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Lag0018622 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0018622
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase
Genome locationchr5:31021561..31022383
RNA-Seq ExpressionLag0018622
SyntenyLag0018622
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7947748.1 hypothetical protein I3843_14G109500 [Carya illinoinensis]4.3e-1556.34Show/hide
Query:  FEQMEEEQLYEAWERYNSMLRKCPQHGYPDWFQVQLFYKGLSRDFKTILDTAVGGNFLAKTVRDARALVEE
        F+Q + E LYEAWERY  ++R+CPQHG PDW QVQ+FY GL+   +TI+D A GG  ++KT   A AL+EE
Subjt:  FEQMEEEQLYEAWERYNSMLRKCPQHGYPDWFQVQLFYKGLSRDFKTILDTAVGGNFLAKTVRDARALVEE

WP_217833153.1 retrotransposon gag domain-containing protein, partial [Synechococcus sp. PCC 7002]3.6e-1755.41Show/hide
Query:  FEQMEEEQLYEAWERYNSMLRKCPQHGYPDWFQVQLFYKGLSRDFKTILDTAVGGNFLAKTVRDARALVEESLT
        F Q+E+EQLYEAWERY  +LR+CPQHGYPDW Q+QLFY GL+   K+ILD   GG+  +K  ++A  ++E+  T
Subjt:  FEQMEEEQLYEAWERYNSMLRKCPQHGYPDWFQVQLFYKGLSRDFKTILDTAVGGNFLAKTVRDARALVEESLT

WP_217860865.1 retrotransposon gag domain-containing protein, partial [Synechococcus sp. PCC 7002]1.1e-1554.93Show/hide
Query:  FEQMEEEQLYEAWERYNSMLRKCPQHGYPDWFQVQLFYKGLSRDFKTILDTAVGGNFLAKTVRDARALVEE
        F Q+E+EQLYEAWERY  +LR+CPQHGYPDW Q+QLFY GL    K+ILD    G+  +K  ++A  ++E+
Subjt:  FEQMEEEQLYEAWERYNSMLRKCPQHGYPDWFQVQLFYKGLSRDFKTILDTAVGGNFLAKTVRDARALVEE

XP_024931584.1 uncharacterized protein LOC107421998 [Ziziphus jujuba]2.7e-1729.8Show/hide
Query:  FEQMEEEQLYEAWERYNSMLRKCPQHGYPDWFQVQLFYKGLSRDFKTILDTAVGGNFLAKTVRDARALVEESLTIEALTKALNKLSG-SEIPSVPKVELK
        F Q ++E LY+AWER+  +LR+CP HG+P W QVQ+FY GL    K ++D A GG+ + K   +A  L+EE         +  +L+G S++ +V  V++ 
Subjt:  FEQMEEEQLYEAWERYNSMLRKCPQHGYPDWFQVQLFYKGLSRDFKTILDTAVGGNFLAKTVRDARALVEESLTIEALTKALNKLSG-SEIPSVPKVELK

Query:  MESQPEEVVHQEKKNPSEDTLGKFSEEIKNLMQAIVERDLFISKMEAKLDLLMNQIQ--QEKLSNVVAMDTQEQCLDISLRSGKQEVERKEVKQTSIKRI
                   +  N     +G+  +++ N  Q    +   I  +E ++  L  Q Q  Q  L +    + +EQ   I+LRSGKQ V  KE  +  +  I
Subjt:  MESQPEEVVHQEKKNPSEDTLGKFSEEIKNLMQAIVERDLFISKMEAKLDLLMNQIQ--QEKLSNVVAMDTQEQCLDISLRSGKQEVERKEVKQTSIKRI

Query:  LDEDDDQNIEEEEKAPLVPLEKTFHEFVDHSSGYCMIPHTPLPRK
        LD++D+++          P++ T H  V H +    + H    R+
Subjt:  LDEDDDQNIEEEEKAPLVPLEKTFHEFVDHSSGYCMIPHTPLPRK

XP_024932191.1 uncharacterized protein LOC112492555, partial [Ziziphus jujuba]3.0e-1629.29Show/hide
Query:  EQLYEAWERYNSMLRKCPQHGYPDWFQVQLFYKGLSRDFKTILDTAVGGNFLAKTVRDARALVEESLTIEALTKALNKLSG-SEIPSVPKVELKMESQPE
        E LY+AWER+  +LR+CP HG+P W QVQ+FY GL    K ++D A GG+ + K   +A  L+EE         +  +L+G S++ +V  V++       
Subjt:  EQLYEAWERYNSMLRKCPQHGYPDWFQVQLFYKGLSRDFKTILDTAVGGNFLAKTVRDARALVEESLTIEALTKALNKLSG-SEIPSVPKVELKMESQPE

