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Lag0018613 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0018613
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionProtein PALE CRESS
Genome locationchr5:30829945..30837917
RNA-Seq ExpressionLag0018613
SyntenyLag0018613
Gene Ontology termsGO:0009658 - chloroplast organization (biological process)
GO:0010239 - chloroplast mRNA processing (biological process)
GO:0048366 - leaf development (biological process)
GO:0009507 - chloroplast (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF3793041.1 PALE CRESS protein [Nymphaea thermarum]8.0e-0433.06Show/hide
Query:  LRRLMYPVETISTLGRICAEKIEEVVEKGELIELVVLVIWNQLDLARRDEVKWISEAAS---QRGSLAPLRKVKQVLDNLVIDLCNSMHSFSSKLFL---
        +R+    V +    G    EKIEE  EKGEL ELV++VIWN+LDLARRDE K   ++     +R     L+        L+ DL N    F+ + +L   
Subjt:  LRRLMYPVETISTLGRICAEKIEEVVEKGELIELVVLVIWNQLDLARRDEVKWISEAAS---QRGSLAPLRKVKQVLDNLVIDLCNSMHSFSSKLFL---

Query:  ----MQSMPSIAPLTSTTRLGADV
            + + P   P +    +G D+
Subjt:  ----MQSMPSIAPLTSTTRLGADV
XP_031500331.1 protein PALE CRESS, chloroplastic [Nymphaea colorata]8.0e-0455.77Show/hide
Query:  LRRLMYPVETISTLGRICAEKIEEVVEKGELIELVVLVIWNQLDLARRDEVK
        +R+    V +    G    EKIEE  EKGEL ELV++VIWN+LDLARRDE K
Subjt:  LRRLMYPVETISTLGRICAEKIEEVVEKGELIELVVLVIWNQLDLARRDEVK
TrEMBL top hitse value%identityAlignment
A0A427BAU0 Uncharacterized protein5.1e-0464.1Show/hide
Query:  ISTLGRICAEKIEEVVEKGELIELVVLVIWNQLDLARRD
        IS +   C +KIEE  EKGEL ELV++VIWN+LDLAR+D
Subjt:  ISTLGRICAEKIEEVVEKGELIELVVLVIWNQLDLARRD
A0A438KHQ9 Protein PALE CRESS, chloroplastic6.6e-0469.44Show/hide
Query:  ICAEKIEEVVEKGELIELVVLVIWNQLDLARRDEVK
        +C  KIEE  EKGEL ELV++VIWN+LDLARRD+ K
Subjt:  ICAEKIEEVVEKGELIELVVLVIWNQLDLARRDEVK
A0A444EBZ5 Uncharacterized protein5.1e-0464.1Show/hide
Query:  ISTLGRICAEKIEEVVEKGELIELVVLVIWNQLDLARRD
        IS +   C +KIEE  EKGEL ELV++VIWN+LDLAR+D
Subjt:  ISTLGRICAEKIEEVVEKGELIELVVLVIWNQLDLARRD
A0A5N5FV65 Protein PALE CRESS6.6e-0441.25Show/hide
Query:  EKIEEVVEKGELIELVVLVIWNQLDLARRDEVKWISEAAS---QRGSLAPLRKVKQVLDNLVIDLCNSMHSFSSKLFLMQ
        EKIEE  EKGEL ELV++VIWN+LDLARRD+ K +  +     +R     L++       L+ DL N    F  +++L +
Subjt:  EKIEEVVEKGELIELVVLVIWNQLDLARRDEVKWISEAAS---QRGSLAPLRKVKQVLDNLVIDLCNSMHSFSSKLFLMQ
A0A7J6E8T2 Uncharacterized protein8.6e-0442.5Show/hide
Query:  EKIEEVVEKGELIELVVLVIWNQLDLARRDEVKWISEAAS---QRGSLAPLRKVKQVLDNLVIDLCNSMHSFSSKLFLMQ
        EKIEE  EKGEL ELV++VIWN+LDLARRDE K    +     +R     L++       L+ DL N    F  +++L +
Subjt:  EKIEEVVEKGELIELVVLVIWNQLDLARRDEVKWISEAAS---QRGSLAPLRKVKQVLDNLVIDLCNSMHSFSSKLFLMQ
SwissProt top hitse value%identityAlignment
Q39089 Protein PALE CRESS, chloroplastic3.4e-0569.7Show/hide
