; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0018610 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0018610
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotran_gag_3 domain-containing protein
Genome locationchr5:30692543..30698790
RNA-Seq ExpressionLag0018610
SyntenyLag0018610
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049700.1 T4.5 [Cucumis melo var. makuwa]4.3e-4055.45Show/hide
Query:  SSETTNSQRSAGDGLDP---LAHMDNLHCLGQDS-------FRLQSILKAHKLFGLIVGSIVCPPKTIFASTSSSSTSADPPPTPALAPVPPQINLLYED
        SS T  S  +  D L P   L+++ NL  +  DS       F+L +ILKAHKL+G I G+  CPP+T     +SSSTS           VPPQ N  YED
Subjt:  SSETTNSQRSAGDGLDP---LAHMDNLHCLGQDS-------FRLQSILKAHKLFGLIVGSIVCPPKTIFASTSSSSTSADPPPTPALAPVPPQINLLYED

Query:  WIAKDHALMTPINTTLSLAALAYVVGCTSSKQAWEVLEKHYSSSSRTNIVNLKSDLQSISKKLGESIDDYIKRIKELKDKLANVSVIVDGEDIFTYYRVN
        WIAKD ALMT IN TLS  ALAYVVG TSSKQ W+VL K YSS SR+N+VNLKSDLQ+I KK  ESID YIKRIKE+KDKLANVS  ++ ED+   Y +N
Subjt:  WIAKDHALMTPINTTLSLAALAYVVGCTSSKQAWEVLEKHYSSSSRTNIVNLKSDLQSISKKLGESIDDYIKRIKELKDKLANVSVIVDGEDIFTYYRVN

Query:  GV
        G+
Subjt:  GV

KAE8645659.1 hypothetical protein Csa_020439 [Cucumis sativus]2.1e-3954.95Show/hide
Query:  SSETTNSQRSAGDGLDP---LAHMDNLHCLGQDS-------FRLQSILKAHKLFGLIVGSIVCPPKTIFASTSSSSTSADPPPTPALAPVPPQINLLYED
        SS T  S  +  D L P   L+++ NL  +  DS       F+L +ILKAHKLFG + G+  CP       TS S+TS           VPPQ N LYED
Subjt:  SSETTNSQRSAGDGLDP---LAHMDNLHCLGQDS-------FRLQSILKAHKLFGLIVGSIVCPPKTIFASTSSSSTSADPPPTPALAPVPPQINLLYED

Query:  WIAKDHALMTPINTTLSLAALAYVVGCTSSKQAWEVLEKHYSSSSRTNIVNLKSDLQSISKKLGESIDDYIKRIKELKDKLANVSVIVDGEDIFTYYRVN
        WIAKD ALMT IN TLS  ALAYVVG TSSKQ W+VL K YSS SR+N+VNLKSDLQ+I KK  ESID YIKRIKE+KDKLANVS  ++ ED+   Y +N
Subjt:  WIAKDHALMTPINTTLSLAALAYVVGCTSSKQAWEVLEKHYSSSSRTNIVNLKSDLQSISKKLGESIDDYIKRIKELKDKLANVSVIVDGEDIFTYYRVN

Query:  GV
        G+
Subjt:  GV

XP_008448007.1 PREDICTED: uncharacterized protein LOC103490319 isoform X2 [Cucumis melo]4.3e-4055.45Show/hide
Query:  SSETTNSQRSAGDGLDP---LAHMDNLHCLGQDS-------FRLQSILKAHKLFGLIVGSIVCPPKTIFASTSSSSTSADPPPTPALAPVPPQINLLYED
        SS T  S  +  D L P   L+++ NL  +  DS       F+L +ILKAHKL+G I G+  CPP+T     +SSSTS           VPPQ N  YED
Subjt:  SSETTNSQRSAGDGLDP---LAHMDNLHCLGQDS-------FRLQSILKAHKLFGLIVGSIVCPPKTIFASTSSSSTSADPPPTPALAPVPPQINLLYED

