; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0018721 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0018721
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonuclease H
Genome locationchr5:33246159..33247277
RNA-Seq ExpressionLag0018721
SyntenyLag0018721
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022158830.1 uncharacterized protein LOC111025293 [Momordica charantia]5.0e-3438.66Show/hide
Query:  FTDEIMGGEVSHKFKMPQINLLTVKQGPRESLKDYINRFSNEVLQEEGYDDGVALTAVISGLQDERLLNSIGESQPRTYVEFMTRAQRYISAEELLRSKQ
        F  + +GG    +   P   LLT+KQ   ESL+DY+ RF+ E LQ EG  D V+L A +SG++DE L  S G+  P T+ E ++RAQRY+SA E   SK 
Subjt:  FTDEIMGGEVSHKFKMPQINLLTVKQGPRESLKDYINRFSNEVLQEEGYDDGVALTAVISGLQDERLLNSIGESQPRTYVEFMTRAQRYISAEELLRSKQ

Query:  EERESRGVFISNRHREGRGKGRQVEERGRSRHEHSSANGRG-RAEAKELQGRAEPKAKYNRFTPLTASLEQVLAALQDTNMLKHQERLRSDPDRRNRNKY
                      RE  GK      R   + E S    +G R E ++   + +P  K+ ++TP T  +EQVL  ++D  +LK  ER+++   +R++ +Y
Subjt:  EERESRGVFISNRHREGRGKGRQVEERGRSRHEHSSANGRG-RAEAKELQGRAEPKAKYNRFTPLTASLEQVLAALQDTNMLKHQERLRSDPDRRNRNKY

Query:  CMFHGDHNHTTQECIQLRDEIENLIREGYLKEFVGQDR
        C+FH DH H TQ+C  L++E+E LIR GYLKE+V + +
Subjt:  CMFHGDHNHTTQECIQLRDEIENLIREGYLKEFVGQDR

XP_022159368.1 uncharacterized protein LOC111025785 [Momordica charantia]2.3e-3137.55Show/hide
Query:  FTDEIMGGEVSHKFKMPQINLLTVKQGPRESLKDYINRFSNEVLQEEGYDDGVALTAVISGLQDERLLNSIGESQPRTYVEFMTRAQRYISAEELLRSKQ
        F  + +GG    +   P   LLT+KQ   ESL DY+ RF+ E LQ E   D V+L A +SG++DE L  S G+  P T+ E ++RAQRY+SA E   SK+
Subjt:  FTDEIMGGEVSHKFKMPQINLLTVKQGPRESLKDYINRFSNEVLQEEGYDDGVALTAVISGLQDERLLNSIGESQPRTYVEFMTRAQRYISAEELLRSKQ

Query:  EERESRGVFISNRHREGRGKGRQVEERGRSRHEHSSANGRGRAEAKELQGRAEPKAKYNRFTPLTASLEQVLAALQDTNMLKHQERLRSDPDRRNRNKYC
        E    R    +++ RE  G   Q                  R E ++   + +P  K+ ++TP T  LEQVL  ++D  +LK  ER++    +R++ +YC
Subjt:  EERESRGVFISNRHREGRGKGRQVEERGRSRHEHSSANGRGRAEAKELQGRAEPKAKYNRFTPLTASLEQVLAALQDTNMLKHQERLRSDPDRRNRNKYC

Query:  MFHGDHNHTTQECIQLRDEIENLIREGYLKEFVGQDR
        +FH DHNH TQ+   L++E+E LIR GYL+E+V + +
Subjt:  MFHGDHNHTTQECIQLRDEIENLIREGYLKEFVGQDR

XP_030958629.1 uncharacterized protein LOC115980536 [Quercus lobata]2.3e-3136.13Show/hide
Query:  FTDEIMGGEVSHKFKMPQINLLTVKQGPRESLKDYINRFSNEVLQEEGYDDGVALTAVISGLQDERLLNSIGESQPRTYVEFMTRAQRYISAEELLRSKQ
        F +  +GG+   + K    +LLT++QG  ESL+ +I RF+ E L  +  DD + L A  +G+  +  ++ + E +P+T  E +  AQ +++AE+ + +K+
Subjt:  FTDEIMGGEVSHKFKMPQINLLTVKQGPRESLKDYINRFSNEVLQEEGYDDGVALTAVISGLQDERLLNSIGESQPRTYVEFMTRAQRYISAEELLRSKQ