Query:  EVVHQEKKNPSEDTLGKFSEEIKNLMQAIVERDLFISKMEAKLDLLMNQIQ--QEKLSNVVAMDTQEQCLDISLRSGKQEVERKEVKQTSIKRILDEDDD
             +  N     +G+  +++ N  Q    + + I  +E ++  L  Q Q  Q  L +    + +EQ   I+LRSGKQ    KE  +  +  ILD++D+
Subjt:  EVVHQEKKNPSEDTLGKFSEEIKNLMQAIVERDLFISKMEAKLDLLMNQIQ--QEKLSNVVAMDTQEQCLDISLRSGKQEVERKEVKQTSIKRILDEDDD

Query:  QNIEEEEKAPLVPLEKTFHEFVDHSSGYCMIPHTPLPRK
        ++          P++ T H  V H +    + H    R+
Subjt:  QNIEEEEKAPLVPLEKTFHEFVDHSSGYCMIPHTPLPRK

TrEMBL top hitse value%identityAlignment
A0A6J1DU19 uncharacterized protein LOC1110243612.7e-1528.57Show/hide
Query:  FEQMEEEQLYEAWERYNSMLRKCPQHGYPDWFQVQLFYKGLSRDFKTILDTAVGGNFLAKTVRDARALVEE-----------------------------
        F + + EQL+E WERY  +LRKCPQHG  +W Q+Q+FY GL+   +TILD A GG  L++T  +A  L+++                             
Subjt:  FEQMEEEQLYEAWERYNSMLRKCPQHGYPDWFQVQLFYKGLSRDFKTILDTAVGGNFLAKTVRDARALVEE-----------------------------

Query:  -SLTIEALTKALNKLSG------SEIPSVPKVELKMESQPEEVVH----QEKKNPSEDTLGKFSEEIKNLMQAIVERDLFISKMEAKLD-----------
            ++ALT A++KLSG      +E+ +        E   E+        EKK+  ED LG F  E ++    I  +   +  ME KL+           
Subjt:  -SLTIEALTKALNKLSG------SEIPSVPKVELKMESQPEEVVH----QEKKNPSEDTLGKFSEEIKNLMQAIVERDLFISKMEAKLD-----------

Query:  ------LLMNQIQQEKLSNVVAMDTQEQCLDISLRSGK--QEVERKEVKQTSIKRILDEDDDQNIEE--EEKAPLVPLEK
                +N +Q+ K  + + +  +E C  ++LRSGK  QE E+K++++     ++  ++ +N EE  +E  P +  +K
Subjt:  ------LLMNQIQQEKLSNVVAMDTQEQCLDISLRSGK--QEVERKEVKQTSIKRILDEDDDQNIEE--EEKAPLVPLEK

A0A6P3YRS3 uncharacterized protein LOC1074037772.7e-1528.57Show/hide
Query:  FEQMEEEQLYEAWERYNSMLRKCPQHGYPDWFQVQLFYKGLSRDFKTILDTAVGGNFLAKTVRDARALVEESLTIEALTKALNKLSG-SEIPSVPKVELK
        F Q ++E LY+AWER+  +LR+CP HG+P W QVQ+FY GL    K ++D   GG+ + K    A  L+EE         +  +L+G S++ +V  V++ 
Subjt:  FEQMEEEQLYEAWERYNSMLRKCPQHGYPDWFQVQLFYKGLSRDFKTILDTAVGGNFLAKTVRDARALVEESLTIEALTKALNKLSG-SEIPSVPKVELK

Query:  MESQPEEVVHQEKKNPSEDTLGKFSEEIKNLMQAIVERDLFISKMEAKLDLLMNQIQ--QEKLSNVVAMDTQEQCLDISLRSGKQEVERKEVKQTSIKRI
                   +  N     +G+  +++ N  Q    +   I  +E ++  L  Q Q  Q  L +    + +EQ   I+LRSGKQ    KE  +  +   
Subjt:  MESQPEEVVHQEKKNPSEDTLGKFSEEIKNLMQAIVERDLFISKMEAKLDLLMNQIQ--QEKLSNVVAMDTQEQCLDISLRSGKQEVERKEVKQTSIKRI

Query:  LDEDDDQNIEEEEKAPLVPLEKTFHEFVDHSSGYCMIPHTPLPRK
        LD++D+++          P++ T H  V H +    + H    R+
Subjt:  LDEDDDQNIEEEEKAPLVPLEKTFHEFVDHSSGYCMIPHTPLPRK

