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Lag0018575 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0018575
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonuclease H
Genome locationchr5:29879376..29880031
RNA-Seq ExpressionLag0018575
SyntenyLag0018575
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022142767.1 uncharacterized protein LOC111012805 [Momordica charantia]3.1e-2336.36Show/hide
Query:  QQSGESLRDYITRFNKEALQVEGYSEGASLVAITTGLENES-------------------------------RPRLEEGQKSADRRRRPSDPSRG-----
        +++ ESL DY+TRFNKE LQVEG ++  SL+A   G+ +E                                  R   G+++  +R R  D  +G     
Subjt:  QQSGESLRDYITRFNKEALQVEGYSEGASLVAITTGLENES-------------------------------RPRLEEGQKSADRRRRPSDPSRG-----

Query:  --RPDRGDYLRKFEKYTITSIPQEQILMEIWNTNLLNVPRKLKSNPDKGEKSQYCLFHRDHGHSTRICIQLKDKIKALVQNGYLKEF
          R  + D  +KFEKYT T++P EQ+LMEI N  LL  P ++ ++  K  K +YCLFH DHGH+T+ C  LK++++ L+  GYLKE+
Subjt:  --RPDRGDYLRKFEKYTITSIPQEQILMEIWNTNLLNVPRKLKSNPDKGEKSQYCLFHRDHGHSTRICIQLKDKIKALVQNGYLKEF

XP_022158830.1 uncharacterized protein LOC111025293 [Momordica charantia]1.6e-2736.76Show/hide
Query:  MGAKEQRMPHINLLTVIQQSGESLRDYITRFNKEALQVEGYSEGASLVAITTGLENES-------------------------------RPRLEEGQKSA
        +G + +  P   LLT+ Q++ ESLRDY+ RFN+E LQVEG ++  SL+A  +G+ +E                                  R  +G+++ 
Subjt:  MGAKEQRMPHINLLTVIQQSGESLRDYITRFNKEALQVEGYSEGASLVAITTGLENES-------------------------------RPRLEEGQKSA

Query:  DRRRRPSDPSRG-------RPDRGDYLRKFEKYTITSIPQEQILMEIWNTNLLNVPRKLKSNPDKGEKSQYCLFHRDHGHSTRICIQLKDKIKALVQNGY
         +R R  D  +G       R  + D  RKFEKYT T++P EQ+LMEI +  LL  P ++K++  K  K +YCLFHRDHGH+T+ C  LK++++ L++ GY
Subjt:  DRRRRPSDPSRG-------RPDRGDYLRKFEKYTITSIPQEQILMEIWNTNLLNVPRKLKSNPDKGEKSQYCLFHRDHGHSTRICIQLKDKIKALVQNGY

Query:  LKEF
        LKE+
Subjt:  LKEF

XP_022159368.1 uncharacterized protein LOC111025785 [Momordica charantia]1.8e-2334.31Show/hide
Query:  MGAKEQRMPHINLLTVIQQSGESLRDYITRFNKEALQVEGYSEGASLVAITTGLENES-------------------------------RPRLEEGQKSA
        +G + +  P   LLT+ Q++ ESL DY+ RFNKE LQ+E  ++  SL+A  +G+ +E                                  R  +G+++ 
Subjt:  MGAKEQRMPHINLLTVIQQSGESLRDYITRFNKEALQVEGYSEGASLVAITTGLENES-------------------------------RPRLEEGQKSA

Query:  DRRRRPSDPSRG-------RPDRGDYLRKFEKYTITSIPQEQILMEIWNTNLLNVPRKLKSNPDKGEKSQYCLFHRDHGHSTRICIQLKDKIKALVQNGY
         +R R  D  +G       R  + D  RKFEKYT T++P EQ+LMEI +  LL  P ++K    K  K +YCLFHRDH H+T+    LK++++ L++ GY
Subjt:  DRRRRPSDPSRG-------RPDRGDYLRKFEKYTITSIPQEQILMEIWNTNLLNVPRKLKSNPDKGEKSQYCLFHRDHGHSTRICIQLKDKIKALVQNGY

