; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0018633 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0018633
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr5:31246931..31248042
RNA-Seq ExpressionLag0018633
SyntenyLag0018633
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022135942.1 uncharacterized protein LOC111007775 [Momordica charantia]3.1e-1934.52Show/hide
Query:  NELEWDQFEEWVVLLWAIWYKRNE--MKQKKKVSITNMTDWVVGYLNAFRDSGR-RDMDLLGGSPTRAVCRWAPPEVVGFKVNVDAAFCLESGSTGVGVV
        + ++W   EE  V LWAIW  RN+          + NM DWV  YL  ++ +     + LL       V  W PP    FKVNVDAAF   + S G+ ++
Subjt:  NELEWDQFEEWVVLLWAIWYKRNE--MKQKKKVSITNMTDWVVGYLNAFRDSGR-RDMDLLGGSPTRAVCRWAPPEVVGFKVNVDAAFCLESGSTGVGVV

Query:  CRDSWEQVGFSTTVFHEDVRDADFAEGLVVAISLRLTVETATRPFVLDTDSMRVFKLLRRDVDEVSELGML---VEDAVRGVPVGGLLAAALRSGKA
         RDS   V  S   F   V D   AE L     + L +E    PF ++TDS +VF LLR D ++ SE+G+L   +   V  + +GG  +   R G +
Subjt:  CRDSWEQVGFSTTVFHEDVRDADFAEGLVVAISLRLTVETATRPFVLDTDSMRVFKLLRRDVDEVSELGML---VEDAVRGVPVGGLLAAALRSGKA

XP_022139684.1 uncharacterized protein LOC111010533 [Momordica charantia]3.8e-1732.28Show/hide
Query:  LLRDVKNELEWDQFEEWVVLLWAIWYKRNE-MKQKKKVSITNMTDWVVGYLNAFR----DSGRRDMDLLGGSPTRAVCR-------WAPPEVVGFKVNVD
        +LRD ++ L W  FEE VV LW++W +RN  +  K++V   ++  WV  Y+  F+    +    + D+       +          W P E   FK+  D
Subjt:  LLRDVKNELEWDQFEEWVVLLWAIWYKRNE-MKQKKKVSITNMTDWVVGYLNAFR----DSGRRDMDLLGGSPTRAVCR-------WAPPEVVGFKVNVD

Query:  AAFCLESGSTGVGV-VCRDSWEQVGFSTTVFHEDVRDADFAEGLVVAISLRLTVETATRPFVLDTDSMRVFKLLRRDVDEVSELGMLVE
        A+F     + G+GV + RD   QV  S T + E V   D AE L     LR+ +ET   P +L+TDS+R++ L  RD + +S+ G ++E
Subjt:  AAFCLESGSTGVGV-VCRDSWEQVGFSTTVFHEDVRDADFAEGLVVAISLRLTVETATRPFVLDTDSMRVFKLLRRDVDEVSELGMLVE

XP_022150944.1 uncharacterized protein LOC111018973 [Momordica charantia]4.5e-1832.08Show/hide
Query:  LRLFWHC---KHMKEIIWSAGFGAILSKCKTDDIKFLLRDVKNELEWDQFEEWVVLLWAIWYKRNEMKQKKKV--SITNMTDWVVGYLNAFRDSGRRDMD
        +R  W C    H   ++W              D+   +R   + + W      VVLLWAIW  RN+  Q   +  S++++  W   YL  ++ + R    
Subjt:  LRLFWHC---KHMKEIIWSAGFGAILSKCKTDDIKFLLRDVKNELEWDQFEEWVVLLWAIWYKRNEMKQKKKV--SITNMTDWVVGYLNAFRDSGRRDMD

Query:  LLGGSPTRAVCRWAPPEVVGFKVNVDAAFCLESGSTGVGVVCRDSWEQVGFSTTVFHEDVRDADFAEGLVVAISLRLTVETATRPFVLDTDSMRVFKLLR
         L       V  W PP     KVNVDAAF  ES   GVGV+ RDS   V  +         D D+ EG  V   + L VE     F ++TDS+R+F LL 
Subjt:  LLGGSPTRAVCRWAPPEVVGFKVNVDAAFCLESGSTGVGVVCRDSWEQVGFSTTVFHEDVRDADFAEGLVVAISLRLTVETATRPFVLDTDSMRVFKLLR

