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Lag0018712 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0018712
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionProtein FAR1-RELATED SEQUENCE 2-like
Genome locationchr5:33097117..33104281
RNA-Seq ExpressionLag0018712
SyntenyLag0018712
Gene Ontology termsGO:0006310 - DNA recombination (biological process)
GO:0032196 - transposition (biological process)
GO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061274.1 uncharacterized protein E6C27_scaffold455G001170 [Cucumis melo var. makuwa]1.7e-1647.06Show/hide
Query:  IVKNDHRQATAWF-------VGEHKELVIVSNGHLSIPNGLRNSYDSAEHELCEWHLLRNLKKRYKSNLIDNAFHNCVRAYTAVDYEYYMRQLEDI-VSS
        +V +++  + +WF        GEH E+VIVS+ H SI NG    Y+ AEH LC +HLL+NLKK +KS  ++++F+ C RAYT + +EYYMRQLE +  S 
Subjt:  IVKNDHRQATAWF-------VGEHKELVIVSNGHLSIPNGLRNSYDSAEHELCEWHLLRNLKKRYKSNLIDNAFHNCVRAYTAVDYEYYMRQLEDI-VSS

Query:  RH
        RH
Subjt:  RH

KAA0067291.1 protein FAR1-RELATED SEQUENCE 2-like [Cucumis melo var. makuwa]2.9e-1656.79Show/hide
Query:  GEHKELVIVSNGHLSIPNGLRNSYDSAEHELCEWHLLRNLKKRYKSNLIDNAFHNCVRAYTAVDYEYYMRQLEDI-VSSRH
        GEH E+VIVS+ H SI NG    Y+ AEH LC +HLL+NLKK YKS  ++++F+ C RAYT +++EYYMRQLE +  S RH
Subjt:  GEHKELVIVSNGHLSIPNGLRNSYDSAEHELCEWHLLRNLKKRYKSNLIDNAFHNCVRAYTAVDYEYYMRQLEDI-VSSRH

TYK09853.1 uncharacterized protein E5676_scaffold39G00210 [Cucumis melo var. makuwa]1.3e-1641.73Show/hide
Query:  IVKNDHRQATAWF-------VGEHKELVIVSNGHLSIPNGLRNSYDSAEHELCEWHLLRNLKKRYKSNLIDNAFHNCVRAYTAVDYEYYMRQLEDIVSS-
        +V +++  + +WF        GEH E+VIVS+ H SI NG    Y+ AEH LC +HLL+NLKK +KS  ++++F+ C RAYT +++EYYMRQLE +  S 
Subjt:  IVKNDHRQATAWF-------VGEHKELVIVSNGHLSIPNGLRNSYDSAEHELCEWHLLRNLKKRYKSNLIDNAFHNCVRAYTAVDYEYYMRQLEDIVSS-

Query:  --------RHVPATRSDRRPRKRGVST
                RH  A    RR R + ++T
Subjt:  --------RHVPATRSDRRPRKRGVST

TYK10904.1 uncharacterized protein E5676_scaffold231G00820 [Cucumis melo var. makuwa]2.9e-1656.79Show/hide
Query:  GEHKELVIVSNGHLSIPNGLRNSYDSAEHELCEWHLLRNLKKRYKSNLIDNAFHNCVRAYTAVDYEYYMRQLEDI-VSSRH
        GEH E+VIVS+ H SI NG    Y+ AEH LC +HLL+NLKK YKS  ++++F+ C RAYT +++EYYMRQLE +  S RH
Subjt:  GEHKELVIVSNGHLSIPNGLRNSYDSAEHELCEWHLLRNLKKRYKSNLIDNAFHNCVRAYTAVDYEYYMRQLEDI-VSSRH

TYK29863.1 MuDRA-like transposase [Cucumis melo var. makuwa]1.3e-1641.73Show/hide
Query:  IVKNDHRQATAWF-------VGEHKELVIVSNGHLSIPNGLRNSYDSAEHELCEWHLLRNLKKRYKSNLIDNAFHNCVRAYTAVDYEYYMRQLEDIVSS-
        +V +++  + +WF        GEH E+VIVS+ H SI NG    Y+ AEH LC +HLL+NLKK +KS  ++++F+ C RAYT +++EYYMRQLE +  S 
Subjt:  IVKNDHRQATAWF-------VGEHKELVIVSNGHLSIPNGLRNSYDSAEHELCEWHLLRNLKKRYKSNLIDNAFHNCVRAYTAVDYEYYMRQLEDIVSS-

