; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0018640 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0018640
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionWD repeat-containing protein 25
Genome locationchr5:31406111..31408441
RNA-Seq ExpressionLag0018640
SyntenyLag0018640
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR001680 - WD40 repeat
IPR015943 - WD40/YVTN repeat-like-containing domain superfamily
IPR016197 - Chromo-like domain superfamily
IPR019775 - WD40 repeat, conserved site
IPR036322 - WD40-repeat-containing domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046999.1 WD repeat-containing protein 25 isoform X2 [Cucumis melo var. makuwa]1.9e-11286.86Show/hide
Query:  GSLSDSDLPREILSLLRSRAKDYLQQGRMPKRMSVTLDCHTKPVNAVQWSPTHAHLLASAAMDHMICIWNVWSTEQKLAFKSSIHDAAVKDVQWSQQGLS
        GSLSDSDLPR+ILSLLRSR KDYLQQG MPKRMSVTLDCH K VN+VQWSP+HAHLLASAAMDH ICIWNVWST QKLA KSS H+AAVKDVQWSQQGLS
Subjt:  GSLSDSDLPREILSLLRSRAKDYLQQGRMPKRMSVTLDCHTKPVNAVQWSPTHAHLLASAAMDHMICIWNVWSTEQKLAFKSSIHDAAVKDVQWSQQGLS

Query:  ILSCGYDCASRLIDVEKGAEVGVFKEESGVAVVKFHPNNPSLFLSGGLKGSLQMWDMRIGKVVNKYNRRLGPILDVEFTPNSNQFISSSDVSASNSSESS
        +LSCGYDCASRLIDVEKG EVGVF+E+ GVAVVKFHPNNP+LFLSGGLKGSL+MWDMRIGK+VNKYNRRLG ILD+EFTPNSNQFISSSDVS SNSSESS
Subjt:  ILSCGYDCASRLIDVEKGAEVGVFKEESGVAVVKFHPNNPSLFLSGGLKGSLQMWDMRIGKVVNKYNRRLGPILDVEFTPNSNQFISSSDVSASNSSESS

Query:  IIVWDVTREVPLSYQACLV-PPFSSLQFSYVLSHLF
        IIVWDVTREVPLSYQACLV   FSSLQ S++  HLF
Subjt:  IIVWDVTREVPLSYQACLV-PPFSSLQFSYVLSHLF

KAG7031391.1 WD repeat-containing protein 25, partial [Cucurbita argyrosperma subsp. argyrosperma]1.5e-11481.68Show/hide
Query:  AKNDRGIVLGAYGSRANVLIRRMVVISFLLFGSLSDSDLPREILSLLRSRAKDYLQQGRMPKRMSVTLDCHTKPVNAVQWSPTHAHLLASAAMDHMICIW
        +K +R ++  A  SRA        V S  + GSLSDSDLPR+ILSLLRSRAK+YLQQG MPKRMSV+LDCHTK VNAVQWSP+HAHLLASAAMD+ ICIW
Subjt:  AKNDRGIVLGAYGSRANVLIRRMVVISFLLFGSLSDSDLPREILSLLRSRAKDYLQQGRMPKRMSVTLDCHTKPVNAVQWSPTHAHLLASAAMDHMICIW

Query:  NVWSTEQKLAFKSSIHDAAVKDVQWSQQGLSILSCGYDCASRLIDVEKGAEVGVFKEESGVAVVKFHPNNPSLFLSGGLKGSLQMWDMRIGKVVNKYNRR
        N+WSTEQKLAFKSSIHDAAVKDV+WSQQGLSILSCGYDC+SRLIDVE+G EVGVFKE+ GVAVVKFHPNNPSLFLSGGLKGSL+MWD+RIGKVVNKYNRR
Subjt:  NVWSTEQKLAFKSSIHDAAVKDVQWSQQGLSILSCGYDCASRLIDVEKGAEVGVFKEESGVAVVKFHPNNPSLFLSGGLKGSLQMWDMRIGKVVNKYNRR

Query:  LGPILDVEFTPNSNQFISSSDVSASNSSESSIIVWDVTREVPLSYQACLVPP-FSSLQFSYV
        LGPILDVEFTPN NQFISSSDVS+SNSSESS+IVWDVTREVPLSYQAC  PP FSSLQ S+V
Subjt:  LGPILDVEFTPNSNQFISSSDVSASNSSESSIIVWDVTREVPLSYQACLVPP-FSSLQFSYV

TYK04779.1 WD repeat-containing protein 25 isoform X2 [Cucumis melo var. makuwa]1.9e-11286.86Show/hide
Query:  GSLSDSDLPREILSLLRSRAKDYLQQGRMPKRMSVTLDCHTKPVNAVQWSPTHAHLLASAAMDHMICIWNVWSTEQKLAFKSSIHDAAVKDVQWSQQGLS
        GSLSDSDLPR+ILSLLRSR KDYLQQG MPKRMSVTLDCH K VN+VQWSP+HAHLLASAAMDH ICIWNVWST QKLA KSS H+AAVKDVQWSQQGLS
Subjt:  GSLSDSDLPREILSLLRSRAKDYLQQGRMPKRMSVTLDCHTKPVNAVQWSPTHAHLLASAAMDHMICIWNVWSTEQKLAFKSSIHDAAVKDVQWSQQGLS