Query:  WIAKDHALMTPINTTLSLAALAYVVGCTSSKQAWEVLEKHYSSSSRTNIVNLKSDLQSISKKLGESIDDYIKRIKELKDKLANVSVIVDGEDIFTYYRVN
        WIAKD ALMT IN TLS  ALAYVVG TSSKQ W+VL K YSS SR+N+VNLKSDLQ+I KK  ESID YIKRIKE+KDKLANVS  ++ ED+   Y +N
Subjt:  WIAKDHALMTPINTTLSLAALAYVVGCTSSKQAWEVLEKHYSSSSRTNIVNLKSDLQSISKKLGESIDDYIKRIKELKDKLANVSVIVDGEDIFTYYRVN

Query:  GV
        G+
Subjt:  GV

XP_008448008.1 PREDICTED: uncharacterized protein LOC103490319 isoform X3 [Cucumis melo]4.3e-4055.45Show/hide
Query:  SSETTNSQRSAGDGLDP---LAHMDNLHCLGQDS-------FRLQSILKAHKLFGLIVGSIVCPPKTIFASTSSSSTSADPPPTPALAPVPPQINLLYED
        SS T  S  +  D L P   L+++ NL  +  DS       F+L +ILKAHKL+G I G+  CPP+T     +SSSTS           VPPQ N  YED
Subjt:  SSETTNSQRSAGDGLDP---LAHMDNLHCLGQDS-------FRLQSILKAHKLFGLIVGSIVCPPKTIFASTSSSSTSADPPPTPALAPVPPQINLLYED

Query:  WIAKDHALMTPINTTLSLAALAYVVGCTSSKQAWEVLEKHYSSSSRTNIVNLKSDLQSISKKLGESIDDYIKRIKELKDKLANVSVIVDGEDIFTYYRVN
        WIAKD ALMT IN TLS  ALAYVVG TSSKQ W+VL K YSS SR+N+VNLKSDLQ+I KK  ESID YIKRIKE+KDKLANVS  ++ ED+   Y +N
Subjt:  WIAKDHALMTPINTTLSLAALAYVVGCTSSKQAWEVLEKHYSSSSRTNIVNLKSDLQSISKKLGESIDDYIKRIKELKDKLANVSVIVDGEDIFTYYRVN

Query:  GV
        G+
Subjt:  GV

XP_016900446.1 PREDICTED: uncharacterized protein LOC103490319 isoform X1 [Cucumis melo]4.3e-4055.45Show/hide
Query:  SSETTNSQRSAGDGLDP---LAHMDNLHCLGQDS-------FRLQSILKAHKLFGLIVGSIVCPPKTIFASTSSSSTSADPPPTPALAPVPPQINLLYED
        SS T  S  +  D L P   L+++ NL  +  DS       F+L +ILKAHKL+G I G+  CPP+T     +SSSTS           VPPQ N  YED
Subjt:  SSETTNSQRSAGDGLDP---LAHMDNLHCLGQDS-------FRLQSILKAHKLFGLIVGSIVCPPKTIFASTSSSSTSADPPPTPALAPVPPQINLLYED

Query:  WIAKDHALMTPINTTLSLAALAYVVGCTSSKQAWEVLEKHYSSSSRTNIVNLKSDLQSISKKLGESIDDYIKRIKELKDKLANVSVIVDGEDIFTYYRVN
        WIAKD ALMT IN TLS  ALAYVVG TSSKQ W+VL K YSS SR+N+VNLKSDLQ+I KK  ESID YIKRIKE+KDKLANVS  ++ ED+   Y +N
Subjt:  WIAKDHALMTPINTTLSLAALAYVVGCTSSKQAWEVLEKHYSSSSRTNIVNLKSDLQSISKKLGESIDDYIKRIKELKDKLANVSVIVDGEDIFTYYRVN

Query:  GV
        G+
Subjt:  GV

TrEMBL top hitse value%identityAlignment
A0A1S3BI58 uncharacterized protein LOC103490319 isoform X22.1e-4055.45Show/hide
Query:  SSETTNSQRSAGDGLDP---LAHMDNLHCLGQDS-------FRLQSILKAHKLFGLIVGSIVCPPKTIFASTSSSSTSADPPPTPALAPVPPQINLLYED
        SS T  S  +  D L P   L+++ NL  +  DS       F+L +ILKAHKL+G I G+  CPP+T     +SSSTS           VPPQ N  YED
Subjt:  SSETTNSQRSAGDGLDP---LAHMDNLHCLGQDS-------FRLQSILKAHKLFGLIVGSIVCPPKTIFASTSSSSTSADPPPTPALAPVPPQINLLYED