Query:  --------RHVPATRSDRRPRKRGVST
                RH  A    RR R + ++T
Subjt:  --------RHVPATRSDRRPRKRGVST

TrEMBL top hitse value%identityAlignment
A0A5A7V1Z6 CCHC-type domain-containing protein8.3e-1747.06Show/hide
Query:  IVKNDHRQATAWF-------VGEHKELVIVSNGHLSIPNGLRNSYDSAEHELCEWHLLRNLKKRYKSNLIDNAFHNCVRAYTAVDYEYYMRQLEDI-VSS
        +V +++  + +WF        GEH E+VIVS+ H SI NG    Y+ AEH LC +HLL+NLKK +KS  ++++F+ C RAYT + +EYYMRQLE +  S 
Subjt:  IVKNDHRQATAWF-------VGEHKELVIVSNGHLSIPNGLRNSYDSAEHELCEWHLLRNLKKRYKSNLIDNAFHNCVRAYTAVDYEYYMRQLEDI-VSS

Query:  RH
        RH
Subjt:  RH

A0A5A7VNV1 Protein FAR1-RELATED SEQUENCE 2-like1.4e-1656.79Show/hide
Query:  GEHKELVIVSNGHLSIPNGLRNSYDSAEHELCEWHLLRNLKKRYKSNLIDNAFHNCVRAYTAVDYEYYMRQLEDI-VSSRH
        GEH E+VIVS+ H SI NG    Y+ AEH LC +HLL+NLKK YKS  ++++F+ C RAYT +++EYYMRQLE +  S RH
Subjt:  GEHKELVIVSNGHLSIPNGLRNSYDSAEHELCEWHLLRNLKKRYKSNLIDNAFHNCVRAYTAVDYEYYMRQLEDI-VSSRH

A0A5D3CDB8 Uncharacterized protein6.3e-1741.73Show/hide
Query:  IVKNDHRQATAWF-------VGEHKELVIVSNGHLSIPNGLRNSYDSAEHELCEWHLLRNLKKRYKSNLIDNAFHNCVRAYTAVDYEYYMRQLEDIVSS-
        +V +++  + +WF        GEH E+VIVS+ H SI NG    Y+ AEH LC +HLL+NLKK +KS  ++++F+ C RAYT +++EYYMRQLE +  S 
Subjt:  IVKNDHRQATAWF-------VGEHKELVIVSNGHLSIPNGLRNSYDSAEHELCEWHLLRNLKKRYKSNLIDNAFHNCVRAYTAVDYEYYMRQLEDIVSS-

Query:  --------RHVPATRSDRRPRKRGVST
                RH  A    RR R + ++T
Subjt:  --------RHVPATRSDRRPRKRGVST

A0A5D3CIA4 Uncharacterized protein1.4e-1656.79Show/hide
Query:  GEHKELVIVSNGHLSIPNGLRNSYDSAEHELCEWHLLRNLKKRYKSNLIDNAFHNCVRAYTAVDYEYYMRQLEDI-VSSRH
        GEH E+VIVS+ H SI NG    Y+ AEH LC +HLL+NLKK YKS  ++++F+ C RAYT +++EYYMRQLE +  S RH
Subjt:  GEHKELVIVSNGHLSIPNGLRNSYDSAEHELCEWHLLRNLKKRYKSNLIDNAFHNCVRAYTAVDYEYYMRQLEDI-VSSRH

A0A5D3E198 MuDRA-like transposase6.3e-1741.73Show/hide
Query:  IVKNDHRQATAWF-------VGEHKELVIVSNGHLSIPNGLRNSYDSAEHELCEWHLLRNLKKRYKSNLIDNAFHNCVRAYTAVDYEYYMRQLEDIVSS-
        +V +++  + +WF        GEH E+VIVS+ H SI NG    Y+ AEH LC +HLL+NLKK +KS  ++++F+ C RAYT +++EYYMRQLE +  S 
Subjt:  IVKNDHRQATAWF-------VGEHKELVIVSNGHLSIPNGLRNSYDSAEHELCEWHLLRNLKKRYKSNLIDNAFHNCVRAYTAVDYEYYMRQLEDIVSS-

