R LNYC+ NKG         GKL CCVPLLYIW
Subjt:  KHINEEKGLVLLALCIYGMVLYPRVKGYVDDNVLKLFFNIEQGVNLAIPLLVETVRVLNYCKSNKG---------GKLRCCVPLLYIW

KAA0036941.1 girdin-like [Cucumis melo var. makuwa]2.6e-5254.75Show/hide
Query:  MYIPINRFTIQALLGFWAPAYRCFAFQDSDLVPTIEEHHTMLDVEGKDRKMIYCFNPQLTANRALSKFL-AIHLREVHKNVKVKGVEESISVDYLIELAR
        MYIP+N F ++A++ F  PAY CF F   +L+PTIEE+  ML +  K+R+++Y FNP+ T  R LSKFL  +H  E+ K +KVKG EE++  DYLI++ +
Subjt:  MYIPINRFTIQALLGFWAPAYRCFAFQDSDLVPTIEEHHTMLDVEGKDRKMIYCFNPQLTANRALSKFL-AIHLREVHKNVKVKGVEESISVDYLIELAR

Query:  KHINEEKGLVLLALCIYGMVLYPRVKGYVDDNVLKLFFNIEQGVNLAIPLLVETVRVLNYCKSNKGGKLRCCVPLLYIW
         +I+E+KGL LLALCIYG V++P+ +GYVD  V+KLFF +E+GVN  IP+L ET R LNYC++   GKL CCVPLLYIW
Subjt:  KHINEEKGLVLLALCIYGMVLYPRVKGYVDDNVLKLFFNIEQGVNLAIPLLVETVRVLNYCKSNKGGKLRCCVPLLYIW

KAA0036949.1 girdin-like [Cucumis melo var. makuwa]4.9e-5153.72Show/hide
Query:  MYIPINRFTIQALLGFWAPAYRCFAFQDSDLVPTIEEHHTMLDVEGKDRKMIYCFNPQLTANRALSKFL-AIHLREVHKNVKVKGVEESISVDYLIELAR
        MYIP+N F ++A++ F  PAY CF F   DL+PTIEE+  ML +  K+R+++Y FNP+ T  R LSKFL  +H  E+ K +K KG EE++  DYLI++ +
Subjt:  MYIPINRFTIQALLGFWAPAYRCFAFQDSDLVPTIEEHHTMLDVEGKDRKMIYCFNPQLTANRALSKFL-AIHLREVHKNVKVKGVEESISVDYLIELAR

Query:  KHINEEKGLVLLALCIYGMVLYPRVKGYVDDNVLKLFFNIEQGVNLAIPLLVETVRVLNYCKSNKG---------GKLRCCVPLLYIW
         +I+E+KGL LLALCIYG V++P+ +GYVD  V+KLFF +E+GVN  IP+L ET R LNYC+ NKG         GKL CCVPLLYIW
Subjt:  KHINEEKGLVLLALCIYGMVLYPRVKGYVDDNVLKLFFNIEQGVNLAIPLLVETVRVLNYCKSNKG---------GKLRCCVPLLYIW

KAA0056623.1 girdin-like [Cucumis melo var. makuwa]4.3e-4750.56Show/hide
Query:  MYIPINRFTIQALLGFWAPAYRCFAFQDSDLVPTIEEHHTMLDVEGKDRKMIYCFNPQLTANRALSKFLAIHLREVHKNVKVKGVEESISVDYLIELARK
        MYI +N F ++A++ FW PAY CF F   DL+PTIEE+  ML +  K+R+++Y FNP+ T              E+ K +KVKG EE++  DYLI++ + 
Subjt:  MYIPINRFTIQALLGFWAPAYRCFAFQDSDLVPTIEEHHTMLDVEGKDRKMIYCFNPQLTANRALSKFLAIHLREVHKNVKVKGVEESISVDYLIELARK

Query:  HINEEKGLVLLALCIYGMVLYPRVKGYVDDNVLKLFFNIEQGVNLAIPLLVETVRVLNYCKSNKGGKLRCCVPLLYIW
        +I+E+KGL LLALCIYG V++P+ +GYVD  V+KLFF +E+GVN  IP+L +T R LNYC++   GK  CCVPLLYIW
Subjt:  HINEEKGLVLLALCIYGMVLYPRVKGYVDDNVLKLFFNIEQGVNLAIPLLVETVRVLNYCKSNKGGKLRCCVPLLYIW