Query:  EERESRGVFISNRHREGRGKGRQVEERGRSRHEHSSANGRGRAEAKELQGR-AEPKAKYNRFTPLTASLEQVLAALQDTNMLKHQERLRSDPDRRNRNKY
         +R  R      RH E   +     ++GR+             + KE  GR   P  +   +TPL A L QVL  ++D   LK  E+++ DP++RN+NKY
Subjt:  EERESRGVFISNRHREGRGKGRQVEERGRSRHEHSSANGRGRAEAKELQGR-AEPKAKYNRFTPLTASLEQVLAALQDTNMLKHQERLRSDPDRRNRNKY

Query:  CMFHGDHNHTTQECIQLRDEIENLIREGYLKEFVGQDR
        C FH DH H T EC  L+ +IENLIR+G LK FVG+DR
Subjt:  CMFHGDHNHTTQECIQLRDEIENLIREGYLKEFVGQDR

XP_030958631.1 uncharacterized protein LOC115980538 [Quercus lobata]2.3e-3136.13Show/hide
Query:  FTDEIMGGEVSHKFKMPQINLLTVKQGPRESLKDYINRFSNEVLQEEGYDDGVALTAVISGLQDERLLNSIGESQPRTYVEFMTRAQRYISAEELLRSKQ
        F +  +GG+   + K    +LLT++QG  ESL+ +I RF+ E L  +  DD + L A  +G+  +  ++ + E +P+T  E +  AQ +++AE+ + +K+
Subjt:  FTDEIMGGEVSHKFKMPQINLLTVKQGPRESLKDYINRFSNEVLQEEGYDDGVALTAVISGLQDERLLNSIGESQPRTYVEFMTRAQRYISAEELLRSKQ

Query:  EERESRGVFISNRHREGRGKGRQVEERGRSRHEHSSANGRGRAEAKELQGR-AEPKAKYNRFTPLTASLEQVLAALQDTNMLKHQERLRSDPDRRNRNKY
         +R  R      RH E   +     ++GR+             + KE  GR   P  +   +TPL A L QVL  ++D   LK  E+++ DP++RN+NKY
Subjt:  EERESRGVFISNRHREGRGKGRQVEERGRSRHEHSSANGRGRAEAKELQGR-AEPKAKYNRFTPLTASLEQVLAALQDTNMLKHQERLRSDPDRRNRNKY

Query:  CMFHGDHNHTTQECIQLRDEIENLIREGYLKEFVGQDR
        C FH DH H T EC  L+ +IENLIR+G LK FVG+DR
Subjt:  CMFHGDHNHTTQECIQLRDEIENLIREGYLKEFVGQDR

XP_030968695.1 uncharacterized protein LOC115989173 [Quercus lobata]1.2e-3035.56Show/hide
Query:  FTDEIMGGEVSHKFKMPQINLLTVKQGPRESLKDYINRFSNEVLQEEGYDDGVALTAVISGLQDERLLNSIGESQPRTYVEFMTRAQRYISAEELLRSKQ
        F +  +GG+   + K    +LLT++QG  ESL+ +I RF+ E L  +  DD + L A  +G+  +  ++ + E +P+T  E +  AQ +++AE+ + +K+
Subjt:  FTDEIMGGEVSHKFKMPQINLLTVKQGPRESLKDYINRFSNEVLQEEGYDDGVALTAVISGLQDERLLNSIGESQPRTYVEFMTRAQRYISAEELLRSKQ

Query:  EERESRGVFISNRHREGRGKGRQVEERGRSRHEHSSANGRGRAE-AKELQGR-AEPKAKYNRFTPLTASLEQVLAALQDTNMLKHQERLRSDPDRRNRNK
         +R  R                 +E       E +    +GR E  KE  GR   P  +   +TPL A L QVL  ++D   LK  E+++ DP++RN+NK
Subjt:  EERESRGVFISNRHREGRGKGRQVEERGRSRHEHSSANGRGRAE-AKELQGR-AEPKAKYNRFTPLTASLEQVLAALQDTNMLKHQERLRSDPDRRNRNK

Query:  YCMFHGDHNHTTQECIQLRDEIENLIREGYLKEFVGQDR
        YC FH DH H   EC  L+ +IENLIR+G LK FVG+DR
Subjt:  YCMFHGDHNHTTQECIQLRDEIENLIREGYLKEFVGQDR