Query:  ILSCGYDCASRLIDVEKGAEVGVFKEESGVAVVKFHPNNPSLFLSGGLKGSLQMWDMRIGKVVNKYNRRLGPILDVEFTPNSNQFISSSDVSASNSSESS
        +LSCGYDCASRLIDVEKG EVGVF+E+ GVAVVKFHPNNP+LFLSGGLKGSL+MWDMRIGK+VNKYNRRLG ILD+EFTPNSNQFISSSDVS SNSSESS
Subjt:  ILSCGYDCASRLIDVEKGAEVGVFKEESGVAVVKFHPNNPSLFLSGGLKGSLQMWDMRIGKVVNKYNRRLGPILDVEFTPNSNQFISSSDVSASNSSESS

Query:  IIVWDVTREVPLSYQACLV-PPFSSLQFSYVLSHLF
        IIVWDVTREVPLSYQACLV   FSSLQ S++  HLF
Subjt:  IIVWDVTREVPLSYQACLV-PPFSSLQFSYVLSHLF

XP_023526021.1 WD repeat-containing protein 25 [Cucurbita pepo subsp. pepo]1.3e-10881.71Show/hide
Query:  AKNDRGIVLGAYGSRANVLIRRMVVISFLLFGSLSDSDLPREILSLLRSRAKDYLQQGRMPKRMSVTLDCHTKPVNAVQWSPTHAHLLASAAMDHMICIW
        +K +R ++  A  SRA        V S  + GSLSDSDLPR+ILSLLRSRAK++LQQG MPKRMSV+LDCHTK VNAVQWSP+HAHLLASAAMD+ ICIW
Subjt:  AKNDRGIVLGAYGSRANVLIRRMVVISFLLFGSLSDSDLPREILSLLRSRAKDYLQQGRMPKRMSVTLDCHTKPVNAVQWSPTHAHLLASAAMDHMICIW

Query:  NVWSTEQKLAFKSSIHDAAVKDVQWSQQGLSILSCGYDCASRLIDVEKGAEVGVFKEESGVAVVKFHPNNPSLFLSGGLKGSLQMWDMRIGKVVNKYNRR
        N+WSTEQKLAFKSSIH+AAVKDV+WSQQGLS+LSCGYDC+SRLIDVEKG EVGVFKE+ GVAVVKFHPNNPSLFLSGGLKGSL+MWD+RIGKVVNKYNRR
Subjt:  NVWSTEQKLAFKSSIHDAAVKDVQWSQQGLSILSCGYDCASRLIDVEKGAEVGVFKEESGVAVVKFHPNNPSLFLSGGLKGSLQMWDMRIGKVVNKYNRR

Query:  LGPILDVEFTPNSNQFISSSDVSASNSSESSIIVWDVTREVPLSYQ
        LGPILDVEFTPN NQFISSSDVS+SNSSESS+IVWDVTREVPLSYQ
Subjt:  LGPILDVEFTPNSNQFISSSDVSASNSSESSIIVWDVTREVPLSYQ

XP_031738525.1 WD repeat-containing protein 25 isoform X4 [Cucumis sativus]9.7e-10985.84Show/hide
Query:  SRANVLIRRMVVISFLLFGSLSDSDLPREILSLLRSRAKDYLQQGRMPKRMSVTLDCHTKPVNAVQWSPTHAHLLASAAMDHMICIWNVWSTEQKLAFKS
        SR N L+ R   I     GSLSDSDLPR+ILSLLRSRAKDYLQQG MPKRMSV LDCH K VN+VQWSP+HAHLLASAAMDH ICIWNVWST QKLAFKS
Subjt:  SRANVLIRRMVVISFLLFGSLSDSDLPREILSLLRSRAKDYLQQGRMPKRMSVTLDCHTKPVNAVQWSPTHAHLLASAAMDHMICIWNVWSTEQKLAFKS

Query:  SIHDAAVKDVQWSQQGLSILSCGYDCASRLIDVEKGAEVGVFKEESGVAVVKFHPNNPSLFLSGGLKGSLQMWDMRIGKVVNKYNRRLGPILDVEFTPNS
        + H+AAVKDVQWSQQGLS+LSCGYDCASRLIDVEKG EVGVFKE+ GVAVVKFHPNNP+LFLSGGLKGSL+MWDMRIGK+VNKYNRRLGPILDVEFTPNS
Subjt:  SIHDAAVKDVQWSQQGLSILSCGYDCASRLIDVEKGAEVGVFKEESGVAVVKFHPNNPSLFLSGGLKGSLQMWDMRIGKVVNKYNRRLGPILDVEFTPNS

