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Lag0018715 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0018715
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionSWIM-type domain-containing protein
Genome locationchr5:33139345..33140649
RNA-Seq ExpressionLag0018715
SyntenyLag0018715
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_023875200.1 uncharacterized protein LOC111987710 [Quercus suber]1.5e-1944.63Show/hide
Query:  KKWELAGIPCQHAISSIFYKYDIVENYVDDCYSTSIYEACYAPMIHPINGENLWNHANDDLNPIRPPPMRKQPGRPKKLRRREPDEPRPSTKKPSRCKVV
        KKW+++GIPC HAI+ IF+     E YV  CY  S Y+ACY P+I PING+N+W   + D+ P++PP  R+ PGRPKK R +EP+EP        +CK  
Subjt:  KKWELAGIPCQHAISSIFYKYDIVENYVDDCYSTSIYEACYAPMIHPINGENLWNHANDDLNPIRPPPMRKQPGRPKKLRRREPDEPRPSTKKPSRCKVV

Query:  EYDVPNNRTSSIWQGTNCNLP
             N R+     G N +LP
Subjt:  EYDVPNNRTSSIWQGTNCNLP

XP_023896782.1 uncharacterized protein LOC112008678 [Quercus suber]1.0e-2043.48Show/hide
Query:  KKWELAGIPCQHAISSIFYKYDIVENYVDDCYSTSIYEACYAPMIHPINGENLWNHANDDLNPIRPPPMRKQPGRPKKLRRREPDEPRPSTKK----PSR
        +KW++ GIPC HAIS IF+  +  E Y +DCY  S Y+ACY P+I PING+N+W      L P++PP  R+ PGRPKK R REP+EPR    K      R
Subjt:  KKWELAGIPCQHAISSIFYKYDIVENYVDDCYSTSIYEACYAPMIHPINGENLWNHANDDLNPIRPPPMRKQPGRPKKLRRREPDEPRPSTKK----PSR

Query:  CKVVEYDVPNNRTSSIWQGTNCNLPPQVSVLPSTNVAS
        CK       N R+     G N +LP      P++  +S
Subjt:  CKVVEYDVPNNRTSSIWQGTNCNLPPQVSVLPSTNVAS

XP_023905004.1 uncharacterized protein LOC112016740, partial [Quercus suber]1.5e-1945.45Show/hide
Query:  KKWELAGIPCQHAISSIFYKYDIVENYVDDCYSTSIYEACYAPMIHPINGENLWNHANDDLNPIRPPPMRKQPGRPKKLRRREPDEPRPSTKKPSRCKVV
        +KWE++GIPC HAIS IF+     E YV  CY  S Y+ACY P+I PING+N+W   + D+ P++PP  R+ PGRPKK R +EP+EP        +CK  
Subjt:  KKWELAGIPCQHAISSIFYKYDIVENYVDDCYSTSIYEACYAPMIHPINGENLWNHANDDLNPIRPPPMRKQPGRPKKLRRREPDEPRPSTKKPSRCKVV

Query:  EYDVPNNRTSSIWQGTNCNLP
             N R+     G N +LP
Subjt:  EYDVPNNRTSSIWQGTNCNLP

XP_030936410.1 uncharacterized protein LOC115961597 [Quercus lobata]5.7e-1939.87Show/hide
Query:  DREEHKFGWENINLKKWELAGIPCQHAISSIFYKYDIVENYVDDCYSTSIYEACYAPMIHPINGENLWNHANDDLNPIRPPPMRKQPGRPKKLRRREPDE
        D EE K      + +KW++ GIPC HAIS IF+  +  E YV+ CY  + Y  CY P+I PING+N+W  +   L P++PP  R+ PGRPKK R  EPDE
Subjt:  DREEHKFGWENINLKKWELAGIPCQHAISSIFYKYDIVENYVDDCYSTSIYEACYAPMIHPINGENLWNHANDDLNPIRPPPMRKQPGRPKKLRRREPDE

Query:  PRPSTKK-----PSRCKVVEYDVPNNRTSSIWQGTNCNLPPQVSVLPSTNVASTNTRQ
        PR   KK       +CK+      N R+     G N +LP   S +  T   +    Q
Subjt:  PRPSTKK-----PSRCKVVEYDVPNNRTSSIWQGTNCNLPPQVSVLPSTNVASTNTRQ

XP_030936973.1 uncharacterized protein LOC115962214 [Quercus lobata]2.0e-1941.61Show/hide
Query:  DREEHKFGWENINLKKWELAGIPCQHAISSIFYKYDIVENYVDDCYSTSIYEACYAPMIHPINGENLWNHANDDLNPIRPPPMRKQPGRPKKLRRREPDE
        D EE K      + +KW++ GIPC HAIS IF+  +  E YV+ CY  + Y  CY P+I PING+N+W    + L P++PP  R+ PGRPKK R  EPDE
Subjt:  DREEHKFGWENINLKKWELAGIPCQHAISSIFYKYDIVENYVDDCYSTSIYEACYAPMIHPINGENLWNHANDDLNPIRPPPMRKQPGRPKKLRRREPDE

