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Lag0018652 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0018652
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr5:31718948..31719505
RNA-Seq ExpressionLag0018652
SyntenyLag0018652
Gene Ontology termsNA
InterPro domainsIPR036691 - Endonuclease/exonuclease/phosphatase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_030923017.1 uncharacterized protein LOC115949892 [Quercus lobata]3.5e-4146.82Show/hide
Query:  METKLQYSGGDRVRRDLQFDCGLVVPTVGQSGGLLLLWQNETNVSIRSYSKGHIDAMV-CDTTDCWRFSGIYGNPQRDKHHETWALIDRLGEANSIPWVL
        MET+ + S  +R+R  L+FD   +VP     GGL LLW N+ N+ IR++S  HIDA+V     D WRF+G YG P+     ++W+++  LG    +PWV 
Subjt:  METKLQYSGGDRVRRDLQFDCGLVVPTVGQSGGLLLLWQNETNVSIRSYSKGHIDAMV-CDTTDCWRFSGIYGNPQRDKHHETWALIDRLGEANSIPWVL

Query:  GGDFNEITSIDEKRGGPNRIERDMQKFRDCIDGCGLCDVGFIGPAFTWCNNHYQSEMIWERLDRFLVNSEMLL
         GDFNEIT +DEK GG  R E+ MQ FRDC+D CGL D+GF G  FTWCN  Y   ++W RLDR +  ++ +L
Subjt:  GGDFNEITSIDEKRGGPNRIERDMQKFRDCIDGCGLCDVGFIGPAFTWCNNHYQSEMIWERLDRFLVNSEMLL

XP_030924992.1 uncharacterized protein LOC115952038 [Quercus lobata]4.1e-4247.13Show/hide
Query:  METKLQYSGGDRVRRDLQFDCGLVVPTVGQSGGLLLLWQNETNVSIRSYSKGHIDAMVCD-TTDCWRFSGIYGNPQRDKHHETWALIDRLGEANSIPWVL
        METK   S  +++R  L+FD   +VP    SGGL L W NE ++ IR++S  HIDA+V     D WRF+G YG P+     ++W L+  L    S+PWV 
Subjt:  METKLQYSGGDRVRRDLQFDCGLVVPTVGQSGGLLLLWQNETNVSIRSYSKGHIDAMVCD-TTDCWRFSGIYGNPQRDKHHETWALIDRLGEANSIPWVL

Query:  GGDFNEITSIDEKRGGPNRIERDMQKFRDCIDGCGLCDVGFIGPAFTWCNNHYQSEMIWERLDRFLVNSEMLLI
         GDFNEIT ++EK GGP R ++ MQ FRDC+D CG  D+GF G  FTWCNN +   ++W RLDR + ++E LL+
Subjt:  GGDFNEITSIDEKRGGPNRIERDMQKFRDCIDGCGLCDVGFIGPAFTWCNNHYQSEMIWERLDRFLVNSEMLLI

XP_030940268.1 uncharacterized protein LOC115965235 [Quercus lobata]1.5e-3947.24Show/hide
Query:  DRVRRDLQFDCGLVVPTVGQSGGLLLLWQNETNVSIRSYSKGHIDAMVCD-TTDCWRFSGIYGNPQRDKHHETWALIDRLGEANSIPWVLGGDFNEITSI
        +++R  L+FD   +VP    SGGL L W N+ ++ IR++S  HIDA+V     D WRF+G YG P+     ++W+L+  L     +PWV  GDFNEITS+
Subjt:  DRVRRDLQFDCGLVVPTVGQSGGLLLLWQNETNVSIRSYSKGHIDAMVCD-TTDCWRFSGIYGNPQRDKHHETWALIDRLGEANSIPWVLGGDFNEITSI

Query:  DEKRGGPNRIERDMQKFRDCIDGCGLCDVGFIGPAFTWCNNHYQSEMIWERLDRFLVNSEMLL
        DEK GG  R +R MQ FRDC+D CG  D+GF G  FTWCNN +   ++W RLDR L ++E +L
Subjt:  DEKRGGPNRIERDMQKFRDCIDGCGLCDVGFIGPAFTWCNNHYQSEMIWERLDRFLVNSEMLL

