; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0018722 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0018722
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRNase H domain-containing protein
Genome locationchr5:33255273..33259204
RNA-Seq ExpressionLag0018722
SyntenyLag0018722
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAA7029126.1 unnamed protein product [Microthlaspi erraticum]6.0e-0432.67Show/hide
Query:  WVSREE--SQSSTWKRHRQRVSRIMFCGPPPPSNYLKLNVDASWNEELKQGGVGWIFRDSRGSPVDVGFAKIRRNWT-IEADATNVVKVLKYDGEIVSDL
        W +R E  SQS T K +    +       PPP+ +LK NVD +W+      GVGW+ RD +G  + +G  +I +  T +EA+    ++ L++  E V+ L
Subjt:  WVSREE--SQSSTWKRHRQRVSRIMFCGPPPPSNYLKLNVDASWNEELKQGGVGWIFRDSRGSPVDVGFAKIRRNWT-IEADATNVVKVLKYDGEIVSDL

Query:  K
        +
Subjt:  K

XP_022143317.1 uncharacterized protein LOC111013216 [Momordica charantia]4.9e-0636.19Show/hide
Query:  VLNSNSSQEELRCIWVSREESQSSTW-KRHRQRVSRIMFCGPPPPSNYLKLNVDASWNEELKQGGVGWIFRDSRGSPVDVGFAKIRRNWTIEA-DATNVV
        VL  NS+ ++  CI  +R   Q+  +  R R+ ++ +      PP+N  KLN DASW+EE + GG+GWI  D RG  V  G  KIR    I A +   ++
Subjt:  VLNSNSSQEELRCIWVSREESQSSTW-KRHRQRVSRIMFCGPPPPSNYLKLNVDASWNEELKQGGVGWIFRDSRGSPVDVGFAKIRRNWTIEA-DATNVV

Query:  KVLKY
        + L++
Subjt:  KVLKY

TrEMBL top hitse value%identityAlignment
A0A1J3C7A8 Putative ribonuclease H protein (Fragment)5.8e-0535.29Show/hide
Query:  VLNSNSSQEELRCIWVSREESQSSTWKRHRQRVSRIMFCGPPPPSNYLKLNVDASWNEELKQGGVGWIFRDSRGSPVDVGFAKIR
        VL +    EE    WV   E +S   K   +     +    PPP  +LK NVD +W+EE  + G+GW+ RDSRG  + +G  K +
Subjt:  VLNSNSSQEELRCIWVSREESQSSTWKRHRQRVSRIMFCGPPPPSNYLKLNVDASWNEELKQGGVGWIFRDSRGSPVDVGFAKIR

A0A1J3D6G7 Uncharacterized protein4.5e-0535.21Show/hide
Query:  WVSREESQSSTWKRHRQRVSRIMFCGPPPPSNYLKLNVDASWNEELKQGGVGWIFRDSRGSPVDVGFAKIR
        W+ R E  S   + H  +         PPP  +LK NVD +W++E  Q G+GW+ RD+RG  + +G  K++
Subjt:  WVSREESQSSTWKRHRQRVSRIMFCGPPPPSNYLKLNVDASWNEELKQGGVGWIFRDSRGSPVDVGFAKIR

A0A1J3ELU2 RNase H domain-containing protein8.2e-0731.11Show/hide
Query:  WVSREESQSSTWKRHRQRVSRIMFCGPPPPSNYLKLNVDASWNEELKQGGVGWIFRDSRGSPVDVGFAKIRR------------NWTI------------
        W SR+E+Q S   ++    + +     PPPS ++K NVD +WN++    G+GW+ RDS+G  + +G  KI R             W I            
Subjt:  WVSREESQSSTWKRHRQRVSRIMFCGPPPPSNYLKLNVDASWNEELKQGGVGWIFRDSRGSPVDVGFAKIRR------------NWTI------------

Query:  -EADATNVVKVLKYDGEIVSDLKVILSDIEDLAAK
         E D+   V+ L  D E    L+ I  DI  L AK
Subjt:  -EADATNVVKVLKYDGEIVSDLKVILSDIEDLAAK