TrEMBL top hitse value%identityAlignment
A0A6J1CNT2 uncharacterized protein LOC1110128057.3e-3135.56Show/hide
Query:  KEEDGHHSSQRRTQNE----DIEGLIGQMGPPFTDEIMGGEVSHKFKMPQINLLTVKQGPRESLKDYINRFSNEVLQEEGYDDGVALTAVISGLQDERLL
        K  D   SS++R   +    D+E L+ Q   PFT+EIM                  ++   ESL DY+ RF+ E LQ EG  D V+L A I G++DE L 
Subjt:  KEEDGHHSSQRRTQNE----DIEGLIGQMGPPFTDEIMGGEVSHKFKMPQINLLTVKQGPRESLKDYINRFSNEVLQEEGYDDGVALTAVISGLQDERLL

Query:  NSIGESQPRTYVEFMTRAQRYISAEELLRSKQEERESRGVFISNRHREGRGKGRQVEERGRSRHEHSSANGRG-RAEAKELQGRAEPKAKYNRFTPLTAS
         S G+  P T+ E ++RAQRY+SA E   SK   RES G                  +R   + E S    +G R E ++   + +P  K+ ++T  T  
Subjt:  NSIGESQPRTYVEFMTRAQRYISAEELLRSKQEERESRGVFISNRHREGRGKGRQVEERGRSRHEHSSANGRG-RAEAKELQGRAEPKAKYNRFTPLTAS

Query:  LEQVLAALQDTNMLKHQERLRSDPDRRNRNKYCMFHGDHNHTTQECIQLRDEIENLIREGYLKEFVGQDR
        LEQVL  +++  +LK  ER+ +   +R++ +YC+FH DH H TQ+C  L++E+E LI  GYLKE+V + +
Subjt:  LEQVLAALQDTNMLKHQERLRSDPDRRNRNKYCMFHGDHNHTTQECIQLRDEIENLIREGYLKEFVGQDR

A0A6J1DWY0 uncharacterized protein LOC1110252932.4e-3438.66Show/hide
Query:  FTDEIMGGEVSHKFKMPQINLLTVKQGPRESLKDYINRFSNEVLQEEGYDDGVALTAVISGLQDERLLNSIGESQPRTYVEFMTRAQRYISAEELLRSKQ
        F  + +GG    +   P   LLT+KQ   ESL+DY+ RF+ E LQ EG  D V+L A +SG++DE L  S G+  P T+ E ++RAQRY+SA E   SK 
Subjt:  FTDEIMGGEVSHKFKMPQINLLTVKQGPRESLKDYINRFSNEVLQEEGYDDGVALTAVISGLQDERLLNSIGESQPRTYVEFMTRAQRYISAEELLRSKQ

Query:  EERESRGVFISNRHREGRGKGRQVEERGRSRHEHSSANGRG-RAEAKELQGRAEPKAKYNRFTPLTASLEQVLAALQDTNMLKHQERLRSDPDRRNRNKY
                      RE  GK      R   + E S    +G R E ++   + +P  K+ ++TP T  +EQVL  ++D  +LK  ER+++   +R++ +Y
Subjt:  EERESRGVFISNRHREGRGKGRQVEERGRSRHEHSSANGRG-RAEAKELQGRAEPKAKYNRFTPLTASLEQVLAALQDTNMLKHQERLRSDPDRRNRNKY

Query:  CMFHGDHNHTTQECIQLRDEIENLIREGYLKEFVGQDR
        C+FH DH H TQ+C  L++E+E LIR GYLKE+V + +
Subjt:  CMFHGDHNHTTQECIQLRDEIENLIREGYLKEFVGQDR

A0A6J1DYL6 uncharacterized protein LOC1110257851.1e-3137.55Show/hide
Query:  FTDEIMGGEVSHKFKMPQINLLTVKQGPRESLKDYINRFSNEVLQEEGYDDGVALTAVISGLQDERLLNSIGESQPRTYVEFMTRAQRYISAEELLRSKQ
        F  + +GG    +   P   LLT+KQ   ESL DY+ RF+ E LQ E   D V+L A +SG++DE L  S G+  P T+ E ++RAQRY+SA E   SK+
Subjt:  FTDEIMGGEVSHKFKMPQINLLTVKQGPRESLKDYINRFSNEVLQEEGYDDGVALTAVISGLQDERLLNSIGESQPRTYVEFMTRAQRYISAEELLRSKQ

