; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0018601 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0018601
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase
Genome locationchr5:30472860..30475876
RNA-Seq ExpressionLag0018601
SyntenyLag0018601
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0026280.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]2.0e-1845.31Show/hide
Query:  MPRGGRTRRLQDLETQQTSDGQNSVEEETVGESSHQHVNQTENVNEEDEQLTARIVQGIAVGMQMIRNDPEKNFRIERLKALGATTFAGTTDPYDAKLWM
        MP+ GR R+  D E    +        E+  ESS  HV         +EQL  R+ Q + +G+++ ++D EK + IERLKALGATTF GTT+P DA+ W+
Subjt:  MPRGGRTRRLQDLETQQTSDGQNSVEEETVGESSHQHVNQTENVNEEDEQLTARIVQGIAVGMQMIRNDPEKNFRIERLKALGATTFAGTTDPYDAKLWM

Query:  EMLEKCFNVMGCPKDRKVRLATFLLQGG
         ++EKCF V  C +DRKV LA FLLQ G
Subjt:  EMLEKCFNVMGCPKDRKVRLATFLLQGG

KAA0035225.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]5.7e-2147.69Show/hide
Query:  GIMPRGGRTRRLQDLETQQTSDGQNSVEEETVGESSHQHVNQTENVNEEDEQLTARIVQGIAVGMQMIRNDPEKNFRIERLKALGATTFAGTTDPYDAKL
        G MPR GR R+  D +T   +        E+  ESS  HV         +EQL  R+ Q +  G++  ++DPEK + IERLKALGATTF GTT+P DA+ 
Subjt:  GIMPRGGRTRRLQDLETQQTSDGQNSVEEETVGESSHQHVNQTENVNEEDEQLTARIVQGIAVGMQMIRNDPEKNFRIERLKALGATTFAGTTDPYDAKL

Query:  WMEMLEKCFNVMGCPKDRKVRLATFLLQGG
        W+ ++EKCF V  CP+DRKV LA+FLLQ G
Subjt:  WMEMLEKCFNVMGCPKDRKVRLATFLLQGG

KAA0047616.1 uncharacterized protein E6C27_scaffold115G00890 [Cucumis melo var. makuwa]4.1e-1950Show/hide
Query:  MPRGGRTRRLQDLETQQTSDGQNSVEEETVGESSHQHVNQTENVNEEDEQLTARIVQGIAVGMQMIRNDPEKNFRIERLKALGATTFAGTTDPYDAKLWM
        MPR GR R+L   E    +       EE+  ESS  HV     VN E EQL  R+ QG+  G++  +++ EKNF IERLKALGATTFAGTT+  DA+ W+
Subjt:  MPRGGRTRRLQDLETQQTSDGQNSVEEETVGESSHQHVNQTENVNEEDEQLTARIVQGIAVGMQMIRNDPEKNFRIERLKALGATTFAGTTDPYDAKLWM

Query:  EMLEKCFNVMGCPKDRKVRLATFLLQGG
         ++EKCF VM C +DRKV L  FLL+ G
Subjt:  EMLEKCFNVMGCPKDRKVRLATFLLQGG

XP_038890030.1 uncharacterized protein LOC120079741 [Benincasa hispida]3.5e-1863.01Show/hide
Query:  RIVQGIAVGMQMIRNDPEKNFRIERLKALGATTFAGTTDPYDAKLWMEMLEKCFNVMGCPKDRKVRLATFLLQ
        RIVQ +A  + ++R + EK + IER KALGA TF GTTDP +A+LW++++EKCFNVM CP+DRKV LATFLLQ
Subjt:  RIVQGIAVGMQMIRNDPEKNFRIERLKALGATTFAGTTDPYDAKLWMEMLEKCFNVMGCPKDRKVRLATFLLQ

XP_038896416.1 uncharacterized protein LOC120084680 [Benincasa hispida]4.9e-2061.73Show/hide
Query:  DEQLTARIVQGIAVGMQMIRNDPEKNFRIERLKALGATTFAGTTDPYDAKLWMEMLEKCFNVMGCPKDRKVRLATFLLQGG
        ++++  RI Q +A  +  I+NDPEK F IERLKALGATTF GTTDP DA++W+ ++EKCF VM CP+D KV LATFLLQ G
Subjt:  DEQLTARIVQGIAVGMQMIRNDPEKNFRIERLKALGATTFAGTTDPYDAKLWMEMLEKCFNVMGCPKDRKVRLATFLLQGG

