; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0018709 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0018709
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotransposon gag protein
Genome locationchr5:33066362..33067054
RNA-Seq ExpressionLag0018709
SyntenyLag0018709
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0008233 - peptidase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040811.1 retrotransposon gag protein [Cucumis melo var. makuwa]6.3e-4050Show/hide
Query:  IKEKSKHQRKKDPKKLQPKRKRSKKFSQPQQLVMLNKSFSKNF---HKKEKENFATSYCIKV----------EEVDNSKKGEQRTSVFDHIKPSTTRSSI
        I  K K +R K   K +P + + + F QP+Q + L + F ++F   H KE       +   +          EEVDNS + +QRTSVFD IKP TTRSS+
Subjt:  IKEKSKHQRKKDPKKLQPKRKRSKKFSQPQQLVMLNKSFSKNF---HKKEKENFATSYCIKV----------EEVDNSKKGEQRTSVFDHIKPSTTRSSI

Query:  FQRMSMAATEEENQCSTSTFTRPSAFQRLSVSTSKKSQPSTSVFDRLRVTSDQPKRKMDNLEVKLFDEVNNDKKLQSSIPSRMKRKFSVIINTEGSLKVK
        FQR+S+   EEENQC TST TR SAF+ LS+STSKK +PSTS FDRL++ +DQ +R+M +L+VK F E N+D K+ S +PSRMKRK SV INTEGSL VK
Subjt:  FQRMSMAATEEENQCSTSTFTRPSAFQRLSVSTSKKSQPSTSVFDRLRVTSDQPKRKMDNLEVKLFDEVNNDKKLQSSIPSRMKRKFSVIINTEGSLKVK

Query:  QNLIILTNPTSQGSDQDHDEDK
           II TNP ++G ++  DE+K
Subjt:  QNLIILTNPTSQGSDQDHDEDK

KAA0044978.1 retrotransposon gag protein [Cucumis melo var. makuwa]3.3e-4150.9Show/hide
Query:  IKEKSKHQRKKDPKKLQPKRKRSKKFSQPQQLVMLNKSFSKNFHKKEKENFA------TSYCIKV-------EEVDNSKKGEQRTSVFDHIKPSTTRSSI
        I  K K +R K   K +P + + +   QP+Q + L + F ++F +   E         T+  +KV       EEVDNS + +QRTSVFD IKP TTRSS+
Subjt:  IKEKSKHQRKKDPKKLQPKRKRSKKFSQPQQLVMLNKSFSKNFHKKEKENFA------TSYCIKV-------EEVDNSKKGEQRTSVFDHIKPSTTRSSI

Query:  FQRMSMAATEEENQCSTSTFTRPSAFQRLSVSTSKKSQPSTSVFDRLRVTSDQPKRKMDNLEVKLFDEVNNDKKLQSSIPSRMKRKFSVIINTEGSLKVK
        FQR+SMA  EEENQC TST+ R SAF+RLS+STSKK +PSTS FDRL++T+DQ +R+M +L+ K F E N+D K+ S +PSRMKRK SV INTEGSL VK
Subjt:  FQRMSMAATEEENQCSTSTFTRPSAFQRLSVSTSKKSQPSTSVFDRLRVTSDQPKRKMDNLEVKLFDEVNNDKKLQSSIPSRMKRKFSVIINTEGSLKVK

Query:  QNLIILTNPTSQGSDQDHDEDK
           II TNP ++G ++  DE+K
Subjt:  QNLIILTNPTSQGSDQDHDEDK

KAA0050736.1 retrotransposon gag protein [Cucumis melo var. makuwa]1.9e-4149.55Show/hide
Query:  IKEKSKHQRKKDPKKLQPKRKRSKKFSQPQQLVMLNKSFSKNFHKKEKENFA------TSYCIKV-------EEVDNSKKGEQRTSVFDHIKPSTTRSSI
        I  K K +R K   K +P +++ +KF QP++ + L + F ++F +   E         T+  ++V       EEVDNS + +QRTSVFD IKP TTRSS+
Subjt:  IKEKSKHQRKKDPKKLQPKRKRSKKFSQPQQLVMLNKSFSKNFHKKEKENFA------TSYCIKV-------EEVDNSKKGEQRTSVFDHIKPSTTRSSI

