; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0018639 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0018639
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionWD repeat-containing protein 25
Genome locationchr5:31384416..31390570
RNA-Seq ExpressionLag0018639
SyntenyLag0018639
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600751.1 WD repeat-containing protein 25, partial [Cucurbita argyrosperma subsp. sororia]3.0e-2974Show/hide
Query:  MESLFKAYSNASDEDGEEEEHKPKRLALPSPPSNRPVPQPSKFQPKFRPLHCSDSSSEPQKGIMVPGRYVSKRERALLSSTPVSRAPESFLNPSVQSSIV
        ME LF+AYSN SDED +E+E +PKRLALPS  S R  P+ S+FQP FRP +C DS+SEPQK IMVPGRY+SKRERAL+SS PVSRAPESFLNPSVQSS V
Subjt:  MESLFKAYSNASDEDGEEEEHKPKRLALPSPPSNRPVPQPSKFQPKFRPLHCSDSSSEPQKGIMVPGRYVSKRERALLSSTPVSRAPESFLNPSVQSSIV
KAG7031391.1 WD repeat-containing protein 25, partial [Cucurbita argyrosperma subsp. argyrosperma]3.0e-2974Show/hide
Query:  MESLFKAYSNASDEDGEEEEHKPKRLALPSPPSNRPVPQPSKFQPKFRPLHCSDSSSEPQKGIMVPGRYVSKRERALLSSTPVSRAPESFLNPSVQSSIV
        ME LF+AYSN SDED +E+E +PKRLALPS  S R  P+ S+FQP FRP +C DS+SEPQK IMVPGRY+SKRERAL+SS PVSRAPESFLNPSVQSS V
Subjt:  MESLFKAYSNASDEDGEEEEHKPKRLALPSPPSNRPVPQPSKFQPKFRPLHCSDSSSEPQKGIMVPGRYVSKRERALLSSTPVSRAPESFLNPSVQSSIV
XP_022941667.1 WD repeat-containing protein 25 [Cucurbita moschata]6.7e-2974Show/hide
Query:  MESLFKAYSNASDEDGEEEEHKPKRLALPSPPSNRPVPQPSKFQPKFRPLHCSDSSSEPQKGIMVPGRYVSKRERALLSSTPVSRAPESFLNPSVQSSIV
        ME LF+AYSN SDED +E+E +PKRLALPS  S R  P+ S+FQP FRP H  DS+SEPQK IMVPGRY+SKRERAL+SS PVSRAPESFLNPSVQSS V
Subjt:  MESLFKAYSNASDEDGEEEEHKPKRLALPSPPSNRPVPQPSKFQPKFRPLHCSDSSSEPQKGIMVPGRYVSKRERALLSSTPVSRAPESFLNPSVQSSIV
XP_022992622.1 WD repeat-containing protein 25 [Cucurbita maxima]1.0e-2975Show/hide
Query:  MESLFKAYSNASDEDGEEEEHKPKRLALPSPPSNRPVPQPSKFQPKFRPLHCSDSSSEPQKGIMVPGRYVSKRERALLSSTPVSRAPESFLNPSVQSSIV
        ME LF+AYSN SDED EE+E +PKRLALPS  S R  P+ S+FQP FRP HC DS+SEPQK IMVPGRY+SKRERAL+SS PVSRAPESFLNPSVQ S V
Subjt:  MESLFKAYSNASDEDGEEEEHKPKRLALPSPPSNRPVPQPSKFQPKFRPLHCSDSSSEPQKGIMVPGRYVSKRERALLSSTPVSRAPESFLNPSVQSSIV
XP_038903500.1 WD repeat-containing protein 25 [Benincasa hispida]1.3e-2773Show/hide
Query:  MESLFKAYSNASDEDGEEEEHKPKRLALPSPPSNRPVPQPSKFQPKFRPLHCSDSSSEPQKGIMVPGRYVSKRERALLSSTPVSRAPESFLNPSVQSSIV
        MESLFKAYSNASD+  EE+E KPKRLA  S PS RP  +  KF+P FRP HC  S+SE Q+GIMVPGRYVSKRERALLSS PVSRAPES LNP++QSS V
Subjt:  MESLFKAYSNASDEDGEEEEHKPKRLALPSPPSNRPVPQPSKFQPKFRPLHCSDSSSEPQKGIMVPGRYVSKRERALLSSTPVSRAPESFLNPSVQSSIV