Query:  NQFISSSDVSASNSSESSIIVWDVTREVPLSYQ
        NQFISSSDVS SNSSESSII+WDVTREVPLSYQ
Subjt:  NQFISSSDVSASNSSESSIIVWDVTREVPLSYQ

TrEMBL top hitse value%identityAlignment
A0A1S4DZ03 WD repeat-containing protein 25 isoform X13.4e-10789.77Show/hide
Query:  GSLSDSDLPREILSLLRSRAKDYLQQGRMPKRMSVTLDCHTKPVNAVQWSPTHAHLLASAAMDHMICIWNVWSTEQKLAFKSSIHDAAVKDVQWSQQGLS
        GSLSDSDLPR+ILSLLRSR KDYLQQG MPKRMSVTLDCH K VN+VQWSP+HAHLLASAAMDH ICIWNVWST QKLA KSS H+AAVKDVQWSQQGLS
Subjt:  GSLSDSDLPREILSLLRSRAKDYLQQGRMPKRMSVTLDCHTKPVNAVQWSPTHAHLLASAAMDHMICIWNVWSTEQKLAFKSSIHDAAVKDVQWSQQGLS

Query:  ILSCGYDCASRLIDVEKGAEVGVFKEESGVAVVKFHPNNPSLFLSGGLKGSLQMWDMRIGKVVNKYNRRLGPILDVEFTPNSNQFISSSDVSASNSSESS
        +LSCGYDCASRLIDVEKG EVGVFKE+ GVAVVKFHPNNP+LFLSGGLKGSL+MWDMRIGK+VNKYNRRLG ILD+EFTPNSNQFISSSDVS SNSSESS
Subjt:  ILSCGYDCASRLIDVEKGAEVGVFKEESGVAVVKFHPNNPSLFLSGGLKGSLQMWDMRIGKVVNKYNRRLGPILDVEFTPNSNQFISSSDVSASNSSESS

Query:  IIVWDVTREVPLSYQ
        IIVWDVTREVPLSYQ
Subjt:  IIVWDVTREVPLSYQ

A0A5A7U0J5 WD repeat-containing protein 25 isoform X29.1e-11386.86Show/hide
Query:  GSLSDSDLPREILSLLRSRAKDYLQQGRMPKRMSVTLDCHTKPVNAVQWSPTHAHLLASAAMDHMICIWNVWSTEQKLAFKSSIHDAAVKDVQWSQQGLS
        GSLSDSDLPR+ILSLLRSR KDYLQQG MPKRMSVTLDCH K VN+VQWSP+HAHLLASAAMDH ICIWNVWST QKLA KSS H+AAVKDVQWSQQGLS
Subjt:  GSLSDSDLPREILSLLRSRAKDYLQQGRMPKRMSVTLDCHTKPVNAVQWSPTHAHLLASAAMDHMICIWNVWSTEQKLAFKSSIHDAAVKDVQWSQQGLS

Query:  ILSCGYDCASRLIDVEKGAEVGVFKEESGVAVVKFHPNNPSLFLSGGLKGSLQMWDMRIGKVVNKYNRRLGPILDVEFTPNSNQFISSSDVSASNSSESS
        +LSCGYDCASRLIDVEKG EVGVF+E+ GVAVVKFHPNNP+LFLSGGLKGSL+MWDMRIGK+VNKYNRRLG ILD+EFTPNSNQFISSSDVS SNSSESS
Subjt:  ILSCGYDCASRLIDVEKGAEVGVFKEESGVAVVKFHPNNPSLFLSGGLKGSLQMWDMRIGKVVNKYNRRLGPILDVEFTPNSNQFISSSDVSASNSSESS

Query:  IIVWDVTREVPLSYQACLV-PPFSSLQFSYVLSHLF
        IIVWDVTREVPLSYQACLV   FSSLQ S++  HLF
Subjt:  IIVWDVTREVPLSYQACLV-PPFSSLQFSYVLSHLF

A0A5D3C311 WD repeat-containing protein 25 isoform X29.1e-11386.86Show/hide
Query:  GSLSDSDLPREILSLLRSRAKDYLQQGRMPKRMSVTLDCHTKPVNAVQWSPTHAHLLASAAMDHMICIWNVWSTEQKLAFKSSIHDAAVKDVQWSQQGLS
        GSLSDSDLPR+ILSLLRSR KDYLQQG MPKRMSVTLDCH K VN+VQWSP+HAHLLASAAMDH ICIWNVWST QKLA KSS H+AAVKDVQWSQQGLS
Subjt:  GSLSDSDLPREILSLLRSRAKDYLQQGRMPKRMSVTLDCHTKPVNAVQWSPTHAHLLASAAMDHMICIWNVWSTEQKLAFKSSIHDAAVKDVQWSQQGLS