Query:  RDVDEVSELGML
         D  + SE+G+L
Subjt:  RDVDEVSELGML

XP_024172006.1 uncharacterized protein LOC112178017 [Rosa chinensis]1.2e-1325.78Show/hide
Query:  ESSLRLFWHCKHMKEIIWSAGFGAILSKCKTDDIKFLLRDVKNELEWDQFEEWVVLLWAIWYKRNEMKQKKKVS-ITNMTDWVVGYLNAFRDSGRRDMDL
        E SL LF +C  ++     +       K  +  +     D+ + L  ++ E +++ LW +W +RN +  K  VS  TNM  W   +L+ ++   +R    
Subjt:  ESSLRLFWHCKHMKEIIWSAGFGAILSKCKTDDIKFLLRDVKNELEWDQFEEWVVLLWAIWYKRNEMKQKKKVS-ITNMTDWVVGYLNAFRDSGRRDMDL

Query:  LGGSPTRAVCRWAPPEVVGFKVNVDAAFCLESGSTGVGVVCRDSWEQVGFSTTVFHEDVRDADFA------EGLVVAISLRLTVETATRPFVLDTDSMRV
         GG   R++ +W  P     K+N+D +FC E+G  GVGVV R+      F  T      R   FA      E   +   L + ++   +  ++++D + +
Subjt:  LGGSPTRAVCRWAPPEVVGFKVNVDAAFCLESGSTGVGVVCRDSWEQVGFSTTVFHEDVRDADFA------EGLVVAISLRLTVETATRPFVLDTDSMRV

Query:  FKLLRRDVDEVSELGMLVEDAVRGV
           LR   D+ S +G +++D  R V
Subjt:  FKLLRRDVDEVSELGMLVEDAVRGV

XP_024195790.1 uncharacterized protein LOC112198938 [Rosa chinensis]4.4e-1325.11Show/hide
Query:  ESSLRLFWHCKHMKEIIWSAGFGAILSKCKTDDIKFLLRDVKNELEWDQFEEWVVLLWAIWYKRNEMKQKKKVS-ITNMTDWVVGYLNAFRDSGRRDMDL
        E SL LF +C  ++     +       K  +  +      + + L  ++ E +++ LW +W +RN +  K  VS  TNM  W   +L+ ++   +R    
Subjt:  ESSLRLFWHCKHMKEIIWSAGFGAILSKCKTDDIKFLLRDVKNELEWDQFEEWVVLLWAIWYKRNEMKQKKKVS-ITNMTDWVVGYLNAFRDSGRRDMDL

Query:  LGGSPTRAVCRWAPPEVVGFKVNVDAAFCLESGSTGVGVVCRDSWEQVGFSTTVFHEDVRDADFAEGLV------VAISLRLTVETATRPFVLDTDSMRV
         GG   R++ +W  P     K+N+D +FC E+G  GVGVV R+      F  T     VR   FA+  +      +   L + ++   +  ++++D + +
Subjt:  LGGSPTRAVCRWAPPEVVGFKVNVDAAFCLESGSTGVGVVCRDSWEQVGFSTTVFHEDVRDADFAEGLV------VAISLRLTVETATRPFVLDTDSMRV

Query:  FKLLRRDVDEVSELGMLVEDAVR
           LR   D+ S +G +++D  R
Subjt:  FKLLRRDVDEVSELGMLVEDAVR

TrEMBL top hitse value%identityAlignment
A0A6J1C467 uncharacterized protein LOC1110077751.5e-1934.52Show/hide
Query:  NELEWDQFEEWVVLLWAIWYKRNE--MKQKKKVSITNMTDWVVGYLNAFRDSGR-RDMDLLGGSPTRAVCRWAPPEVVGFKVNVDAAFCLESGSTGVGVV
        + ++W   EE  V LWAIW  RN+          + NM DWV  YL  ++ +     + LL       V  W PP    FKVNVDAAF   + S G+ ++
Subjt:  NELEWDQFEEWVVLLWAIWYKRNE--MKQKKKVSITNMTDWVVGYLNAFRDSGR-RDMDLLGGSPTRAVCRWAPPEVVGFKVNVDAAFCLESGSTGVGVV

