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Lag0018655 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0018655
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonuclease H
Genome locationchr5:31822410..31822763
RNA-Seq ExpressionLag0018655
SyntenyLag0018655
Gene Ontology termsNA
InterPro domainsIPR005162 - Retrotransposon gag domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022147761.1 uncharacterized protein LOC111016619 [Momordica charantia]2.6e-2653.1Show/hide
Query:  DFHGVSDAIRCRAFFFTLTGSARHWFERLKKRSISCFKDLARAFLAQFMGARELRKPHINLLTVKQQLGESLHDYITRFNDEALQVEGYNEGATLVAITT
        D +G+++AIRCR F FTLTGS R WF++LK++SIS FK+LARAF+ QF G     +P   LLT+KQ+  ESL DY+ RFN E LQVEG  +   L+   +
Subjt:  DFHGVSDAIRCRAFFFTLTGSARHWFERLKKRSISCFKDLARAFLAQFMGARELRKPHINLLTVKQQLGESLHDYITRFNDEALQVEGYNEGATLVAITT

Query:  GLEDERLLISIGK
        G++DE+L+ S GK
Subjt:  GLEDERLLISIGK

XP_022150035.1 uncharacterized protein LOC111018307 [Momordica charantia]4.0e-2752.99Show/hide
Query:  MDFHGVSDAIRCRAFFFTLTGSARHWFERLKKRSISCFKDLARAFLAQFMGARELRKPHINLLTVKQQLGESLHDYITRFNDEALQVEGYNEGATLVAIT
        MD +GVS+A++CR F  TL+GSAR WF +LK+ SIS FK LA+AF+ QF+G R   +P   LLT+KQ+  ESLHDY+ RFN+E LQVEG     +L+A  
Subjt:  MDFHGVSDAIRCRAFFFTLTGSARHWFERLKKRSISCFKDLARAFLAQFMGARELRKPHINLLTVKQQLGESLHDYITRFNDEALQVEGYNEGATLVAIT

Query:  TGLEDERLLISIGKSQP
        + + DE L  S GK  P
Subjt:  TGLEDERLLISIGKSQP

XP_022158344.1 uncharacterized protein LOC111024851 [Momordica charantia]2.8e-2854.31Show/hide
Query:  DFHGVSDAIRCRAFFFTLTGSARHWFERLKKRSISCFKDLARAFLAQFMGARELRKPHINLLTVKQQLGESLHDYITRFNDEALQVEGYNEGATLVAITT
        D + + +AIRCR F FTLTGSAR+WF +LK+ SIS FK+LA AF+ QF+G R   KP   LLT+KQ+  ESL +Y+ RFN+E LQVEG  +   L+A  +
Subjt:  DFHGVSDAIRCRAFFFTLTGSARHWFERLKKRSISCFKDLARAFLAQFMGARELRKPHINLLTVKQQLGESLHDYITRFNDEALQVEGYNEGATLVAITT

Query:  GLEDERLLISIGKSQP
        G++DERL+ S GK  P
Subjt:  GLEDERLLISIGKSQP

XP_022158830.1 uncharacterized protein LOC111025293 [Momordica charantia]4.0e-2754.7Show/hide
Query:  MDFHGVSDAIRCRAFFFTLTGSARHWFERLKKRSISCFKDLARAFLAQFMGARELRKPHINLLTVKQQLGESLHDYITRFNDEALQVEGYNEGATLVAIT
        MD +GVS+A+RCR F  TL GSAR WF +LK+ SIS FK LARAF+ QF+G R   +P   LLT+KQ+  ESL DY+ RFN+E LQVEG  +  +L+A  
Subjt:  MDFHGVSDAIRCRAFFFTLTGSARHWFERLKKRSISCFKDLARAFLAQFMGARELRKPHINLLTVKQQLGESLHDYITRFNDEALQVEGYNEGATLVAIT

Query:  TGLEDERLLISIGKSQP
        +G+ DE L  S GK  P
Subjt:  TGLEDERLLISIGKSQP

XP_022159109.1 uncharacterized protein LOC111025548 [Momordica charantia]1.1e-2755.56Show/hide
Query:  MDFHGVSDAIRCRAFFFTLTGSARHWFERLKKRSISCFKDLARAFLAQFMGARELRKPHINLLTVKQQLGESLHDYITRFNDEALQVEGYNEGATLVAIT
        MD +GVSDAIRCR F  TL GSAR WF +LK+ SIS FK LARAF+ QF+G R   +P   LLT+KQ+  ESLHDY+ RFN+E LQ+EG  +  +L+A  
Subjt:  MDFHGVSDAIRCRAFFFTLTGSARHWFERLKKRSISCFKDLARAFLAQFMGARELRKPHINLLTVKQQLGESLHDYITRFNDEALQVEGYNEGATLVAIT

Query:  TGLEDERLLISIGKSQP
        +G+ DE L  S  K  P
Subjt:  TGLEDERLLISIGKSQP

TrEMBL top hitse value%identityAlignment
A0A6J1D3B7 uncharacterized protein LOC1110166191.3e-2653.1Show/hide
Query:  DFHGVSDAIRCRAFFFTLTGSARHWFERLKKRSISCFKDLARAFLAQFMGARELRKPHINLLTVKQQLGESLHDYITRFNDEALQVEGYNEGATLVAITT
        D +G+++AIRCR F FTLTGS R WF++LK++SIS FK+LARAF+ QF G     +P   LLT+KQ+  ESL DY+ RFN E LQVEG  +   L+   +
Subjt:  DFHGVSDAIRCRAFFFTLTGSARHWFERLKKRSISCFKDLARAFLAQFMGARELRKPHINLLTVKQQLGESLHDYITRFNDEALQVEGYNEGATLVAITT