Query:  ILSCGYDCASRLIDVEKGAEVGVFKEESGVAVVKFHPNNPSLFLSGGLKGSLQMWDMRIGKVVNKYNRRLGPILDVEFTPNSNQFISSSDVSASNSSESS
        +LSCGYDCASRLIDVEKG EVGVF+E+ GVAVVKFHPNNP+LFLSGGLKGSL+MWDMRIGK+VNKYNRRLG ILD+EFTPNSNQFISSSDVS SNSSESS
Subjt:  ILSCGYDCASRLIDVEKGAEVGVFKEESGVAVVKFHPNNPSLFLSGGLKGSLQMWDMRIGKVVNKYNRRLGPILDVEFTPNSNQFISSSDVSASNSSESS

Query:  IIVWDVTREVPLSYQACLV-PPFSSLQFSYVLSHLF
        IIVWDVTREVPLSYQACLV   FSSLQ S++  HLF
Subjt:  IIVWDVTREVPLSYQACLV-PPFSSLQFSYVLSHLF

A0A6J1FN47 WD repeat-containing protein 258.0e-10981.71Show/hide
Query:  AKNDRGIVLGAYGSRANVLIRRMVVISFLLFGSLSDSDLPREILSLLRSRAKDYLQQGRMPKRMSVTLDCHTKPVNAVQWSPTHAHLLASAAMDHMICIW
        +K +R ++  A  SRA        V S  + GSLSDSDLPR+ILSLLRSRAK+YLQQG MPKRMSV+LDCHTK VNAVQWSP+HAHLLASAAMD+ ICIW
Subjt:  AKNDRGIVLGAYGSRANVLIRRMVVISFLLFGSLSDSDLPREILSLLRSRAKDYLQQGRMPKRMSVTLDCHTKPVNAVQWSPTHAHLLASAAMDHMICIW

Query:  NVWSTEQKLAFKSSIHDAAVKDVQWSQQGLSILSCGYDCASRLIDVEKGAEVGVFKEESGVAVVKFHPNNPSLFLSGGLKGSLQMWDMRIGKVVNKYNRR
        N+WSTEQKLAFKSSIH+AAVKDV+WSQQGLSILSCGYDC+SRLIDVEKG EVG+FKE+ GVAVVKFHPNNPS+FLSGGLKGSL+MWD+RIGKVVNKYNRR
Subjt:  NVWSTEQKLAFKSSIHDAAVKDVQWSQQGLSILSCGYDCASRLIDVEKGAEVGVFKEESGVAVVKFHPNNPSLFLSGGLKGSLQMWDMRIGKVVNKYNRR

Query:  LGPILDVEFTPNSNQFISSSDVSASNSSESSIIVWDVTREVPLSYQ
        LGPILDVEFTPN NQFISSSDVS+SNSSESS+IVWDVTREVPLSYQ
Subjt:  LGPILDVEFTPNSNQFISSSDVSASNSSESSIIVWDVTREVPLSYQ

A0A6J1JQD9 WD repeat-containing protein 251.4e-10881.3Show/hide
Query:  AKNDRGIVLGAYGSRANVLIRRMVVISFLLFGSLSDSDLPREILSLLRSRAKDYLQQGRMPKRMSVTLDCHTKPVNAVQWSPTHAHLLASAAMDHMICIW
        +K +R ++  A  SRA        V  F   GSLSDSDLPR+ILSLLRSRAK+YLQQG MPKRMSV+LDCHTK VNAVQWSP+HAHLLASAAMD+ ICIW
Subjt:  AKNDRGIVLGAYGSRANVLIRRMVVISFLLFGSLSDSDLPREILSLLRSRAKDYLQQGRMPKRMSVTLDCHTKPVNAVQWSPTHAHLLASAAMDHMICIW

Query:  NVWSTEQKLAFKSSIHDAAVKDVQWSQQGLSILSCGYDCASRLIDVEKGAEVGVFKEESGVAVVKFHPNNPSLFLSGGLKGSLQMWDMRIGKVVNKYNRR
        N+WSTEQKLAFKSSIH+AAVKDV+WSQQGLSILSCGYDC+SRLIDVEKG E+GVFKE+ GVAVVKFHPN+PSLFLSGG+KGSL+MWD+RIGKVVNKYNRR
Subjt:  NVWSTEQKLAFKSSIHDAAVKDVQWSQQGLSILSCGYDCASRLIDVEKGAEVGVFKEESGVAVVKFHPNNPSLFLSGGLKGSLQMWDMRIGKVVNKYNRR

Query:  LGPILDVEFTPNSNQFISSSDVSASNSSESSIIVWDVTREVPLSYQ
        LGPILDVEFTPN NQFISSSDVS+SNSSESS+IVWDVTREVPLSYQ
Subjt:  LGPILDVEFTPNSNQFISSSDVSASNSSESSIIVWDVTREVPLSYQ