Query:  WIAKDHALMTPINTTLSLAALAYVVGCTSSKQAWEVLEKHYSSSSRTNIVNLKSDLQSISKKLGESIDDYIKRIKELKDKLANVSVIVDGEDIFTYYRVN
        WIAKD ALMT IN TLS  ALAYVVG TSSKQ W+VL K YSS SR+N+VNLKSDLQ+I KK  ESID YIKRIKE+KDKLANVS  ++ ED+   Y +N
Subjt:  WIAKDHALMTPINTTLSLAALAYVVGCTSSKQAWEVLEKHYSSSSRTNIVNLKSDLQSISKKLGESIDDYIKRIKELKDKLANVSVIVDGEDIFTYYRVN

Query:  GV
        G+
Subjt:  GV

A0A1S3BIR3 uncharacterized protein LOC103490319 isoform X32.1e-4055.45Show/hide
Query:  SSETTNSQRSAGDGLDP---LAHMDNLHCLGQDS-------FRLQSILKAHKLFGLIVGSIVCPPKTIFASTSSSSTSADPPPTPALAPVPPQINLLYED
        SS T  S  +  D L P   L+++ NL  +  DS       F+L +ILKAHKL+G I G+  CPP+T     +SSSTS           VPPQ N  YED
Subjt:  SSETTNSQRSAGDGLDP---LAHMDNLHCLGQDS-------FRLQSILKAHKLFGLIVGSIVCPPKTIFASTSSSSTSADPPPTPALAPVPPQINLLYED

Query:  WIAKDHALMTPINTTLSLAALAYVVGCTSSKQAWEVLEKHYSSSSRTNIVNLKSDLQSISKKLGESIDDYIKRIKELKDKLANVSVIVDGEDIFTYYRVN
        WIAKD ALMT IN TLS  ALAYVVG TSSKQ W+VL K YSS SR+N+VNLKSDLQ+I KK  ESID YIKRIKE+KDKLANVS  ++ ED+   Y +N
Subjt:  WIAKDHALMTPINTTLSLAALAYVVGCTSSKQAWEVLEKHYSSSSRTNIVNLKSDLQSISKKLGESIDDYIKRIKELKDKLANVSVIVDGEDIFTYYRVN

Query:  GV
        G+
Subjt:  GV

A0A1S4DWT9 uncharacterized protein LOC103490319 isoform X12.1e-4055.45Show/hide
Query:  SSETTNSQRSAGDGLDP---LAHMDNLHCLGQDS-------FRLQSILKAHKLFGLIVGSIVCPPKTIFASTSSSSTSADPPPTPALAPVPPQINLLYED
        SS T  S  +  D L P   L+++ NL  +  DS       F+L +ILKAHKL+G I G+  CPP+T     +SSSTS           VPPQ N  YED
Subjt:  SSETTNSQRSAGDGLDP---LAHMDNLHCLGQDS-------FRLQSILKAHKLFGLIVGSIVCPPKTIFASTSSSSTSADPPPTPALAPVPPQINLLYED

Query:  WIAKDHALMTPINTTLSLAALAYVVGCTSSKQAWEVLEKHYSSSSRTNIVNLKSDLQSISKKLGESIDDYIKRIKELKDKLANVSVIVDGEDIFTYYRVN
        WIAKD ALMT IN TLS  ALAYVVG TSSKQ W+VL K YSS SR+N+VNLKSDLQ+I KK  ESID YIKRIKE+KDKLANVS  ++ ED+   Y +N
Subjt:  WIAKDHALMTPINTTLSLAALAYVVGCTSSKQAWEVLEKHYSSSSRTNIVNLKSDLQSISKKLGESIDDYIKRIKELKDKLANVSVIVDGEDIFTYYRVN

