CuGenDBv2

Gene ID	Lag0018584
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1
Genome location	chr5:30037106..30037744
RNA-Seq Expression	Lag0018584
Synteny	Lag0018584
Gene Ontology terms	GO:0010258 - NADH dehydrogenase complex (plastoquinone) assembly (biological process) GO:0009570 - chloroplast stroma (cellular component)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0025435.1 Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1 [Cucumis melo var. makuwa]

3.3e-96

89.2

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Query:  MASSHLHLLSAPNP-LLLRQSQPTFTNPLQLTWKQHLSIKCSSQDSESDPNFPSPDPKFSTLNEPESFPIKKRRRSEIVRQRRPTKEIAKPEPPNFEIGW
        MASSHLH LS PNP LLL QS P+FT PLQ+T K+ LSIK +SQDSESDPNFPSPDPKFS LN+PE+FPI+KRRRSEI+RQR+PT EIAKPEPPNFEIGW
Subjt:  MASSHLHLLSAPNP-LLLRQSQPTFTNPLQLTWKQHLSIKCSSQDSESDPNFPSPDPKFSTLNEPESFPIKKRRRSEIVRQRRPTKEIAKPEPPNFEIGW

Query:  TRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVDDRMVTELFRVLKLMEMDLAMVKAAVKDETLSERLGQAK
         RTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKV++RMVTELFRVLKLMEMDLAMVKAAVKDETLSERLGQAK
Subjt:  TRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVDDRMVTELFRVLKLMEMDLAMVKAAVKDETLSERLGQAK

Query:  ARCRQAILVANSF
        ARCRQAILVANSF
Subjt:  ARCRQAILVANSF

XP_004152910.2 uncharacterized protein LOC101210146 [Cucumis sativus]

1.1e-94

86.85

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Query:  MASSHLHLLSAPNP-LLLRQSQPTFTNPLQLTWKQHLSIKCSSQDSESDPNFPSPDPKFSTLNEPESFPIKKRRRSEIVRQRRPTKEIAKPEPPNFEIGW
        MASSHLH LS PNP LLL QS P+FT PLQ+T K+ LSIKC+SQDSESDPNFPSPDP F  LN+PE+FPI+KRRRS+I+RQR+P+ EIAKPEPPNFEIGW
Subjt:  MASSHLHLLSAPNP-LLLRQSQPTFTNPLQLTWKQHLSIKCSSQDSESDPNFPSPDPKFSTLNEPESFPIKKRRRSEIVRQRRPTKEIAKPEPPNFEIGW

Query:  TRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVDDRMVTELFRVLKLMEMDLAMVKAAVKDETLSERLGQAK
         RTKEI++EKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKV++RMVTELFRVLKLMEMDLAMVKAAVKDETLSERLGQAK
Subjt:  TRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVDDRMVTELFRVLKLMEMDLAMVKAAVKDETLSERLGQAK

Query:  ARCRQAILVANSF
        ARCRQAILVANSF
Subjt:  ARCRQAILVANSF

XP_008452345.1 PREDICTED: uncharacterized protein LOC103493403 [Cucumis melo]

1.3e-95

88.73

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Query:  MASSHLHLLSAPNP-LLLRQSQPTFTNPLQLTWKQHLSIKCSSQDSESDPNFPSPDPKFSTLNEPESFPIKKRRRSEIVRQRRPTKEIAKPEPPNFEIGW
        MASSHLH LS PNP LLL QS P+FT PLQ+T K+ LSIK +SQDSESDPNFPSPDP FS LN+PE+FPI+KRRRSEI+RQR+PT EIAKPEPPNFEIGW
Subjt:  MASSHLHLLSAPNP-LLLRQSQPTFTNPLQLTWKQHLSIKCSSQDSESDPNFPSPDPKFSTLNEPESFPIKKRRRSEIVRQRRPTKEIAKPEPPNFEIGW

Query:  TRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVDDRMVTELFRVLKLMEMDLAMVKAAVKDETLSERLGQAK
         RTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKV++RMVTELFRVLKLMEMDLAMVKAAVKDETLSERLGQAK
Subjt:  TRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVDDRMVTELFRVLKLMEMDLAMVKAAVKDETLSERLGQAK

Query:  ARCRQAILVANSF
        ARCRQAILVANSF
Subjt:  ARCRQAILVANSF

XP_022932131.1 uncharacterized protein LOC111438454 [Cucurbita moschata]