SwissProt top hitse value%identityAlignment
E9Q349 WD repeat-containing protein 253.2e-3037.04Show/hide
Query:  MPKRMSVTLDCHTKPVNAVQWSPT--HAHLLASAAMDHMICIWNVWSTEQKLAFKSSIHDAAVKDVQWSQQGLSILSCGYDCASRLIDVEKGAEVGVFKE
        +PK++   L  H  PVN++QW P    +H+L SA+MD    +WN   +   L    S+H  AV+  +WS  G  ILS G+D A  L D+E G +V   + 
Subjt:  MPKRMSVTLDCHTKPVNAVQWSPT--HAHLLASAAMDHMICIWNVWSTEQKLAFKSSIHDAAVKDVQWSQQGLSILSCGYDCASRLIDVEKGAEVGVFKE

Query:  ESGVAVVKFHPNNPSLFLSGGLKGSLQMWDMRIGKVVNKYNRRLGPILDVEFTPNSNQFISSSDVSASNSSESSIIVWDVTREVPLSYQ
        +  V  +KFHP + ++FL GG    ++ WDMR GKVV  Y   +   LD+ F    ++F+SS+D S  +S++ +II WD      +S Q
Subjt:  ESGVAVVKFHPNNPSLFLSGGLKGSLQMWDMRIGKVVNKYNRRLGPILDVEFTPNSNQFISSSDVSASNSSESSIIVWDVTREVPLSYQ

O43071 Pre-mRNA-processing factor 173.3e-1930.53Show/hide
Query:  MPKRMSVTLDCHTKPVNAVQWSPTHAHLLASAAMDHMICIWNVWSTEQKLAFKSSIHDAAVKDVQWSQQGLSILSCGYDCASRLIDVEKGAEVGVFKEES
        +PK+   T   HTK ++ +++ P   HLL S +MD+ I IW V+  ++ L      H   ++D+ +SQ G S LS  +D   +L D E G  +  F  + 
Subjt:  MPKRMSVTLDCHTKPVNAVQWSPTHAHLLASAAMDHMICIWNVWSTEQKLAFKSSIHDAAVKDVQWSQQGLSILSCGYDCASRLIDVEKGAEVGVFKEES

Query:  GVAVVKFH--PNNPSLFLSGGLKGSLQMWDMRIGKVVNKYNRRLGPILDVEFTPNSNQFISSSDVSASNSSESSIIVWDVTREVPLSYQA
            VKF   P+ P+ FL+G     +  +D+R   +V  Y+  LG I  + F  N  +F+++SD       +SS+  W+    VP+ + A
Subjt:  GVAVVKFH--PNNPSLFLSGGLKGSLQMWDMRIGKVVNKYNRRLGPILDVEFTPNSNQFISSSDVSASNSSESSIIVWDVTREVPLSYQA

O60508 Pre-mRNA-processing factor 171.5e-1930.15Show/hide
Query:  MPKRMSVTLDCHTKPVNAVQWSPTHAHLLASAAMDHMICIWNVWSTEQKLAFKSSIHDAAVKDVQWSQQGLSILSCGYDCASRLIDVEKGAEVGVFKEES
        +PK+       HTK V+AV+  P   HLL S +MD  I +W V+  E++       H  AV+D+ ++  G   LS  YD   +L D E G  +  F    
Subjt:  MPKRMSVTLDCHTKPVNAVQWSPTHAHLLASAAMDHMICIWNVWSTEQKLAFKSSIHDAAVKDVQWSQQGLSILSCGYDCASRLIDVEKGAEVGVFKEES

Query:  GVAVVKFHP--NNPSLFLSGGLKGSLQMWDMRIGKVVNKYNRRLGPILDVEFTPNSNQFISSSDVSASNSSESSIIVWDVTREVPLSYQACLVPPFSSL
            VKF+P  +  +LF++G     +  WD+R G++V +Y+R LG +  + F   + +F+S+SD       + S+ VW+   ++P+ ++    P   S+
Subjt:  GVAVVKFHP--NNPSLFLSGGLKGSLQMWDMRIGKVVNKYNRRLGPILDVEFTPNSNQFISSSDVSASNSSESSIIVWDVTREVPLSYQACLVPPFSSL

Q64LD2 WD repeat-containing protein 253.0e-2832.31Show/hide
Query:  YLQQGRMPKRMSVTLDCHTKPVNAVQWSP--THAHLLASAAMDHMICIWNVWSTEQKLAFKSSIHDAAVKDVQWSQQGLSILSCGYDCASRLIDVEKGAE
        + ++  +P+++   L  H  PVN +QW P  + +H+L S +MD    +WN   +   L    S+H  AV+  +W+  G  ILS G+D A  L D+E G +
Subjt:  YLQQGRMPKRMSVTLDCHTKPVNAVQWSP--THAHLLASAAMDHMICIWNVWSTEQKLAFKSSIHDAAVKDVQWSQQGLSILSCGYDCASRLIDVEKGAE

Query:  VGVFKEESGVAVVKFHPNNPSLFLSGGLKGSLQMWDMRIGKVVNKYNRRLGPILDVEFTPNSNQFISSSDVSASNSSESSIIVWDVTREVPLSYQ
        +   + +  +  +KFHP + ++FL GG    ++ WD+R GKV+  Y   +   LD+ F    ++F+SS+D S  +S++ +II WD      +S Q
Subjt:  VGVFKEESGVAVVKFHPNNPSLFLSGGLKGSLQMWDMRIGKVVNKYNRRLGPILDVEFTPNSNQFISSSDVSASNSSESSIIVWDVTREVPLSYQ