TrEMBL top hitse value%identityAlignment
A0A5A7SJ99 DNA/RNA polymerases superfamily protein9.9e-1945.31Show/hide
Query:  MPRGGRTRRLQDLETQQTSDGQNSVEEETVGESSHQHVNQTENVNEEDEQLTARIVQGIAVGMQMIRNDPEKNFRIERLKALGATTFAGTTDPYDAKLWM
        MP+ GR R+  D E    +        E+  ESS  HV         +EQL  R+ Q + +G+++ ++D EK + IERLKALGATTF GTT+P DA+ W+
Subjt:  MPRGGRTRRLQDLETQQTSDGQNSVEEETVGESSHQHVNQTENVNEEDEQLTARIVQGIAVGMQMIRNDPEKNFRIERLKALGATTFAGTTDPYDAKLWM

Query:  EMLEKCFNVMGCPKDRKVRLATFLLQGG
         ++EKCF V  C +DRKV LA FLLQ G
Subjt:  EMLEKCFNVMGCPKDRKVRLATFLLQGG

A0A5A7U067 Retrotrans_gag domain-containing protein2.0e-1950Show/hide
Query:  MPRGGRTRRLQDLETQQTSDGQNSVEEETVGESSHQHVNQTENVNEEDEQLTARIVQGIAVGMQMIRNDPEKNFRIERLKALGATTFAGTTDPYDAKLWM
        MPR GR R+L   E    +       EE+  ESS  HV     VN E EQL  R+ QG+  G++  +++ EKNF IERLKALGATTFAGTT+  DA+ W+
Subjt:  MPRGGRTRRLQDLETQQTSDGQNSVEEETVGESSHQHVNQTENVNEEDEQLTARIVQGIAVGMQMIRNDPEKNFRIERLKALGATTFAGTTDPYDAKLWM

Query:  EMLEKCFNVMGCPKDRKVRLATFLLQGG
         ++EKCF VM C +DRKV L  FLL+ G
Subjt:  EMLEKCFNVMGCPKDRKVRLATFLLQGG

A0A5A7UI35 Reverse transcriptase4.9e-1851.59Show/hide
Query:  PRGGRTRRLQDLETQQTSDG-QNSVEEETVGESSHQHVNQTENVNEEDEQLTARIVQGIAVGMQMIRNDPEKNFRIERLKALGATTFAGTTDPYDAKLWM
        PR GR RR       Q  DG Q   +  +VGESS   V      NE+     AR  Q I    ++  +DPEK +RIERLK LGAT F G+TDP DA+ W+
Subjt:  PRGGRTRRLQDLETQQTSDG-QNSVEEETVGESSHQHVNQTENVNEEDEQLTARIVQGIAVGMQMIRNDPEKNFRIERLKALGATTFAGTTDPYDAKLWM

Query:  EMLEKCFNVMGCPKDRKVRLATFLLQ
         MLEKCF+VM CP++RKVRLATFLLQ
Subjt:  EMLEKCFNVMGCPKDRKVRLATFLLQ

A0A5D3CU23 Retrotrans_gag domain-containing protein6.4e-1843.7Show/hide
Query:  VVDWSLGGIMPRGGRTRRLQDLETQQTSDGQNSVEEETVGESSHQHVNQTENVNEEDEQLTARIVQGIAVGMQMIRNDPEKNFRIERLKALGATTFAGTT
        V  W    +MPR    RR Q+         Q+ ++  T G+ S +  +   + NE   +  AR  Q I    ++  +DPEK + IERLK LGAT F G+T
Subjt:  VVDWSLGGIMPRGGRTRRLQDLETQQTSDGQNSVEEETVGESSHQHVNQTENVNEEDEQLTARIVQGIAVGMQMIRNDPEKNFRIERLKALGATTFAGTT

Query:  DPYDAKLWMEMLEKCFNVMGCPKDRKVRLATFLLQ
        D  DA++W+ MLEKCF+VM CP++RKVRLATFLLQ
Subjt:  DPYDAKLWMEMLEKCFNVMGCPKDRKVRLATFLLQ