Query:  PRPSTKK-----PSRCKVVEYDVPNNRTSSIWQGTNCNLPPQVSVLPSTNVASTNTRQVDK
        PR   KK       +CK+ E    N R+     G N +LP       S + AS  TR+  K
Subjt:  PRPSTKK-----PSRCKVVEYDVPNNRTSSIWQGTNCNLPPQVSVLPSTNVASTNTRQVDK

TrEMBL top hitse value%identityAlignment
A0A2N9EMB4 SWIM-type domain-containing protein8.3e-2452.17Show/hide
Query:  ENINLKKWELAGIPCQHAISSIFYKYDIVENYVDDCYSTSIYEACYAPMIHPINGENLWNHANDDLNPIRPPPMRKQPGRPKKLRRREPDEPRP-STKKP
        +N   K+W+L+G+PC HAIS IFY+ +  E+YVD CY  S Y ACY P++ PING ++W      L P+ PP +R+ PGRPKKLRRREPDEPRP S K  
Subjt:  ENINLKKWELAGIPCQHAISSIFYKYDIVENYVDDCYSTSIYEACYAPMIHPINGENLWNHANDDLNPIRPPPMRKQPGRPKKLRRREPDEPRP-STKKP

Query:  SRCKVVEYDVPNNRT
           KV    +  NRT
Subjt:  SRCKVVEYDVPNNRT

A0A2N9EQ17 CCHC-type domain-containing protein7.7e-2246.88Show/hide
Query:  REEHKFGWENINLKKWELAGIPCQHAISSIFYKYDIVENYVDDCYSTSIYEACYAPMIHPINGENLWNHANDDLNPIRPPPMRKQPGRPKKLRRREPDEP
        RE+   G   I   +W+L+G+PC HAIS IF + +  E+YVD CY  S Y ACY P++ PING ++W      L P+ PP +R+ PGRPKKLRRREPD+P
Subjt:  REEHKFGWENINLKKWELAGIPCQHAISSIFYKYDIVENYVDDCYSTSIYEACYAPMIHPINGENLWNHANDDLNPIRPPPMRKQPGRPKKLRRREPDEP

Query:  RPSTKKPS------RCKVVEYDVPNNRT
        RP + K S      +CK    +  N RT
Subjt:  RPSTKKPS------RCKVVEYDVPNNRT

A0A2N9FFQ0 CCHC-type domain-containing protein6.6e-2143.92Show/hide
Query:  EEDLNDDLEHKIVEDFEEEDREEHKFGWENINLKKWELAGIPCQHAISSIFYKYDIVENYVDDCYSTSIYEACYAPMIHPINGENLWNHANDDLNPIRPP
        E DL  ++  K+  +       E K G       +W+L+G+PC HAIS IFY+ +  E+YVD CY  S Y ACY P++ PING ++W      L P+ PP
Subjt:  EEDLNDDLEHKIVEDFEEEDREEHKFGWENINLKKWELAGIPCQHAISSIFYKYDIVENYVDDCYSTSIYEACYAPMIHPINGENLWNHANDDLNPIRPP

Query:  PMRKQPGRPKKLRRREPDEPRPSTKKPS------RCKVVEYDVPNNRT
         +R+ PGRPKKLRRREPDEPRP + K S      +CK    +  N RT
Subjt:  PMRKQPGRPKKLRRREPDEPRPSTKKPS------RCKVVEYDVPNNRT

A0A2N9FLE9 Uncharacterized protein1.1e-2350Show/hide
Query:  ENINLKKWELAGIPCQHAISSIFYKYDIVENYVDDCYSTSIYEACYAPMIHPINGENLWNHANDDLNPIRPPPMRKQPGRPKKLRRREPDEPRPSTKKPS
        +N   K+W+L+G+PC HAIS IFY+ +  E+YVD CY  S Y ACY P++ PING ++W      L P+ PP +R+ PGRPKKLRRREPDEPRP + K S
Subjt:  ENINLKKWELAGIPCQHAISSIFYKYDIVENYVDDCYSTSIYEACYAPMIHPINGENLWNHANDDLNPIRPPPMRKQPGRPKKLRRREPDEPRPSTKKPS

Query:  ------RCKVVEYDVPNNRT
              +CK    +  N RT
Subjt:  ------RCKVVEYDVPNNRT

A0A2N9HUS0 Uncharacterized protein1.1e-2350Show/hide
Query:  ENINLKKWELAGIPCQHAISSIFYKYDIVENYVDDCYSTSIYEACYAPMIHPINGENLWNHANDDLNPIRPPPMRKQPGRPKKLRRREPDEPRPSTKKPS
        +N   K+W+L+G+PC HAIS IFY+ +  E+YVD CY  S Y ACY P++ PING ++W      L P+ PP +R+ PGRPKKLRRREPDEPRP + K S
Subjt:  ENINLKKWELAGIPCQHAISSIFYKYDIVENYVDDCYSTSIYEACYAPMIHPINGENLWNHANDDLNPIRPPPMRKQPGRPKKLRRREPDEPRPSTKKPS

