; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0018716 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0018716
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase Ty1/copia-type domain-containing protein
Genome locationchr5:33144677..33155780
RNA-Seq ExpressionLag0018716
SyntenyLag0018716
Gene Ontology termsNA
InterPro domainsIPR013103 - Reverse transcriptase, RNA-dependent DNA polymerase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
OMO95913.1 hypothetical protein CCACVL1_05180 [Corchorus capsularis]6.7e-7028.68Show/hide
Query:  VKLDEENFFYWKIQVRAVLRGHGLGHFIDDDALIPPKTIRTSENSSSTVPNPEYEAWIRQDNLITSWFLGSMSNEILSEVLDCETAGDIW-KILN-----
        +KL  +N+  W+ Q  A+L G  L  ++D     P K I   +    T+ NP+Y  W+RQD LI    + S S  +L  V    T+ D W K+L      
Subjt:  VKLDEENFFYWKIQVRAVLRGHGLGHFIDDDALIPPKTIRTSENSSSTVPNPEYEAWIRQDNLITSWFLGSMSNEILSEVLDCETAGDIW-KILN-----

Query:  ------------------------------------DPTGKKISQDDHVMHILNGLRVEYDSTVSVITEKDETPVGFYALK----PVDSKLDEGSLKWCL
                                              TG  I +DD V++ILNGL  E+   +S      ETP+    L       +S L + +  + +
Subjt:  ------------------------------------DPTGKKISQDDHVMHILNGLRVEYDSTVSVITEKDETPVGFYALK----PVDSKLDEGSLKWCL

Query:  RVLNKGSYPLTGPRENYVCSEKNATFLLQRSNNNLLWIIIIRNEELEEPEDLMETIMEE-----DQIPEIRTIMEANHSVNYAVDLVIQFSGVTFVLKDG
        ++ +  +    GP  N+   + N  F    +  N       R      P  +   I ++      Q  +  +   +  S NYA    I   G  + L  G
Subjt:  RVLNKGSYPLTGPRENYVCSEKNATFLLQRSNNNLLWIIIIRNEELEEPEDLMETIMEE-----DQIPEIRTIMEANHSVNYAVDLVIQFSGVTFVLKDG

Query:  ASDHVTSDYSNLTMGSEYTRDNKVHVGNDACLDVLHIGSSIDIFTSRTLFQGKSLPNITASDHDPYSKSLNTSDTVLLPTSSSVVNKHPMVTRAKTGIFK
        ASDHVT+D  NL++ +EY     + +G+         GS    F   +    ++ P+   S+H+ +++                  +H  V   +TG+  
Subjt:  ASDHVTSDYSNLTMGSEYTRDNKVHVGNDACLDVLHIGSSIDIFTSRTLFQGKSLPNITASDHDPYSKSLNTSDTVLLPTSSSVVNKHPMVTRAKTGIFK

Query:  LKILLTDYAEIEPPTVKEALKSPHWVVAIKAEYEALMNNDMWALVNPPIDKKGNGVQMSELKSYASQVVDGTLDMNEDEIFVQVFGPEKHGRVRGYGVGV
        L                               ++A +  + W+          N +    LK  ++           ++ F     P+         + V
Subjt:  LKILLTDYAEIEPPTVKEALKSPHWVVAIKAEYEALMNNDMWALVNPPIDKKGNGVQMSELKSYASQVVDGTLDMNEDEIFVQVFGPEKHGRVRGYGVGV

Query:  TPSELFGSSSNVRDLEHRLNE-SEQHLQESEQQRKVEVNVPSKKVFSTGSISTLFEVKARLVAKGFHQEADLDYIETFSPVIKPTTIRVIFTMALAYGW-
        T + L  S      LE + N+ S + + E   Q +++ N            +++ + KARLVAKGFHQ   +D+ ETFSPV+KPTTIR++ ++A+ + W 
Subjt:  TPSELFGSSSNVRDLEHRLNE-SEQHLQESEQQRKVEVNVPSKKVFSTGSISTLFEVKARLVAKGFHQEADLDYIETFSPVIKPTTIRVIFTMALAYGW-

Query:  -------------TLRKEVFMTQPPGMIDNTKPHMVCKLRKALY------VSYLPAGGLFLSQAKYITDILHKTKMHEANPIATPL-ISGSILSVFHGEP
                     TL ++VFM QP G ID+T P  VC+L+K++Y       ++  A   FL + KY+ D+L ++KM E+ P+ TP+  S + L++  G  
Subjt:  -------------TLRKEVFMTQPPGMIDNTKPHMVCKLRKALY------VSYLPAGGLFLSQAKYITDILHKTKMHEANPIATPL-ISGSILSVFHGEP

Query:  FHDVHLYRSIAGALQYATLTRPEIEYSVNKLCQFMHAPTQSHWQAVKRILRYLIGTLGHGLLFRKPSS-----FRLEGFANAYWASDPVDRKSTSDFCVY
          D   YRSI GALQY +LTRP+I +SVNKL QFMH PT+ HWQ +K ILRYL GTL  GLL     S       L  +A+A WA D  DRKSTS F VY
Subjt:  FHDVHLYRSIAGALQYATLTRPEIEYSVNKLCQFMHAPTQSHWQAVKRILRYLIGTLGHGLLFRKPSS-----FRLEGFANAYWASDPVDRKSTSDFCVY

Query:  PGGNLIAWASKKQHIISLSCSEA
          GNLI+W   KQ  ++ S  EA
Subjt:  PGGNLIAWASKKQHIISLSCSEA

RVW13474.1 Retrovirus-related Pol polyprotein from transposon RE2 [Vitis vinifera]9.4e-8026.52Show/hide
Query:  NETSPSETLNSSQPVKAINPGSKTNTVKLDEENFFYWKIQVRAVLRGHGLGHFIDDDALIPPKTIRTSENSSSTVPNPEYEAWIRQDNLITSWFLGSMSN
        N T+  E+L +      I+P S+  T++L+++NF  W+ Q+  V+RG+GL  F+     +PPK +  ++ +   VPNP++  + RQD+L+ SW + S+ +
Subjt:  NETSPSETLNSSQPVKAINPGSKTNTVKLDEENFFYWKIQVRAVLRGHGLGHFIDDDALIPPKTIRTSENSSSTVPNPEYEAWIRQDNLITSWFLGSMSN

Query:  EILSEVLDCETAGDIWKILND------------------------------------------PTGKKISQDDHVMHILNGLRVEYDSTVSVITEKDETP
          L +V+ C +  ++W  ++                                             G KIS  DH++ I+ GL  EY+S + VI+ K  +P
Subjt:  EILSEVLDCETAGDIWKILND------------------------------------------PTGKKISQDDHVMHILNGLRVEYDSTVSVITEKDETP

Query:  VGFYALKPVDSKL--DEG-----------SLKWCLRVLNKGS--------YPLTG------------PRENYV--------------------CSEKNAT
            +L+ V S L   EG           S+ +  +  N+GS        YP +G             R ++V                    C++   T
Subjt:  VGFYALKPVDSKL--DEG-----------SLKWCLRVLNKGS--------YPLTG------------PRENYV--------------------CSEKNAT

Query:  F--LLQRSNNNLLWIII------------IRNEELEEPEDLMETIMEEDQIPEIRTIMEANHSVNYAVDLVIQFSGVTFVLKDGASDHVTSDYSNLTMGS
              R + N    ++             +N             + E    E +   E    V    DL        +    GA++HVT D  NL  G+
Subjt:  F--LLQRSNNNLLWIII------------IRNEELEEPEDLMETIMEEDQIPEIRTIMEANHSVNYAVDLVIQFSGVTFVLKDGASDHVTSDYSNLTMGS

Query:  EYTRDNKVHVGNDACLDVLHIGSSI-----------------DIFTSRTLF---QGKSLPNI---------------TAS-------DHDPYS------K
        EY  ++K+H+GN   L++ HIG S+                     S+ LF    G SL N+               T+S       D +P S      +
Subjt:  EYTRDNKVHVGNDACLDVLHIGSSI-----------------DIFTSRTLF---QGKSLPNI---------------TAS-------DHDPYS------K

Query:  SLNTSD------------------------TVLLPTSSSVVN-------------KHPMVTRAKTGIFKLKILLTDYAEIEPPTVKEALKSPHWVVAIKA
         L+ +D                        T+ L T+S   N              H M+TR+K GI K K+   D    EP T++E +  P W  A+  
Subjt:  SLNTSD------------------------TVLLPTSSSVVN-------------KHPMVTRAKTGIFKLKILLTDYAEIEPPTVKEALKSPHWVVAIKA

Query:  EYEALMNNDMWALVNPPIDKKGNGVQMSELKSYASQVVDGTLDMNEDEIFVQVFGPEKHGRVRGYGVGVTPSELFGSSSNVRDLEHRLNESEQHLQESEQ
        E+ ALM N  W+LV  P D+   G +                      +F     P+                                           
Subjt:  EYEALMNNDMWALVNPPIDKKGNGVQMSELKSYASQVVDGTLDMNEDEIFVQVFGPEKHGRVRGYGVGVTPSELFGSSSNVRDLEHRLNESEQHLQESEQ