KAA0060423.1 uncharacterized protein E6C27_scaffold22G002420 [Cucumis melo var. makuwa]6.2e-5454.19Show/hide
Query:  MYIPINRFTIQALLGFWAPAYRCFAFQDSDLVPTIEEHHTMLDVEGKDRKMIYCFNPQLTANRALSKFL-AIHLREVHKNVKVKGVEESISVDYLIELAR
        MYIP+N F ++A++ FW PAY CF F   DL+PTIEE+  ML +  K+R+++Y FNP+ T  R LSKFL  +H  E+ K +K+KG EE++  DYLI++ +
Subjt:  MYIPINRFTIQALLGFWAPAYRCFAFQDSDLVPTIEEHHTMLDVEGKDRKMIYCFNPQLTANRALSKFL-AIHLREVHKNVKVKGVEESISVDYLIELAR

Query:  KHINEEKGLVLLALCIYGMVLYPRVKGYVDDNVLKLFFNIEQGVNLAIPLLVETVRVLNYCKSNKGGKLRCCVPLLYIW
         +++E+KGL LLALCIYG V++P+ +GYVD  V+KLFF +E+GVN  IP+L ET R LNYC++   GKL CC+PLLYIW
Subjt:  KHINEEKGLVLLALCIYGMVLYPRVKGYVDDNVLKLFFNIEQGVNLAIPLLVETVRVLNYCKSNKGGKLRCCVPLLYIW

TrEMBL top hitse value%identityAlignment
A0A5A7T1W2 Retrotrans_gag domain-containing protein2.4e-5153.72Show/hide
Query:  MYIPINRFTIQALLGFWAPAYRCFAFQDSDLVPTIEEHHTMLDVEGKDRKMIYCFNPQLTANRALSKFL-AIHLREVHKNVKVKGVEESISVDYLIELAR
        MYIP+N F ++A++ F  PAY CF F   DL+PTIEE+  ML +  K+R+++Y FNP+ T  R LSKFL  +H  E+ K +K KG EE++  DYLI++ +
Subjt:  MYIPINRFTIQALLGFWAPAYRCFAFQDSDLVPTIEEHHTMLDVEGKDRKMIYCFNPQLTANRALSKFL-AIHLREVHKNVKVKGVEESISVDYLIELAR

Query:  KHINEEKGLVLLALCIYGMVLYPRVKGYVDDNVLKLFFNIEQGVNLAIPLLVETVRVLNYCKSNKG---------GKLRCCVPLLYIW
         +I+E+KGL LLALCIYG V++P+ +GYVD  V+KLFF +E+GVN  IP+L ET R LNYC+ NKG         GKL CCVPLLYIW
Subjt:  KHINEEKGLVLLALCIYGMVLYPRVKGYVDDNVLKLFFNIEQGVNLAIPLLVETVRVLNYCKSNKG---------GKLRCCVPLLYIW

A0A5A7T5S7 Girdin-like1.3e-5254.75Show/hide
Query:  MYIPINRFTIQALLGFWAPAYRCFAFQDSDLVPTIEEHHTMLDVEGKDRKMIYCFNPQLTANRALSKFL-AIHLREVHKNVKVKGVEESISVDYLIELAR
        MYIP+N F ++A++ F  PAY CF F   +L+PTIEE+  ML +  K+R+++Y FNP+ T  R LSKFL  +H  E+ K +KVKG EE++  DYLI++ +
Subjt:  MYIPINRFTIQALLGFWAPAYRCFAFQDSDLVPTIEEHHTMLDVEGKDRKMIYCFNPQLTANRALSKFL-AIHLREVHKNVKVKGVEESISVDYLIELAR

Query:  KHINEEKGLVLLALCIYGMVLYPRVKGYVDDNVLKLFFNIEQGVNLAIPLLVETVRVLNYCKSNKGGKLRCCVPLLYIW
         +I+E+KGL LLALCIYG V++P+ +GYVD  V+KLFF +E+GVN  IP+L ET R LNYC++   GKL CCVPLLYIW
Subjt:  KHINEEKGLVLLALCIYGMVLYPRVKGYVDDNVLKLFFNIEQGVNLAIPLLVETVRVLNYCKSNKGGKLRCCVPLLYIW