1.5e-93

86.85

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Query:  MASSHLHLLSAPNP-LLLRQSQPTFTNPLQLTWKQHLSIKCSSQDSESDPNFPSPDPKFSTLNEPESFPIKKRRRSEIVRQRRPTKEIAKPEPPNFEIGW
        MA  HLHLL APNP LLL +SQPTFTNPLQ+T K+ LS+KCSS+ SESDPNFPSP+P F  LN+PESFPI+KRRRSEIVRQRRP+K+I KPEPPNFEIGW
Subjt:  MASSHLHLLSAPNP-LLLRQSQPTFTNPLQLTWKQHLSIKCSSQDSESDPNFPSPDPKFSTLNEPESFPIKKRRRSEIVRQRRPTKEIAKPEPPNFEIGW

Query:  TRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVDDRMVTELFRVLKLMEMDLAMVKAAVKDETLSERLGQAK
         RTKEINLEKP+GWMIMDFLEKLE LMEREFGSTELLAKVGEIVAERAREEAEIL DDGKV+DRMVTELFRVLKLMEMDLAMVKAAVKDETLSERL QAK
Subjt:  TRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVDDRMVTELFRVLKLMEMDLAMVKAAVKDETLSERLGQAK

Query:  ARCRQAILVANSF
        ARCRQAILVANSF
Subjt:  ARCRQAILVANSF

XP_022985263.1 uncharacterized protein LOC111483306 [Cucurbita maxima]

2.0e-93

85.92

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Query:  MASSHLHLLSAPNP-LLLRQSQPTFTNPLQLTWKQHLSIKCSSQDSESDPNFPSPDPKFSTLNEPESFPIKKRRRSEIVRQRRPTKEIAKPEPPNFEIGW
        MA  HLH+L APNP LLL QSQPTFTNPLQ+T K+ LS+KCSS+ SESDPNFPSPDP F  LN+PESFP++KRRRSEIVRQRRP+KEI KPEPPNFEIGW
Subjt:  MASSHLHLLSAPNP-LLLRQSQPTFTNPLQLTWKQHLSIKCSSQDSESDPNFPSPDPKFSTLNEPESFPIKKRRRSEIVRQRRPTKEIAKPEPPNFEIGW

Query:  TRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVDDRMVTELFRVLKLMEMDLAMVKAAVKDETLSERLGQAK
         RTKEINLEKP+GWMIMDFLEKLE LMEREFGSTELLAKVGEIVAERAREEAEIL DDGKV+DRMVTELFRVLKLMEMDLAMVKAAV+DETL++RL QAK
Subjt:  TRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVDDRMVTELFRVLKLMEMDLAMVKAAVKDETLSERLGQAK

Query:  ARCRQAILVANSF
        ARCRQAILVANSF
Subjt:  ARCRQAILVANSF

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L6D8 Uncharacterized protein

5.2e-95

86.85

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Query:  MASSHLHLLSAPNP-LLLRQSQPTFTNPLQLTWKQHLSIKCSSQDSESDPNFPSPDPKFSTLNEPESFPIKKRRRSEIVRQRRPTKEIAKPEPPNFEIGW
        MASSHLH LS PNP LLL QS P+FT PLQ+T K+ LSIKC+SQDSESDPNFPSPDP F  LN+PE+FPI+KRRRS+I+RQR+P+ EIAKPEPPNFEIGW
Subjt:  MASSHLHLLSAPNP-LLLRQSQPTFTNPLQLTWKQHLSIKCSSQDSESDPNFPSPDPKFSTLNEPESFPIKKRRRSEIVRQRRPTKEIAKPEPPNFEIGW

Query:  TRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVDDRMVTELFRVLKLMEMDLAMVKAAVKDETLSERLGQAK
         RTKEI++EKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKV++RMVTELFRVLKLMEMDLAMVKAAVKDETLSERLGQAK
Subjt:  TRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVDDRMVTELFRVLKLMEMDLAMVKAAVKDETLSERLGQAK