Query:  FQRMSMAATEEENQCSTSTFTRPSAFQRLSVSTSKKSQPSTSVFDRLRVTSDQPKRKMDNLEVKLFDEVNNDKKLQSSIPSRMKRKFSVIINTEGSLKVK
        FQR+SMA  EEENQC  ST+TR SAF+RLS+S SKK +PSTS FDRL++T+DQ +R+M +L+ K F E N+D K+ S +PSR+KRK S+ INTEGSL VK
Subjt:  FQRMSMAATEEENQCSTSTFTRPSAFQRLSVSTSKKSQPSTSVFDRLRVTSDQPKRKMDNLEVKLFDEVNNDKKLQSSIPSRMKRKFSVIINTEGSLKVK

Query:  QNLIILTNPTSQGSDQDHDEDKGF
           II TNP ++G ++  DE+K F
Subjt:  QNLIILTNPTSQGSDQDHDEDKGF

KAA0055462.1 retrotransposon gag protein [Cucumis melo var. makuwa]1.7e-4049.55Show/hide
Query:  IKEKSKHQRKKDPKKLQPKRKRSKKFSQPQQLVMLNKSFSKNFHKKEKENFA------TSYCIKV-------EEVDNSKKGEQRTSVFDHIKPSTTRSSI
        I  K K +R K   K +P + + + F QP++ + L +  S++F +   E         T+  ++V       EEVDNS + +QRTSVFD IKP TTRSS+
Subjt:  IKEKSKHQRKKDPKKLQPKRKRSKKFSQPQQLVMLNKSFSKNFHKKEKENFA------TSYCIKV-------EEVDNSKKGEQRTSVFDHIKPSTTRSSI

Query:  FQRMSMAATEEENQCSTSTFTRPSAFQRLSVSTSKKSQPSTSVFDRLRVTSDQPKRKMDNLEVKLFDEVNNDKKLQSSIPSRMKRKFSVIINTEGSLKVK
        FQR+SMA  EE+NQC TST+ R SAF+RLS+STSKK +PSTS FDRL++T+DQ +R+M +L+ K F E N+D K+ + +PSRMKRK SV INTEGSL VK
Subjt:  FQRMSMAATEEENQCSTSTFTRPSAFQRLSVSTSKKSQPSTSVFDRLRVTSDQPKRKMDNLEVKLFDEVNNDKKLQSSIPSRMKRKFSVIINTEGSLKVK

Query:  QNLIILTNPTSQGSDQDHDEDK
           II TNP ++G ++  DE+K
Subjt:  QNLIILTNPTSQGSDQDHDEDK

TYK08944.1 retrotransposon gag protein [Cucumis melo var. makuwa]1.7e-4049.55Show/hide
Query:  IKEKSKHQRKKDPKKLQPKRKRSKKFSQPQQLVMLNKSFSKNFHKKEKENFA------TSYCIKV-------EEVDNSKKGEQRTSVFDHIKPSTTRSSI
        I  K K +R K   K +P + + + F QP++ + L +  S++F +   E         T+  ++V       EEVDNS + +QRTSVFD IKP TTRSS+
Subjt:  IKEKSKHQRKKDPKKLQPKRKRSKKFSQPQQLVMLNKSFSKNFHKKEKENFA------TSYCIKV-------EEVDNSKKGEQRTSVFDHIKPSTTRSSI

Query:  FQRMSMAATEEENQCSTSTFTRPSAFQRLSVSTSKKSQPSTSVFDRLRVTSDQPKRKMDNLEVKLFDEVNNDKKLQSSIPSRMKRKFSVIINTEGSLKVK
        FQR+SMA  EE+NQC TST+ R SAF+RLS+STSKK +PSTS FDRL++T+DQ +R+M +L+ K F E N+D K+ + +PSRMKRK SV INTEGSL VK
Subjt:  FQRMSMAATEEENQCSTSTFTRPSAFQRLSVSTSKKSQPSTSVFDRLRVTSDQPKRKMDNLEVKLFDEVNNDKKLQSSIPSRMKRKFSVIINTEGSLKVK