A0A5A7T6E2 Girdin-like2.4e-5153.72Show/hide
Query:  MYIPINRFTIQALLGFWAPAYRCFAFQDSDLVPTIEEHHTMLDVEGKDRKMIYCFNPQLTANRALSKFL-AIHLREVHKNVKVKGVEESISVDYLIELAR
        MYIP+N F ++A++ F  PAY CF F   DL+PTIEE+  ML +  K+R+++Y FNP+ T  R LSKFL  +H  E+ K +K KG EE++  DYLI++ +
Subjt:  MYIPINRFTIQALLGFWAPAYRCFAFQDSDLVPTIEEHHTMLDVEGKDRKMIYCFNPQLTANRALSKFL-AIHLREVHKNVKVKGVEESISVDYLIELAR

Query:  KHINEEKGLVLLALCIYGMVLYPRVKGYVDDNVLKLFFNIEQGVNLAIPLLVETVRVLNYCKSNKG---------GKLRCCVPLLYIW
         +I+E+KGL LLALCIYG V++P+ +GYVD  V+KLFF +E+GVN  IP+L ET R LNYC+ NKG         GKL CCVPLLYIW
Subjt:  KHINEEKGLVLLALCIYGMVLYPRVKGYVDDNVLKLFFNIEQGVNLAIPLLVETVRVLNYCKSNKG---------GKLRCCVPLLYIW

A0A5A7UL51 Girdin-like2.1e-4750.56Show/hide
Query:  MYIPINRFTIQALLGFWAPAYRCFAFQDSDLVPTIEEHHTMLDVEGKDRKMIYCFNPQLTANRALSKFLAIHLREVHKNVKVKGVEESISVDYLIELARK
        MYI +N F ++A++ FW PAY CF F   DL+PTIEE+  ML +  K+R+++Y FNP+ T              E+ K +KVKG EE++  DYLI++ + 
Subjt:  MYIPINRFTIQALLGFWAPAYRCFAFQDSDLVPTIEEHHTMLDVEGKDRKMIYCFNPQLTANRALSKFLAIHLREVHKNVKVKGVEESISVDYLIELARK

Query:  HINEEKGLVLLALCIYGMVLYPRVKGYVDDNVLKLFFNIEQGVNLAIPLLVETVRVLNYCKSNKGGKLRCCVPLLYIW
        +I+E+KGL LLALCIYG V++P+ +GYVD  V+KLFF +E+GVN  IP+L +T R LNYC++   GK  CCVPLLYIW
Subjt:  HINEEKGLVLLALCIYGMVLYPRVKGYVDDNVLKLFFNIEQGVNLAIPLLVETVRVLNYCKSNKGGKLRCCVPLLYIW

A0A5A7UWQ6 Uncharacterized protein3.0e-5454.19Show/hide
Query:  MYIPINRFTIQALLGFWAPAYRCFAFQDSDLVPTIEEHHTMLDVEGKDRKMIYCFNPQLTANRALSKFL-AIHLREVHKNVKVKGVEESISVDYLIELAR
        MYIP+N F ++A++ FW PAY CF F   DL+PTIEE+  ML +  K+R+++Y FNP+ T  R LSKFL  +H  E+ K +K+KG EE++  DYLI++ +
Subjt:  MYIPINRFTIQALLGFWAPAYRCFAFQDSDLVPTIEEHHTMLDVEGKDRKMIYCFNPQLTANRALSKFL-AIHLREVHKNVKVKGVEESISVDYLIELAR