Query:  QRKVEVNVPSKKVFSTGSISTLFEVKARLVAKGFHQEADLDYIETFSPVIKPTTIRVIFTMALAYGWTLR--------------KEVFMTQPPGMIDNTK
                        GSIS     KARLVAKG+ Q +  D+ ETFSPV+KPTTIRV+  +A++  W++R              +EV+M QPPG    T 
Subjt:  QRKVEVNVPSKKVFSTGSISTLFEVKARLVAKGFHQEADLDYIETFSPVIKPTTIRVIFTMALAYGWTLR--------------KEVFMTQPPGMIDNTK

Query:  --PHMVCKLRKALY--------------------------------------------------------------------------------------
            +VCKL KALY                                                                                      
Subjt:  --PHMVCKLRKALY--------------------------------------------------------------------------------------

Query:  VSYLPAGGLFLSQAKYITDILHKTKMHEANPIATPLISGSILSVFHGEPFHDVHLYRSIAGALQYATLTRPEIEYSVNKLCQFMHAPTQSHWQAVKRILR
        V     GGL  SQ KYI D+L KTKM  A  + TP++SG  LS   G P  +V  YRS+ GALQY T+TRPEI +SVNK+CQFM  P  +HW+AVKRILR
Subjt:  VSYLPAGGLFLSQAKYITDILHKTKMHEANPIATPLISGSILSVFHGEPFHDVHLYRSIAGALQYATLTRPEIEYSVNKLCQFMHAPTQSHWQAVKRILR

Query:  YLIGTLGHGLLFRKPSSFRLEGFANAYWASDPVDRKSTSDFCVYPGGNLIAWASKKQHIISLSCSEA
        YL GT   G++ +   +  L  F +A W SD  DR+STS  CV+ G NL++W+SKKQH IS S +EA
Subjt:  YLIGTLGHGLLFRKPSSFRLEGFANAYWASDPVDRKSTSDFCVYPGGNLIAWASKKQHIISLSCSEA

RVW84602.1 Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera]2.7e-7134.32Show/hide
Query:  SKSLNTSDTVLLPT---SSSVVNK--HPMVTRAKTGIFKLKILLTDYAEI-----EPPTVKEALKSPHWVVAIKAEYEALMNNDMWALVNPPIDKKGNGV
        S S+++S+   +PT   SSS V    HPM TRAK GIFK KI L+    I     EP + KEA+K P W  A+  E+EALM+N  W LV+PP ++   G 
Subjt:  SKSLNTSDTVLLPT---SSSVVNK--HPMVTRAKTGIFKLKILLTDYAEI-----EPPTVKEALKSPHWVVAIKAEYEALMNNDMWALVNPPIDKKGNGV

Query:  QMSELKSYASQVVDGTLDMNEDEIFVQVFGPEKHGRVRGYGVGVTPSELFGSSSNVRDLEHRLNESEQHLQESEQQRKVEVNVPSKKVFSTGSISTLFEV
        +      Y     DGT++                                                                                  
Subjt:  QMSELKSYASQVVDGTLDMNEDEIFVQVFGPEKHGRVRGYGVGVTPSELFGSSSNVRDLEHRLNESEQHLQESEQQRKVEVNVPSKKVFSTGSISTLFEV

Query:  KARLVAKGFHQEADLDYIETFSPVIKPTTIRVIFTMALAYGWTLR--------------KEVFMTQPPGMIDNTKPHMVCKLRKALY-------------
        KARLVAKGFHQ  D DY ETFSPV+KPTTIRV+ ++AL+  W++R              ++VFMTQPPG +D +KP+ VCKL KALY             
Subjt:  KARLVAKGFHQEADLDYIETFSPVIKPTTIRVIFTMALAYGWTLR--------------KEVFMTQPPGMIDNTKPHMVCKLRKALY-------------

Query:  -----------------------------------------------------------------------VSYLPAG-GLFLSQAKYITDILHKTKMHE
                                                                               +  L +G  L+LSQAKYI D+L +  + E
Subjt:  -----------------------------------------------------------------------VSYLPAG-GLFLSQAKYITDILHKTKMHE

Query:  ANPIATPLISGSILSVFHGEPFHDVHLYRSIAGALQYATLTRPEIEYSVNKLCQFMHAPTQSHWQAVKRILRYLIGTLGHGLLFRKPSSFRLEGFANAYW
        +  +A+P+ +G +LS+  G    D  LYRS+ GALQY T+T+P+I Y+VNKLCQFMHAPT +H QAVKR+LRYL G+L +GL F+  SS  L  + +A W
Subjt:  ANPIATPLISGSILSVFHGEPFHDVHLYRSIAGALQYATLTRPEIEYSVNKLCQFMHAPTQSHWQAVKRILRYLIGTLGHGLLFRKPSSFRLEGFANAYW

Query:  ASDPVDRKSTSDFCVYPGGNLIAWASKKQHIISLSCSEA
        AS P DR+STS +C+Y GGNL++W++ KQ ++S S +E+
Subjt:  ASDPVDRKSTSDFCVYPGGNLIAWASKKQHIISLSCSEA

RVX14937.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]3.3e-6935.29Show/hide
Query:  NKHPMVTRAKTGIFKLKILLTDYAEIEPPTVKEALKSPHWVVAIKAEYEALMNNDMWALVNPPIDKKGNGVQMSELKSYASQVVDGTLDMNEDEIFVQVF
        N HPM+TRAK+GI K KI +   A  EP +V  AL+   W  A+ AEY+AL  N+ W+LV  P  ++  G +                       +V   
Subjt:  NKHPMVTRAKTGIFKLKILLTDYAEIEPPTVKEALKSPHWVVAIKAEYEALMNNDMWALVNPPIDKKGNGVQMSELKSYASQVVDGTLDMNEDEIFVQVF

Query:  GPEKHGRVRGYGVGVTPSELFGSSSNVRDLEHRLNESEQHLQESEQQRKVEVNVPSKKVFSTGSISTLFEVKARLVAKGFHQEADLDYIETFSPVIKPTT
             G V+ Y                                                            KARLVAKGFHQ+A  D+ ETFSPV+KP+T
Subjt:  GPEKHGRVRGYGVGVTPSELFGSSSNVRDLEHRLNESEQHLQESEQQRKVEVNVPSKKVFSTGSISTLFEVKARLVAKGFHQEADLDYIETFSPVIKPTT

Query:  IRVIFTMALAYGWT--------------LRKEVFMTQPPGMIDNTKPHMVCKLRKALY--------------------------------VSYLPA----
        IRV+FT+AL+  W               L++EVFM QP G ID   P++VC+L KALY                                + + P+    
Subjt:  IRVIFTMALAYGWT--------------LRKEVFMTQPPGMIDNTKPHMVCKLRKALY--------------------------------VSYLPA----

Query:  -------------------------------------------------GGLFLSQAKYITDILHKTKMHEANPIATPLISGSILSVFHGEPFHDVHLYR
                                                          GL LSQ KYI D+L KTKM    P  TPL +G  L    G+P  D+H YR
Subjt:  -------------------------------------------------GGLFLSQAKYITDILHKTKMHEANPIATPLISGSILSVFHGEPFHDVHLYR

Query:  SIAGALQYATLTRPEIEYSVNKLCQFMHAPTQSHWQAVKRILRYLIGTLGHGLLFRKPSSFRLEGFANAYWASDPVDRKSTSDFCVYPGGNLIAWASKKQ
        S  GALQY T+TRPE+ +SVNK+CQFM  PT+ HW+AVKRILRYL GTL HGL  +K S+  L GF +A WASD  DR+STS  CV+ G NLI+W SKKQ
Subjt:  SIAGALQYATLTRPEIEYSVNKLCQFMHAPTQSHWQAVKRILRYLIGTLGHGLLFRKPSSFRLEGFANAYWASDPVDRKSTSDFCVYPGGNLIAWASKKQ

Query:  HIISLSCSEA
        H +S S +EA
Subjt:  HIISLSCSEA

XP_019080407.1 PREDICTED: uncharacterized protein LOC109123862 [Vitis vinifera]2.6e-7728.23Show/hide
Query:  TVKLDEENFFYWKIQVRAVLRGHGLGHFI--DDDAL--IPPKTIRTSE---NSSSTVPNPEYEAWIRQDNLITSWFL----------------GSMSNEI
        +VKLD +NF  WK Q+ + +RG+GL  F+  DD+      P+ +R  E    +SS   +  +  W R +    S                   GS  +E 
Subjt:  TVKLDEENFFYWKIQVRAVLRGHGLGHFI--DDDAL--IPPKTIRTSE---NSSSTVPNPEYEAWIRQDNLITSWFL----------------GSMSNEI

Query:  LSEVLDCETAGDIWKILNDPTGKKISQDDHVMHILNGLRVEYDSTV-SVITEKDETPV------------------------------------------
        L+++  C  +           G  +S  DHV  IL+GL  +Y+S V SVI   D+  V                                          
Subjt:  LSEVLDCETAGDIWKILNDPTGKKISQDDHVMHILNGLRVEYDSTV-SVITEKDETPV------------------------------------------

Query:  -----------------------------GFYALKPVDSKLDEGSLKWCLRVL-NKGSYPLTGPRENYVCSEKNATFLLQRSNNNLLWIIIIRNEELEEP
                                     GFY  +  +   +  S +   R   NKGS+    P  +   +EK A  L  +  + +       +   + P
Subjt:  -----------------------------GFYALKPVDSKLDEGSLKWCLRVL-NKGSYPLTGPRENYVCSEKNATFLLQRSNNNLLWIIIIRNEELEEP