Query:  EKIEEVVEKGELIELVVLVIWNQLDLARRDEVK
        E+IEE  EKGEL ELV+++IWN+LDLARRD+ K
Subjt:  EKIEEVVEKGELIELVVLVIWNQLDLARRDEVK
Arabidopsis top hitse value%identityAlignment
AT2G48120.1 pale cress protein (PAC)2.4e-0669.7Show/hide
Query:  EKIEEVVEKGELIELVVLVIWNQLDLARRDEVK
        E+IEE  EKGEL ELV+++IWN+LDLARRD+ K
Subjt:  EKIEEVVEKGELIELVVLVIWNQLDLARRDEVK
AT2G48120.2 pale cress protein (PAC)2.4e-0669.7Show/hide
Query:  EKIEEVVEKGELIELVVLVIWNQLDLARRDEVK
        E+IEE  EKGEL ELV+++IWN+LDLARRD+ K
Subjt:  EKIEEVVEKGELIELVVLVIWNQLDLARRDEVK
AT5G50780.1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein6.5e-0464.1Show/hide
Query:  TSTTRLGADVIVFSHCCGKYGKS---SVAAKSGFFLKLT
        TST RLGADVIVFS C GK GKS   S+   S  FLK T
Subjt:  TSTTRLGADVIVFSHCCGKYGKS---SVAAKSGFFLKLT

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGACTTTGCGTAGACTCATGTATCCAGTAGAGACTATTTCAACTCTTGGTAGGATTTGTGCTGAGAAAATTGAGGAAGTTGTTGAGAAAGGAGAACTAATAGAGCT
TGTTGTATTAGTGATATGGAATCAACTTGATTTAGCACGTCGTGATGAAGTTAAATGGATTTCTGAAGCAGCATCTCAGAGAGGGAGCCTTGCACCATTAAGAAAAGTAA
AACAGGTCCTTGATAACCTTGTGATCGATTTATGTAACTCCATGCACTCTTTCTCCTCAAAATTATTTCTGATGCAATCCATGCCTTCTATTGCTCCCCTGACTAGTACT
ACGAGACTTGGAGCAGATGTAATTGTGTTCTCACATTGTTGTGGCAAATATGGAAAAAGCTCAGTTGCAGCCAAATCAGGTTTTTTTCTCAAATTAACACATCTCTATAA
TGATGAATATAGTGGAAGTTTTCATTTGCTGGTTGAAACAAAGGAAGAAACTGGAGCGCTCAATTCTTTTGGACCCATGAAGGGATTGTTGACTGAGTTGCTCAAAGAAG
TCCTTCTTGGGCCAATCAGAGAGTTGGGCTCTTTGTTCAAGTTTCGCAGACACCCTTTAAGGGAACACTCATCTACTTACCCTAGAGGCGTGTTGTTATGTTTTCAACTC
CCTGTTCGGTCTTGTCCCCAAAATGGTAGACTTATTGAGTTGGCGATTTGGCCACTCTCACCCATACAAATCAAAGGGCAATCCCTTGTGGACAGGAATCCATGA
mRNA sequenceShow/hide mRNA sequence
ATGGGGACTTTGCGTAGACTCATGTATCCAGTAGAGACTATTTCAACTCTTGGTAGGATTTGTGCTGAGAAAATTGAGGAAGTTGTTGAGAAAGGAGAACTAATAGAGCT
TGTTGTATTAGTGATATGGAATCAACTTGATTTAGCACGTCGTGATGAAGTTAAATGGATTTCTGAAGCAGCATCTCAGAGAGGGAGCCTTGCACCATTAAGAAAAGTAA
AACAGGTCCTTGATAACCTTGTGATCGATTTATGTAACTCCATGCACTCTTTCTCCTCAAAATTATTTCTGATGCAATCCATGCCTTCTATTGCTCCCCTGACTAGTACT
ACGAGACTTGGAGCAGATGTAATTGTGTTCTCACATTGTTGTGGCAAATATGGAAAAAGCTCAGTTGCAGCCAAATCAGGTTTTTTTCTCAAATTAACACATCTCTATAA
TGATGAATATAGTGGAAGTTTTCATTTGCTGGTTGAAACAAAGGAAGAAACTGGAGCGCTCAATTCTTTTGGACCCATGAAGGGATTGTTGACTGAGTTGCTCAAAGAAG
TCCTTCTTGGGCCAATCAGAGAGTTGGGCTCTTTGTTCAAGTTTCGCAGACACCCTTTAAGGGAACACTCATCTACTTACCCTAGAGGCGTGTTGTTATGTTTTCAACTC
CCTGTTCGGTCTTGTCCCCAAAATGGTAGACTTATTGAGTTGGCGATTTGGCCACTCTCACCCATACAAATCAAAGGGCAATCCCTTGTGGACAGGAATCCATGA
Protein sequenceShow/hide protein sequence
MGTLRRLMYPVETISTLGRICAEKIEEVVEKGELIELVVLVIWNQLDLARRDEVKWISEAASQRGSLAPLRKVKQVLDNLVIDLCNSMHSFSSKLFLMQSMPSIAPLTST
TRLGADVIVFSHCCGKYGKSSVAAKSGFFLKLTHLYNDEYSGSFHLLVETKEETGALNSFGPMKGLLTELLKEVLLGPIRELGSLFKFRRHPLREHSSTYPRGVLLCFQL
PVRSCPQNGRLIELAIWPLSPIQIKGQSLVDRNP