Query:  --------RHVPATRSDRRPRKRGVST
                RH  A    RR R + ++T
Subjt:  --------RHVPATRSDRRPRKRGVST

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATAGGAATGAGGTCAACAAATCGAACATAATATGGATTACTGACGACAGGGATGCTGTATGGTTCATGTGGAACATTACTAGTGGGATGTCTAGTGACATTTGTGT
TGTTGCTGACCATGCAAGAGGGATGCTCAAAGTGCTTTTTCACAGTGTTTCGGTGTCGGTAACCACGGGTCCACCCTGCAACATAAAGTTAGCAAAAAAAAATTACAAAG
TTGTTGATTACATCGATGTTGACTGTTTGGCTTCATCTGTACGGGGTCGGGAAACACTTAAAGGCAATGGGACTTACTCACGAGGTTTTCTTGCTGAAAACACAAGGAAA
AGGAAACTTGAACCACGAAACCCACGAATAGAGAGCGAACGCGGCGGCGACTGGACGGCGCGACCTCCACAAGAAGAACCGAGAGGGAGGGCGATCGCGGTGCGGGAGAG
AGGGATCCGCGAAGACAAAAACGTGCGAAGATGCGGAGACCCACGCGACAACGGCGACGGCACAACGGGCTCAGGCGGCGGCGACGCTGAACGGAGTAGGCGGCGGTGCG
AGGCTGCAGGCGGCGGCGGCGCGGTTGCTGTGTGGAGGGAGAAGAATAAAAACGCAGGGGAGATGGGGGGAGGGGCACGCACGCACGGGGACCTGTGGATGGTTCGTAAG
TTTGTGGAAAGGCATGAATGTCCTATTGATATAGTAAAAAATGATCATCGTCAAGCCACAGCTTGGTTTGTGGGTGAGCACAAAGAGCTGGTTATTGTTTCCAATGGGCA
TCTTAGTATACCCAATGGTCTTAGGAATAGCTACGATTCTGCAGAGCATGAACTTTGTGAGTGGCACTTATTGAGGAACCTGAAAAAAAGATACAAGTCTAACTTGATTG
ACAATGCATTCCACAATTGTGTTAGGGCGTACACAGCCGTAGATTATGAATATTACATGAGACAATTAGAAGACATAGTCAGCTCTCGCCACGTGCCTGCGACGCGGAGC
GACCGACGTCCTCGAAAAAGGGGTGTTAGCACTCCACAACACCCGTTAAAAACGGCAATTTTGGACCACCCCGATGTACGAGGAGCTGACGAGGACAATCGGGGAGAAAT
CGGGATGGATACGGGCCAAGGAGGCGGAGCCGGCAAGCGGGACGGGCCAAGGCCGAAGGGGTCGGGTTTTTACCCGACCCATGCTCGGCCTCCCATGGCCGAGGCCGAGC
CCGTTCGGTCTCGTCTGGTCCACATCGCCTCTGGCTGCCACGGTTTCGCCTGGTTTGACCTAAAACGCCTCCGAATACCTAAAAACCCTAGGAGGATGAGCAGGTCAGGT
GAGATCCTCTGGCCAAAATCGACCATCAACAGTTGGTGCCGTCTGTGGGGACGAAAGCCTGTTAATCTGCACATCGGTTATTCCATGAGTAAGGGTATGGAGAAGAAAGA
CCAAGACGTAAACATAGAGAATTCGGATGGTGACCGCCACCAGCGGAGGTCACGGGACGATGACAGCATCCGGGGGTCGCCGAGACAAGCAGGCCGAGCGAGCCGAGCCG
AGCAGAGGATGCCGACACCAAAATTGCCGCCCTTGAGGATGAGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTATAGGAATGAGGTCAACAAATCGAACATAATATGGATTACTGACGACAGGGATGCTGTATGGTTCATGTGGAACATTACTAGTGGGATGTCTAGTGACATTTGTGT
TGTTGCTGACCATGCAAGAGGGATGCTCAAAGTGCTTTTTCACAGTGTTTCGGTGTCGGTAACCACGGGTCCACCCTGCAACATAAAGTTAGCAAAAAAAAATTACAAAG