Query:  QNLIILTNPTSQGSDQDHDEDK
           II TNP ++G ++  DE+K
Subjt:  QNLIILTNPTSQGSDQDHDEDK

TrEMBL top hitse value%identityAlignment
A0A5A7TGM1 Retrotransposon gag protein3.0e-4050Show/hide
Query:  IKEKSKHQRKKDPKKLQPKRKRSKKFSQPQQLVMLNKSFSKNF---HKKEKENFATSYCIKV----------EEVDNSKKGEQRTSVFDHIKPSTTRSSI
        I  K K +R K   K +P + + + F QP+Q + L + F ++F   H KE       +   +          EEVDNS + +QRTSVFD IKP TTRSS+
Subjt:  IKEKSKHQRKKDPKKLQPKRKRSKKFSQPQQLVMLNKSFSKNF---HKKEKENFATSYCIKV----------EEVDNSKKGEQRTSVFDHIKPSTTRSSI

Query:  FQRMSMAATEEENQCSTSTFTRPSAFQRLSVSTSKKSQPSTSVFDRLRVTSDQPKRKMDNLEVKLFDEVNNDKKLQSSIPSRMKRKFSVIINTEGSLKVK
        FQR+S+   EEENQC TST TR SAF+ LS+STSKK +PSTS FDRL++ +DQ +R+M +L+VK F E N+D K+ S +PSRMKRK SV INTEGSL VK
Subjt:  FQRMSMAATEEENQCSTSTFTRPSAFQRLSVSTSKKSQPSTSVFDRLRVTSDQPKRKMDNLEVKLFDEVNNDKKLQSSIPSRMKRKFSVIINTEGSLKVK

Query:  QNLIILTNPTSQGSDQDHDEDK
           II TNP ++G ++  DE+K
Subjt:  QNLIILTNPTSQGSDQDHDEDK

A0A5A7TQ06 Retrotransposon gag protein1.6e-4150.9Show/hide
Query:  IKEKSKHQRKKDPKKLQPKRKRSKKFSQPQQLVMLNKSFSKNFHKKEKENFA------TSYCIKV-------EEVDNSKKGEQRTSVFDHIKPSTTRSSI
        I  K K +R K   K +P + + +   QP+Q + L + F ++F +   E         T+  +KV       EEVDNS + +QRTSVFD IKP TTRSS+
Subjt:  IKEKSKHQRKKDPKKLQPKRKRSKKFSQPQQLVMLNKSFSKNFHKKEKENFA------TSYCIKV-------EEVDNSKKGEQRTSVFDHIKPSTTRSSI

Query:  FQRMSMAATEEENQCSTSTFTRPSAFQRLSVSTSKKSQPSTSVFDRLRVTSDQPKRKMDNLEVKLFDEVNNDKKLQSSIPSRMKRKFSVIINTEGSLKVK
        FQR+SMA  EEENQC TST+ R SAF+RLS+STSKK +PSTS FDRL++T+DQ +R+M +L+ K F E N+D K+ S +PSRMKRK SV INTEGSL VK
Subjt:  FQRMSMAATEEENQCSTSTFTRPSAFQRLSVSTSKKSQPSTSVFDRLRVTSDQPKRKMDNLEVKLFDEVNNDKKLQSSIPSRMKRKFSVIINTEGSLKVK

Query:  QNLIILTNPTSQGSDQDHDEDK
           II TNP ++G ++  DE+K
Subjt:  QNLIILTNPTSQGSDQDHDEDK

A0A5A7U974 Retrotransposon gag protein9.4e-4249.55Show/hide
Query:  IKEKSKHQRKKDPKKLQPKRKRSKKFSQPQQLVMLNKSFSKNFHKKEKENFA------TSYCIKV-------EEVDNSKKGEQRTSVFDHIKPSTTRSSI
        I  K K +R K   K +P +++ +KF QP++ + L + F ++F +   E         T+  ++V       EEVDNS + +QRTSVFD IKP TTRSS+
Subjt:  IKEKSKHQRKKDPKKLQPKRKRSKKFSQPQQLVMLNKSFSKNFHKKEKENFA------TSYCIKV-------EEVDNSKKGEQRTSVFDHIKPSTTRSSI