Query:  EDLMETIMEEDQIPEIRTIMEANHSVNYAVDLVIQFSGVTFVLKDGASDHVTSDYSNLTMGSEYTRDNKVHVGNDACLDVLHIGSSIDIFTSRTLFQGKS
        ++L        +    R     +  VN  +     FS   +    GAS+HVT +  NL   +E+   N+VHVGN         G++     S T+    +
Subjt:  EDLMETIMEEDQIPEIRTIMEANHSVNYAVDLVIQFSGVTFVLKDGASDHVTSDYSNLTMGSEYTRDNKVHVGNDACLDVLHIGSSIDIFTSRTLFQGKS

Query:  LPNITA---SDHD----PYSKSLNTSDTVLLPTS--------------SSVV-------------NKHPMVTRAKTGIFKLKILLTDYAEIEPPTVKEAL
         P  +A   S+ D     +  + N++DT L P                SS+              N HPM+TRAK+GI K KI +   A  EP +V  AL
Subjt:  LPNITA---SDHD----PYSKSLNTSDTVLLPTS--------------SSVV-------------NKHPMVTRAKTGIFKLKILLTDYAEIEPPTVKEAL

Query:  KSPHWVVAIKAEYEALMNNDMWALVNPPIDKKGNGVQMSELKSYASQVVDGTLDMNEDEIFVQVFGPEKHGRVRGYGVGVTPSELFGSSSNVRDLEHRLN
        +   W  A+ AEY+AL  N+ W+LV  P  ++  G +                       +V        G V+ Y                        
Subjt:  KSPHWVVAIKAEYEALMNNDMWALVNPPIDKKGNGVQMSELKSYASQVVDGTLDMNEDEIFVQVFGPEKHGRVRGYGVGVTPSELFGSSSNVRDLEHRLN

Query:  ESEQHLQESEQQRKVEVNVPSKKVFSTGSISTLFEVKARLVAKGFHQEADLDYIETFSPVIKPTTIRVIFTMALAYGWT--------------LRKEVFM
                                            KARLVAKGFHQ+A  D+ ETFSPV+KP+T+RV+FT+AL+  W               L++EVFM
Subjt:  ESEQHLQESEQQRKVEVNVPSKKVFSTGSISTLFEVKARLVAKGFHQEADLDYIETFSPVIKPTTIRVIFTMALAYGWT--------------LRKEVFM

Query:  TQPPGMIDNTKPHMVCKLRKALY---------------------------------------VSYL----------------------------------
         QP G ID   P++VC+L KALY                                       ++Y+                                  
Subjt:  TQPPGMIDNTKPHMVCKLRKALY---------------------------------------VSYL----------------------------------

Query:  ------------PAGGLFLSQAKYITDILHKTKMHEANPIATPLISGSILSVFHGEPFHDVHLYRSIAGALQYATLTRPEIEYSVNKLCQFMHAPTQSHW
                       GL LSQ KYI D+L KTKM    P  TPL +G  L V  G+P  D+H YRS  GALQY T+TRPE+ +SVNK+CQFM  PT+ HW
Subjt:  ------------PAGGLFLSQAKYITDILHKTKMHEANPIATPLISGSILSVFHGEPFHDVHLYRSIAGALQYATLTRPEIEYSVNKLCQFMHAPTQSHW

Query:  QAVKRILRYLIGTLGHGLLFRKPSSFRLEGFANAYWASDPVDRKSTSDFCVYPGGNLIAWASKKQHIISLSCSE
        + VKRILRYL GTL HGL  +K S+  L GF +A WASD  DR+STS  CV+ G NLI+W SKKQHI+S S  E
Subjt:  QAVKRILRYLIGTLGHGLLFRKPSSFRLEGFANAYWASDPVDRKSTSDFCVYPGGNLIAWASKKQHIISLSCSE

TrEMBL top hitse value%identityAlignment
A0A1R3JM66 Uncharacterized protein3.3e-7028.68Show/hide
Query:  VKLDEENFFYWKIQVRAVLRGHGLGHFIDDDALIPPKTIRTSENSSSTVPNPEYEAWIRQDNLITSWFLGSMSNEILSEVLDCETAGDIW-KILN-----
        +KL  +N+  W+ Q  A+L G  L  ++D     P K I   +    T+ NP+Y  W+RQD LI    + S S  +L  V    T+ D W K+L      
Subjt:  VKLDEENFFYWKIQVRAVLRGHGLGHFIDDDALIPPKTIRTSENSSSTVPNPEYEAWIRQDNLITSWFLGSMSNEILSEVLDCETAGDIW-KILN-----

Query:  ------------------------------------DPTGKKISQDDHVMHILNGLRVEYDSTVSVITEKDETPVGFYALK----PVDSKLDEGSLKWCL
                                              TG  I +DD V++ILNGL  E+   +S      ETP+    L       +S L + +  + +
Subjt:  ------------------------------------DPTGKKISQDDHVMHILNGLRVEYDSTVSVITEKDETPVGFYALK----PVDSKLDEGSLKWCL

Query:  RVLNKGSYPLTGPRENYVCSEKNATFLLQRSNNNLLWIIIIRNEELEEPEDLMETIMEE-----DQIPEIRTIMEANHSVNYAVDLVIQFSGVTFVLKDG
        ++ +  +    GP  N+   + N  F    +  N       R      P  +   I ++      Q  +  +   +  S NYA    I   G  + L  G
Subjt:  RVLNKGSYPLTGPRENYVCSEKNATFLLQRSNNNLLWIIIIRNEELEEPEDLMETIMEE-----DQIPEIRTIMEANHSVNYAVDLVIQFSGVTFVLKDG

Query:  ASDHVTSDYSNLTMGSEYTRDNKVHVGNDACLDVLHIGSSIDIFTSRTLFQGKSLPNITASDHDPYSKSLNTSDTVLLPTSSSVVNKHPMVTRAKTGIFK
        ASDHVT+D  NL++ +EY     + +G+         GS    F   +    ++ P+   S+H+ +++                  +H  V   +TG+  
Subjt:  ASDHVTSDYSNLTMGSEYTRDNKVHVGNDACLDVLHIGSSIDIFTSRTLFQGKSLPNITASDHDPYSKSLNTSDTVLLPTSSSVVNKHPMVTRAKTGIFK

Query:  LKILLTDYAEIEPPTVKEALKSPHWVVAIKAEYEALMNNDMWALVNPPIDKKGNGVQMSELKSYASQVVDGTLDMNEDEIFVQVFGPEKHGRVRGYGVGV
        L                               ++A +  + W+          N +    LK  ++           ++ F     P+         + V
Subjt:  LKILLTDYAEIEPPTVKEALKSPHWVVAIKAEYEALMNNDMWALVNPPIDKKGNGVQMSELKSYASQVVDGTLDMNEDEIFVQVFGPEKHGRVRGYGVGV

Query:  TPSELFGSSSNVRDLEHRLNE-SEQHLQESEQQRKVEVNVPSKKVFSTGSISTLFEVKARLVAKGFHQEADLDYIETFSPVIKPTTIRVIFTMALAYGW-
        T + L  S      LE + N+ S + + E   Q +++ N            +++ + KARLVAKGFHQ   +D+ ETFSPV+KPTTIR++ ++A+ + W 
Subjt:  TPSELFGSSSNVRDLEHRLNE-SEQHLQESEQQRKVEVNVPSKKVFSTGSISTLFEVKARLVAKGFHQEADLDYIETFSPVIKPTTIRVIFTMALAYGW-

Query:  -------------TLRKEVFMTQPPGMIDNTKPHMVCKLRKALY------VSYLPAGGLFLSQAKYITDILHKTKMHEANPIATPL-ISGSILSVFHGEP
                     TL ++VFM QP G ID+T P  VC+L+K++Y       ++  A   FL + KY+ D+L ++KM E+ P+ TP+  S + L++  G  
Subjt:  -------------TLRKEVFMTQPPGMIDNTKPHMVCKLRKALY------VSYLPAGGLFLSQAKYITDILHKTKMHEANPIATPL-ISGSILSVFHGEP

Query:  FHDVHLYRSIAGALQYATLTRPEIEYSVNKLCQFMHAPTQSHWQAVKRILRYLIGTLGHGLLFRKPSS-----FRLEGFANAYWASDPVDRKSTSDFCVY
          D   YRSI GALQY +LTRP+I +SVNKL QFMH PT+ HWQ +K ILRYL GTL  GLL     S       L  +A+A WA D  DRKSTS F VY
Subjt:  FHDVHLYRSIAGALQYATLTRPEIEYSVNKLCQFMHAPTQSHWQAVKRILRYLIGTLGHGLLFRKPSS-----FRLEGFANAYWASDPVDRKSTSDFCVY