Query:  ARCRQAILVANSF
        ARCRQAILVANSF
Subjt:  ARCRQAILVANSF

A0A1S3BT06 uncharacterized protein LOC103493403

6.1e-96

88.73

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Query:  MASSHLHLLSAPNP-LLLRQSQPTFTNPLQLTWKQHLSIKCSSQDSESDPNFPSPDPKFSTLNEPESFPIKKRRRSEIVRQRRPTKEIAKPEPPNFEIGW
        MASSHLH LS PNP LLL QS P+FT PLQ+T K+ LSIK +SQDSESDPNFPSPDP FS LN+PE+FPI+KRRRSEI+RQR+PT EIAKPEPPNFEIGW
Subjt:  MASSHLHLLSAPNP-LLLRQSQPTFTNPLQLTWKQHLSIKCSSQDSESDPNFPSPDPKFSTLNEPESFPIKKRRRSEIVRQRRPTKEIAKPEPPNFEIGW

Query:  TRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVDDRMVTELFRVLKLMEMDLAMVKAAVKDETLSERLGQAK
         RTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKV++RMVTELFRVLKLMEMDLAMVKAAVKDETLSERLGQAK
Subjt:  TRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVDDRMVTELFRVLKLMEMDLAMVKAAVKDETLSERLGQAK

Query:  ARCRQAILVANSF
        ARCRQAILVANSF
Subjt:  ARCRQAILVANSF

A0A5D3C0F1 Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1

1.6e-96

89.2

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Query:  MASSHLHLLSAPNP-LLLRQSQPTFTNPLQLTWKQHLSIKCSSQDSESDPNFPSPDPKFSTLNEPESFPIKKRRRSEIVRQRRPTKEIAKPEPPNFEIGW
        MASSHLH LS PNP LLL QS P+FT PLQ+T K+ LSIK +SQDSESDPNFPSPDPKFS LN+PE+FPI+KRRRSEI+RQR+PT EIAKPEPPNFEIGW
Subjt:  MASSHLHLLSAPNP-LLLRQSQPTFTNPLQLTWKQHLSIKCSSQDSESDPNFPSPDPKFSTLNEPESFPIKKRRRSEIVRQRRPTKEIAKPEPPNFEIGW

Query:  TRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVDDRMVTELFRVLKLMEMDLAMVKAAVKDETLSERLGQAK
         RTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKV++RMVTELFRVLKLMEMDLAMVKAAVKDETLSERLGQAK
Subjt:  TRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVDDRMVTELFRVLKLMEMDLAMVKAAVKDETLSERLGQAK

Query:  ARCRQAILVANSF
        ARCRQAILVANSF
Subjt:  ARCRQAILVANSF

A0A6J1EVI2 uncharacterized protein LOC111438454

7.5e-94

86.85

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Query:  MASSHLHLLSAPNP-LLLRQSQPTFTNPLQLTWKQHLSIKCSSQDSESDPNFPSPDPKFSTLNEPESFPIKKRRRSEIVRQRRPTKEIAKPEPPNFEIGW
        MA  HLHLL APNP LLL +SQPTFTNPLQ+T K+ LS+KCSS+ SESDPNFPSP+P F  LN+PESFPI+KRRRSEIVRQRRP+K+I KPEPPNFEIGW
Subjt:  MASSHLHLLSAPNP-LLLRQSQPTFTNPLQLTWKQHLSIKCSSQDSESDPNFPSPDPKFSTLNEPESFPIKKRRRSEIVRQRRPTKEIAKPEPPNFEIGW

Query:  TRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVDDRMVTELFRVLKLMEMDLAMVKAAVKDETLSERLGQAK
         RTKEINLEKP+GWMIMDFLEKLE LMEREFGSTELLAKVGEIVAERAREEAEIL DDGKV+DRMVTELFRVLKLMEMDLAMVKAAVKDETLSERL QAK
Subjt:  TRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVDDRMVTELFRVLKLMEMDLAMVKAAVKDETLSERLGQAK

Query:  ARCRQAILVANSF
        ARCRQAILVANSF
Subjt:  ARCRQAILVANSF

A0A6J1JD53 uncharacterized protein LOC111483306

9.8e-94

85.92

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Query:  MASSHLHLLSAPNP-LLLRQSQPTFTNPLQLTWKQHLSIKCSSQDSESDPNFPSPDPKFSTLNEPESFPIKKRRRSEIVRQRRPTKEIAKPEPPNFEIGW
        MA  HLH+L APNP LLL QSQPTFTNPLQ+T K+ LS+KCSS+ SESDPNFPSPDP F  LN+PESFP++KRRRSEIVRQRRP+KEI KPEPPNFEIGW
Subjt:  MASSHLHLLSAPNP-LLLRQSQPTFTNPLQLTWKQHLSIKCSSQDSESDPNFPSPDPKFSTLNEPESFPIKKRRRSEIVRQRRPTKEIAKPEPPNFEIGW