Query:  FQRMSMAATEEENQCSTSTFTRPSAFQRLSVSTSKKSQPSTSVFDRLRVTSDQPKRKMDNLEVKLFDEVNNDKKLQSSIPSRMKRKFSVIINTEGSLKVK
        FQR+SMA  EEENQC  ST+TR SAF+RLS+S SKK +PSTS FDRL++T+DQ +R+M +L+ K F E N+D K+ S +PSR+KRK S+ INTEGSL VK
Subjt:  FQRMSMAATEEENQCSTSTFTRPSAFQRLSVSTSKKSQPSTSVFDRLRVTSDQPKRKMDNLEVKLFDEVNNDKKLQSSIPSRMKRKFSVIINTEGSLKVK

Query:  QNLIILTNPTSQGSDQDHDEDKGF
           II TNP ++G ++  DE+K F
Subjt:  QNLIILTNPTSQGSDQDHDEDKGF

A0A5A7UI09 Retrotransposon gag protein8.0e-4149.55Show/hide
Query:  IKEKSKHQRKKDPKKLQPKRKRSKKFSQPQQLVMLNKSFSKNFHKKEKENFA------TSYCIKV-------EEVDNSKKGEQRTSVFDHIKPSTTRSSI
        I  K K +R K   K +P + + + F QP++ + L +  S++F +   E         T+  ++V       EEVDNS + +QRTSVFD IKP TTRSS+
Subjt:  IKEKSKHQRKKDPKKLQPKRKRSKKFSQPQQLVMLNKSFSKNFHKKEKENFA------TSYCIKV-------EEVDNSKKGEQRTSVFDHIKPSTTRSSI

Query:  FQRMSMAATEEENQCSTSTFTRPSAFQRLSVSTSKKSQPSTSVFDRLRVTSDQPKRKMDNLEVKLFDEVNNDKKLQSSIPSRMKRKFSVIINTEGSLKVK
        FQR+SMA  EE+NQC TST+ R SAF+RLS+STSKK +PSTS FDRL++T+DQ +R+M +L+ K F E N+D K+ + +PSRMKRK SV INTEGSL VK
Subjt:  FQRMSMAATEEENQCSTSTFTRPSAFQRLSVSTSKKSQPSTSVFDRLRVTSDQPKRKMDNLEVKLFDEVNNDKKLQSSIPSRMKRKFSVIINTEGSLKVK

Query:  QNLIILTNPTSQGSDQDHDEDK
           II TNP ++G ++  DE+K
Subjt:  QNLIILTNPTSQGSDQDHDEDK

A0A5D3CCI8 Retrotransposon gag protein8.0e-4149.55Show/hide
Query:  IKEKSKHQRKKDPKKLQPKRKRSKKFSQPQQLVMLNKSFSKNFHKKEKENFA------TSYCIKV-------EEVDNSKKGEQRTSVFDHIKPSTTRSSI
        I  K K +R K   K +P + + + F QP++ + L +  S++F +   E         T+  ++V       EEVDNS + +QRTSVFD IKP TTRSS+
Subjt:  IKEKSKHQRKKDPKKLQPKRKRSKKFSQPQQLVMLNKSFSKNFHKKEKENFA------TSYCIKV-------EEVDNSKKGEQRTSVFDHIKPSTTRSSI

Query:  FQRMSMAATEEENQCSTSTFTRPSAFQRLSVSTSKKSQPSTSVFDRLRVTSDQPKRKMDNLEVKLFDEVNNDKKLQSSIPSRMKRKFSVIINTEGSLKVK
        FQR+SMA  EE+NQC TST+ R SAF+RLS+STSKK +PSTS FDRL++T+DQ +R+M +L+ K F E N+D K+ + +PSRMKRK SV INTEGSL VK
Subjt:  FQRMSMAATEEENQCSTSTFTRPSAFQRLSVSTSKKSQPSTSVFDRLRVTSDQPKRKMDNLEVKLFDEVNNDKKLQSSIPSRMKRKFSVIINTEGSLKVK