Query:  CRDSWEQVGFSTTVFHEDVRDADFAEGLVVAISLRLTVETATRPFVLDTDSMRVFKLLRRDVDEVSELGML---VEDAVRGVPVGGLLAAALRSGKA
         RDS   V  S   F   V D   AE L     + L +E    PF ++TDS +VF LLR D ++ SE+G+L   +   V  + +GG  +   R G +
Subjt:  CRDSWEQVGFSTTVFHEDVRDADFAEGLVVAISLRLTVETATRPFVLDTDSMRVFKLLRRDVDEVSELGML---VEDAVRGVPVGGLLAAALRSGKA

A0A6J1CDQ4 uncharacterized protein LOC1110105331.9e-1732.28Show/hide
Query:  LLRDVKNELEWDQFEEWVVLLWAIWYKRNE-MKQKKKVSITNMTDWVVGYLNAFR----DSGRRDMDLLGGSPTRAVCR-------WAPPEVVGFKVNVD
        +LRD ++ L W  FEE VV LW++W +RN  +  K++V   ++  WV  Y+  F+    +    + D+       +          W P E   FK+  D
Subjt:  LLRDVKNELEWDQFEEWVVLLWAIWYKRNE-MKQKKKVSITNMTDWVVGYLNAFR----DSGRRDMDLLGGSPTRAVCR-------WAPPEVVGFKVNVD

Query:  AAFCLESGSTGVGV-VCRDSWEQVGFSTTVFHEDVRDADFAEGLVVAISLRLTVETATRPFVLDTDSMRVFKLLRRDVDEVSELGMLVE
        A+F     + G+GV + RD   QV  S T + E V   D AE L     LR+ +ET   P +L+TDS+R++ L  RD + +S+ G ++E
Subjt:  AAFCLESGSTGVGV-VCRDSWEQVGFSTTVFHEDVRDADFAEGLVVAISLRLTVETATRPFVLDTDSMRVFKLLRRDVDEVSELGMLVE

A0A6J1DAR4 uncharacterized protein LOC1110189541.8e-1226.29Show/hide
Query:  GESSLRLFWHCKHMKEIIWSAGFGAILSKCKTDDIKFLLRDVKNELEWDQFEEWVVLLWAIWYKRN------EMKQKKKVSITNMTDWVVGYLNAFRDSG
        GE S+ LFW CK  + +  ++ FG +           +LR+    L    FEE  V++W +W +RN        K   K+ +  + +W   Y   FR++ 
Subjt:  GESSLRLFWHCKHMKEIIWSAGFGAILSKCKTDDIKFLLRDVKNELEWDQFEEWVVLLWAIWYKRN------EMKQKKKVSITNMTDWVVGYLNAFRDSG

Query:  RRDMDLLGGSPTRAVCRWAPPEVVGFKVNVDAAFCLESGSTGVGVVCRDSWEQVGFSTTVFHEDVRDADFAEGLVVAISLRLTVETATRPFVLD
         +   + G     A   W PP+   +K+N DA+F       G+G++  +   QV  + T + E+++  D AE +     L+L  E    P + D
Subjt:  RRDMDLLGGSPTRAVCRWAPPEVVGFKVNVDAAFCLESGSTGVGVVCRDSWEQVGFSTTVFHEDVRDADFAEGLVVAISLRLTVETATRPFVLD

A0A6J1DBJ7 uncharacterized protein LOC1110189732.2e-1832.08Show/hide
Query:  LRLFWHC---KHMKEIIWSAGFGAILSKCKTDDIKFLLRDVKNELEWDQFEEWVVLLWAIWYKRNEMKQKKKV--SITNMTDWVVGYLNAFRDSGRRDMD
        +R  W C    H   ++W              D+   +R   + + W      VVLLWAIW  RN+  Q   +  S++++  W   YL  ++ + R    
Subjt:  LRLFWHC---KHMKEIIWSAGFGAILSKCKTDDIKFLLRDVKNELEWDQFEEWVVLLWAIWYKRNEMKQKKKV--SITNMTDWVVGYLNAFRDSGRRDMD