Query:  PGGNLIAWASKKQHIISLSCSEA
          GNLI+W   KQ  ++ S  EA
Subjt:  PGGNLIAWASKKQHIISLSCSEA

A0A2N9HY12 Uncharacterized protein1.1e-7027.18Show/hide
Query:  TVKLDEENFFYWKIQVRAVLRGHGLGHFIDDDALIPPKTIRTSENSSSTVPNPEYEAWIRQDNLITSWFLGSMSNEILSEVLDCETAGDIWKILNDPTGK
        T+KL  EN+  WK Q+   LRG  L  F+D     P   +   + SS + PNP ++AW+ QD +I S  + S+S  IL+ V+ C T+ D+W  L    G 
Subjt:  TVKLDEENFFYWKIQVRAVLRGHGLGHFIDDDALIPPKTIRTSENSSSTVPNPEYEAWIRQDNLITSWFLGSMSNEILSEVLDCETAGDIWKILNDPTGK

Query:  KISQDDHVMHILNGLRVEYDSTVSVITEKDE---TPVGFYALKPVDSKLDEGSLKWCL--------RVLNKGSYPLTGPRENYVCSEKNATFLLQRSNNN
          S  D+  H+         +    ++E+++   + +   A    +S +    ++  L         +L++    +  P    +C  +  T      N+ 
Subjt:  KISQDDHVMHILNGLRVEYDSTVSVITEKDE---TPVGFYALKPVDSKLDEGSLKWCL--------RVLNKGSYPLTGPRENYVCSEKNATFLLQRSNNN

Query:  LLWIII-IRNEELEEPEDLMETIMEEDQI---------PEIRTIMEANHSVNYAVDLVIQFSGVTFVLKD-GASDHVTSDYSNLTM-GSEYTRDNKVHVG
        L W ++ I   +L  P  L   +     I         P++  ++  + S   A+    Q +       D GA+ H+T+D +NL +   EY   + + VG
Subjt:  LLWIII-IRNEELEEPEDLMETIMEEDQI---------PEIRTIMEANHSVNYAVDLVIQFSGVTFVLKD-GASDHVTSDYSNLTM-GSEYTRDNKVHVG

Query:  NDACLDVLHIGS------------SIDIFTSRTLFQGKS------LPNITASDHDPYSKSLNTSDTVLLPTSS--SVVNKHPMVTRAKTGIFKLKILLTD
        N   L + H+G+            + D  T RTL  G S       P      H   S    T+     P S   S++  +P+++     I     +   
Subjt:  NDACLDVLHIGS------------SIDIFTSRTLFQGKS------LPNITASDHDPYSKSLNTSDTVLLPTSS--SVVNKHPMVTRAKTGIFKLKILLTD

Query:  YAEIEPPTVKEALKSPHWVVAIKAEYEALMNNDM----WALVN------------------------PPIDKKGNGVQMSELKSYASQ---VVDGTLDMN
         A   P    E   +P+      A+ E +++         L N                        PP     +   M+  K+  S+     DGT+   
Subjt:  YAEIEPPTVKEALKSPHWVVAIKAEYEALMNNDM----WALVN------------------------PPIDKKGNGVQMSELKSYASQ---VVDGTLDMN

Query:  EDEIFVQV-FGPEKHGRVRGYGVGVTPSELFGSSSNVRDLEHRLNESEQHLQESEQQRKVEVN-----VPSKKVF--STGSISTLFEVKARLVAKGFHQE
             + V  GP          + V+    F  +   R+  H +N     L  ++    V  +     +  K VF     +  T+   KARLVAKGFHQ+
Subjt:  EDEIFVQV-FGPEKHGRVRGYGVGVTPSELFGSSSNVRDLEHRLNESEQHLQESEQQRKVEVN-----VPSKKVF--STGSISTLFEVKARLVAKGFHQE

Query:  ADLDYIETFSPVIKPTTIRVIFTMALAYGW--------------TLRKEVFMTQPPGMIDNTKPHMVCKLRKALY-VSYLPAG-----------------
          +DY ET+SPVIKPTT+R + ++A++ GW              TL++EVFM+QPPG      P+ VCKL++A+Y +   P                   
Subjt:  ADLDYIETFSPVIKPTTIRVIFTMALAYGW--------------TLRKEVFMTQPPGMIDNTKPHMVCKLRKALY-VSYLPAG-----------------

Query:  -------------------------------------------------------------------GLFLSQAKYITDILHKTKMHEANPIATPLISGS
                                                                           G+ LSQ +YI D+LH+TKM EA PI TP+ S S
Subjt:  -------------------------------------------------------------------GLFLSQAKYITDILHKTKMHEANPIATPLISGS

Query:  ILSVFHGEPFHDVHLYRSIAGALQYATLTRPEIEYSVNKLCQFMHAPTQSHWQAVKRILRYLIGTLGHGLLFRKPSSFRLEGFANAYWASDPVDRKSTSD
         LS F GE F D+ LYRS  GALQY  LTRP+I ++VNKL QFM  P   HWQ VKR+LRYL  TL  GL   + SS  ++ F++A WA    DR+ST  
Subjt:  ILSVFHGEPFHDVHLYRSIAGALQYATLTRPEIEYSVNKLCQFMHAPTQSHWQAVKRILRYLIGTLGHGLLFRKPSSFRLEGFANAYWASDPVDRKSTSD

Query:  FCVYPGGNLIAWASKKQHIISLSCSEA
        +C++ G NLI+W+ KKQ  ++ S +EA
Subjt:  FCVYPGGNLIAWASKKQHIISLSCSEA

A0A2N9ID99 Reverse transcriptase Ty1/copia-type domain-containing protein8.0e-7728.46Show/hide
Query:  TVKLDEENFFYWKIQVRAVLRGHGLGHFIDDDALIP-PKTIRTSENSSSTVPNPEYEAWIRQDNLITSWFLGSMSNEILSEVLDCETAGDIWKILNDP-T
        T+KL  EN+  WK QV   LRG  L  F+D  + IP P    +S+  S+T+ NPE+  W  QD ++ S  + S+S ++++ V+ C T+ D+W  L    T
Subjt:  TVKLDEENFFYWKIQVRAVLRGHGLGHFIDDDALIP-PKTIRTSENSSSTVPNPEYEAWIRQDNLITSWFLGSMSNEILSEVLDCETAGDIWKILNDP-T

Query:  GKKISQDDHVMHILNGLRVEYDSTVSVITEKDETPVGFY-ALKPVDSKLDE-----GSLKWC-LRVLNKGSYPLTGPRENYVCSEKN----ATFLLQRSN
         +  ++   + + L+ LR    S    I++  +T  G    L  +D  L E      SL+      +++G++  +G    +  S  N    +T    RSN
Subjt:  GKKISQDDHVMHILNGLRVEYDSTVSVITEKDETPVGFY-ALKPVDSKLDE-----GSLKWC-LRVLNKGSYPLTGPRENYVCSEKN----ATFLLQRSN

Query:  NNLLWIIIIRNEELEEPEDLMETIMEEDQIPEIRTIMEANHSVNY----AVDLVIQFS------GVTFVLKDGASDHVTSDYSNLTMGS-EYTRDNKVHV
                 R      P +        ++   +          +Y    + D+   FS         +    GA++H+TSD +NL + S EY   +++ V
Subjt:  NNLLWIIIIRNEELEEPEDLMETIMEEDQIPEIRTIMEANHSVNY----AVDLVIQFS------GVTFVLKDGASDHVTSDYSNLTMGS-EYTRDNKVHV

Query:  GNDACLDVLHIGSSIDIFTSRTLFQGKSLPNITASDHDPYSKSLNTSDTVLLPTSSSVVNKHPMVTRAKTGIFKLK---------------ILLTDYAEI
        GN   L V H  +++   +S    Q +  P   AS   P           + P+ S     HPM+TR+K  I K K               +  T  + I
Subjt:  GNDACLDVLHIGSSIDIFTSRTLFQGKSLPNITASDHDPYSKSLNTSDTVLLPTSSSVVNKHPMVTRAKTGIFKLK---------------ILLTDYAEI

Query:  EPPTVKEALKSPHWVVAIKAEYEALMNNDMWALVNPPIDKKGNGVQMSELKSYASQVVDGTLDMNEDEIFVQVFGPEKHGRVRGYGVGVTPSELFGSSSN
        EP     A+K P W  A+  E++AL+ N  W LV                                                               S+ 
Subjt:  EPPTVKEALKSPHWVVAIKAEYEALMNNDMWALVNPPIDKKGNGVQMSELKSYASQVVDGTLDMNEDEIFVQVFGPEKHGRVRGYGVGVTPSELFGSSSN

Query:  VRDLEHRLNESEQHLQESEQQRKVEVNVPSKKVF-----STGSISTLFEVKARLVAKGFHQEADLDYIETFSPVIKPTTIRVIFTMALAYGWTLR-----
         R+L                       V  K VF     + GSI      KARLVAKGFHQ+  +DY ETFSPV+KPTT+R + ++AL+  W +R     
Subjt:  VRDLEHRLNESEQHLQESEQQRKVEVNVPSKKVF-----STGSISTLFEVKARLVAKGFHQEADLDYIETFSPVIKPTTIRVIFTMALAYGWTLR-----

Query:  ---------KEVFMTQPPGMIDNTKPHMVCKLRKALY---------------------------------------------------------------
                 +EV+MTQPPG      P+ VCKL+KALY                                                               
Subjt:  ---------KEVFMTQPPGMIDNTKPHMVCKLRKALY---------------------------------------------------------------