Query:  EERESRGVFISNRHREGRGKGRQVEERGRSRHEHSSANGRGRAEAKELQGRAEPKAKYNRFTPLTASLEQVLAALQDTNMLKHQERLRSDPDRRNRNKYC
        E    R    +++ RE  G   Q                  R E ++   + +P  K+ ++TP T  LEQVL  ++D  +LK  ER++    +R++ +YC
Subjt:  EERESRGVFISNRHREGRGKGRQVEERGRSRHEHSSANGRGRAEAKELQGRAEPKAKYNRFTPLTASLEQVLAALQDTNMLKHQERLRSDPDRRNRNKYC

Query:  MFHGDHNHTTQECIQLRDEIENLIREGYLKEFVGQDR
        +FH DHNH TQ+   L++E+E LIR GYL+E+V + +
Subjt:  MFHGDHNHTTQECIQLRDEIENLIREGYLKEFVGQDR

A0A7N2N013 Ribonuclease H8.1e-3034.15Show/hide
Query:  QMGPPFTDEIMGGEVSHKFKMPQINLLTVKQGPRESLKDYINRFSNEVLQEEGYDDGVALTAVISGLQDERLLNSIGESQPRTYVEFMTRAQRYISAEEL
        ++   FT   +GG   H++K     L+ +KQ   E+L+ YI+RF+ E L  +  DD + + A  +GL+  + L S+ ++ P+T  E + RA +Y++AE+ 
Subjt:  QMGPPFTDEIMGGEVSHKFKMPQINLLTVKQGPRESLKDYINRFSNEVLQEEGYDDGVALTAVISGLQDERLLNSIGESQPRTYVEFMTRAQRYISAEEL

Query:  LRSKQEERESRGVFISNRHREGRGKGRQVEERGRSRHEHSSANGRGRAEAKELQGRAEPKAKYNRFTPLTASLEQVLAALQDTNMLKHQERLRSDPDRRN
        L S+++  + R     +R  +GR KGR  + R   R              K + GR      +  FTPL A ++QVL  ++D   L    +L+SDP +R+
Subjt:  LRSKQEERESRGVFISNRHREGRGKGRQVEERGRSRHEHSSANGRGRAEAKELQGRAEPKAKYNRFTPLTASLEQVLAALQDTNMLKHQERLRSDPDRRN

Query:  RNKYCMFHGDHNHTTQECIQLRDEIENLIREGYLKEFVGQDRGKRP
        R+KYC FH DH H T +C  L+ +IE LIR+G L++FV + R  +P
Subjt:  RNKYCMFHGDHNHTTQECIQLRDEIENLIREGYLKEFVGQDRGKRP

A0A7N2N9G0 Reverse transcriptase6.2e-3034Show/hide
Query:  GLIGQMGPPFTDEIMGGEVSHKFKMPQINLLTVKQGPRESLKDYINRFSNEVLQEEGYDDGVALTAVISGLQDERLLNSIGESQPRTYVEFMTRAQRYIS
        G   ++   FT   +GG   H++K     L+++KQ   E+L+ YI+RF+ E L  +  DD + + A  +GL+  + L S+ ++ P+T  E + RA +Y++
Subjt:  GLIGQMGPPFTDEIMGGEVSHKFKMPQINLLTVKQGPRESLKDYINRFSNEVLQEEGYDDGVALTAVISGLQDERLLNSIGESQPRTYVEFMTRAQRYIS

Query:  AEELLRSKQEERESRGVFISNRHREGRGKGRQVEERGRSRHEHSSANGRGRAEAKELQGRAEPKAKYNRFTPLTASLEQVLAALQDTNMLKHQERLRSDP
        AE+ L +++E+   R     NR  +GR K R  + R   R              + + GR      +  FTPLTA ++QVL  ++D   L    +L+SDP
Subjt:  AEELLRSKQEERESRGVFISNRHREGRGKGRQVEERGRSRHEHSSANGRGRAEAKELQGRAEPKAKYNRFTPLTASLEQVLAALQDTNMLKHQERLRSDP