Query:  LLGGSPTRAVCRWAPPEVVGFKVNVDAAFCLESGSTGVGVVCRDSWEQVGFSTTVFHEDVRDADFAEGLVVAISLRLTVETATRPFVLDTDSMRVFKLLR
         L       V  W PP     KVNVDAAF  ES   GVGV+ RDS   V  +         D D+ EG  V   + L VE     F ++TDS+R+F LL 
Subjt:  LLGGSPTRAVCRWAPPEVVGFKVNVDAAFCLESGSTGVGVVCRDSWEQVGFSTTVFHEDVRDADFAEGLVVAISLRLTVETATRPFVLDTDSMRVFKLLR

Query:  RDVDEVSELGML
         D  + SE+G+L
Subjt:  RDVDEVSELGML

A0A803P3X4 Uncharacterized protein3.6e-1327.63Show/hide
Query:  ESSLRLFWHCKHMKEIIWSAGFGAILSKCKTDDIKFLLRDVKNELEWDQFEEWVVLLWAIWYKRNEMKQ-KKKVSITNMTDWVVGYLNAFRDSGRRDMDL
        E      W C+  +E+  S GF   + +  ++D+   L  +   L  ++FE ++VL W +WY RN +     K     + +W   +L+ FR+S     D 
Subjt:  ESSLRLFWHCKHMKEIIWSAGFGAILSKCKTDDIKFLLRDVKNELEWDQFEEWVVLLWAIWYKRNEMKQ-KKKVSITNMTDWVVGYLNAFRDSGRRDMDL

Query:  LGGSPTRAVCRWAPPEVVGFKVNVDAAFCLESGSTGVGVVCRDSWEQV-GFSTTVFHEDVRDADFAEGLVVAISLRLTVETATRPFVLDTDSMRVFKLLR
              R   RW PP +  FK+NVDA    E+G   +  V RD    V   + TV  +++     AE   +A  L+  ++     F +++D ++   L++
Subjt:  LGGSPTRAVCRWAPPEVVGFKVNVDAAFCLESGSTGVGVVCRDSWEQV-GFSTTVFHEDVRDADFAEGLVVAISLRLTVETATRPFVLDTDSMRVFKLLR