Query:  ---------------------VSYLP-AGGLFLSQAKYITDILHKTKMHEANPIATPLISGSILSVFHGEPFHDVHLYRSIAGALQYATLTRPEIEYSVN
                             +  +P   G+ LSQ KYI DIL +TKM EA P+++P+ S + LSV  G+P  D  LYRS  G LQY ++TRP+I +SVN
Subjt:  ---------------------VSYLP-AGGLFLSQAKYITDILHKTKMHEANPIATPLISGSILSVFHGEPFHDVHLYRSIAGALQYATLTRPEIEYSVN

Query:  KLCQFMHAPTQSHWQAVKRILRYLIGTLGHGLLFRKPSSFRLEGFANAYWASDPVDRKSTSDFCVYPGGNLIAWASKKQHIISLSCSEA
        KL QFMH PT  HWQ+VKR+LRYL  T+  GL  +  S+  L+GF +A WA D  DR+ST  +C++ G NL++W+ KKQ  ++ S +EA
Subjt:  KLCQFMHAPTQSHWQAVKRILRYLIGTLGHGLLFRKPSSFRLEGFANAYWASDPVDRKSTSDFCVYPGGNLIAWASKKQHIISLSCSEA

A0A438BR80 Retrovirus-related Pol polyprotein from transposon RE24.5e-8026.52Show/hide
Query:  NETSPSETLNSSQPVKAINPGSKTNTVKLDEENFFYWKIQVRAVLRGHGLGHFIDDDALIPPKTIRTSENSSSTVPNPEYEAWIRQDNLITSWFLGSMSN
        N T+  E+L +      I+P S+  T++L+++NF  W+ Q+  V+RG+GL  F+     +PPK +  ++ +   VPNP++  + RQD+L+ SW + S+ +
Subjt:  NETSPSETLNSSQPVKAINPGSKTNTVKLDEENFFYWKIQVRAVLRGHGLGHFIDDDALIPPKTIRTSENSSSTVPNPEYEAWIRQDNLITSWFLGSMSN

Query:  EILSEVLDCETAGDIWKILND------------------------------------------PTGKKISQDDHVMHILNGLRVEYDSTVSVITEKDETP
          L +V+ C +  ++W  ++                                             G KIS  DH++ I+ GL  EY+S + VI+ K  +P
Subjt:  EILSEVLDCETAGDIWKILND------------------------------------------PTGKKISQDDHVMHILNGLRVEYDSTVSVITEKDETP

Query:  VGFYALKPVDSKL--DEG-----------SLKWCLRVLNKGS--------YPLTG------------PRENYV--------------------CSEKNAT
            +L+ V S L   EG           S+ +  +  N+GS        YP +G             R ++V                    C++   T
Subjt:  VGFYALKPVDSKL--DEG-----------SLKWCLRVLNKGS--------YPLTG------------PRENYV--------------------CSEKNAT

Query:  F--LLQRSNNNLLWIII------------IRNEELEEPEDLMETIMEEDQIPEIRTIMEANHSVNYAVDLVIQFSGVTFVLKDGASDHVTSDYSNLTMGS
              R + N    ++             +N             + E    E +   E    V    DL        +    GA++HVT D  NL  G+
Subjt:  F--LLQRSNNNLLWIII------------IRNEELEEPEDLMETIMEEDQIPEIRTIMEANHSVNYAVDLVIQFSGVTFVLKDGASDHVTSDYSNLTMGS

Query:  EYTRDNKVHVGNDACLDVLHIGSSI-----------------DIFTSRTLF---QGKSLPNI---------------TAS-------DHDPYS------K
        EY  ++K+H+GN   L++ HIG S+                     S+ LF    G SL N+               T+S       D +P S      +
Subjt:  EYTRDNKVHVGNDACLDVLHIGSSI-----------------DIFTSRTLF---QGKSLPNI---------------TAS-------DHDPYS------K

Query:  SLNTSD------------------------TVLLPTSSSVVN-------------KHPMVTRAKTGIFKLKILLTDYAEIEPPTVKEALKSPHWVVAIKA
         L+ +D                        T+ L T+S   N              H M+TR+K GI K K+   D    EP T++E +  P W  A+  
Subjt:  SLNTSD------------------------TVLLPTSSSVVN-------------KHPMVTRAKTGIFKLKILLTDYAEIEPPTVKEALKSPHWVVAIKA

Query:  EYEALMNNDMWALVNPPIDKKGNGVQMSELKSYASQVVDGTLDMNEDEIFVQVFGPEKHGRVRGYGVGVTPSELFGSSSNVRDLEHRLNESEQHLQESEQ
        E+ ALM N  W+LV  P D+   G +                      +F     P+                                           
Subjt:  EYEALMNNDMWALVNPPIDKKGNGVQMSELKSYASQVVDGTLDMNEDEIFVQVFGPEKHGRVRGYGVGVTPSELFGSSSNVRDLEHRLNESEQHLQESEQ

Query:  QRKVEVNVPSKKVFSTGSISTLFEVKARLVAKGFHQEADLDYIETFSPVIKPTTIRVIFTMALAYGWTLR--------------KEVFMTQPPGMIDNTK
                        GSIS     KARLVAKG+ Q +  D+ ETFSPV+KPTTIRV+  +A++  W++R              +EV+M QPPG    T 
Subjt:  QRKVEVNVPSKKVFSTGSISTLFEVKARLVAKGFHQEADLDYIETFSPVIKPTTIRVIFTMALAYGWTLR--------------KEVFMTQPPGMIDNTK

Query:  --PHMVCKLRKALY--------------------------------------------------------------------------------------
            +VCKL KALY                                                                                      
Subjt:  --PHMVCKLRKALY--------------------------------------------------------------------------------------

Query:  VSYLPAGGLFLSQAKYITDILHKTKMHEANPIATPLISGSILSVFHGEPFHDVHLYRSIAGALQYATLTRPEIEYSVNKLCQFMHAPTQSHWQAVKRILR
        V     GGL  SQ KYI D+L KTKM  A  + TP++SG  LS   G P  +V  YRS+ GALQY T+TRPEI +SVNK+CQFM  P  +HW+AVKRILR
Subjt:  VSYLPAGGLFLSQAKYITDILHKTKMHEANPIATPLISGSILSVFHGEPFHDVHLYRSIAGALQYATLTRPEIEYSVNKLCQFMHAPTQSHWQAVKRILR

Query:  YLIGTLGHGLLFRKPSSFRLEGFANAYWASDPVDRKSTSDFCVYPGGNLIAWASKKQHIISLSCSEA
        YL GT   G++ +   +  L  F +A W SD  DR+STS  CV+ G NL++W+SKKQH IS S +EA
Subjt:  YLIGTLGHGLLFRKPSSFRLEGFANAYWASDPVDRKSTSDFCVYPGGNLIAWASKKQHIISLSCSEA

A0A438HJI6 Retrovirus-related Pol polyprotein from transposon RE11.3e-7134.32Show/hide
Query:  SKSLNTSDTVLLPT---SSSVVNK--HPMVTRAKTGIFKLKILLTDYAEI-----EPPTVKEALKSPHWVVAIKAEYEALMNNDMWALVNPPIDKKGNGV
        S S+++S+   +PT   SSS V    HPM TRAK GIFK KI L+    I     EP + KEA+K P W  A+  E+EALM+N  W LV+PP ++   G 
Subjt:  SKSLNTSDTVLLPT---SSSVVNK--HPMVTRAKTGIFKLKILLTDYAEI-----EPPTVKEALKSPHWVVAIKAEYEALMNNDMWALVNPPIDKKGNGV

Query:  QMSELKSYASQVVDGTLDMNEDEIFVQVFGPEKHGRVRGYGVGVTPSELFGSSSNVRDLEHRLNESEQHLQESEQQRKVEVNVPSKKVFSTGSISTLFEV
        +      Y     DGT++                                                                                  
Subjt:  QMSELKSYASQVVDGTLDMNEDEIFVQVFGPEKHGRVRGYGVGVTPSELFGSSSNVRDLEHRLNESEQHLQESEQQRKVEVNVPSKKVFSTGSISTLFEV

Query:  KARLVAKGFHQEADLDYIETFSPVIKPTTIRVIFTMALAYGWTLR--------------KEVFMTQPPGMIDNTKPHMVCKLRKALY-------------
        KARLVAKGFHQ  D DY ETFSPV+KPTTIRV+ ++AL+  W++R              ++VFMTQPPG +D +KP+ VCKL KALY             
Subjt:  KARLVAKGFHQEADLDYIETFSPVIKPTTIRVIFTMALAYGWTLR--------------KEVFMTQPPGMIDNTKPHMVCKLRKALY-------------

Query:  -----------------------------------------------------------------------VSYLPAG-GLFLSQAKYITDILHKTKMHE
                                                                               +  L +G  L+LSQAKYI D+L +  + E
Subjt:  -----------------------------------------------------------------------VSYLPAG-GLFLSQAKYITDILHKTKMHE

Query:  ANPIATPLISGSILSVFHGEPFHDVHLYRSIAGALQYATLTRPEIEYSVNKLCQFMHAPTQSHWQAVKRILRYLIGTLGHGLLFRKPSSFRLEGFANAYW
        +  +A+P+ +G +LS+  G    D  LYRS+ GALQY T+T+P+I Y+VNKLCQFMHAPT +H QAVKR+LRYL G+L +GL F+  SS  L  + +A W
Subjt:  ANPIATPLISGSILSVFHGEPFHDVHLYRSIAGALQYATLTRPEIEYSVNKLCQFMHAPTQSHWQAVKRILRYLIGTLGHGLLFRKPSSFRLEGFANAYW