TrEMBL top hitse value%identityAlignment
A0A0A0L2H7 Uncharacterized protein1.4e-2772.16Show/hide
Query:  MESLFKAYSNASDEDGEEEEHKPKRLALPSPPSNRPVPQPSKFQPKFRPLHCSDSSSEPQKGIMVPGRYVSKRERALLSSTPVSRAPESFLNPSVQS
        MESLFKAYSN+SD+  EE+E KPKRLAL S PS RP  +P KF+P  R LHCSDS+SE  + IMVPGRYVSKRERALLSSTP SRAP+SF NPS Q+
Subjt:  MESLFKAYSNASDEDGEEEEHKPKRLALPSPPSNRPVPQPSKFQPKFRPLHCSDSSSEPQKGIMVPGRYVSKRERALLSSTPVSRAPESFLNPSVQS
A0A5A7U0J5 WD repeat-containing protein 25 isoform X24.0e-2770.1Show/hide
Query:  MESLFKAYSNASDEDGEEEEHKPKRLALPSPPSNRPVPQPSKFQPKFRPLHCSDSSSEPQKGIMVPGRYVSKRERALLSSTPVSRAPESFLNPSVQS
        MESLFKAYSN+SD+  EE+E KPKRLAL S PS RP  +P KF+P  RP HCS S+ +P + IMVPGRY+SKRERALLSS P SRAPESF NPS+QS
Subjt:  MESLFKAYSNASDEDGEEEEHKPKRLALPSPPSNRPVPQPSKFQPKFRPLHCSDSSSEPQKGIMVPGRYVSKRERALLSSTPVSRAPESFLNPSVQS
A0A6J1CMQ5 WD repeat-containing protein 251.4e-2772Show/hide
Query:  MESLFKAYSNASDEDGEEEEHKPKRLALPSPPSNRPVPQPSKFQPKFRPLHCSDSSSEPQKGIMVPGRYVSKRERALLSSTPVSRAPESFLNPSVQSSIV
        MESLF+AYSNAS++D  E+E +PKRLALPS PS RP P+ SKF PKF+P    D +SEPQKGIMVPGRYVSKRERALL + PVS AP+SFLNPSV SS V
Subjt:  MESLFKAYSNASDEDGEEEEHKPKRLALPSPPSNRPVPQPSKFQPKFRPLHCSDSSSEPQKGIMVPGRYVSKRERALLSSTPVSRAPESFLNPSVQSSIV
A0A6J1FN47 WD repeat-containing protein 253.3e-2974Show/hide
Query:  MESLFKAYSNASDEDGEEEEHKPKRLALPSPPSNRPVPQPSKFQPKFRPLHCSDSSSEPQKGIMVPGRYVSKRERALLSSTPVSRAPESFLNPSVQSSIV
        ME LF+AYSN SDED +E+E +PKRLALPS  S R  P+ S+FQP FRP H  DS+SEPQK IMVPGRY+SKRERAL+SS PVSRAPESFLNPSVQSS V
Subjt:  MESLFKAYSNASDEDGEEEEHKPKRLALPSPPSNRPVPQPSKFQPKFRPLHCSDSSSEPQKGIMVPGRYVSKRERALLSSTPVSRAPESFLNPSVQSSIV
A0A6J1JQD9 WD repeat-containing protein 255.0e-3075Show/hide
Query:  MESLFKAYSNASDEDGEEEEHKPKRLALPSPPSNRPVPQPSKFQPKFRPLHCSDSSSEPQKGIMVPGRYVSKRERALLSSTPVSRAPESFLNPSVQSSIV
        ME LF+AYSN SDED EE+E +PKRLALPS  S R  P+ S+FQP FRP HC DS+SEPQK IMVPGRY+SKRERAL+SS PVSRAPESFLNPSVQ S V
Subjt:  MESLFKAYSNASDEDGEEEEHKPKRLALPSPPSNRPVPQPSKFQPKFRPLHCSDSSSEPQKGIMVPGRYVSKRERALLSSTPVSRAPESFLNPSVQSSIV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G54520.1 Transducin/WD40 repeat-like superfamily protein2.9e-0635.25Show/hide
Query:  MESLFKAYSNASDEDGE---EEEHKPKRLALPSPPSNR--PVPQPSKFQPKFRPLHCSDSSSEPQKG----------IMVPGRYVSKRERALLSSTPVSR
        M+ +  +Y+N SD++ E    E    K  A PS PS R  PVP+  +++P  RP     S SE Q            + VPGRYVSKRER+LL+S     
Subjt:  MESLFKAYSNASDEDGE---EEEHKPKRLALPSPPSNR--PVPQPSKFQPKFRPLHCSDSSSEPQKG----------IMVPGRYVSKRERALLSSTPVSR