Query:  QNLIILTNPTSQGSDQDHDEDK
           II TNP ++G ++  DE+K
Subjt:  QNLIILTNPTSQGSDQDHDEDK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGGAAAAATTGAGCTCGACCTTGATGAAGTAGCTCAATCAAATCTTGCTACAATCAAAGAAAAGAGCAAACATCAAAGAAAGAAGGATCCTAAGAAACTTCAACC
CAAGAGGAAGAGAAGTAAAAAGTTTTCTCAACCTCAACAACTGGTGATGTTGAATAAATCCTTCTCCAAAAATTTCCACAAAAAGGAAAAAGAGAACTTTGCGACTTCCT
ACTGCATCAAAGTGGAAGAAGTTGACAATTCCAAGAAGGGTGAACAAAGGACTTCTGTCTTCGATCACATCAAGCCTTCAACTACTCGTTCTTCAATATTCCAAAGAATG
AGTATGGCTGCAACAGAAGAAGAAAATCAATGTTCGACGTCCACTTTCACTCGACCTTCAGCTTTCCAAAGGCTAAGTGTCTCCACATCGAAGAAAAGTCAACCTTCGAC
ATCTGTTTTTGATCGCCTCAGAGTAACAAGCGATCAACCTAAAAGAAAGATGGATAACTTGGAGGTGAAACTTTTCGATGAAGTAAACAATGACAAGAAGCTTCAAAGTA
GCATCCCGTCACGTATGAAGAGGAAGTTCTCTGTTATCATAAATACAGAAGGTTCCTTGAAGGTGAAACAAAATCTCATTATCTTGACCAATCCTACAAGTCAAGGATCT
GATCAAGACCATGATGAAGATAAGGGTTTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGGAAAAATTGAGCTCGACCTTGATGAAGTAGCTCAATCAAATCTTGCTACAATCAAAGAAAAGAGCAAACATCAAAGAAAGAAGGATCCTAAGAAACTTCAACC
CAAGAGGAAGAGAAGTAAAAAGTTTTCTCAACCTCAACAACTGGTGATGTTGAATAAATCCTTCTCCAAAAATTTCCACAAAAAGGAAAAAGAGAACTTTGCGACTTCCT
ACTGCATCAAAGTGGAAGAAGTTGACAATTCCAAGAAGGGTGAACAAAGGACTTCTGTCTTCGATCACATCAAGCCTTCAACTACTCGTTCTTCAATATTCCAAAGAATG
AGTATGGCTGCAACAGAAGAAGAAAATCAATGTTCGACGTCCACTTTCACTCGACCTTCAGCTTTCCAAAGGCTAAGTGTCTCCACATCGAAGAAAAGTCAACCTTCGAC
ATCTGTTTTTGATCGCCTCAGAGTAACAAGCGATCAACCTAAAAGAAAGATGGATAACTTGGAGGTGAAACTTTTCGATGAAGTAAACAATGACAAGAAGCTTCAAAGTA
GCATCCCGTCACGTATGAAGAGGAAGTTCTCTGTTATCATAAATACAGAAGGTTCCTTGAAGGTGAAACAAAATCTCATTATCTTGACCAATCCTACAAGTCAAGGATCT
GATCAAGACCATGATGAAGATAAGGGTTTTTAA
Protein sequenceShow/hide protein sequence
MEGKIELDLDEVAQSNLATIKEKSKHQRKKDPKKLQPKRKRSKKFSQPQQLVMLNKSFSKNFHKKEKENFATSYCIKVEEVDNSKKGEQRTSVFDHIKPSTTRSSIFQRM
SMAATEEENQCSTSTFTRPSAFQRLSVSTSKKSQPSTSVFDRLRVTSDQPKRKMDNLEVKLFDEVNNDKKLQSSIPSRMKRKFSVIINTEGSLKVKQNLIILTNPTSQGS
DQDHDEDKGF