XP_030970102.1 uncharacterized protein LOC115990406 [Quercus lobata]3.9e-4046.24Show/hide
Query:  METKLQYSGGDRVRRDLQFDCGLVVPTVGQSGGLLLLWQNETNVSIRSYSKGHIDAMVCD-TTDCWRFSGIYGNPQRDKHHETWALIDRLGEANSIPWVL
        MET+ + S  +R+R  L+FD   +VP      GL LLW N+ N+ IR++S  HIDA+V     D WRF+G YG P+     ++W+++  LG    +PWV 
Subjt:  METKLQYSGGDRVRRDLQFDCGLVVPTVGQSGGLLLLWQNETNVSIRSYSKGHIDAMVCD-TTDCWRFSGIYGNPQRDKHHETWALIDRLGEANSIPWVL

Query:  GGDFNEITSIDEKRGGPNRIERDMQKFRDCIDGCGLCDVGFIGPAFTWCNNHYQSEMIWERLDRFLVNSEMLL
         GDFNEIT +DEK GG  R E+ MQ FRDC+D CGL D+GF G  FTWCN  Y   ++W RLDR +   + +L
Subjt:  GGDFNEITSIDEKRGGPNRIERDMQKFRDCIDGCGLCDVGFIGPAFTWCNNHYQSEMIWERLDRFLVNSEMLL

XP_042988712.1 uncharacterized protein LOC122316247 [Carya illinoinensis]1.7e-4046.43Show/hide
Query:  ETKLQYSGGDRVRRDLQFDCGLVVPTVGQSGGLLLLWQNETNVSIRSYSKGHIDAMV--CDTTDCWRFSGIYGNPQRDKHHETWALIDRLGEANSIPWVL
        ETKL  +  + V+R L ++C   V + G+SGGL L+WQ ETN++++SYSK HIDA++   +    W+F+G+YG+P  +   ETW  I  L    S+PW++
Subjt:  ETKLQYSGGDRVRRDLQFDCGLVVPTVGQSGGLLLLWQNETNVSIRSYSKGHIDAMV--CDTTDCWRFSGIYGNPQRDKHHETWALIDRLGEANSIPWVL

Query:  GGDFNEITSIDEKRGGPNRIERDMQKFRDCIDGCGLCDVGFIGPAFTWCNNHYQSEMIWERLDRFLVN
         GDFNE+    EKRGG NR ER M+ FR  +D C   D+GF+GP FTWCN       + ERLDR+L N
Subjt:  GGDFNEITSIDEKRGGPNRIERDMQKFRDCIDGCGLCDVGFIGPAFTWCNNHYQSEMIWERLDRFLVN

TrEMBL top hitse value%identityAlignment
A0A2N9F204 Uncharacterized protein1.4e-4048.47Show/hide
Query:  DRVRRDLQFDCGLVVPTVGQSGGLLLLWQNETNVSIRSYSKGHIDAMVCDTT-DCWRFSGIYGNPQRDKHHETWALIDRLGEANSIPWVLGGDFNEITSI
        +R+R  L FD   V  +  + GGL LLW++ TN+ + S+S  HIDA+V D T + WRF+G YG P+  K  E+WAL+ RL   +++PW   GDFNE+  +
Subjt:  DRVRRDLQFDCGLVVPTVGQSGGLLLLWQNETNVSIRSYSKGHIDAMVCDTT-DCWRFSGIYGNPQRDKHHETWALIDRLGEANSIPWVLGGDFNEITSI

Query:  DEKRGGPNRIERDMQKFRDCIDGCGLCDVGFIGPAFTWCNNHYQSEMIWERLDRFLVNSEMLL
        +EK+G  NR ER MQ FRD +D CG  D+GF GP FTW NN    +M WERLDR +   E LL
Subjt:  DEKRGGPNRIERDMQKFRDCIDGCGLCDVGFIGPAFTWCNNHYQSEMIWERLDRFLVNSEMLL