Query:  LKEF
        L+E+
Subjt:  LKEF

XP_024041095.1 uncharacterized protein LOC112098853 [Citrus clementina]7.7e-2231.67Show/hide
Query:  AKEQRMPHINLLTVIQQSGESLRDYITRFNKEALQVEGYSEGASLVAITTGL------------------------------------ENESRPRLEEGQ
        A+++  P   LLTV QQ GE+LRDYI R+N E  QV+GY +G +L  I  GL                                     N+ +    +G+
Subjt:  AKEQRMPHINLLTVIQQSGESLRDYITRFNKEALQVEGYSEGASLVAITTGL------------------------------------ENESRPRLEEGQ

Query:  KSADRRR----------------RPSDPSRGRPDRGDYLRKFEKYTITSIPQEQILMEIWNTNLLNVPRKLKSNPDKGEKSQYCLFHRDHGHSTRICIQL
        K  D +R                RP + S  R  R     +F  +T  + P+EQILM++ N  L   P  +K+NP +   ++YC FH+DHGH T  C +L
Subjt:  KSADRRR----------------RPSDPSRGRPDRGDYLRKFEKYTITSIPQEQILMEIWNTNLLNVPRKLKSNPDKGEKSQYCLFHRDHGHSTRICIQL

Query:  KDKIKALVQNGYLKEFTTKAE
        K++I++LV+ G L+E+    E
Subjt:  KDKIKALVQNGYLKEFTTKAE

XP_024042801.1 uncharacterized protein LOC112099618 [Citrus clementina]8.2e-2432.86Show/hide
Query:  MGAKEQRMPHINLLTVIQQSGESLRDYITRFNKEALQVEGYSEGASLVAITTGLE---------------------------------------NESRPR
        +GA++Q+ P    L V Q   ESL+D ITRFNKE ++VE YS+  +L  I  GL+                                       N   PR
Subjt:  MGAKEQRMPHINLLTVIQQSGESLRDYITRFNKEALQVEGYSEGASLVAITTGLE---------------------------------------NESRPR

Query:  LEEGQKSADRRRRPSDPSRGRPDRGDYL--RKFEKYTITSIPQEQILMEIWNTNLLNVPRKLKSNPDKGEKSQYCLFHRDHGHSTRICIQLKDKIKALVQ
        + E +K  + + +  + +     +G  +   +F +YT  ++P+EQ+LM+I N +LL  P+ +K  P++ ++S+YC +HRDH H+   C  LK++IK+L+Q
Subjt:  LEEGQKSADRRRRPSDPSRGRPDRGDYL--RKFEKYTITSIPQEQILMEIWNTNLLNVPRKLKSNPDKGEKSQYCLFHRDHGHSTRICIQLKDKIKALVQ

Query:  NGYLKEFTTK
         GYLKEF  K
Subjt:  NGYLKEFTTK

TrEMBL top hitse value%identityAlignment
A0A2N9F1B5 Ribonuclease H5.4e-2133.99Show/hide
Query:  MGAKEQRMPHINLLTVIQQSGESLRDYITRFNKEALQVEGYSEGASLVAITTGLENES-------------RPRLEEGQK-SADRRRRPSDPSRGRP---
        +G +    P  +LL V Q+ GE+LR Y+TRFNKE L V+G  +   L A  +GL++E                 +  G+K   D   RP++P   RP   
Subjt:  MGAKEQRMPHINLLTVIQQSGESLRDYITRFNKEALQVEGYSEGASLVAITTGLENES-------------RPRLEEGQK-SADRRRRPSDPSRGRP---

Query:  -----------DRGDYLRKFEKYTITSIPQEQILMEIWNTNLLNVPRKLKSNPDKGEKSQYCLFHRDHGHSTRICIQLKDKIKALVQNGYLKEFTTKAEV
                    RG +  +F ++T  + P + I M+I N   L  P KL ++PDK  + +YC FHRDHGH+T  C  LK +I+ L++ G L+ F  K + 
Subjt:  -----------DRGDYLRKFEKYTITSIPQEQILMEIWNTNLLNVPRKLKSNPDKGEKSQYCLFHRDHGHSTRICIQLKDKIKALVQNGYLKEFTTKAEV