Query:  ------RCKVVEYDVPNNRT
              +CK    +  N RT
Subjt:  ------RCKVVEYDVPNNRT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATATAGTTGCCTTAGCTTTAGTAAATGCAAATACATCCATTGATGTATTTGTTGAGCATGTAGTGCATGAAGATGTAAACATGAGAGATGTCTATTATGAAGAAGC
AGGAGTGGAGCATGAAAGTGAAAATGACCAAATATCTGATAAAGAAGATAGCGTAGAAGATATATCATTTTCTGGTAGTGAGGAGGATTTAAATGATGATCTAGAACATA
AGATAGTCGAGGATTTTGAAGAGGAAGATAGGGAAGAACATAAATTTGGTTGGGAGAACATAAATTTGAAGAAATGGGAGTTGGCTGGAATCCCATGTCAACATGCTATC
AGTTCAATCTTTTACAAGTATGATATAGTTGAAAATTATGTTGATGATTGTTATTCAACATCTATCTATGAAGCATGTTATGCTCCCATGATTCATCCTATTAATGGCGA
GAATTTATGGAACCATGCGAACGATGACCTAAACCCAATTCGCCCTCCACCAATGAGGAAACAACCTGGGAGGCCCAAAAAGTTAAGACGAAGAGAGCCTGATGAACCAC
GACCATCTACCAAGAAACCATCTCGGTGCAAAGTAGTGGAGTACGATGTTCCCAACAATCGTACTTCTTCAATATGGCAAGGAACAAATTGCAATCTTCCACCACAAGTT
TCAGTTTTACCTTCAACTAATGTTGCATCGACTAACACTCGACAAGTGGACAAACTACCAATAAGAGGAAAGTTGAAGAAGAAAGTTAGTAGTGTTCCACTGCTACCAAT
TTGGGATAATAATAGAATTACACATCCGATTCACTCTGATCCACATGGAGCAGAGCATACATCCAAGGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGAATATAGTTGCCTTAGCTTTAGTAAATGCAAATACATCCATTGATGTATTTGTTGAGCATGTAGTGCATGAAGATGTAAACATGAGAGATGTCTATTATGAAGAAGC
AGGAGTGGAGCATGAAAGTGAAAATGACCAAATATCTGATAAAGAAGATAGCGTAGAAGATATATCATTTTCTGGTAGTGAGGAGGATTTAAATGATGATCTAGAACATA
AGATAGTCGAGGATTTTGAAGAGGAAGATAGGGAAGAACATAAATTTGGTTGGGAGAACATAAATTTGAAGAAATGGGAGTTGGCTGGAATCCCATGTCAACATGCTATC
AGTTCAATCTTTTACAAGTATGATATAGTTGAAAATTATGTTGATGATTGTTATTCAACATCTATCTATGAAGCATGTTATGCTCCCATGATTCATCCTATTAATGGCGA
GAATTTATGGAACCATGCGAACGATGACCTAAACCCAATTCGCCCTCCACCAATGAGGAAACAACCTGGGAGGCCCAAAAAGTTAAGACGAAGAGAGCCTGATGAACCAC
GACCATCTACCAAGAAACCATCTCGGTGCAAAGTAGTGGAGTACGATGTTCCCAACAATCGTACTTCTTCAATATGGCAAGGAACAAATTGCAATCTTCCACCACAAGTT
TCAGTTTTACCTTCAACTAATGTTGCATCGACTAACACTCGACAAGTGGACAAACTACCAATAAGAGGAAAGTTGAAGAAGAAAGTTAGTAGTGTTCCACTGCTACCAAT
TTGGGATAATAATAGAATTACACATCCGATTCACTCTGATCCACATGGAGCAGAGCATACATCCAAGGAATGA
Protein sequenceShow/hide protein sequence
MNIVALALVNANTSIDVFVEHVVHEDVNMRDVYYEEAGVEHESENDQISDKEDSVEDISFSGSEEDLNDDLEHKIVEDFEEEDREEHKFGWENINLKKWELAGIPCQHAI
SSIFYKYDIVENYVDDCYSTSIYEACYAPMIHPINGENLWNHANDDLNPIRPPPMRKQPGRPKKLRRREPDEPRPSTKKPSRCKVVEYDVPNNRTSSIWQGTNCNLPPQV
SVLPSTNVASTNTRQVDKLPIRGKLKKKVSSVPLLPIWDNNRITHPIHSDPHGAEHTSKE