A0A2N9GY38 Reverse transcriptase domain-containing protein1.4e-4048.47Show/hide
Query:  DRVRRDLQFDCGLVVPTVGQSGGLLLLWQNETNVSIRSYSKGHIDAMVCDTT-DCWRFSGIYGNPQRDKHHETWALIDRLGEANSIPWVLGGDFNEITSI
        +R+R  L FD   V  +  + GGL LLW++ TN+ + S+S  HIDA+V D T + WRF+G YG P+  K  E+WAL+ RL   +++PW   GDFNE+  +
Subjt:  DRVRRDLQFDCGLVVPTVGQSGGLLLLWQNETNVSIRSYSKGHIDAMVCDTT-DCWRFSGIYGNPQRDKHHETWALIDRLGEANSIPWVLGGDFNEITSI

Query:  DEKRGGPNRIERDMQKFRDCIDGCGLCDVGFIGPAFTWCNNHYQSEMIWERLDRFLVNSEMLL
        +EK+G  NR ER MQ FRD +D CG  D+GF GP FTW NN    +M WERLDR +   E LL
Subjt:  DEKRGGPNRIERDMQKFRDCIDGCGLCDVGFIGPAFTWCNNHYQSEMIWERLDRFLVNSEMLL

A0A2N9H1U1 Reverse transcriptase domain-containing protein2.2e-4149.4Show/hide
Query:  METKLQYSGGDRVRRDLQFDCGLVVPTVGQSGGLLLLWQNETNVSIRSYSKGHIDAMVCD-TTDCWRFSGIYGNPQRDKHHETWALIDRLGEANSIPWVL
        +ET L  +  + +R  L F   LVV    Q GGL L W+ E NV+I+SYS  HID ++ +   D WRF+G YG P+  + H +WAL+  L +  S+PW+ 
Subjt:  METKLQYSGGDRVRRDLQFDCGLVVPTVGQSGGLLLLWQNETNVSIRSYSKGHIDAMVCD-TTDCWRFSGIYGNPQRDKHHETWALIDRLGEANSIPWVL

Query:  GGDFNEITSIDEKRGGPNRIERDMQKFRDCIDGCGLCDVGFIGPAFTWCNNHYQSEMIWERLDRFL
         GDFNE+ S+DEK+GGP R  R MQ FRD ID CG  D+G+ GP FTWCNN   S  +WERLDR L
Subjt:  GGDFNEITSIDEKRGGPNRIERDMQKFRDCIDGCGLCDVGFIGPAFTWCNNHYQSEMIWERLDRFL

A0A2N9HW04 Reverse transcriptase domain-containing protein2.2e-4149.4Show/hide
Query:  METKLQYSGGDRVRRDLQFDCGLVVPTVGQSGGLLLLWQNETNVSIRSYSKGHIDAMVCD-TTDCWRFSGIYGNPQRDKHHETWALIDRLGEANSIPWVL
        +ET L  +  + +R  L F   LVV    Q GGL L W+ E NV+I+SYS  HID ++ +   D WRF+G YG P+  + H +WAL+  L +  S+PW+ 
Subjt:  METKLQYSGGDRVRRDLQFDCGLVVPTVGQSGGLLLLWQNETNVSIRSYSKGHIDAMVCD-TTDCWRFSGIYGNPQRDKHHETWALIDRLGEANSIPWVL

Query:  GGDFNEITSIDEKRGGPNRIERDMQKFRDCIDGCGLCDVGFIGPAFTWCNNHYQSEMIWERLDRFL
         GDFNE+ S+DEK+GGP R  R MQ FRD ID CG  D+G+ GP FTWCNN   S  +WERLDR L
Subjt:  GGDFNEITSIDEKRGGPNRIERDMQKFRDCIDGCGLCDVGFIGPAFTWCNNHYQSEMIWERLDRFL