Query:  DHR
        + R
Subjt:  DHR

A0A2N9I6T5 Uncharacterized protein9.1e-2134.52Show/hide
Query:  MGAKEQRMPHINLLTVIQQSGESLRDYITRFNKEALQVEGYSEGASLVAITTGLENE----SRPRLEEGQKSADRRR-----RPSDPSRGRP--------
        +GA+    P  +LL + Q+ GE+LR Y+TRFNKE L V+G  +   L+A  +GL+      S   L   Q    +R+     RP++P   RP        
Subjt:  MGAKEQRMPHINLLTVIQQSGESLRDYITRFNKEALQVEGYSEGASLVAITTGLENE----SRPRLEEGQKSADRRR-----RPSDPSRGRP--------

Query:  ---DRG--DYLRKFEKYTITSIPQEQILMEIWNTNLLNVPRKLKSNPDKGEKSQYCLFHRDHGHSTRICIQLKDKIKALVQNGYLKEFTTKAEVDHR
           DR    +  +F  +T  + P + I M+I N   L  P KL ++PDK  + +YC FHRDHGH+T  C  LK +I+ L++ G L+ F  + + + R
Subjt:  ---DRG--DYLRKFEKYTITSIPQEQILMEIWNTNLLNVPRKLKSNPDKGEKSQYCLFHRDHGHSTRICIQLKDKIKALVQNGYLKEFTTKAEVDHR

A0A6J1CNT2 uncharacterized protein LOC1110128051.5e-2336.36Show/hide
Query:  QQSGESLRDYITRFNKEALQVEGYSEGASLVAITTGLENES-------------------------------RPRLEEGQKSADRRRRPSDPSRG-----
        +++ ESL DY+TRFNKE LQVEG ++  SL+A   G+ +E                                  R   G+++  +R R  D  +G     
Subjt:  QQSGESLRDYITRFNKEALQVEGYSEGASLVAITTGLENES-------------------------------RPRLEEGQKSADRRRRPSDPSRG-----

Query:  --RPDRGDYLRKFEKYTITSIPQEQILMEIWNTNLLNVPRKLKSNPDKGEKSQYCLFHRDHGHSTRICIQLKDKIKALVQNGYLKEF
          R  + D  +KFEKYT T++P EQ+LMEI N  LL  P ++ ++  K  K +YCLFH DHGH+T+ C  LK++++ L+  GYLKE+
Subjt:  --RPDRGDYLRKFEKYTITSIPQEQILMEIWNTNLLNVPRKLKSNPDKGEKSQYCLFHRDHGHSTRICIQLKDKIKALVQNGYLKEF

A0A6J1DWY0 uncharacterized protein LOC1110252937.7e-2836.76Show/hide
Query:  MGAKEQRMPHINLLTVIQQSGESLRDYITRFNKEALQVEGYSEGASLVAITTGLENES-------------------------------RPRLEEGQKSA
        +G + +  P   LLT+ Q++ ESLRDY+ RFN+E LQVEG ++  SL+A  +G+ +E                                  R  +G+++ 
Subjt:  MGAKEQRMPHINLLTVIQQSGESLRDYITRFNKEALQVEGYSEGASLVAITTGLENES-------------------------------RPRLEEGQKSA

Query:  DRRRRPSDPSRG-------RPDRGDYLRKFEKYTITSIPQEQILMEIWNTNLLNVPRKLKSNPDKGEKSQYCLFHRDHGHSTRICIQLKDKIKALVQNGY
         +R R  D  +G       R  + D  RKFEKYT T++P EQ+LMEI +  LL  P ++K++  K  K +YCLFHRDHGH+T+ C  LK++++ L++ GY
Subjt:  DRRRRPSDPSRG-------RPDRGDYLRKFEKYTITSIPQEQILMEIWNTNLLNVPRKLKSNPDKGEKSQYCLFHRDHGHSTRICIQLKDKIKALVQNGY