Query:  TRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVDDRMVTELFRVLKLMEMDLAMVKAAVKDETLSERLGQAK
         RTKEINLEKP+GWMIMDFLEKLE LMEREFGSTELLAKVGEIVAERAREEAEIL DDGKV+DRMVTELFRVLKLMEMDLAMVKAAV+DETL++RL QAK
Subjt:  TRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVDDRMVTELFRVLKLMEMDLAMVKAAVKDETLSERLGQAK

Query:  ARCRQAILVANSF
        ARCRQAILVANSF
Subjt:  ARCRQAILVANSF

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G51100.1 unknown protein

2.2e-61

64.95

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Query:  MASSHLHLLSAPNPLLLRQSQPTFTNP-LQLTWKQHLSIKCSSQDSESDPNFP-SPDPKFSTLNEPESFPIKKRRRSEIVRQRRPTKEIAKPEPPNFEIG
        MAS+   LL + +   L  + P  TN  ++ T K   S KCSS     D     +P P+       E FPI+KRRRSEI+R  R  + I KPEPPNFEIG
Subjt:  MASSHLHLLSAPNPLLLRQSQPTFTNP-LQLTWKQHLSIKCSSQDSESDPNFP-SPDPKFSTLNEPESFPIKKRRRSEIVRQRRPTKEIAKPEPPNFEIG

Query:  WTRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVDDRMVTELFRVLKLMEMDLAMVKAAVKDETLSERLGQA
        W RTKEINLEKP G++IMDFLEK E LM REFGS ELLAK GEIVAERAREEAE+LRD+GKV++RMVTELFRVLKLMEMDLAMVKA+VKDETLS+R+ QA
Subjt:  WTRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVDDRMVTELFRVLKLMEMDLAMVKAAVKDETLSERLGQA

Query:  KARCRQAILVANSF
        +ARCRQAILVANSF
Subjt:  KARCRQAILVANSF

Sequences

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CDS sequence

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ATGGCTTCCTCACACCTCCATCTCCTCTCTGCCCCAAACCCCCTTCTTCTCCGTCAATCTCAGCCCACTTTCACAAACCCATTACAACTTACATGGAAACAGCACCTCTC
AATCAAATGCAGCTCACAAGACTCCGAATCGGACCCCAACTTCCCATCCCCAGATCCCAAATTCAGCACCCTAAACGAGCCAGAGAGCTTCCCAATCAAGAAGCGAAGAA
GATCCGAAATAGTCCGCCAAAGAAGACCCACAAAGGAAATCGCAAAGCCGGAGCCGCCAAACTTCGAAATCGGGTGGACGAGGACGAAAGAGATCAATTTGGAGAAGCCG
ATCGGGTGGATGATAATGGACTTTCTGGAGAAGCTTGAAGGGCTAATGGAGAGGGAATTTGGGTCGACGGAGTTACTGGCCAAAGTGGGAGAGATTGTGGCGGAGAGGGC
CAGAGAGGAGGCCGAGATCTTGAGAGACGATGGCAAAGTGGATGACAGAATGGTTACTGAGTTGTTTAGGGTTTTGAAGTTGATGGAGATGGATTTAGCTATGGTGAAGG
CCGCTGTGAAGGATGAGACCTTGAGTGAGCGGCTTGGGCAGGCCAAAGCTAGGTGCAGGCAAGCTATACTTGTTGCTAATTCTTTCTGA

mRNA sequence

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Protein sequence

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MASSHLHLLSAPNPLLLRQSQPTFTNPLQLTWKQHLSIKCSSQDSESDPNFPSPDPKFSTLNEPESFPIKKRRRSEIVRQRRPTKEIAKPEPPNFEIGWTRTKEINLEKP
IGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVDDRMVTELFRVLKLMEMDLAMVKAAVKDETLSERLGQAKARCRQAILVANSF

Lag0018584 (gene) of Sponge gourd (AG-4) v1 genome