Query:  APES--------FLNPSVQSSI
         P+         + +P+V  SI
Subjt:  APES--------FLNPSVQSSI

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAATCTTTGTTCAAAGCTTACTCAAATGCTTCTGACGAAGACGGTGAAGAAGAAGAACATAAGCCCAAGCGTTTGGCCCTCCCCTCTCCACCTTCGAATAGACCCGT
ACCCCAACCTTCCAAATTCCAGCCGAAGTTCCGACCATTGCATTGCTCGGACTCGAGTTCAGAGCCTCAAAAGGGGATTATGGTTCCTGGACGCTATGTTTCCAAGAGAG
AGCGAGCACTCCTGAGTTCAACTCCAGTTTCTAGGGCTCCGGAATCATTTCTGAATCCATCCGTCCAATCTTCAATTGTGTTTTGGGGAATGATGGGTCTGATGGAAACG
GGAGTTAGTTCTTTGGAAGAGAAGATGGTGGAGAAACAATTGGGAGTGGAGGAGAAGATGGATATGAAGTTAGTGTTGGAGTGTCCAAATGTCCAACATGTGCCGGACAA
GGACACTCTAGCCAAACTAAAGGGTCTGTGCTTCTTAGAACACCATAGAACTCAACATGGCTACGAGATCTCATCAAGAGCAAGTTGTACTAATGTGACACCCTTCGAAA
AACCTCCTTCTCAGTGGTTGTGTACTCGACCTTCTCATCCATGTGGAATTGACCGTTGTACTACCGTGGACCCTTCTTCTTCATCAATAAAGGATGCAATTCCTCTGATG
TCGGTCCGTAGCTCCTCGGTTGGTTGGGCCTTTCTAGGTGTGGCGATTTCATCCCAAAGACTTAAGGCCCTCCCATGTCGGCCCTTGCTCTCTGCTGCTTGGGTCCTAGT
ATTTGGCATTACATTGAAAGACGAGGTTGCCTTCCTTGAAACTGTATCGTTTCGCAGCCTCAACCTCGACCCACTTGGTGAAGTAATCGATATTGACGAAGAGGCACCAG
AAGACATGGATATTGACGAAGTCCCTCCACGAACAAAGCGATACAAGGAATAG
mRNA sequenceShow/hide mRNA sequence
ATGGAATCTTTGTTCAAAGCTTACTCAAATGCTTCTGACGAAGACGGTGAAGAAGAAGAACATAAGCCCAAGCGTTTGGCCCTCCCCTCTCCACCTTCGAATAGACCCGT
ACCCCAACCTTCCAAATTCCAGCCGAAGTTCCGACCATTGCATTGCTCGGACTCGAGTTCAGAGCCTCAAAAGGGGATTATGGTTCCTGGACGCTATGTTTCCAAGAGAG
AGCGAGCACTCCTGAGTTCAACTCCAGTTTCTAGGGCTCCGGAATCATTTCTGAATCCATCCGTCCAATCTTCAATTGTGTTTTGGGGAATGATGGGTCTGATGGAAACG
GGAGTTAGTTCTTTGGAAGAGAAGATGGTGGAGAAACAATTGGGAGTGGAGGAGAAGATGGATATGAAGTTAGTGTTGGAGTGTCCAAATGTCCAACATGTGCCGGACAA
GGACACTCTAGCCAAACTAAAGGGTCTGTGCTTCTTAGAACACCATAGAACTCAACATGGCTACGAGATCTCATCAAGAGCAAGTTGTACTAATGTGACACCCTTCGAAA
AACCTCCTTCTCAGTGGTTGTGTACTCGACCTTCTCATCCATGTGGAATTGACCGTTGTACTACCGTGGACCCTTCTTCTTCATCAATAAAGGATGCAATTCCTCTGATG
TCGGTCCGTAGCTCCTCGGTTGGTTGGGCCTTTCTAGGTGTGGCGATTTCATCCCAAAGACTTAAGGCCCTCCCATGTCGGCCCTTGCTCTCTGCTGCTTGGGTCCTAGT
ATTTGGCATTACATTGAAAGACGAGGTTGCCTTCCTTGAAACTGTATCGTTTCGCAGCCTCAACCTCGACCCACTTGGTGAAGTAATCGATATTGACGAAGAGGCACCAG
AAGACATGGATATTGACGAAGTCCCTCCACGAACAAAGCGATACAAGGAATAG
Protein sequenceShow/hide protein sequence
MESLFKAYSNASDEDGEEEEHKPKRLALPSPPSNRPVPQPSKFQPKFRPLHCSDSSSEPQKGIMVPGRYVSKRERALLSSTPVSRAPESFLNPSVQSSIVFWGMMGLMET
GVSSLEEKMVEKQLGVEEKMDMKLVLECPNVQHVPDKDTLAKLKGLCFLEHHRTQHGYEISSRASCTNVTPFEKPPSQWLCTRPSHPCGIDRCTTVDPSSSSIKDAIPLM
SVRSSSVGWAFLGVAISSQRLKALPCRPLLSAAWVLVFGITLKDEVAFLETVSFRSLNLDPLGEVIDIDEEAPEDMDIDEVPPRTKRYKE