Query:  GV
        G+
Subjt:  GV

A0A5D3CLI6 T4.52.1e-4055.45Show/hide
Query:  SSETTNSQRSAGDGLDP---LAHMDNLHCLGQDS-------FRLQSILKAHKLFGLIVGSIVCPPKTIFASTSSSSTSADPPPTPALAPVPPQINLLYED
        SS T  S  +  D L P   L+++ NL  +  DS       F+L +ILKAHKL+G I G+  CPP+T     +SSSTS           VPPQ N  YED
Subjt:  SSETTNSQRSAGDGLDP---LAHMDNLHCLGQDS-------FRLQSILKAHKLFGLIVGSIVCPPKTIFASTSSSSTSADPPPTPALAPVPPQINLLYED

Query:  WIAKDHALMTPINTTLSLAALAYVVGCTSSKQAWEVLEKHYSSSSRTNIVNLKSDLQSISKKLGESIDDYIKRIKELKDKLANVSVIVDGEDIFTYYRVN
        WIAKD ALMT IN TLS  ALAYVVG TSSKQ W+VL K YSS SR+N+VNLKSDLQ+I KK  ESID YIKRIKE+KDKLANVS  ++ ED+   Y +N
Subjt:  WIAKDHALMTPINTTLSLAALAYVVGCTSSKQAWEVLEKHYSSSSRTNIVNLKSDLQSISKKLGESIDDYIKRIKELKDKLANVSVIVDGEDIFTYYRVN

Query:  GV
        G+
Subjt:  GV

A0A6J1DYF1 uncharacterized protein LOC1110257096.7e-3959.01Show/hide
Query:  FRLQSILKAHKLFGLIVGSIVCPPKTIFASTSSSSTSADPPPTPALAPVPPQINLLYEDWIAKDHALMTPINTTLSLAALAYVVGCTSSKQAWEVLEKHY
        F+L +ILKAHKL+G I GS   P K + +S+ S S+++            P +N  + DWIAKDHALMT +N TLS +ALAY+VGC SS+Q W+ L K+Y
Subjt:  FRLQSILKAHKLFGLIVGSIVCPPKTIFASTSSSSTSADPPPTPALAPVPPQINLLYEDWIAKDHALMTPINTTLSLAALAYVVGCTSSKQAWEVLEKHY