A0A2N9IIR5 Uncharacterized protein5.4e-4045.09Show/hide
Query:  METKLQYSGGDRVRRDLQFDCGLVVPTVGQSGGLLLLWQNETNVSIRSYSKGHIDAMVCD-TTDCWRFSGIYGNPQRDKHHETWALIDRLGEANSIPWVL
        +ET L     +++R  L F   LVVP   + GG++L W+    ++I+S+S  HID+++ + T D WRF+G YG P+    H +W ++  L    S+PW  
Subjt:  METKLQYSGGDRVRRDLQFDCGLVVPTVGQSGGLLLLWQNETNVSIRSYSKGHIDAMVCD-TTDCWRFSGIYGNPQRDKHHETWALIDRLGEANSIPWVL

Query:  GGDFNEITSIDEKRGGPNRIERDMQKFRDCIDGCGLCDVGFIGPAFTWCNNHYQSEMIWERLDRFLVNSEMLL
         GDFNE+ S+ EKRGG  R +  MQ FRD +D CG  D+GF GP FTWCNN      +WERLDR +VNSE LL
Subjt:  GGDFNEITSIDEKRGGPNRIERDMQKFRDCIDGCGLCDVGFIGPAFTWCNNHYQSEMIWERLDRFLVNSEMLL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAACCAAGCTCCAATATAGTGGCGGTGATAGAGTTAGAAGAGATTTGCAGTTTGATTGTGGGTTGGTTGTTCCTACTGTGGGTCAAAGTGGAGGGTTGTTACTTTT
GTGGCAAAATGAAACCAATGTGTCTATTAGATCCTATTCGAAGGGACATATTGATGCTATGGTGTGCGATACGACTGATTGTTGGCGTTTCTCTGGAATTTATGGCAATC
CTCAGCGTGATAAACACCATGAGACGTGGGCTCTCATAGATAGATTGGGAGAAGCAAATTCGATTCCGTGGGTTCTTGGTGGAGATTTTAATGAAATTACTAGTATAGAT
GAAAAAAGGGGAGGGCCGAATCGGATTGAGCGAGATATGCAGAAGTTCAGAGATTGTATAGATGGTTGTGGCCTTTGTGATGTTGGATTCATAGGTCCTGCTTTCACTTG
GTGCAACAATCACTACCAATCAGAGATGATATGGGAAAGATTGGATAGATTTCTTGTAAATTCTGAGATGCTTCTGATAGCGAGCAGAAATGTCGCTATTTTAGTCTCAA
TTTATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAACCAAGCTCCAATATAGTGGCGGTGATAGAGTTAGAAGAGATTTGCAGTTTGATTGTGGGTTGGTTGTTCCTACTGTGGGTCAAAGTGGAGGGTTGTTACTTTT
GTGGCAAAATGAAACCAATGTGTCTATTAGATCCTATTCGAAGGGACATATTGATGCTATGGTGTGCGATACGACTGATTGTTGGCGTTTCTCTGGAATTTATGGCAATC
CTCAGCGTGATAAACACCATGAGACGTGGGCTCTCATAGATAGATTGGGAGAAGCAAATTCGATTCCGTGGGTTCTTGGTGGAGATTTTAATGAAATTACTAGTATAGAT
GAAAAAAGGGGAGGGCCGAATCGGATTGAGCGAGATATGCAGAAGTTCAGAGATTGTATAGATGGTTGTGGCCTTTGTGATGTTGGATTCATAGGTCCTGCTTTCACTTG
GTGCAACAATCACTACCAATCAGAGATGATATGGGAAAGATTGGATAGATTTCTTGTAAATTCTGAGATGCTTCTGATAGCGAGCAGAAATGTCGCTATTTTAGTCTCAA
TTTATTAA
Protein sequenceShow/hide protein sequence
METKLQYSGGDRVRRDLQFDCGLVVPTVGQSGGLLLLWQNETNVSIRSYSKGHIDAMVCDTTDCWRFSGIYGNPQRDKHHETWALIDRLGEANSIPWVLGGDFNEITSID
EKRGGPNRIERDMQKFRDCIDGCGLCDVGFIGPAFTWCNNHYQSEMIWERLDRFLVNSEMLLIASRNVAILVSIY