Q9DC48 Pre-mRNA-processing factor 171.9e-1929.09Show/hide
Query:  LPREILSLLRSRAKDYLQQGRMPKRMSVTLDCHTKPVNAVQWSPTHAHLLASAAMDHMICIWNVWSTEQKLAFKSSIHDAAVKDVQWSQQGLSILSCGYD
        +P+++   LRS      ++  +PK+       HTK V+AV+  P   HLL S +MD  I +W V+   + L      H  AV+D+ ++  G   LS  YD
Subjt:  LPREILSLLRSRAKDYLQQGRMPKRMSVTLDCHTKPVNAVQWSPTHAHLLASAAMDHMICIWNVWSTEQKLAFKSSIHDAAVKDVQWSQQGLSILSCGYD

Query:  CASRLIDVEKGAEVGVFKEESGVAVVKFHP--NNPSLFLSGGLKGSLQMWDMRIGKVVNKYNRRLGPILDVEFTPNSNQFISSSDVSASNSSESSIIVWD
           +L D E G  +  F        VKF+P  +  +LF++G     +  WD+R G++V +Y+R LG +  + F   + +F+S+SD       + S+ VW+
Subjt:  CASRLIDVEKGAEVGVFKEESGVAVVKFHP--NNPSLFLSGGLKGSLQMWDMRIGKVVNKYNRRLGPILDVEFTPNSNQFISSSDVSASNSSESSIIVWD

Query:  VTREVPLSYQACLVPPFSSL
           ++P+ ++    P   S+
Subjt:  VTREVPLSYQACLVPPFSSL

Arabidopsis top hitse value%identityAlignment
AT1G10580.1 Transducin/WD40 repeat-like superfamily protein9.6e-2230.85Show/hide
Query:  MPKRMSVTLDCHTKPVNAVQWSPTHAHLLASAAMDHMICIWNVWSTEQKLAFKSSIHDAAVKDVQWSQQGLSILSCGYDCASRLIDVEKGAEVGVFKEES
        +PKR+  T   HTK V+A+++ P   HLL SA MD  + IW+V+++ + +      H  AV+D+ +S  G   L+ GYD   +  D E G  +  F    
Subjt:  MPKRMSVTLDCHTKPVNAVQWSPTHAHLLASAAMDHMICIWNVWSTEQKLAFKSSIHDAAVKDVQWSQQGLSILSCGYDCASRLIDVEKGAEVGVFKEES

Query:  GVAVVKFHPNN--PSLFLSGGLKGSLQMWDMRIGKVVNKYNRRLGPILDVEFTPNSNQFISSSDVSASNSSESSIIVWDVTREVPLSY
           VVK +P++   ++ L+G     +  WD+  G+V  +Y++ LG +  + F  N+ +F++SSD       + S+ VW+    V + Y
Subjt:  GVAVVKFHPNN--PSLFLSGGLKGSLQMWDMRIGKVVNKYNRRLGPILDVEFTPNSNQFISSSDVSASNSSESSIIVWDVTREVPLSY

AT1G11160.1 Transducin/WD40 repeat-like superfamily protein4.2e-0924.4Show/hide
Query:  HTKPVNAVQWSPTHAHLLASAAMDHMICIWNVWSTEQKLAFKSSIHDAAVKDVQWSQQGLSILSCGYDCASRLIDVEKGAEVGVFKEES-GVAVVKFHPN
        HT PV++V ++     +LA A+   +I +W++  ++   AF    H +    V++   G  + S   D   R+ D  K   +  +K  + G++ ++F P+
Subjt:  HTKPVNAVQWSPTHAHLLASAAMDHMICIWNVWSTEQKLAFKSSIHDAAVKDVQWSQQGLSILSCGYDCASRLIDVEKGAEVGVFKEES-GVAVVKFHPN

Query:  NPSLFLSGGLKGSLQMWDMRIGKVVNKYNRRLGPILDVEFTPNSNQFISSSDVSASNSSESSIIVWDV
             +SGGL   +++WD+  GK+++++    GPI  ++F P          + A+ S++ ++  WD+
Subjt:  NPSLFLSGGLKGSLQMWDMRIGKVVNKYNRRLGPILDVEFTPNSNQFISSSDVSASNSSESSIIVWDV

AT1G61210.1 Transducin/WD40 repeat-like superfamily protein5.4e-0924.4Show/hide
Query:  HTKPVNAVQWSPTHAHLLASAAMDHMICIWNVWSTEQKLAFKSSIHDAAVKDVQWSQQGLSILSCGYDCASRLIDVEKGAEVGVFKEES-GVAVVKFHPN
        HT  V++V +      +LA A+   +I +W+V   +   AF    H +    V++   G  + S   D   ++ D+ K   +  +K  S G++ ++F P+
Subjt:  HTKPVNAVQWSPTHAHLLASAAMDHMICIWNVWSTEQKLAFKSSIHDAAVKDVQWSQQGLSILSCGYDCASRLIDVEKGAEVGVFKEES-GVAVVKFHPN