Query:  SSSSRTNIVNLKSDLQSISKKLGESIDDYIKRIKELKDKLANVSVIVDGEDIFTYYRVNGV
        SSSSRTN+VNLKS+LQSISKK GESID Y++RIKELKDKLANVSV+VD ED+   Y +NG+
Subjt:  SSSSRTNIVNLKSDLQSISKKLGESIDDYIKRIKELKDKLANVSVIVDGEDIFTYYRVNGV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCGGGATGCGAAAAGAGGCCAAAGGAACGAAGAGAATTGAAGTTGGAAGCTATTGGAGTGTGCAATCTGCAGACCAGCGTCGAGACCCTTGGTTCTGGGAGTCTCG
ACGCTGTCAGAGGTTGCCAGTGGCAGTTGATCGGCGGAGGTCAGCGGCGACCGGTAGTCGGAGGTCGACTGTGGCGATCGATAGTCAGAGTTCGAAGGTGGCGGACGTGA
CCTCCGATGGCGGCGATGATGGTGGCCTGTCAGCGGAGGCCTGTAGTCGGAGGTCGACAGTAGAGGTCGGTCGGTGGTGGTCGGTCGATGCAGGTCGACGAAGATCGGTA
GTAGGGGTGGACTGTGGCGGTCGGTCGGTGGAGGTCGATGCTAACAGTCGGCTGTGCCCGGTATTCAGAGGTCGACGATGGCGACCGGTCAACGGAGGTCGACGATGGCG
ACCAGTCAATGGAGGTCAGGAACAACCGGTAGTCGGAGGTCGACCGAAGTCGGCGATGACCGATAGTCAGAGGTTGACGATAGCGGTTGGTCGGTGGAGGTCAGCAGCGA
CAGATAGTCGGAGGTCAACGATGGCGGTCGATAGGTGGAGTTCAGAAACAACCAATAGTCAGAGATCGGCGGGGGACGGATTGGACCCTTTAGCTCACATGGACAATTTA
CATTGTTTGGGACAAGATTCATTTAGATTGCAATCGATTTTGAAGGCGCATAAACTCTTTGGGCTTATTGTTGGCTCCATTGTTTGCCCACCCAAGACCATCTTTGCATC
GACTTCTTCGTCTTCAACCTCGGCCGACCCACCACCCACCCCTGCTCTTGCTCCAGTTCCGCCTCAAATAAATCTTCTCTATGAGGATTGGATTGCCAAAGATCACGCTC
TCATGACTCCGATTAACACCACACTCTCTCTAGCAGCGTTGGCTTATGTCGTTGGTTGCACCTCGTCGAAGCAAGCTTGGGAGGTTCTCGAGAAGCACTACTCTTCAAGC
TCGAGGACAAACATTGTAAATCTGAAATCGGATCTTCAATCCATCTCAAAGAAGCTAGGTGAGTCCATTGATGATTATATTAAACGTATTAAGGAACTTAAAGACAAGTT
AGCTAATGTTTCAGTCATTGTTGATGGGGAGGATATCTTCACCTATTATAGGGTTAATGGTGTGAGGGTTGCAAGTGACGAGGATAACTTCGAGAATATAACACGTTTCC
GCCACCGACGACGAAGCATAGATATTAATAAGCGCAAGCGAATTACTCGTCAAATGCGCAACTCTAACAATGTGGCGTCGGACCTTCTCCTTGACATTGACTCCATGAAC
AGCCCGCCCACCAAATCCATCCATACAGGTTTCTTCATCGGCCAGAGCAGAGCTGACCCACGTCTCAATGTCACTAATCAGAGCCCCGAAATCGTACCCTCGAGGCCGAC
CCAATTCTCGAATGGTCGTTTGGAGCTCGAACACCGAGTCACCGACCTCCTCCACGCAGTCGAAGATCGTCGACGCCTCTCTCCGCTGCAGTCCGTGGGTTCAGGCGAGC
TGTCTAATTTGCCGCCGCGCGAGGATCGGACGGCGGCGAGGTTGACGTGGAGGGCGGCAAGGGCCAGCGTCTTGGTGGTTGTCTTGATCTTGCCGGCGTACACCAACAAC
GAATTTTGGGATTTGGGAACTCTCGTGGCGGCGGCGGCGGTGAGGAGGAGGAAGAGAAGGAGGAGTGTTTGGATGAAAGGGAAATGGGAATTTTCCATTTTTGTTGGTGT
GGATCTGGGAGTGAGGGAAAATGAAGATCCGGAGAAATAG
mRNA sequenceShow/hide mRNA sequence
ATGTTCGGGATGCGAAAAGAGGCCAAAGGAACGAAGAGAATTGAAGTTGGAAGCTATTGGAGTGTGCAATCTGCAGACCAGCGTCGAGACCCTTGGTTCTGGGAGTCTCG
ACGCTGTCAGAGGTTGCCAGTGGCAGTTGATCGGCGGAGGTCAGCGGCGACCGGTAGTCGGAGGTCGACTGTGGCGATCGATAGTCAGAGTTCGAAGGTGGCGGACGTGA