A0A6D2IMK4 RNase H domain-containing protein2.9e-0432.67Show/hide
Query:  WVSREE--SQSSTWKRHRQRVSRIMFCGPPPPSNYLKLNVDASWNEELKQGGVGWIFRDSRGSPVDVGFAKIRRNWT-IEADATNVVKVLKYDGEIVSDL
        W +R E  SQS T K +    +       PPP+ +LK NVD +W+      GVGW+ RD +G  + +G  +I +  T +EA+    ++ L++  E V+ L
Subjt:  WVSREE--SQSSTWKRHRQRVSRIMFCGPPPPSNYLKLNVDASWNEELKQGGVGWIFRDSRGSPVDVGFAKIRRNWT-IEADATNVVKVLKYDGEIVSDL

Query:  K
        +
Subjt:  K

A0A6J1CQG0 uncharacterized protein LOC1110132162.4e-0636.19Show/hide
Query:  VLNSNSSQEELRCIWVSREESQSSTW-KRHRQRVSRIMFCGPPPPSNYLKLNVDASWNEELKQGGVGWIFRDSRGSPVDVGFAKIRRNWTIEA-DATNVV
        VL  NS+ ++  CI  +R   Q+  +  R R+ ++ +      PP+N  KLN DASW+EE + GG+GWI  D RG  V  G  KIR    I A +   ++
Subjt:  VLNSNSSQEELRCIWVSREESQSSTW-KRHRQRVSRIMFCGPPPPSNYLKLNVDASWNEELKQGGVGWIFRDSRGSPVDVGFAKIRRNWTIEA-DATNVV

Query:  KVLKY
        + L++
Subjt:  KVLKY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G29090.1 Ribonuclease H-like superfamily protein8.9e-0626.28Show/hide
Query:  WVSREESQSSTWKRHRQRVSRIMFCG--PPPPSNYLKLNVDASWNEELKQGGVGWIFRDSRGSPVDVG------------------------FAKIRRNW
        W  R E++S   K    R S    CG   PPP  ++K N DA+WN + ++ G+GW+ R+ +G    +G                         ++ + N+
Subjt:  WVSREESQSSTWKRHRQRVSRIMFCG--PPPPSNYLKLNVDASWNEELKQGGVGWIFRDSRGSPVDVG------------------------FAKIRRNW

Query:  TI-EADATNVVKVLKYDGEIVSDLKVILSDIEDLAAK
         I E+D+  ++++L  D EI   LK  + D++ L ++
Subjt:  TI-EADATNVVKVLKYDGEIVSDLKVILSDIEDLAAK