Query:  NPSLFLSGGLKGSLQMWDMRIGKVVNKYNRRLGPILDVEFTPNSNQFISSSDVSASNSSESSIIVWDV
             +SGGL   +++WD+  GK+++++    GPI  ++F P          + A+ S++ ++  WD+
Subjt:  NPSLFLSGGLKGSLQMWDMRIGKVVNKYNRRLGPILDVEFTPNSNQFISSSDVSASNSSESSIIVWDV

AT5G54520.1 Transducin/WD40 repeat-like superfamily protein1.1e-7058.53Show/hide
Query:  LFGSLSDSDLPREILSLLRSRAKDYLQQGRMPKRMSVTLDCHTKPVNAVQWSPTHAHLLASAAMDHMICIWNVWSTEQKLAFKSSIHDAAVKDVQWSQQG
        + GS+SDSD+PR +LS +R R K    Q  MP RMS++L  HTK V A+ WS +H HLLASA +D  + +WNVWS ++K       H+A VKDV+WS+QG
Subjt:  LFGSLSDSDLPREILSLLRSRAKDYLQQGRMPKRMSVTLDCHTKPVNAVQWSPTHAHLLASAAMDHMICIWNVWSTEQKLAFKSSIHDAAVKDVQWSQQG

Query:  LSILSCGYDCASRLIDVEKGAEVGVFKEESGVAVVKFHPNNPSLFLSGGLKGSLQMWDMRIGKVVNKYNRRLGPILDVEFTPNSNQFISSSDVSASNSSE
        LS+LSCGYDC SRL DVE+G E   FKE+  V VVKFHP+N ++FLSGG KGSL++WD+R  K V++Y R LGPILDVEF     QFISSSDVS  N SE
Subjt:  LSILSCGYDCASRLIDVEKGAEVGVFKEESGVAVVKFHPNNPSLFLSGGLKGSLQMWDMRIGKVVNKYNRRLGPILDVEFTPNSNQFISSSDVSASNSSE

Query:  SSIIVWDVTREVPLSYQ
        +++IVWD++REVPLS Q
Subjt:  SSIIVWDVTREVPLSYQ

AT5G67320.1 WD-40 repeat family protein1.7e-1021.66Show/hide
Query:  RRGKMVKEDQTRKITEMVWGPAKNDRGIVLGAYGSRANVLIRRMVVISFLLFGSLSDSDLPREILSLLRSRAKDYLQQGRMPKRMSV----------TLD
        +  K    ++++ +T + W    N  G +L            R+  ++  L  +LS    P  I SL  ++  DYL  G + +   V            +
Subjt:  RRGKMVKEDQTRKITEMVWGPAKNDRGIVLGAYGSRANVLIRRMVVISFLLFGSLSDSDLPREILSLLRSRAKDYLQQGRMPKRMSV----------TLD

Query:  CHTKPVNAVQWSPTHAHLLASAAMDHMICIWNVWSTEQKLAFKSSIHDAAVKDVQWSQQGLSILSCGYDCASRLIDVEKGAEVGVFKEES-GVAVVKFHP
         H+ P   V W    +   A+++ D MI +  +  T     F    H   V  V+W   G  + SC  D  +++ ++++   V   +E +  +  +++ P
Subjt:  CHTKPVNAVQWSPTHAHLLASAAMDHMICIWNVWSTEQKLAFKSSIHDAAVKDVQWSQQGLSILSCGYDCASRLIDVEKGAEVGVFKEES-GVAVVKFHP