CCTCCGATGGCGGCGATGATGGTGGCCTGTCAGCGGAGGCCTGTAGTCGGAGGTCGACAGTAGAGGTCGGTCGGTGGTGGTCGGTCGATGCAGGTCGACGAAGATCGGTA
GTAGGGGTGGACTGTGGCGGTCGGTCGGTGGAGGTCGATGCTAACAGTCGGCTGTGCCCGGTATTCAGAGGTCGACGATGGCGACCGGTCAACGGAGGTCGACGATGGCG
ACCAGTCAATGGAGGTCAGGAACAACCGGTAGTCGGAGGTCGACCGAAGTCGGCGATGACCGATAGTCAGAGGTTGACGATAGCGGTTGGTCGGTGGAGGTCAGCAGCGA
CAGATAGTCGGAGGTCAACGATGGCGGTCGATAGGTGGAGTTCAGAAACAACCAATAGTCAGAGATCGGCGGGGGACGGATTGGACCCTTTAGCTCACATGGACAATTTA
CATTGTTTGGGACAAGATTCATTTAGATTGCAATCGATTTTGAAGGCGCATAAACTCTTTGGGCTTATTGTTGGCTCCATTGTTTGCCCACCCAAGACCATCTTTGCATC
GACTTCTTCGTCTTCAACCTCGGCCGACCCACCACCCACCCCTGCTCTTGCTCCAGTTCCGCCTCAAATAAATCTTCTCTATGAGGATTGGATTGCCAAAGATCACGCTC
TCATGACTCCGATTAACACCACACTCTCTCTAGCAGCGTTGGCTTATGTCGTTGGTTGCACCTCGTCGAAGCAAGCTTGGGAGGTTCTCGAGAAGCACTACTCTTCAAGC
TCGAGGACAAACATTGTAAATCTGAAATCGGATCTTCAATCCATCTCAAAGAAGCTAGGTGAGTCCATTGATGATTATATTAAACGTATTAAGGAACTTAAAGACAAGTT
AGCTAATGTTTCAGTCATTGTTGATGGGGAGGATATCTTCACCTATTATAGGGTTAATGGTGTGAGGGTTGCAAGTGACGAGGATAACTTCGAGAATATAACACGTTTCC
GCCACCGACGACGAAGCATAGATATTAATAAGCGCAAGCGAATTACTCGTCAAATGCGCAACTCTAACAATGTGGCGTCGGACCTTCTCCTTGACATTGACTCCATGAAC
AGCCCGCCCACCAAATCCATCCATACAGGTTTCTTCATCGGCCAGAGCAGAGCTGACCCACGTCTCAATGTCACTAATCAGAGCCCCGAAATCGTACCCTCGAGGCCGAC
CCAATTCTCGAATGGTCGTTTGGAGCTCGAACACCGAGTCACCGACCTCCTCCACGCAGTCGAAGATCGTCGACGCCTCTCTCCGCTGCAGTCCGTGGGTTCAGGCGAGC
TGTCTAATTTGCCGCCGCGCGAGGATCGGACGGCGGCGAGGTTGACGTGGAGGGCGGCAAGGGCCAGCGTCTTGGTGGTTGTCTTGATCTTGCCGGCGTACACCAACAAC
GAATTTTGGGATTTGGGAACTCTCGTGGCGGCGGCGGCGGTGAGGAGGAGGAAGAGAAGGAGGAGTGTTTGGATGAAAGGGAAATGGGAATTTTCCATTTTTGTTGGTGT
GGATCTGGGAGTGAGGGAAAATGAAGATCCGGAGAAATAG
Protein sequenceShow/hide protein sequence
MFGMRKEAKGTKRIEVGSYWSVQSADQRRDPWFWESRRCQRLPVAVDRRRSAATGSRRSTVAIDSQSSKVADVTSDGGDDGGLSAEACSRRSTVEVGRWWSVDAGRRRSV
VGVDCGGRSVEVDANSRLCPVFRGRRWRPVNGGRRWRPVNGGQEQPVVGGRPKSAMTDSQRLTIAVGRWRSAATDSRRSTMAVDRWSSETTNSQRSAGDGLDPLAHMDNL
HCLGQDSFRLQSILKAHKLFGLIVGSIVCPPKTIFASTSSSSTSADPPPTPALAPVPPQINLLYEDWIAKDHALMTPINTTLSLAALAYVVGCTSSKQAWEVLEKHYSSS
SRTNIVNLKSDLQSISKKLGESIDDYIKRIKELKDKLANVSVIVDGEDIFTYYRVNGVRVASDEDNFENITRFRHRRRSIDINKRKRITRQMRNSNNVASDLLLDIDSMN
SPPTKSIHTGFFIGQSRADPRLNVTNQSPEIVPSRPTQFSNGRLELEHRVTDLLHAVEDRRRLSPLQSVGSGELSNLPPREDRTAARLTWRAARASVLVVVLILPAYTNN
EFWDLGTLVAAAAVRRRKRRRSVWMKGKWEFSIFVGVDLGVRENEDPEK