TTGTTGATTACATCGATGTTGACTGTTTGGCTTCATCTGTACGGGGTCGGGAAACACTTAAAGGCAATGGGACTTACTCACGAGGTTTTCTTGCTGAAAACACAAGGAAA
AGGAAACTTGAACCACGAAACCCACGAATAGAGAGCGAACGCGGCGGCGACTGGACGGCGCGACCTCCACAAGAAGAACCGAGAGGGAGGGCGATCGCGGTGCGGGAGAG
AGGGATCCGCGAAGACAAAAACGTGCGAAGATGCGGAGACCCACGCGACAACGGCGACGGCACAACGGGCTCAGGCGGCGGCGACGCTGAACGGAGTAGGCGGCGGTGCG
AGGCTGCAGGCGGCGGCGGCGCGGTTGCTGTGTGGAGGGAGAAGAATAAAAACGCAGGGGAGATGGGGGGAGGGGCACGCACGCACGGGGACCTGTGGATGGTTCGTAAG
TTTGTGGAAAGGCATGAATGTCCTATTGATATAGTAAAAAATGATCATCGTCAAGCCACAGCTTGGTTTGTGGGTGAGCACAAAGAGCTGGTTATTGTTTCCAATGGGCA
TCTTAGTATACCCAATGGTCTTAGGAATAGCTACGATTCTGCAGAGCATGAACTTTGTGAGTGGCACTTATTGAGGAACCTGAAAAAAAGATACAAGTCTAACTTGATTG
ACAATGCATTCCACAATTGTGTTAGGGCGTACACAGCCGTAGATTATGAATATTACATGAGACAATTAGAAGACATAGTCAGCTCTCGCCACGTGCCTGCGACGCGGAGC
GACCGACGTCCTCGAAAAAGGGGTGTTAGCACTCCACAACACCCGTTAAAAACGGCAATTTTGGACCACCCCGATGTACGAGGAGCTGACGAGGACAATCGGGGAGAAAT
CGGGATGGATACGGGCCAAGGAGGCGGAGCCGGCAAGCGGGACGGGCCAAGGCCGAAGGGGTCGGGTTTTTACCCGACCCATGCTCGGCCTCCCATGGCCGAGGCCGAGC
CCGTTCGGTCTCGTCTGGTCCACATCGCCTCTGGCTGCCACGGTTTCGCCTGGTTTGACCTAAAACGCCTCCGAATACCTAAAAACCCTAGGAGGATGAGCAGGTCAGGT
GAGATCCTCTGGCCAAAATCGACCATCAACAGTTGGTGCCGTCTGTGGGGACGAAAGCCTGTTAATCTGCACATCGGTTATTCCATGAGTAAGGGTATGGAGAAGAAAGA
CCAAGACGTAAACATAGAGAATTCGGATGGTGACCGCCACCAGCGGAGGTCACGGGACGATGACAGCATCCGGGGGTCGCCGAGACAAGCAGGCCGAGCGAGCCGAGCCG
AGCAGAGGATGCCGACACCAAAATTGCCGCCCTTGAGGATGAGGTGA
Protein sequenceShow/hide protein sequence
MYRNEVNKSNIIWITDDRDAVWFMWNITSGMSSDICVVADHARGMLKVLFHSVSVSVTTGPPCNIKLAKKNYKVVDYIDVDCLASSVRGRETLKGNGTYSRGFLAENTRK
RKLEPRNPRIESERGGDWTARPPQEEPRGRAIAVRERGIREDKNVRRCGDPRDNGDGTTGSGGGDAERSRRRCEAAGGGGAVAVWREKNKNAGEMGGGARTHGDLWMVRK
FVERHECPIDIVKNDHRQATAWFVGEHKELVIVSNGHLSIPNGLRNSYDSAEHELCEWHLLRNLKKRYKSNLIDNAFHNCVRAYTAVDYEYYMRQLEDIVSSRHVPATRS
DRRPRKRGVSTPQHPLKTAILDHPDVRGADEDNRGEIGMDTGQGGGAGKRDGPRPKGSGFYPTHARPPMAEAEPVRSRLVHIASGCHGFAWFDLKRLRIPKNPRRMSRSG
EILWPKSTINSWCRLWGRKPVNLHIGYSMSKGMEKKDQDVNIENSDGDRHQRRSRDDDSIRGSPRQAGRASRAEQRMPTPKLPPLRMR