Query:  -----NNPSLFL---SGGLKGSLQMWDMRIGKVVNKYNRRLGPILDVEFTPNSNQFISSSDVSASNSSESSIIVWDV
             NNP+  L   S     ++++WD  +GK++  +N    P+  + F+PN        +  AS S + SI +W +
Subjt:  -----NNPSLFL---SGGLKGSLQMWDMRIGKVVNKYNRRLGPILDVEFTPNSNQFISSSDVSASNSSESSIIVWDV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAATGGAACGATGAGGAAGATCGAGAGGACTGGTTGGTGAAATGGGTAGATAAACCTTATTGTGATGCCACATGGGAAGCGGCTGAGGTTATTCAACAGCAGTTTCC
AGATTTCCACCTTGAGGACAAGGTGAGTCTTCCAGCTGGGGGTATTGTGAGACCTCCAATTATAAAAACGTATGAAAGAAGGGGCAAAATGGTCAAGGAGGACCAAACAA
GAAAGATAACAGAAATGGTGTGGGGACCAGCAAAGAATGATCGTGGGATCGTGTTAGGGGCGTACGGGAGCAGAGCCAATGTCCTTATTAGGAGGATGGTTGTCATTTCG
TTTCTTTTATTTGGAAGTCTTTCGGATTCTGACCTTCCACGTGAGATCCTGTCATTATTGAGAAGTAGAGCTAAAGACTATTTGCAGCAAGGCCGGATGCCTAAAAGGAT
GTCTGTAACTCTTGATTGCCATACAAAACCCGTCAATGCAGTTCAATGGTCGCCAACACATGCTCATCTCCTTGCTTCTGCTGCTATGGATCACATGATCTGCATATGGA
ACGTATGGAGCACAGAGCAGAAGCTAGCATTCAAGTCAAGCATTCACGACGCTGCAGTTAAAGATGTTCAATGGTCACAACAAGGATTATCTATTCTTTCTTGTGGATAT
GATTGTGCTTCAAGATTGATTGATGTTGAGAAGGGGGCAGAAGTTGGAGTATTCAAGGAGGAATCAGGAGTTGCTGTTGTAAAGTTCCATCCTAACAACCCAAGTCTCTT
CCTTTCCGGTGGACTGAAAGGTAGCCTCCAAATGTGGGATATGAGAATTGGAAAAGTGGTTAACAAATACAACCGACGTCTTGGTCCAATTCTTGATGTTGAATTTACTC
CCAATAGCAATCAATTCATCTCTTCCAGCGATGTTTCTGCAAGCAATAGCAGTGAAAGCTCTATCATCGTTTGGGATGTCACAAGAGAAGTTCCGCTTTCATATCAGGCA
TGTCTTGTTCCACCTTTTTCATCACTACAATTTTCATATGTCCTCTCCCATTTATTTGCATAA
mRNA sequenceShow/hide mRNA sequence
ATGAAATGGAACGATGAGGAAGATCGAGAGGACTGGTTGGTGAAATGGGTAGATAAACCTTATTGTGATGCCACATGGGAAGCGGCTGAGGTTATTCAACAGCAGTTTCC
AGATTTCCACCTTGAGGACAAGGTGAGTCTTCCAGCTGGGGGTATTGTGAGACCTCCAATTATAAAAACGTATGAAAGAAGGGGCAAAATGGTCAAGGAGGACCAAACAA
GAAAGATAACAGAAATGGTGTGGGGACCAGCAAAGAATGATCGTGGGATCGTGTTAGGGGCGTACGGGAGCAGAGCCAATGTCCTTATTAGGAGGATGGTTGTCATTTCG
TTTCTTTTATTTGGAAGTCTTTCGGATTCTGACCTTCCACGTGAGATCCTGTCATTATTGAGAAGTAGAGCTAAAGACTATTTGCAGCAAGGCCGGATGCCTAAAAGGAT
GTCTGTAACTCTTGATTGCCATACAAAACCCGTCAATGCAGTTCAATGGTCGCCAACACATGCTCATCTCCTTGCTTCTGCTGCTATGGATCACATGATCTGCATATGGA
ACGTATGGAGCACAGAGCAGAAGCTAGCATTCAAGTCAAGCATTCACGACGCTGCAGTTAAAGATGTTCAATGGTCACAACAAGGATTATCTATTCTTTCTTGTGGATAT
GATTGTGCTTCAAGATTGATTGATGTTGAGAAGGGGGCAGAAGTTGGAGTATTCAAGGAGGAATCAGGAGTTGCTGTTGTAAAGTTCCATCCTAACAACCCAAGTCTCTT
CCTTTCCGGTGGACTGAAAGGTAGCCTCCAAATGTGGGATATGAGAATTGGAAAAGTGGTTAACAAATACAACCGACGTCTTGGTCCAATTCTTGATGTTGAATTTACTC
CCAATAGCAATCAATTCATCTCTTCCAGCGATGTTTCTGCAAGCAATAGCAGTGAAAGCTCTATCATCGTTTGGGATGTCACAAGAGAAGTTCCGCTTTCATATCAGGCA
TGTCTTGTTCCACCTTTTTCATCACTACAATTTTCATATGTCCTCTCCCATTTATTTGCATAA
Protein sequenceShow/hide protein sequence
MKWNDEEDREDWLVKWVDKPYCDATWEAAEVIQQQFPDFHLEDKVSLPAGGIVRPPIIKTYERRGKMVKEDQTRKITEMVWGPAKNDRGIVLGAYGSRANVLIRRMVVIS
FLLFGSLSDSDLPREILSLLRSRAKDYLQQGRMPKRMSVTLDCHTKPVNAVQWSPTHAHLLASAAMDHMICIWNVWSTEQKLAFKSSIHDAAVKDVQWSQQGLSILSCGY
DCASRLIDVEKGAEVGVFKEESGVAVVKFHPNNPSLFLSGGLKGSLQMWDMRIGKVVNKYNRRLGPILDVEFTPNSNQFISSSDVSASNSSESSIIVWDVTREVPLSYQA
CLVPPFSSLQFSYVLSHLFA