Query:  DRRNRNKYCMFHGDHNHTTQECIQLRDEIENLIREGYLKEFVGQDRGKRP
        ++R+R+KYC FH DH H T +C  L+ +IE LIR+G L+ FV ++R   P
Subjt:  DRRNRNKYCMFHGDHNHTTQECIQLRDEIENLIREGYLKEFVGQDRGKRP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTACACAGGGAATAATGACAGGAAAAAGGGGCGAGAGCGCGAGCTATCCAAATGGCTAAAAGAAGAAGATGGTCATCACAGCTCCCAAAGGAGGACTCAGAATGAGGA
CATAGAAGGGCTAATCGGACAGATGGGACCACCTTTCACTGATGAGATAATGGGAGGAGAGGTGTCGCATAAATTCAAGATGCCTCAGATCAATCTACTGACAGTAAAAC
AGGGGCCCCGGGAAAGCCTGAAGGATTATATTAACAGATTTAGTAACGAAGTTTTGCAGGAAGAAGGCTATGACGATGGAGTTGCTTTGACCGCTGTGATTTCAGGTCTA
CAGGATGAAAGACTGCTCAACTCGATCGGTGAGAGCCAGCCACGAACATACGTAGAGTTCATGACCCGAGCACAAAGGTACATAAGCGCCGAGGAACTGCTGAGATCCAA
ACAGGAAGAGAGAGAGAGTCGGGGAGTGTTTATATCTAACCGGCATCGAGAAGGCAGAGGAAAGGGGCGCCAGGTCGAGGAAAGAGGCCGAAGCCGACATGAGCACTCCT
CGGCCAATGGCCGAGGCCGAGCAGAGGCCAAGGAGCTGCAGGGTCGAGCAGAGCCAAAAGCCAAGTATAACAGGTTTACGCCGCTAACAGCTTCACTTGAACAGGTCTTG
GCCGCATTACAAGATACCAATATGTTGAAACATCAAGAAAGGTTGAGGTCAGACCCAGATAGGAGAAACAGGAACAAATACTGCATGTTCCATGGAGACCACAACCACAC
AACCCAGGAATGCATACAACTAAGGGATGAAATAGAAAACCTAATTCGAGAGGGCTACCTCAAGGAATTCGTAGGACAGGATAGAGGAAAGAGACCTTTGCCAACAGAAT
AG
mRNA sequenceShow/hide mRNA sequence
ATGTACACAGGGAATAATGACAGGAAAAAGGGGCGAGAGCGCGAGCTATCCAAATGGCTAAAAGAAGAAGATGGTCATCACAGCTCCCAAAGGAGGACTCAGAATGAGGA
CATAGAAGGGCTAATCGGACAGATGGGACCACCTTTCACTGATGAGATAATGGGAGGAGAGGTGTCGCATAAATTCAAGATGCCTCAGATCAATCTACTGACAGTAAAAC
AGGGGCCCCGGGAAAGCCTGAAGGATTATATTAACAGATTTAGTAACGAAGTTTTGCAGGAAGAAGGCTATGACGATGGAGTTGCTTTGACCGCTGTGATTTCAGGTCTA
CAGGATGAAAGACTGCTCAACTCGATCGGTGAGAGCCAGCCACGAACATACGTAGAGTTCATGACCCGAGCACAAAGGTACATAAGCGCCGAGGAACTGCTGAGATCCAA
ACAGGAAGAGAGAGAGAGTCGGGGAGTGTTTATATCTAACCGGCATCGAGAAGGCAGAGGAAAGGGGCGCCAGGTCGAGGAAAGAGGCCGAAGCCGACATGAGCACTCCT
CGGCCAATGGCCGAGGCCGAGCAGAGGCCAAGGAGCTGCAGGGTCGAGCAGAGCCAAAAGCCAAGTATAACAGGTTTACGCCGCTAACAGCTTCACTTGAACAGGTCTTG
GCCGCATTACAAGATACCAATATGTTGAAACATCAAGAAAGGTTGAGGTCAGACCCAGATAGGAGAAACAGGAACAAATACTGCATGTTCCATGGAGACCACAACCACAC
AACCCAGGAATGCATACAACTAAGGGATGAAATAGAAAACCTAATTCGAGAGGGCTACCTCAAGGAATTCGTAGGACAGGATAGAGGAAAGAGACCTTTGCCAACAGAAT
AG
Protein sequenceShow/hide protein sequence
MYTGNNDRKKGRERELSKWLKEEDGHHSSQRRTQNEDIEGLIGQMGPPFTDEIMGGEVSHKFKMPQINLLTVKQGPRESLKDYINRFSNEVLQEEGYDDGVALTAVISGL
QDERLLNSIGESQPRTYVEFMTRAQRYISAEELLRSKQEERESRGVFISNRHREGRGKGRQVEERGRSRHEHSSANGRGRAEAKELQGRAEPKAKYNRFTPLTASLEQVL
AALQDTNMLKHQERLRSDPDRRNRNKYCMFHGDHNHTTQECIQLRDEIENLIREGYLKEFVGQDRGKRPLPTE