AT5G65005.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein7.5e-0537.93Show/hide
Query:  PPPSNYLKLNVDASWNEELKQGGVGWIFRDSRGSPVDVGFAKIR-RNWTIEADATNVV
        PP  + LK N DAS +E     G+GWI R+S+G+ ++ G  K + R  T EA+ + ++
Subjt:  PPPSNYLKLNVDASWNEELKQGGVGWIFRDSRGSPVDVGFAKIR-RNWTIEADATNVV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGTGTTAAATTCCAACAGCTCTCAAGAAGAATTAAGATGCATTTGGGTGAGCAGAGAAGAATCTCAAAGTAGTACCTGGAAGCGGCATCGTCAGAGAGTCTCGAG
AATCATGTTTTGTGGACCCCCTCCCCCGTCGAACTACCTAAAGTTGAATGTTGATGCTTCATGGAATGAAGAGCTGAAGCAGGGAGGTGTGGGTTGGATCTTTCGTGATT
CTCGTGGGTCTCCAGTGGATGTTGGATTTGCCAAAATCAGAAGAAATTGGACAATTGAAGCTGATGCTACGAATGTGGTGAAGGTGCTGAAATACGACGGTGAAATTGTT
TCGGATTTGAAGGTGATTTTGAGTGACATCGAAGATTTAGCTGCTAAGGCTAGTGTGACTCCCCTTAGGGTTTTCATTGTTGTCGAGCTCCAGGTGGTCACCGGGCCTTT
GGTCCTGGTGAAACCGGGGCAGTCAGGGACATCAGAGACCGAAGGGAGGTGGCCAAGCTCGACCCGCGCCAGCAGGCCAAAGGGTCGGCCTCGGCCTTATGCCGAGGTCG
ACCATTATGCTCGGCCTCGGCCTAGGCCGAGGCCGACCATATTGGCTCGACCCTTTGGTCTGGTCTTCCTCTGGGTCGGCTTTCTGGTCCCACCTCTGTCCAATTGTCCT
CGTCAGCTCCTTGTGGATGGTCGGCCTCGGCCTTGGCATGAGGCCGATCCATGTTTTTACATTGTCTGCTCGTTCTCTTCATGGTTGGACTCATGTGTAGATTCGCTCCA
TGGTCGAACATCTCCTGCTGCTTTGAATGCTTTGGTTGTGCTAAACAGTGAAGTGACTGAGAAATCGAACCAGTCACGTTGCTTTGAATGCGTGCCTGAGGGGTGCGTAC
ACTCAGTCAGGGAAAACTTGGGGAGGCCGAGGATATTCCCGAGCCTCTCTTCAAGTGTTGTGTTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAACTTGGGGAGGCT
AAGGAAATACCCGAGCCTCTCTTCAAGTATTGTATTCATCCCGAGAGTGCATACACTCAGTCGGGGAAAACTTGGGGAGGTCGAGGAAATTTCCGAGCCTCTCTTCAAGT
GTTGTGTTCATCCCAGGGGGGTGCGTACACTCTTCTGGGGAAAACTTGGGGAGGCCGAGGAAATTCCCGAGCCTCTCTTCAAGTGATGTGTTCATCCCAGAGGTGCGTAC
ACTCTTATGGGGAAAACTTGGGGAGGCCGAGGAAATTCTCGAGCCTCTCTTCAAGTGATGTGTTCATCCCAAGGGTGCGTACACTCTTCTTGGGAAAACTTGAGGAGGCT
AAGGAAATACCCGAGCCTCTCTTCAAGTATTGTATTCATCCCGAGGGTGCGTACATTCAGTCAGGAAAAACTTGGGGAGGCCGAGGAAATTCCCAAGCCTCTCTTCAAGT
ACTGTGTTCATCCCAGGGCGTGGAGCTCGGCCTTGGCCTCTGGATGGTCGGCCTCGGCCTTGGCATGAGGCCGACCAGCTCTTCTGCGTTGTTTGCTTTCTTGTTTTCCA
TCCCAAGGGTGCCTGCAGTAAGTTGGGGACTTGGGGAGGTTGAGGGCATGCGTCAACCTCTCTTCAAGTGTTGTGTTCATCCTAGGTGTGCGTACACTCTTCTGGGGAAA
CTTGGGGAGACCTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAAGTGTTAAATTCCAACAGCTCTCAAGAAGAATTAAGATGCATTTGGGTGAGCAGAGAAGAATCTCAAAGTAGTACCTGGAAGCGGCATCGTCAGAGAGTCTCGAG