Query:  ------RDVDE-VSELGMLVEDA-VRGV
              RDVDE V+ +  L+++  VRGV
Subjt:  ------RDVDE-VSELGMLVEDA-VRGV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGGAGTCGAGTCTTCGCCTGTTCTGGCATTGTAAGCATATGAAGGAGATTATTTGGTCTGCGGGTTTTGGGGCTATTTTGTCCAAATGCAAGACAGACGATATTAA
GTTCCTTCTCCGAGATGTAAAGAATGAGTTGGAGTGGGATCAATTTGAGGAATGGGTGGTGTTATTGTGGGCGATCTGGTATAAACGGAATGAAATGAAGCAGAAAAAGA
AGGTCTCAATTACGAATATGACAGATTGGGTGGTCGGGTATCTGAACGCATTCCGTGATTCGGGGAGGAGGGATATGGATCTGTTGGGGGGAAGTCCTACTCGGGCTGTT
TGCAGGTGGGCACCGCCAGAGGTTGTTGGGTTCAAGGTGAATGTCGATGCGGCCTTTTGTCTGGAGAGCGGTTCAACAGGGGTAGGCGTGGTATGTCGAGATTCCTGGGA
GCAGGTGGGCTTCTCAACTACGGTTTTCCACGAGGATGTCAGAGATGCTGACTTTGCAGAAGGTTTGGTTGTTGCTATCAGTCTGAGACTTACTGTGGAGACGGCTACTC
GACCTTTTGTTCTAGATACAGATTCTATGCGGGTGTTCAAGCTGCTGCGGCGTGATGTGGATGAGGTGTCAGAGTTGGGGATGTTGGTGGAGGATGCGGTGAGGGGTGTT
CCAGTGGGTGGTTTGTTGGCAGCAGCTTTACGTTCAGGGAAGGCAACCGTGTGGCCCACCATTTGGCAAGGTTGGCAAATGAGGACAAATGTGACCGCGTATGGATGGAA
GAAGGTTCTTGATGTGTCTTGGGCTTGTTGGCTGATGATGGAGTGCATGAGTTTCATTAGGCGAGGCGGGAAAGGTGATCAGTCTAAGCAGATCCAACTGTCGTCCCAAC
CATTATGCCTATTCACAGCGAAGGTTGGGGATGAGAGATGGTGCAGGCTAGTGGGCTGGGGCTTAAGTCTGGATGCACCTGAGCTCCAGGCTAAGTCTTTCTCATGTTAT
GCTGCTTCTGTTTTGCTCTGCTTGATTGGGTTGAGGCCATGCAGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGGGAGTCGAGTCTTCGCCTGTTCTGGCATTGTAAGCATATGAAGGAGATTATTTGGTCTGCGGGTTTTGGGGCTATTTTGTCCAAATGCAAGACAGACGATATTAA
GTTCCTTCTCCGAGATGTAAAGAATGAGTTGGAGTGGGATCAATTTGAGGAATGGGTGGTGTTATTGTGGGCGATCTGGTATAAACGGAATGAAATGAAGCAGAAAAAGA
AGGTCTCAATTACGAATATGACAGATTGGGTGGTCGGGTATCTGAACGCATTCCGTGATTCGGGGAGGAGGGATATGGATCTGTTGGGGGGAAGTCCTACTCGGGCTGTT
TGCAGGTGGGCACCGCCAGAGGTTGTTGGGTTCAAGGTGAATGTCGATGCGGCCTTTTGTCTGGAGAGCGGTTCAACAGGGGTAGGCGTGGTATGTCGAGATTCCTGGGA
GCAGGTGGGCTTCTCAACTACGGTTTTCCACGAGGATGTCAGAGATGCTGACTTTGCAGAAGGTTTGGTTGTTGCTATCAGTCTGAGACTTACTGTGGAGACGGCTACTC
GACCTTTTGTTCTAGATACAGATTCTATGCGGGTGTTCAAGCTGCTGCGGCGTGATGTGGATGAGGTGTCAGAGTTGGGGATGTTGGTGGAGGATGCGGTGAGGGGTGTT
CCAGTGGGTGGTTTGTTGGCAGCAGCTTTACGTTCAGGGAAGGCAACCGTGTGGCCCACCATTTGGCAAGGTTGGCAAATGAGGACAAATGTGACCGCGTATGGATGGAA
GAAGGTTCTTGATGTGTCTTGGGCTTGTTGGCTGATGATGGAGTGCATGAGTTTCATTAGGCGAGGCGGGAAAGGTGATCAGTCTAAGCAGATCCAACTGTCGTCCCAAC
CATTATGCCTATTCACAGCGAAGGTTGGGGATGAGAGATGGTGCAGGCTAGTGGGCTGGGGCTTAAGTCTGGATGCACCTGAGCTCCAGGCTAAGTCTTTCTCATGTTAT
GCTGCTTCTGTTTTGCTCTGCTTGATTGGGTTGAGGCCATGCAGCTGA
Protein sequenceShow/hide protein sequence
MGESSLRLFWHCKHMKEIIWSAGFGAILSKCKTDDIKFLLRDVKNELEWDQFEEWVVLLWAIWYKRNEMKQKKKVSITNMTDWVVGYLNAFRDSGRRDMDLLGGSPTRAV
CRWAPPEVVGFKVNVDAAFCLESGSTGVGVVCRDSWEQVGFSTTVFHEDVRDADFAEGLVVAISLRLTVETATRPFVLDTDSMRVFKLLRRDVDEVSELGMLVEDAVRGV
PVGGLLAAALRSGKATVWPTIWQGWQMRTNVTAYGWKKVLDVSWACWLMMECMSFIRRGGKGDQSKQIQLSSQPLCLFTAKVGDERWCRLVGWGLSLDAPELQAKSFSCY
AASVLLCLIGLRPCS