A0A5D3DES5 DNA/RNA polymerases superfamily protein2.8e-2147.69Show/hide
Query:  GIMPRGGRTRRLQDLETQQTSDGQNSVEEETVGESSHQHVNQTENVNEEDEQLTARIVQGIAVGMQMIRNDPEKNFRIERLKALGATTFAGTTDPYDAKL
        G MPR GR R+  D +T   +        E+  ESS  HV         +EQL  R+ Q +  G++  ++DPEK + IERLKALGATTF GTT+P DA+ 
Subjt:  GIMPRGGRTRRLQDLETQQTSDGQNSVEEETVGESSHQHVNQTENVNEEDEQLTARIVQGIAVGMQMIRNDPEKNFRIERLKALGATTFAGTTDPYDAKL

Query:  WMEMLEKCFNVMGCPKDRKVRLATFLLQGG
        W+ ++EKCF V  CP+DRKV LA+FLLQ G
Subjt:  WMEMLEKCFNVMGCPKDRKVRLATFLLQGG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCCAGTTCAGAGGCTCGAGTGGAGTGATCATGTCGGAGGTACCTAAGCGTCGCCGCATTAAGCGAAAGCGGTCGTATTCAGAGAGAGAGGAACAAGAGAAGAAGGA
AGCTGAAGAGAAGACGAGAGAAGAAGAAGCAAAAAGGGCTGAGGAAGAGATTCTGCCCAAGCGAAGAGAAGACAAGGGCAAAGGAATTGCTGAGGCATCGGGTGAGACTG
GCGAGATTGAGGAACCAAGTGATTTGCCCAGGTTCTTAGAGTCTGGAATAGCGAACCTTGGGTGGAGGCAGTTTTGTGCGAAACCAGAACCTGTCAATTCCAACATTGTT
CGGGAATTTTACGCTAATCTTGACGTTAAGGATGACTTTGAGGTTATAGTTCGAGGAGTGCCTGTACAGTGGAGCCCAGAAGCCATTAATGATTTGTTTAATCTCCAGGA
TTTTCCGCATGCAGTTTTTAATGAGATGATGGTTGCACCATCTAGCGACCAATTAAGTGCGGCTGTCGAGAGGCTACGCTTACTGCCGACAACTCACGACTCCACAGTAT
CTCGGGACAGGGTATTGCTTGCCTTTGCCATTCTTCGCTCGATGAGTATTGATGTAGGAAAAATAATTTCTTCTGAGATTGTTGATTGCTGGAAAAAGAAGAATCGTGAT
GCTGGTTTGAAGAGGGCGCTACAGGAGAATTTGTCAAAGTCATATCCAACCCTCCCTGTATTCCCCGAAGACTTACTGAACCCCTGGATTCCACCGCCGCCTGCTGAGAA
GGAAGATGAAGAGGAAGATTTAGTGGACATCACTAATCACGGTTGGAAACGGTTGTGCGCAAAGCCGGATCCCACTGTTGATCAACTAGAACGAGAGTTCTACGACAACA
TCGATGAAAATGAAGGATTCGTGGTTATTGTTCGTAGAGTTGTTGTCGATTGGAGCCTTGGAGGAATCATGCCTCGAGGTGGCAGAACGCGTAGGCTCCAGGACCTTGAA
ACTCAACAAACTTCTGATGGACAAAATTCAGTTGAAGAAGAAACCGTTGGTGAATCTAGTCACCAACATGTGAATCAAACTGAAAATGTAAATGAAGAAGATGAACAATT
GACGGCGAGAATTGTGCAAGGCATAGCAGTAGGGATGCAAATGATTAGAAATGACCCAGAGAAAAATTTTAGAATTGAGCGGCTAAAAGCTTTGGGTGCAACTACGTTTG
CTGGGACGACAGACCCATATGACGCTAAATTGTGGATGGAAATGTTGGAGAAATGTTTCAATGTCATGGGATGCCCTAAAGATAGAAAAGTACGACTAGCCACCTTCTTA