Query:  LKEF
        LKE+
Subjt:  LKEF

A0A6J1DYL6 uncharacterized protein LOC1110257858.8e-2434.31Show/hide
Query:  MGAKEQRMPHINLLTVIQQSGESLRDYITRFNKEALQVEGYSEGASLVAITTGLENES-------------------------------RPRLEEGQKSA
        +G + +  P   LLT+ Q++ ESL DY+ RFNKE LQ+E  ++  SL+A  +G+ +E                                  R  +G+++ 
Subjt:  MGAKEQRMPHINLLTVIQQSGESLRDYITRFNKEALQVEGYSEGASLVAITTGLENES-------------------------------RPRLEEGQKSA

Query:  DRRRRPSDPSRG-------RPDRGDYLRKFEKYTITSIPQEQILMEIWNTNLLNVPRKLKSNPDKGEKSQYCLFHRDHGHSTRICIQLKDKIKALVQNGY
         +R R  D  +G       R  + D  RKFEKYT T++P EQ+LMEI +  LL  P ++K    K  K +YCLFHRDH H+T+    LK++++ L++ GY
Subjt:  DRRRRPSDPSRG-------RPDRGDYLRKFEKYTITSIPQEQILMEIWNTNLLNVPRKLKSNPDKGEKSQYCLFHRDHGHSTRICIQLKDKIKALVQNGY

Query:  LKEF
        L+E+
Subjt:  LKEF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGCCAAAGAACAACGCATGCCTCACATCAACCTTCTAACTGTTATACAACAGTCAGGTGAGAGCTTGCGTGATTATATAACACGTTTTAACAAGGAAGCACTGCA
GGTTGAGGGATACAGTGAGGGGGCATCCCTAGTAGCCATCACAACCGGACTGGAGAACGAGAGTCGACCGAGACTAGAAGAAGGACAAAAGAGTGCGGACAGACGAAGGA
GGCCGAGCGACCCTAGCCGAGGCCGACCAGACCGAGGAGACTACTTAAGGAAGTTTGAAAAGTACACTATTACCTCAATCCCACAGGAGCAAATTTTGATGGAAATCTGG
AATACGAACCTGCTTAACGTGCCTAGAAAATTGAAGTCAAATCCTGACAAAGGAGAGAAAAGTCAGTATTGTCTCTTCCATCGAGATCATGGACATTCAACTAGGATCTG
CATTCAGCTGAAGGACAAAATTAAAGCACTGGTTCAAAACGGATACCTGAAGGAGTTCACCACTAAGGCCGAGGTCGACCACAGATAG
mRNA sequenceShow/hide mRNA sequence
ATGGGAGCCAAAGAACAACGCATGCCTCACATCAACCTTCTAACTGTTATACAACAGTCAGGTGAGAGCTTGCGTGATTATATAACACGTTTTAACAAGGAAGCACTGCA
GGTTGAGGGATACAGTGAGGGGGCATCCCTAGTAGCCATCACAACCGGACTGGAGAACGAGAGTCGACCGAGACTAGAAGAAGGACAAAAGAGTGCGGACAGACGAAGGA
GGCCGAGCGACCCTAGCCGAGGCCGACCAGACCGAGGAGACTACTTAAGGAAGTTTGAAAAGTACACTATTACCTCAATCCCACAGGAGCAAATTTTGATGGAAATCTGG
AATACGAACCTGCTTAACGTGCCTAGAAAATTGAAGTCAAATCCTGACAAAGGAGAGAAAAGTCAGTATTGTCTCTTCCATCGAGATCATGGACATTCAACTAGGATCTG
CATTCAGCTGAAGGACAAAATTAAAGCACTGGTTCAAAACGGATACCTGAAGGAGTTCACCACTAAGGCCGAGGTCGACCACAGATAG
Protein sequenceShow/hide protein sequence
MGAKEQRMPHINLLTVIQQSGESLRDYITRFNKEALQVEGYSEGASLVAITTGLENESRPRLEEGQKSADRRRRPSDPSRGRPDRGDYLRKFEKYTITSIPQEQILMEIW
NTNLLNVPRKLKSNPDKGEKSQYCLFHRDHGHSTRICIQLKDKIKALVQNGYLKEFTTKAEVDHR