Query:  ASDPVDRKSTSDFCVYPGGNLIAWASKKQHIISLSCSEA
        AS P DR+STS +C+Y GGNL++W++ KQ ++S S +E+
Subjt:  ASDPVDRKSTSDFCVYPGGNLIAWASKKQHIISLSCSEA

SwissProt top hitse value%identityAlignment
P0CV72 Secreted RxLR effector protein 1611.3e-1841.07Show/hide
Query:  YRSIAGALQY-ATLTRPEIEYSVNKLCQFMHAPTQSHWQAVKRILRYLIGTLGHGLLFRKPSSFRLEGFANAYWASDPVDRKSTSDFCVYPGGNLIAWAS
        Y S  GA+ Y   +TRP++  +V  L QF   P  +HWQA+KR+LRYL  T  +GL F +  + +L G+++A WA D   R+STS +     G  ++W S
Subjt:  YRSIAGALQY-ATLTRPEIEYSVNKLCQFMHAPTQSHWQAVKRILRYLIGTLGHGLLFRKPSSFRLEGFANAYWASDPVDRKSTSDFCVYPGGNLIAWAS

Query:  KKQHIISLSCSE
        KKQ  ++LS +E
Subjt:  KKQHIISLSCSE

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-944.3e-2728.61Show/hide
Query:  LFEVKARLVAKGFHQEADLDYIETFSPVIKPTTIRVIFTMALAYG--------------WTLRKEVFMTQPPGMIDNTKPHMVCKLRKALY---------
        L   KARLV KGF Q+  +D+ E FSPV+K T+IR I ++A +                  L +E++M QP G     K HMVCKL K+LY         
Subjt:  LFEVKARLVAKGFHQEADLDYIETFSPVIKPTTIRVIFTMALAYG--------------WTLRKEVFMTQPPGMIDNTKPHMVCKLRKALY---------

Query:  -------------------------------------------------------------------------------VSYLPAGGLFLSQAKYITDIL
                                                                                       V    +  L+LSQ KYI  +L
Subjt:  -------------------------------------------------------------------------------VSYLPAGGLFLSQAKYITDIL

Query:  HKTKMHEANPIATPL-----ISGSILSVFHGEPFHDVHL-YRSIAGALQYATL-TRPEIEYSVNKLCQFMHAPTQSHWQAVKRILRYLIGTLGHGLLFRK
         +  M  A P++TPL     +S  +      E  +   + Y S  G+L YA + TRP+I ++V  + +F+  P + HW+AVK ILRYL GT G  L F  
Subjt:  HKTKMHEANPIATPL-----ISGSILSVFHGEPFHDVHL-YRSIAGALQYATL-TRPEIEYSVNKLCQFMHAPTQSHWQAVKRILRYLIGTLGHGLLFRK

Query:  PSSFRLEGFANAYWASDPVDRKSTSDFCVYPGGNLIAWASKKQHIISLSCSEA
             L+G+ +A  A D  +RKS++ +     G  I+W SK Q  ++LS +EA
Subjt:  PSSFRLEGFANAYWASDPVDRKSTSDFCVYPGGNLIAWASKKQHIISLSCSEA

P92519 Uncharacterized mitochondrial protein AtMg008103.4e-3242.59Show/hide
Query:  GLFLSQAKYITDILHKTKMHEANPIATPL---ISGSILSVFHGEPFHDVHLYRSIAGALQYATLTRPEIEYSVNKLCQFMHAPTQSHWQAVKRILRYLIG
        GLFLSQ KY   IL+   M +  P++TPL   ++ S+ +  + +P      +RSI GALQY TLTRP+I Y+VN +CQ MH PT + +  +KR+LRY+ G
Subjt:  GLFLSQAKYITDILHKTKMHEANPIATPL---ISGSILSVFHGEPFHDVHLYRSIAGALQYATLTRPEIEYSVNKLCQFMHAPTQSHWQAVKRILRYLIG

Query:  TLGHGLLFRKPSSFRLEGFANAYWASDPVDRKSTSDFCVYPGGNLIAWASKKQHIISLSCSE
        T+ HGL   K S   ++ F ++ WA     R+ST+ FC + G N+I+W++K+Q  +S S +E
Subjt:  TLGHGLLFRKPSSFRLEGFANAYWASDPVDRKSTSDFCVYPGGNLIAWASKKQHIISLSCSE

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE11.3e-5229.78Show/hide
Query:  PNITASDHDPYSKSLNTSDTVLLPTSSSVVNKHPMVTRAKTGIF----KLKILLTDYAEIEPPTVKEALKSPHWVVAIKAEYEALMNNDMWALVNPPIDK
        P+I      P ++ +N +       + + +N H M TRAK GI     K  + ++  AE EP T  +ALK   W  A+ +E  A + N  W LV PP   
Subjt:  PNITASDHDPYSKSLNTSDTVLLPTSSSVVNKHPMVTRAKTGIF----KLKILLTDYAEIEPPTVKEALKSPHWVVAIKAEYEALMNNDMWALVNPPIDK

Query:  KGNGVQMSELKSYASQVVDGTLDMNEDEIFVQVFGPEKHGRVRGYGVGVTPSELFGSSSNVRDLEHRLNESEQHLQESEQQRKVEVNVPSKKVFSTGSIS
                                                                  S+V  +  R                    + +KK  S GS++
Subjt:  KGNGVQMSELKSYASQVVDGTLDMNEDEIFVQVFGPEKHGRVRGYGVGVTPSELFGSSSNVRDLEHRLNESEQHLQESEQQRKVEVNVPSKKVFSTGSIS

Query:  TLFEVKARLVAKGFHQEADLDYIETFSPVIKPTTIRVIFTMALAYGW--------------TLRKEVFMTQPPGMIDNTKPHMVCKLRKALY--------
             KARLVAKG++Q   LDY ETFSPVIK T+IR++  +A+   W              TL  +V+M+QPPG ID  +P+ VCKLRKALY        
Subjt:  TLFEVKARLVAKGFHQEADLDYIETFSPVIKPTTIRVIFTMALAYGW--------------TLRKEVFMTQPPGMIDNTKPHMVCKLRKALY--------

Query:  ----------------------VSYLPAG-------------------------------------------------------GLFLSQAKYITDILHK
                              +  L  G                                                       GL LSQ +YI D+L +
Subjt:  ----------------------VSYLPAG-------------------------------------------------------GLFLSQAKYITDILHK

Query:  TKMHEANPIATPLISGSILSVFHGEPFHDVHLYRSIAGALQYATLTRPEIEYSVNKLCQFMHAPTQSHWQAVKRILRYLIGTLGHGLLFRKPSSFRLEGF
        T M  A P+ TP+     LS++ G    D   YR I G+LQY   TRP+I Y+VN+L QFMH PT+ H QA+KRILRYL GT  HG+  +K ++  L  +
Subjt:  TKMHEANPIATPLISGSILSVFHGEPFHDVHLYRSIAGALQYATLTRPEIEYSVNKLCQFMHAPTQSHWQAVKRILRYLIGTLGHGLLFRKPSSFRLEGF

Query:  ANAYWASDPVDRKSTSDFCVYPGGNLIAWASKKQHIISLSCSEA
        ++A WA D  D  ST+ + VY G + I+W+SKKQ  +  S +EA
Subjt:  ANAYWASDPVDRKSTSDFCVYPGGNLIAWASKKQHIISLSCSEA

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE22.5e-5128.42Show/hide
Query:  LPNITASDHDPYSKSLNTSDTVLLP-----------TSSSVVNKHPMVTRAKTGI----FKLKILLTDYAEIEPPTVKEALKSPHWVVAIKAEYEALMNN
        +P  + S  +P S S +++ T  LP            + + VN H M TRAK GI     K     +  A  EP T  +A+K   W  A+ +E  A + N
Subjt:  LPNITASDHDPYSKSLNTSDTVLLP-----------TSSSVVNKHPMVTRAKTGI----FKLKILLTDYAEIEPPTVKEALKSPHWVVAIKAEYEALMNN

Query:  DMWALVNPPIDKKGNGVQMSELKSYASQVVDGTLDMNEDEIFVQVFGPEKHGRVRGYGVGVTPSELFGSSSNVRDLEHRLNESEQHLQESEQQRKVEVNV
          W LV PP                                 V + G                                                    +
Subjt:  DMWALVNPPIDKKGNGVQMSELKSYASQVVDGTLDMNEDEIFVQVFGPEKHGRVRGYGVGVTPSELFGSSSNVRDLEHRLNESEQHLQESEQQRKVEVNV

Query:  PSKKVFSTGSISTLFEVKARLVAKGFHQEADLDYIETFSPVIKPTTIRVIFTMALAYGW--------------TLRKEVFMTQPPGMIDNTKPHMVCKLR
         +KK  S GS++     KARLVAKG++Q   LDY ETFSPVIK T+IR++  +A+   W              TL  EV+M+QPPG +D  +P  VC+LR
Subjt:  PSKKVFSTGSISTLFEVKARLVAKGFHQEADLDYIETFSPVIKPTTIRVIFTMALAYGW--------------TLRKEVFMTQPPGMIDNTKPHMVCKLR