A0A6P6FPE5 Reverse transcriptase8.0e-1528.45Show/hide
Query:  EQLYEAWERYNSMLRKCPQHGYPDWFQVQLFYKGLSRDFKTILDTAVGGNFLAKTVRDARALVEESLTIEALTKALNKLSG-SEIPSVPKVELKMESQPE
        E LY+AWE +  +LR+CP HG+P W QVQ+FY GL    K ++D A GG+ + K   +A  L+EE         +  +L+G S++  V  V++       
Subjt:  EQLYEAWERYNSMLRKCPQHGYPDWFQVQLFYKGLSRDFKTILDTAVGGNFLAKTVRDARALVEESLTIEALTKALNKLSG-SEIPSVPKVELKMESQPE

Query:  EVVHQEKKNPSEDTLGKFSEEIKNLMQAIVERDLFISKMEAKLDLLMNQIQ--QEKLSNVVAMDTQEQCLDISLRSGKQEVERKEVKQTSIKRILDEDDD
             +  N     +G+  +++ N  Q    +   I  +E ++  L  Q Q  Q  L +    + +EQ   I+L+SGKQ    KE  +  +  ILD++D+
Subjt:  EVVHQEKKNPSEDTLGKFSEEIKNLMQAIVERDLFISKMEAKLDLLMNQIQ--QEKLSNVVAMDTQEQCLDISLRSGKQEVERKEVKQTSIKRILDEDDD

Query:  QNIEEEEKAPLVPLEKTFHEFVDHSSGYCMIPHTPLPRK
        ++          P++ T H  V H +    + H    R+
Subjt:  QNIEEEEKAPLVPLEKTFHEFVDHSSGYCMIPHTPLPRK

A0A6P6GBP4 uncharacterized protein LOC1074219981.3e-1729.8Show/hide
Query:  FEQMEEEQLYEAWERYNSMLRKCPQHGYPDWFQVQLFYKGLSRDFKTILDTAVGGNFLAKTVRDARALVEESLTIEALTKALNKLSG-SEIPSVPKVELK
        F Q ++E LY+AWER+  +LR+CP HG+P W QVQ+FY GL    K ++D A GG+ + K   +A  L+EE         +  +L+G S++ +V  V++ 
Subjt:  FEQMEEEQLYEAWERYNSMLRKCPQHGYPDWFQVQLFYKGLSRDFKTILDTAVGGNFLAKTVRDARALVEESLTIEALTKALNKLSG-SEIPSVPKVELK

Query:  MESQPEEVVHQEKKNPSEDTLGKFSEEIKNLMQAIVERDLFISKMEAKLDLLMNQIQ--QEKLSNVVAMDTQEQCLDISLRSGKQEVERKEVKQTSIKRI
                   +  N     +G+  +++ N  Q    +   I  +E ++  L  Q Q  Q  L +    + +EQ   I+LRSGKQ V  KE  +  +  I
Subjt:  MESQPEEVVHQEKKNPSEDTLGKFSEEIKNLMQAIVERDLFISKMEAKLDLLMNQIQ--QEKLSNVVAMDTQEQCLDISLRSGKQEVERKEVKQTSIKRI

Query:  LDEDDDQNIEEEEKAPLVPLEKTFHEFVDHSSGYCMIPHTPLPRK
        LD++D+++          P++ T H  V H +    + H    R+
Subjt:  LDEDDDQNIEEEEKAPLVPLEKTFHEFVDHSSGYCMIPHTPLPRK

A0A6P6GDJ4 Reverse transcriptase1.5e-1629.29Show/hide
Query:  EQLYEAWERYNSMLRKCPQHGYPDWFQVQLFYKGLSRDFKTILDTAVGGNFLAKTVRDARALVEESLTIEALTKALNKLSG-SEIPSVPKVELKMESQPE
        E LY+AWER+  +LR+CP HG+P W QVQ+FY GL    K ++D A GG+ + K   +A  L+EE         +  +L+G S++ +V  V++       
Subjt:  EQLYEAWERYNSMLRKCPQHGYPDWFQVQLFYKGLSRDFKTILDTAVGGNFLAKTVRDARALVEESLTIEALTKALNKLSG-SEIPSVPKVELKMESQPE