Query:  KHINEEKGLVLLALCIYGMVLYPRVKGYVDDNVLKLFFNIEQGVNLAIPLLVETVRVLNYCKSNKGGKLRCCVPLLYIW
         +++E+KGL LLALCIYG V++P+ +GYVD  V+KLFF +E+GVN  IP+L ET R LNYC++   GKL CC+PLLYIW
Subjt:  KHINEEKGLVLLALCIYGMVLYPRVKGYVDDNVLKLFFNIEQGVNLAIPLLVETVRVLNYCKSNKGGKLRCCVPLLYIW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATATCCCGATTAATCGGTTCACCATCCAGGCTTTATTAGGATTTTGGGCCCCAGCCTACAGATGTTTTGCATTTCAAGATTCTGACTTGGTACCAACCATCGAGGA
GCACCACACAATGCTGGATGTTGAAGGGAAAGACAGAAAGATGATCTATTGTTTCAACCCACAACTAACTGCAAATAGAGCTTTATCCAAATTTCTAGCTATACACCTGA
GGGAAGTGCATAAAAATGTGAAAGTGAAGGGGGTTGAAGAGTCTATATCTGTAGATTATCTAATAGAACTCGCTCGCAAACACATAAATGAAGAAAAGGGCCTGGTTTTG
TTAGCTCTGTGCATCTATGGGATGGTCTTGTATCCCAGAGTAAAAGGATATGTGGATGACAATGTCTTGAAGCTCTTCTTCAACATTGAGCAAGGGGTGAATCTAGCCAT
ACCTCTTCTGGTAGAGACAGTTCGGGTGCTTAATTATTGTAAGTCCAACAAAGGCGGGAAGTTGAGATGTTGTGTTCCCTTATTGTATATTTGGTCGTTGTCGCCTAATC
TTCCTTGCGCTGCCGTCGATCTCATTCCAGCCACCAGCCCCGTCTTCGCTTGCTTCTTCTTCTTCACCAATCCCGCCTTCTCGTGTTGCCGCCTCCATCTCTTTCCCCCG
TCTCTCTTTTCCGTCGGTAGCAATGAAACTCGCGTCGCCACCGATCCCTCCTCGCGACGCCGCACTGCCCCTTCCCCTATTTTTCTCCACGCCGCCGTCCTCATCTCGTG
CACGTCATCGCCTGCCCTCACCGCTGCCTCCGCGTGCCGCCGCCGGTATCGTCTCCCTCTCCTCGATTCTTCTTTCTCCGGCAACCTCAGATCCACACCTTGCCGTCATC
TCTCCATCCGAGAATTGACACCCACGCCAGAAGTCCCACGCGAGCAGCACGTGTATAGCAAGATCTGCAATTTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGTATATCCCGATTAATCGGTTCACCATCCAGGCTTTATTAGGATTTTGGGCCCCAGCCTACAGATGTTTTGCATTTCAAGATTCTGACTTGGTACCAACCATCGAGGA
GCACCACACAATGCTGGATGTTGAAGGGAAAGACAGAAAGATGATCTATTGTTTCAACCCACAACTAACTGCAAATAGAGCTTTATCCAAATTTCTAGCTATACACCTGA
GGGAAGTGCATAAAAATGTGAAAGTGAAGGGGGTTGAAGAGTCTATATCTGTAGATTATCTAATAGAACTCGCTCGCAAACACATAAATGAAGAAAAGGGCCTGGTTTTG
TTAGCTCTGTGCATCTATGGGATGGTCTTGTATCCCAGAGTAAAAGGATATGTGGATGACAATGTCTTGAAGCTCTTCTTCAACATTGAGCAAGGGGTGAATCTAGCCAT
ACCTCTTCTGGTAGAGACAGTTCGGGTGCTTAATTATTGTAAGTCCAACAAAGGCGGGAAGTTGAGATGTTGTGTTCCCTTATTGTATATTTGGTCGTTGTCGCCTAATC
TTCCTTGCGCTGCCGTCGATCTCATTCCAGCCACCAGCCCCGTCTTCGCTTGCTTCTTCTTCTTCACCAATCCCGCCTTCTCGTGTTGCCGCCTCCATCTCTTTCCCCCG
TCTCTCTTTTCCGTCGGTAGCAATGAAACTCGCGTCGCCACCGATCCCTCCTCGCGACGCCGCACTGCCCCTTCCCCTATTTTTCTCCACGCCGCCGTCCTCATCTCGTG
CACGTCATCGCCTGCCCTCACCGCTGCCTCCGCGTGCCGCCGCCGGTATCGTCTCCCTCTCCTCGATTCTTCTTTCTCCGGCAACCTCAGATCCACACCTTGCCGTCATC
TCTCCATCCGAGAATTGACACCCACGCCAGAAGTCCCACGCGAGCAGCACGTGTATAGCAAGATCTGCAATTTCTAG
Protein sequenceShow/hide protein sequence
MYIPINRFTIQALLGFWAPAYRCFAFQDSDLVPTIEEHHTMLDVEGKDRKMIYCFNPQLTANRALSKFLAIHLREVHKNVKVKGVEESISVDYLIELARKHINEEKGLVL
LALCIYGMVLYPRVKGYVDDNVLKLFFNIEQGVNLAIPLLVETVRVLNYCKSNKGGKLRCCVPLLYIWSLSPNLPCAAVDLIPATSPVFACFFFFTNPAFSCCRLHLFPP
SLFSVGSNETRVATDPSSRRRTAPSPIFLHAAVLISCTSSPALTAASACRRRYRLPLLDSSFSGNLRSTPCRHLSIRELTPTPEVPREQHVYSKICNF