Query:  GLEDERLLISIGK
        G++DE+L+ S GK
Subjt:  GLEDERLLISIGK

A0A6J1D7D2 uncharacterized protein LOC1110183072.0e-2752.99Show/hide
Query:  MDFHGVSDAIRCRAFFFTLTGSARHWFERLKKRSISCFKDLARAFLAQFMGARELRKPHINLLTVKQQLGESLHDYITRFNDEALQVEGYNEGATLVAIT
        MD +GVS+A++CR F  TL+GSAR WF +LK+ SIS FK LA+AF+ QF+G R   +P   LLT+KQ+  ESLHDY+ RFN+E LQVEG     +L+A  
Subjt:  MDFHGVSDAIRCRAFFFTLTGSARHWFERLKKRSISCFKDLARAFLAQFMGARELRKPHINLLTVKQQLGESLHDYITRFNDEALQVEGYNEGATLVAIT

Query:  TGLEDERLLISIGKSQP
        + + DE L  S GK  P
Subjt:  TGLEDERLLISIGKSQP

A0A6J1DWY0 uncharacterized protein LOC1110252932.0e-2754.7Show/hide
Query:  MDFHGVSDAIRCRAFFFTLTGSARHWFERLKKRSISCFKDLARAFLAQFMGARELRKPHINLLTVKQQLGESLHDYITRFNDEALQVEGYNEGATLVAIT
        MD +GVS+A+RCR F  TL GSAR WF +LK+ SIS FK LARAF+ QF+G R   +P   LLT+KQ+  ESL DY+ RFN+E LQVEG  +  +L+A  
Subjt:  MDFHGVSDAIRCRAFFFTLTGSARHWFERLKKRSISCFKDLARAFLAQFMGARELRKPHINLLTVKQQLGESLHDYITRFNDEALQVEGYNEGATLVAIT

Query:  TGLEDERLLISIGKSQP
        +G+ DE L  S GK  P
Subjt:  TGLEDERLLISIGKSQP

A0A6J1DZ49 uncharacterized protein LOC1110248511.4e-2854.31Show/hide
Query:  DFHGVSDAIRCRAFFFTLTGSARHWFERLKKRSISCFKDLARAFLAQFMGARELRKPHINLLTVKQQLGESLHDYITRFNDEALQVEGYNEGATLVAITT
        D + + +AIRCR F FTLTGSAR+WF +LK+ SIS FK+LA AF+ QF+G R   KP   LLT+KQ+  ESL +Y+ RFN+E LQVEG  +   L+A  +
Subjt:  DFHGVSDAIRCRAFFFTLTGSARHWFERLKKRSISCFKDLARAFLAQFMGARELRKPHINLLTVKQQLGESLHDYITRFNDEALQVEGYNEGATLVAITT

Query:  GLEDERLLISIGKSQP
        G++DERL+ S GK  P
Subjt:  GLEDERLLISIGKSQP

A0A6J1E1E7 uncharacterized protein LOC1110255485.2e-2855.56Show/hide
Query:  MDFHGVSDAIRCRAFFFTLTGSARHWFERLKKRSISCFKDLARAFLAQFMGARELRKPHINLLTVKQQLGESLHDYITRFNDEALQVEGYNEGATLVAIT
        MD +GVSDAIRCR F  TL GSAR WF +LK+ SIS FK LARAF+ QF+G R   +P   LLT+KQ+  ESLHDY+ RFN+E LQ+EG  +  +L+A  
Subjt:  MDFHGVSDAIRCRAFFFTLTGSARHWFERLKKRSISCFKDLARAFLAQFMGARELRKPHINLLTVKQQLGESLHDYITRFNDEALQVEGYNEGATLVAIT

Query:  TGLEDERLLISIGKSQP
        +G+ DE L  S  K  P
Subjt:  TGLEDERLLISIGKSQP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACTTCCACGGCGTCTCAGATGCAATCAGGTGTCGTGCATTCTTTTTCACTCTAACAGGATCAGCCAGGCACTGGTTTGAGAGGCTGAAAAAGAGATCCATCAGCTG
TTTCAAGGATTTAGCCCGAGCATTTCTTGCACAGTTCATGGGAGCCAGAGAACTGCGCAAACCTCACATCAACCTTTTAACAGTCAAACAACAGCTAGGTGAGAGCTTGC
ATGATTACATAACGCGTTTTAATGACGAAGCACTACAGGTTGAGGGGTACAACGAGGGAGCAACCCTAGTAGCCATAACAACCGGACTGGAAGACGAAAGACTGCTCATT
TCAATAGGTAAGAGCCAACCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGACTTCCACGGCGTCTCAGATGCAATCAGGTGTCGTGCATTCTTTTTCACTCTAACAGGATCAGCCAGGCACTGGTTTGAGAGGCTGAAAAAGAGATCCATCAGCTG
TTTCAAGGATTTAGCCCGAGCATTTCTTGCACAGTTCATGGGAGCCAGAGAACTGCGCAAACCTCACATCAACCTTTTAACAGTCAAACAACAGCTAGGTGAGAGCTTGC
ATGATTACATAACGCGTTTTAATGACGAAGCACTACAGGTTGAGGGGTACAACGAGGGAGCAACCCTAGTAGCCATAACAACCGGACTGGAAGACGAAAGACTGCTCATT
TCAATAGGTAAGAGCCAACCTTGA
Protein sequenceShow/hide protein sequence
MDFHGVSDAIRCRAFFFTLTGSARHWFERLKKRSISCFKDLARAFLAQFMGARELRKPHINLLTVKQQLGESLHDYITRFNDEALQVEGYNEGATLVAITTGLEDERLLI
SIGKSQP