Query:  KALY------------------------------VSYLPAG-------------------------------------------------------GLFL
        KA+Y                              +  L  G                                                       GL L
Subjt:  KALY------------------------------VSYLPAG-------------------------------------------------------GLFL

Query:  SQAKYITDILHKTKMHEANPIATPLISGSILSVFHGEPFHDVHLYRSIAGALQYATLTRPEIEYSVNKLCQFMHAPTQSHWQAVKRILRYLIGTLGHGLL
        SQ +Y  D+L +T M  A P+ATP+ +   L++  G    D   YR I G+LQY   TRP++ Y+VN+L Q+MH PT  HW A+KR+LRYL GT  HG+ 
Subjt:  SQAKYITDILHKTKMHEANPIATPLISGSILSVFHGEPFHDVHLYRSIAGALQYATLTRPEIEYSVNKLCQFMHAPTQSHWQAVKRILRYLIGTLGHGLL

Query:  FRKPSSFRLEGFANAYWASDPVDRKSTSDFCVYPGGNLIAWASKKQHIISLSCSEA
         +K ++  L  +++A WA D  D  ST+ + VY G + I+W+SKKQ  +  S +EA
Subjt:  FRKPSSFRLEGFANAYWASDPVDRKSTSDFCVYPGGNLIAWASKKQHIISLSCSEA

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 84.7e-3728.49Show/hide
Query:  SISTLFEVKARLVAKGFHQEADLDYIETFSPVIKPTTIRVIFTMALAYGWTLR--------------KEVFMTQPPGMI----DNTKPHMVCKLRKALY-
        S  T+   KARLVAKG+ Q+  +D+IETFSPV K T++++I  ++  Y +TL               +E++M  PPG      D+  P+ VC L+K++Y 
Subjt:  SISTLFEVKARLVAKGFHQEADLDYIETFSPVIKPTTIRVIFTMALAYGWTLR--------------KEVFMTQPPGMI----DNTKPHMVCKLRKALY-

Query:  -----------------------------------------------------------------------------VSYL-------PAGGLFLSQAKY
                                                                                     + Y         A G+ + Q KY
Subjt:  -----------------------------------------------------------------------------VSYL-------PAGGLFLSQAKY

Query:  ITDILHKTKMHEANPIATPLISGSILSVFHGEPFHDVHLYRSIAGALQYATLTRPEIEYSVNKLCQFMHAPTQSHWQAVKRILRYLIGTLGHGLLFRKPS
          D+L +T +    P + P+      S   G  F D   YR + G L Y  +TR +I ++VNKL QF  AP  +H QAV +IL Y+ GT+G GL +   +
Subjt:  ITDILHKTKMHEANPIATPLISGSILSVFHGEPFHDVHLYRSIAGALQYATLTRPEIEYSVNKLCQFMHAPTQSHWQAVKRILRYLIGTLGHGLLFRKPS

Query:  SFRLEGFANAYWASDPVDRKSTSDFCVYPGGNLIAWASKKQHIISLSCSEA
          +L+ F++A + S    R+ST+ +C++ G +LI+W SKKQ ++S S +EA
Subjt:  SFRLEGFANAYWASDPVDRKSTSDFCVYPGGNLIAWASKKQHIISLSCSEA

ATMG00240.1 Gag-Pol-related retrotransposon family protein1.6e-1342.31Show/hide
Query:  YATLTRPEIEYSVNKLCQFMHAPTQSHWQAVKRILRYLIGTLGHGLLFRKPSSFRLEGFANAYWASDPVDRKSTSDFC
        Y T+TRP++ ++VN+L QF  A   +  QAV ++L Y+ GT+G GL +   S  +L+ FA++ WAS P  R+S + FC
Subjt:  YATLTRPEIEYSVNKLCQFMHAPTQSHWQAVKRILRYLIGTLGHGLLFRKPSSFRLEGFANAYWASDPVDRKSTSDFC

ATMG00810.1 DNA/RNA polymerases superfamily protein2.4e-3342.59Show/hide
Query:  GLFLSQAKYITDILHKTKMHEANPIATPL---ISGSILSVFHGEPFHDVHLYRSIAGALQYATLTRPEIEYSVNKLCQFMHAPTQSHWQAVKRILRYLIG
        GLFLSQ KY   IL+   M +  P++TPL   ++ S+ +  + +P      +RSI GALQY TLTRP+I Y+VN +CQ MH PT + +  +KR+LRY+ G
Subjt:  GLFLSQAKYITDILHKTKMHEANPIATPL---ISGSILSVFHGEPFHDVHLYRSIAGALQYATLTRPEIEYSVNKLCQFMHAPTQSHWQAVKRILRYLIG

Query:  TLGHGLLFRKPSSFRLEGFANAYWASDPVDRKSTSDFCVYPGGNLIAWASKKQHIISLSCSE
        T+ HGL   K S   ++ F ++ WA     R+ST+ FC + G N+I+W++K+Q  +S S +E
Subjt:  TLGHGLLFRKPSSFRLEGFANAYWASDPVDRKSTSDFCVYPGGNLIAWASKKQHIISLSCSE

ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase)6.4e-1026.92Show/hide
Query:  MVTRAKTGIFKL----KILLTDYAEIEPPTVKEALKSPHWVVAIKAEYEALMNNDMWALVNPPIDKKGNGVQMSELKSYASQVVDGTLDMNEDEIFVQVF
        M+TR+K GI KL     + +T   + EP +V  ALK P W  A++ E +AL  N  W LV PP+++   G +                          VF
Subjt:  MVTRAKTGIFKL----KILLTDYAEIEPPTVKEALKSPHWVVAIKAEYEALMNNDMWALVNPPIDKKGNGVQMSELKSYASQVVDGTLDMNEDEIFVQVF

Query:  GPEKHGRVRGYGVGVTPSELFGSSSNVRDLEHRLNESEQHLQESEQQRKVEVNVPSKKVFSTGSISTLFEVKARLVAKGFHQEADLDYIETFSPVIKPTT
          + H                                                          S  TL  +KARLVAKGFHQE  + ++ET+SPV++  T
Subjt:  GPEKHGRVRGYGVGVTPSELFGSSSNVRDLEHRLNESEQHLQESEQQRKVEVNVPSKKVFSTGSISTLFEVKARLVAKGFHQEADLDYIETFSPVIKPTT