AATCATGTTTTGTGGACCCCCTCCCCCGTCGAACTACCTAAAGTTGAATGTTGATGCTTCATGGAATGAAGAGCTGAAGCAGGGAGGTGTGGGTTGGATCTTTCGTGATT
CTCGTGGGTCTCCAGTGGATGTTGGATTTGCCAAAATCAGAAGAAATTGGACAATTGAAGCTGATGCTACGAATGTGGTGAAGGTGCTGAAATACGACGGTGAAATTGTT
TCGGATTTGAAGGTGATTTTGAGTGACATCGAAGATTTAGCTGCTAAGGCTAGTGTGACTCCCCTTAGGGTTTTCATTGTTGTCGAGCTCCAGGTGGTCACCGGGCCTTT
GGTCCTGGTGAAACCGGGGCAGTCAGGGACATCAGAGACCGAAGGGAGGTGGCCAAGCTCGACCCGCGCCAGCAGGCCAAAGGGTCGGCCTCGGCCTTATGCCGAGGTCG
ACCATTATGCTCGGCCTCGGCCTAGGCCGAGGCCGACCATATTGGCTCGACCCTTTGGTCTGGTCTTCCTCTGGGTCGGCTTTCTGGTCCCACCTCTGTCCAATTGTCCT
CGTCAGCTCCTTGTGGATGGTCGGCCTCGGCCTTGGCATGAGGCCGATCCATGTTTTTACATTGTCTGCTCGTTCTCTTCATGGTTGGACTCATGTGTAGATTCGCTCCA
TGGTCGAACATCTCCTGCTGCTTTGAATGCTTTGGTTGTGCTAAACAGTGAAGTGACTGAGAAATCGAACCAGTCACGTTGCTTTGAATGCGTGCCTGAGGGGTGCGTAC
ACTCAGTCAGGGAAAACTTGGGGAGGCCGAGGATATTCCCGAGCCTCTCTTCAAGTGTTGTGTTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAACTTGGGGAGGCT
AAGGAAATACCCGAGCCTCTCTTCAAGTATTGTATTCATCCCGAGAGTGCATACACTCAGTCGGGGAAAACTTGGGGAGGTCGAGGAAATTTCCGAGCCTCTCTTCAAGT
GTTGTGTTCATCCCAGGGGGGTGCGTACACTCTTCTGGGGAAAACTTGGGGAGGCCGAGGAAATTCCCGAGCCTCTCTTCAAGTGATGTGTTCATCCCAGAGGTGCGTAC
ACTCTTATGGGGAAAACTTGGGGAGGCCGAGGAAATTCTCGAGCCTCTCTTCAAGTGATGTGTTCATCCCAAGGGTGCGTACACTCTTCTTGGGAAAACTTGAGGAGGCT
AAGGAAATACCCGAGCCTCTCTTCAAGTATTGTATTCATCCCGAGGGTGCGTACATTCAGTCAGGAAAAACTTGGGGAGGCCGAGGAAATTCCCAAGCCTCTCTTCAAGT
ACTGTGTTCATCCCAGGGCGTGGAGCTCGGCCTTGGCCTCTGGATGGTCGGCCTCGGCCTTGGCATGAGGCCGACCAGCTCTTCTGCGTTGTTTGCTTTCTTGTTTTCCA
TCCCAAGGGTGCCTGCAGTAAGTTGGGGACTTGGGGAGGTTGAGGGCATGCGTCAACCTCTCTTCAAGTGTTGTGTTCATCCTAGGTGTGCGTACACTCTTCTGGGGAAA
CTTGGGGAGACCTAG
Protein sequenceShow/hide protein sequence
MKVLNSNSSQEELRCIWVSREESQSSTWKRHRQRVSRIMFCGPPPPSNYLKLNVDASWNEELKQGGVGWIFRDSRGSPVDVGFAKIRRNWTIEADATNVVKVLKYDGEIV
SDLKVILSDIEDLAAKASVTPLRVFIVVELQVVTGPLVLVKPGQSGTSETEGRWPSSTRASRPKGRPRPYAEVDHYARPRPRPRPTILARPFGLVFLWVGFLVPPLSNCP
RQLLVDGRPRPWHEADPCFYIVCSFSSWLDSCVDSLHGRTSPAALNALVVLNSEVTEKSNQSRCFECVPEGCVHSVRENLGRPRIFPSLSSSVVFIPGVRTLFWGKLGEA
KEIPEPLFKYCIHPESAYTQSGKTWGGRGNFRASLQVLCSSQGGAYTLLGKTWGGRGNSRASLQVMCSSQRCVHSYGENLGRPRKFSSLSSSDVFIPRVRTLFLGKLEEA
KEIPEPLFKYCIHPEGAYIQSGKTWGGRGNSQASLQVLCSSQGVELGLGLWMVGLGLGMRPTSSSALFAFLFSIPRVPAVSWGLGEVEGMRQPLFKCCVHPRCAYTLLGK
LGET