CTCCAAGGGGGGCAGATGACTGGTGGAAATCGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGCCAGTTCAGAGGCTCGAGTGGAGTGATCATGTCGGAGGTACCTAAGCGTCGCCGCATTAAGCGAAAGCGGTCGTATTCAGAGAGAGAGGAACAAGAGAAGAAGGA
AGCTGAAGAGAAGACGAGAGAAGAAGAAGCAAAAAGGGCTGAGGAAGAGATTCTGCCCAAGCGAAGAGAAGACAAGGGCAAAGGAATTGCTGAGGCATCGGGTGAGACTG
GCGAGATTGAGGAACCAAGTGATTTGCCCAGGTTCTTAGAGTCTGGAATAGCGAACCTTGGGTGGAGGCAGTTTTGTGCGAAACCAGAACCTGTCAATTCCAACATTGTT
CGGGAATTTTACGCTAATCTTGACGTTAAGGATGACTTTGAGGTTATAGTTCGAGGAGTGCCTGTACAGTGGAGCCCAGAAGCCATTAATGATTTGTTTAATCTCCAGGA
TTTTCCGCATGCAGTTTTTAATGAGATGATGGTTGCACCATCTAGCGACCAATTAAGTGCGGCTGTCGAGAGGCTACGCTTACTGCCGACAACTCACGACTCCACAGTAT
CTCGGGACAGGGTATTGCTTGCCTTTGCCATTCTTCGCTCGATGAGTATTGATGTAGGAAAAATAATTTCTTCTGAGATTGTTGATTGCTGGAAAAAGAAGAATCGTGAT
GCTGGTTTGAAGAGGGCGCTACAGGAGAATTTGTCAAAGTCATATCCAACCCTCCCTGTATTCCCCGAAGACTTACTGAACCCCTGGATTCCACCGCCGCCTGCTGAGAA
GGAAGATGAAGAGGAAGATTTAGTGGACATCACTAATCACGGTTGGAAACGGTTGTGCGCAAAGCCGGATCCCACTGTTGATCAACTAGAACGAGAGTTCTACGACAACA
TCGATGAAAATGAAGGATTCGTGGTTATTGTTCGTAGAGTTGTTGTCGATTGGAGCCTTGGAGGAATCATGCCTCGAGGTGGCAGAACGCGTAGGCTCCAGGACCTTGAA
ACTCAACAAACTTCTGATGGACAAAATTCAGTTGAAGAAGAAACCGTTGGTGAATCTAGTCACCAACATGTGAATCAAACTGAAAATGTAAATGAAGAAGATGAACAATT
GACGGCGAGAATTGTGCAAGGCATAGCAGTAGGGATGCAAATGATTAGAAATGACCCAGAGAAAAATTTTAGAATTGAGCGGCTAAAAGCTTTGGGTGCAACTACGTTTG
CTGGGACGACAGACCCATATGACGCTAAATTGTGGATGGAAATGTTGGAGAAATGTTTCAATGTCATGGGATGCCCTAAAGATAGAAAAGTACGACTAGCCACCTTCTTA
CTCCAAGGGGGGCAGATGACTGGTGGAAATCGTTGA
Protein sequenceShow/hide protein sequence
MSQFRGSSGVIMSEVPKRRRIKRKRSYSEREEQEKKEAEEKTREEEAKRAEEEILPKRREDKGKGIAEASGETGEIEEPSDLPRFLESGIANLGWRQFCAKPEPVNSNIV
REFYANLDVKDDFEVIVRGVPVQWSPEAINDLFNLQDFPHAVFNEMMVAPSSDQLSAAVERLRLLPTTHDSTVSRDRVLLAFAILRSMSIDVGKIISSEIVDCWKKKNRD
AGLKRALQENLSKSYPTLPVFPEDLLNPWIPPPPAEKEDEEEDLVDITNHGWKRLCAKPDPTVDQLEREFYDNIDENEGFVVIVRRVVVDWSLGGIMPRGGRTRRLQDLE
TQQTSDGQNSVEEETVGESSHQHVNQTENVNEEDEQLTARIVQGIAVGMQMIRNDPEKNFRIERLKALGATTFAGTTDPYDAKLWMEMLEKCFNVMGCPKDRKVRLATFL
LQGGQMTGGNR