Query:  IRVIFTMA
        IR I  +A
Subjt:  IRVIFTMA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTCTTCCAATGAAACTTCTCCTTCTGAGACACTAAACTCCTCTCAACCTGTGAAAGCAATAAATCCTGGAAGCAAAACTAATACTGTGAAATTGGATGAAGAGAA
TTTTTTTTACTGGAAAATTCAAGTTCGAGCTGTTCTACGTGGTCATGGGTTAGGGCATTTTATTGATGATGATGCGTTAATTCCTCCGAAGACTATTCGCACTAGTGAGA
ATTCATCTTCTACTGTTCCTAATCCCGAATATGAAGCATGGATTCGACAAGATAATCTCATCACATCGTGGTTTCTTGGCTCGATGTCTAATGAGATTCTTTCGGAAGTT
CTTGATTGTGAAACAGCTGGCGATATCTGGAAAATTTTAAATGATCCGACTGGTAAAAAGATTTCCCAAGACGATCATGTGATGCATATTCTAAACGGTTTGAGGGTTGA
GTACGACTCTACCGTTTCTGTTATTACAGAGAAAGATGAAACCCCTGTTGGATTTTATGCTCTAAAACCCGTAGATAGTAAATTAGATGAGGGTTCCCTTAAGTGGTGTC
TCCGGGTCTTGAACAAAGGGTCCTACCCTCTCACTGGCCCGAGAGAGAATTATGTCTGCAGTGAGAAGAATGCAACTTTCCTTCTACAAAGAAGCAACAACAACCTTCTA
TGGATAATAATAATCCGAAACGAGGAGCTGGAGGAGCCAGAGGACCTAATGGAAACAATAATGGAGGAAGATCAAATCCCAGAAATTAGAACAATAATGGAGGCAAACCA
CAGTGTCAATTATGCGGTCGATTTGGTCATACAGTTCTCAGGTGTTACTTTCGTTTTGAAAGACGGGGCTTCCGATCATGTAACGAGTGACTATTCTAATCTGACCATGG
GCTCTGAATATACTAGAGATAACAAGGTTCATGTAGGCAACGATGCATGTTTGGATGTTCTTCATATTGGTTCCTCTATTGACATTTTCACTAGTCGAACTCTTTTCCAA
GGCAAGTCATTACCGAATATCACTGCCTCAGACCATGATCCTTATTCGAAATCTTTGAATACTTCAGACACTGTGCTTTTGCCTACTTCTTCCTCTGTTGTCAACAAGCA
TCCCATGGTTACTCGAGCGAAGACAGGTATATTCAAATTGAAAATTCTTTTGACAGATTATGCTGAAATAGAACCACCTACAGTTAAAGAGGCTTTGAAAAGTCCTCATT
GGGTTGTTGCTATTAAAGCTGAATATGAGGCCTTGATGAATAATGATATGTGGGCTCTTGTTAATCCTCCTATTGATAAAAAAGGTAATGGAGTGCAAATGTCGGAACTC
AAATCATATGCTTCTCAAGTAGTTGATGGTACACTTGACATGAACGAGGATGAGATTTTTGTGCAAGTTTTTGGACCAGAGAAACATGGACGTGTTCGTGGTTATGGAGT
AGGTGTTACTCCTTCTGAGCTATTTGGGTCATCTTCTAATGTACGTGATCTTGAGCATCGTCTTAACGAGTCTGAACAACATCTTCAAGAATCTGAACAACAAAGAAAAG
TCGAGGTTAATGTACCTTCGAAAAAAGTTTTTTCGACGGGATCTATTTCGACACTTTTTGAAGTGAAAGCTCGCCTAGTTGCCAAAGGATTTCATCAAGAAGCTGATTTA
GACTATATTGAGACGTTTAGTCCAGTTATAAAACCAACCACCATTCGTGTTATTTTTACTATGGCTCTTGCTTATGGTTGGACATTGAGGAAAGAAGTTTTTATGACTCA
GCCTCCAGGAATGATTGATAATACAAAACCACACATGGTATGCAAGCTGAGGAAAGCTCTATATGTATCTTATCTTCCTGCTGGTGGTCTTTTTCTGTCTCAAGCAAAAT
ATATAACTGATATTTTACATAAAACCAAGATGCATGAAGCCAATCCCATTGCTACTCCTTTGATTAGTGGATCTATATTATCTGTATTTCATGGAGAACCCTTTCATGAT
GTTCATCTCTATAGAAGCATAGCTGGGGCACTTCAGTATGCAACTCTTACTAGACCTGAAATAGAATATAGTGTAAATAAATTATGTCAATTCATGCATGCTCCAACTCA
AAGTCATTGGCAAGCAGTTAAAAGAATACTTCGTTATCTTATTGGCACTCTTGGTCATGGATTACTCTTTCGCAAACCAAGTAGTTTTCGTCTTGAAGGGTTTGCTAATG
CTTATTGGGCCTCGGATCCAGTTGATCGAAAGTCTACCTCTGATTTTTGTGTATATCCTGGAGGTAATTTGATTGCATGGGCTTCAAAGAAGCAACATATTATTTCTCTT
TCCTGTTCTGAAGCATAG
mRNA sequenceShow/hide mRNA sequence
ATGGATTCTTCCAATGAAACTTCTCCTTCTGAGACACTAAACTCCTCTCAACCTGTGAAAGCAATAAATCCTGGAAGCAAAACTAATACTGTGAAATTGGATGAAGAGAA
TTTTTTTTACTGGAAAATTCAAGTTCGAGCTGTTCTACGTGGTCATGGGTTAGGGCATTTTATTGATGATGATGCGTTAATTCCTCCGAAGACTATTCGCACTAGTGAGA
ATTCATCTTCTACTGTTCCTAATCCCGAATATGAAGCATGGATTCGACAAGATAATCTCATCACATCGTGGTTTCTTGGCTCGATGTCTAATGAGATTCTTTCGGAAGTT
CTTGATTGTGAAACAGCTGGCGATATCTGGAAAATTTTAAATGATCCGACTGGTAAAAAGATTTCCCAAGACGATCATGTGATGCATATTCTAAACGGTTTGAGGGTTGA
GTACGACTCTACCGTTTCTGTTATTACAGAGAAAGATGAAACCCCTGTTGGATTTTATGCTCTAAAACCCGTAGATAGTAAATTAGATGAGGGTTCCCTTAAGTGGTGTC
TCCGGGTCTTGAACAAAGGGTCCTACCCTCTCACTGGCCCGAGAGAGAATTATGTCTGCAGTGAGAAGAATGCAACTTTCCTTCTACAAAGAAGCAACAACAACCTTCTA
TGGATAATAATAATCCGAAACGAGGAGCTGGAGGAGCCAGAGGACCTAATGGAAACAATAATGGAGGAAGATCAAATCCCAGAAATTAGAACAATAATGGAGGCAAACCA
CAGTGTCAATTATGCGGTCGATTTGGTCATACAGTTCTCAGGTGTTACTTTCGTTTTGAAAGACGGGGCTTCCGATCATGTAACGAGTGACTATTCTAATCTGACCATGG
GCTCTGAATATACTAGAGATAACAAGGTTCATGTAGGCAACGATGCATGTTTGGATGTTCTTCATATTGGTTCCTCTATTGACATTTTCACTAGTCGAACTCTTTTCCAA
GGCAAGTCATTACCGAATATCACTGCCTCAGACCATGATCCTTATTCGAAATCTTTGAATACTTCAGACACTGTGCTTTTGCCTACTTCTTCCTCTGTTGTCAACAAGCA
TCCCATGGTTACTCGAGCGAAGACAGGTATATTCAAATTGAAAATTCTTTTGACAGATTATGCTGAAATAGAACCACCTACAGTTAAAGAGGCTTTGAAAAGTCCTCATT
GGGTTGTTGCTATTAAAGCTGAATATGAGGCCTTGATGAATAATGATATGTGGGCTCTTGTTAATCCTCCTATTGATAAAAAAGGTAATGGAGTGCAAATGTCGGAACTC
AAATCATATGCTTCTCAAGTAGTTGATGGTACACTTGACATGAACGAGGATGAGATTTTTGTGCAAGTTTTTGGACCAGAGAAACATGGACGTGTTCGTGGTTATGGAGT
AGGTGTTACTCCTTCTGAGCTATTTGGGTCATCTTCTAATGTACGTGATCTTGAGCATCGTCTTAACGAGTCTGAACAACATCTTCAAGAATCTGAACAACAAAGAAAAG
TCGAGGTTAATGTACCTTCGAAAAAAGTTTTTTCGACGGGATCTATTTCGACACTTTTTGAAGTGAAAGCTCGCCTAGTTGCCAAAGGATTTCATCAAGAAGCTGATTTA
GACTATATTGAGACGTTTAGTCCAGTTATAAAACCAACCACCATTCGTGTTATTTTTACTATGGCTCTTGCTTATGGTTGGACATTGAGGAAAGAAGTTTTTATGACTCA
GCCTCCAGGAATGATTGATAATACAAAACCACACATGGTATGCAAGCTGAGGAAAGCTCTATATGTATCTTATCTTCCTGCTGGTGGTCTTTTTCTGTCTCAAGCAAAAT
ATATAACTGATATTTTACATAAAACCAAGATGCATGAAGCCAATCCCATTGCTACTCCTTTGATTAGTGGATCTATATTATCTGTATTTCATGGAGAACCCTTTCATGAT
GTTCATCTCTATAGAAGCATAGCTGGGGCACTTCAGTATGCAACTCTTACTAGACCTGAAATAGAATATAGTGTAAATAAATTATGTCAATTCATGCATGCTCCAACTCA
AAGTCATTGGCAAGCAGTTAAAAGAATACTTCGTTATCTTATTGGCACTCTTGGTCATGGATTACTCTTTCGCAAACCAAGTAGTTTTCGTCTTGAAGGGTTTGCTAATG
CTTATTGGGCCTCGGATCCAGTTGATCGAAAGTCTACCTCTGATTTTTGTGTATATCCTGGAGGTAATTTGATTGCATGGGCTTCAAAGAAGCAACATATTATTTCTCTT
TCCTGTTCTGAAGCATAG
Protein sequenceShow/hide protein sequence
MDSSNETSPSETLNSSQPVKAINPGSKTNTVKLDEENFFYWKIQVRAVLRGHGLGHFIDDDALIPPKTIRTSENSSSTVPNPEYEAWIRQDNLITSWFLGSMSNEILSEV
LDCETAGDIWKILNDPTGKKISQDDHVMHILNGLRVEYDSTVSVITEKDETPVGFYALKPVDSKLDEGSLKWCLRVLNKGSYPLTGPRENYVCSEKNATFLLQRSNNNLL
WIIIIRNEELEEPEDLMETIMEEDQIPEIRTIMEANHSVNYAVDLVIQFSGVTFVLKDGASDHVTSDYSNLTMGSEYTRDNKVHVGNDACLDVLHIGSSIDIFTSRTLFQ
GKSLPNITASDHDPYSKSLNTSDTVLLPTSSSVVNKHPMVTRAKTGIFKLKILLTDYAEIEPPTVKEALKSPHWVVAIKAEYEALMNNDMWALVNPPIDKKGNGVQMSEL
KSYASQVVDGTLDMNEDEIFVQVFGPEKHGRVRGYGVGVTPSELFGSSSNVRDLEHRLNESEQHLQESEQQRKVEVNVPSKKVFSTGSISTLFEVKARLVAKGFHQEADL
DYIETFSPVIKPTTIRVIFTMALAYGWTLRKEVFMTQPPGMIDNTKPHMVCKLRKALYVSYLPAGGLFLSQAKYITDILHKTKMHEANPIATPLISGSILSVFHGEPFHD
VHLYRSIAGALQYATLTRPEIEYSVNKLCQFMHAPTQSHWQAVKRILRYLIGTLGHGLLFRKPSSFRLEGFANAYWASDPVDRKSTSDFCVYPGGNLIAWASKKQHIISL
SCSEA