Query:  EVVHQEKKNPSEDTLGKFSEEIKNLMQAIVERDLFISKMEAKLDLLMNQIQ--QEKLSNVVAMDTQEQCLDISLRSGKQEVERKEVKQTSIKRILDEDDD
             +  N     +G+  +++ N  Q    + + I  +E ++  L  Q Q  Q  L +    + +EQ   I+LRSGKQ    KE  +  +  ILD++D+
Subjt:  EVVHQEKKNPSEDTLGKFSEEIKNLMQAIVERDLFISKMEAKLDLLMNQIQ--QEKLSNVVAMDTQEQCLDISLRSGKQEVERKEVKQTSIKRILDEDDD

Query:  QNIEEEEKAPLVPLEKTFHEFVDHSSGYCMIPHTPLPRK
        ++          P++ T H  V H +    + H    R+
Subjt:  QNIEEEEKAPLVPLEKTFHEFVDHSSGYCMIPHTPLPRK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTGAACAAATGGAGGAAGAGCAATTATATGAGGCTTGGGAAAGATATAACAGCATGTTAAGGAAATGCCCACAACATGGGTACCCAGACTGGTTTCAAGTGCAACT
TTTTTATAAGGGGTTGAGTCGGGACTTTAAAACAATTCTTGACACAGCGGTGGGAGGAAACTTCTTAGCCAAAACTGTCAGGGATGCTCGAGCCCTAGTAGAAGAGTCAT
TGACAATCGAAGCTTTAACCAAGGCTCTAAACAAGCTCTCAGGATCAGAGATTCCAAGTGTGCCTAAAGTTGAATTAAAAATGGAGTCTCAACCTGAGGAAGTTGTTCAT
CAAGAGAAAAAGAACCCTTCGGAAGACACATTAGGAAAGTTTAGTGAAGAGATCAAGAATTTGATGCAAGCCATAGTAGAACGAGATCTTTTCATTAGTAAAATGGAGGC
AAAGCTCGATCTTCTCATGAATCAAATTCAGCAAGAAAAATTATCCAATGTTGTCGCCATGGACACACAAGAACAATGCCTGGACATATCTCTGAGAAGTGGGAAGCAGG
AAGTAGAGAGGAAAGAAGTCAAACAGACCAGCATTAAGAGGATATTGGATGAAGATGATGATCAAAACATAGAAGAGGAAGAGAAAGCGCCGCTAGTCCCACTTGAAAAG
ACGTTCCATGAGTTTGTGGACCACTCCAGTGGATATTGCATGATACCTCACACCCCACTACCGAGGAAACTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTTGAACAAATGGAGGAAGAGCAATTATATGAGGCTTGGGAAAGATATAACAGCATGTTAAGGAAATGCCCACAACATGGGTACCCAGACTGGTTTCAAGTGCAACT
TTTTTATAAGGGGTTGAGTCGGGACTTTAAAACAATTCTTGACACAGCGGTGGGAGGAAACTTCTTAGCCAAAACTGTCAGGGATGCTCGAGCCCTAGTAGAAGAGTCAT
TGACAATCGAAGCTTTAACCAAGGCTCTAAACAAGCTCTCAGGATCAGAGATTCCAAGTGTGCCTAAAGTTGAATTAAAAATGGAGTCTCAACCTGAGGAAGTTGTTCAT
CAAGAGAAAAAGAACCCTTCGGAAGACACATTAGGAAAGTTTAGTGAAGAGATCAAGAATTTGATGCAAGCCATAGTAGAACGAGATCTTTTCATTAGTAAAATGGAGGC
AAAGCTCGATCTTCTCATGAATCAAATTCAGCAAGAAAAATTATCCAATGTTGTCGCCATGGACACACAAGAACAATGCCTGGACATATCTCTGAGAAGTGGGAAGCAGG
AAGTAGAGAGGAAAGAAGTCAAACAGACCAGCATTAAGAGGATATTGGATGAAGATGATGATCAAAACATAGAAGAGGAAGAGAAAGCGCCGCTAGTCCCACTTGAAAAG
ACGTTCCATGAGTTTGTGGACCACTCCAGTGGATATTGCATGATACCTCACACCCCACTACCGAGGAAACTTTGA
Protein sequenceShow/hide protein sequence
MFEQMEEEQLYEAWERYNSMLRKCPQHGYPDWFQVQLFYKGLSRDFKTILDTAVGGNFLAKTVRDARALVEESLTIEALTKALNKLSGSEIPSVPKVELKMESQPEEVVH
QEKKNPSEDTLGKFSEEIKNLMQAIVERDLFISKMEAKLDLLMNQIQQEKLSNVVAMDTQEQCLDISLRSGKQEVERKEVKQTSIKRILDEDDDQNIEEEEKAPLVPLEK
TFHEFVDHSSGYCMIPHTPLPRKL