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Lag0018725 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0018725
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionGag/pol protein
Genome locationchr5:33359443..33365857
RNA-Seq ExpressionLag0018725
SyntenyLag0018725
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025945.1 gag/pol protein [Cucumis melo var. makuwa]7.2e-2884.42Show/hide
Query:  MNLPITLYCDNNGVVANSKEPSSHKRGKHIKRKYHLIQEIVQRGDVIVTKITSEHNKANPFTKALLTKVFEEHLESL
        MNLPITLYCDN+G VANSKEP SHKRGKHI+RKYHLI+EIVQRGDVIVTKI SEHN A+PFTK L  KVFE HLESL
Subjt:  MNLPITLYCDNNGVVANSKEPSSHKRGKHIKRKYHLIQEIVQRGDVIVTKITSEHNKANPFTKALLTKVFEEHLESL
KAA0035907.1 gag/pol protein [Cucumis melo var. makuwa]7.2e-2884.42Show/hide
Query:  MNLPITLYCDNNGVVANSKEPSSHKRGKHIKRKYHLIQEIVQRGDVIVTKITSEHNKANPFTKALLTKVFEEHLESL
        MNLPITLYCDN+G VANSKEP SHKRGKHI+RKYHLI+EIVQRGDVIVTKI SEHN A+PFTK L  KVFE HLESL
Subjt:  MNLPITLYCDNNGVVANSKEPSSHKRGKHIKRKYHLIQEIVQRGDVIVTKITSEHNKANPFTKALLTKVFEEHLESL
KAA0042496.1 gag/pol protein [Cucumis melo var. makuwa]7.2e-2884.42Show/hide
Query:  MNLPITLYCDNNGVVANSKEPSSHKRGKHIKRKYHLIQEIVQRGDVIVTKITSEHNKANPFTKALLTKVFEEHLESL
        MNLPITLYCDN+G VANSKEP SHKRGKHI+RKYHLI+EIVQRGDVIVTKI SEHN A+PFTK L  KVFE HLESL
Subjt:  MNLPITLYCDNNGVVANSKEPSSHKRGKHIKRKYHLIQEIVQRGDVIVTKITSEHNKANPFTKALLTKVFEEHLESL
KAA0059226.1 gag/pol protein [Cucumis melo var. makuwa]7.2e-2884.42Show/hide
Query:  MNLPITLYCDNNGVVANSKEPSSHKRGKHIKRKYHLIQEIVQRGDVIVTKITSEHNKANPFTKALLTKVFEEHLESL
        MNLPITLYCDN+G VANSKEP SHKRGKHI+RKYHLI+EIVQRGDVIVTKI SEHN A+PFTK L  KVFE HLESL
Subjt:  MNLPITLYCDNNGVVANSKEPSSHKRGKHIKRKYHLIQEIVQRGDVIVTKITSEHNKANPFTKALLTKVFEEHLESL
KAA0064189.1 gag/pol protein [Cucumis melo var. makuwa]9.4e-2884.42Show/hide
Query:  MNLPITLYCDNNGVVANSKEPSSHKRGKHIKRKYHLIQEIVQRGDVIVTKITSEHNKANPFTKALLTKVFEEHLESL
        MNLPITLYCDN+G VANSKEP SHKRGKHI+RKYHLI+EIVQRGDVIVTKI SEHN A+PFTK L  KVFE HLESL
Subjt:  MNLPITLYCDNNGVVANSKEPSSHKRGKHIKRKYHLIQEIVQRGDVIVTKITSEHNKANPFTKALLTKVFEEHLESL
TrEMBL top hitse value%identityAlignment
A0A5A7T2V9 Gag/pol protein3.5e-2884.42Show/hide
Query:  MNLPITLYCDNNGVVANSKEPSSHKRGKHIKRKYHLIQEIVQRGDVIVTKITSEHNKANPFTKALLTKVFEEHLESL
        MNLPITLYCDN+G VANSKEP SHKRGKHI+RKYHLI+EIVQRGDVIVTKI SEHN A+PFTK L  KVFE HLESL
Subjt:  MNLPITLYCDNNGVVANSKEPSSHKRGKHIKRKYHLIQEIVQRGDVIVTKITSEHNKANPFTKALLTKVFEEHLESL
A0A5A7TKM4 Gag/pol protein3.5e-2884.42Show/hide
Query:  MNLPITLYCDNNGVVANSKEPSSHKRGKHIKRKYHLIQEIVQRGDVIVTKITSEHNKANPFTKALLTKVFEEHLESL
        MNLPITLYCDN+G VANSKEP SHKRGKHI+RKYHLI+EIVQRGDVIVTKI SEHN A+PFTK L  KVFE HLESL
Subjt:  MNLPITLYCDNNGVVANSKEPSSHKRGKHIKRKYHLIQEIVQRGDVIVTKITSEHNKANPFTKALLTKVFEEHLESL
A0A5A7TZD0 Gag/pol protein3.5e-2884.42Show/hide
Query:  MNLPITLYCDNNGVVANSKEPSSHKRGKHIKRKYHLIQEIVQRGDVIVTKITSEHNKANPFTKALLTKVFEEHLESL
        MNLPITLYCDN+G VANSKEP SHKRGKHI+RKYHLI+EIVQRGDVIVTKI SEHN A+PFTK L  KVFE HLESL
Subjt:  MNLPITLYCDNNGVVANSKEPSSHKRGKHIKRKYHLIQEIVQRGDVIVTKITSEHNKANPFTKALLTKVFEEHLESL
A0A5A7UYE8 Gag/pol protein3.5e-2884.42Show/hide
Query:  MNLPITLYCDNNGVVANSKEPSSHKRGKHIKRKYHLIQEIVQRGDVIVTKITSEHNKANPFTKALLTKVFEEHLESL
        MNLPITLYCDN+G VANSKEP SHKRGKHI+RKYHLI+EIVQRGDVIVTKI SEHN A+PFTK L  KVFE HLESL
Subjt:  MNLPITLYCDNNGVVANSKEPSSHKRGKHIKRKYHLIQEIVQRGDVIVTKITSEHNKANPFTKALLTKVFEEHLESL
A0A5D3BUN8 Gag/pol protein4.5e-2884.42Show/hide
Query:  MNLPITLYCDNNGVVANSKEPSSHKRGKHIKRKYHLIQEIVQRGDVIVTKITSEHNKANPFTKALLTKVFEEHLESL
        MNLPITLYCDN+G VANSKEP SHKRGKHI+RKYHLI+EIVQRGDVIVTKI SEHN A+PFTK L  KVFE HLESL
Subjt:  MNLPITLYCDNNGVVANSKEPSSHKRGKHIKRKYHLIQEIVQRGDVIVTKITSEHNKANPFTKALLTKVFEEHLESL
SwissProt top hitse value%identityAlignment
P04146 Copia protein4.3e-0740.54Show/hide
Query:  PITLYCDNNGVVANSKEPSSHKRGKHIKRKYHLIQEIVQRGDVIVTKITSEHNKANPFTKALLTKVFEEHLESL
        PI +Y DN G ++ +  PS HKR KHI  KYH  +E VQ   + +  I +E+  A+ FTK L    F E  + L
Subjt:  PITLYCDNNGVVANSKEPSSHKRGKHIKRKYHLIQEIVQRGDVIVTKITSEHNKANPFTKALLTKVFEEHLESL
P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-942.0e-0436.92Show/hide
Query:  LYCDNNGVVANSKEPSSHKRGKHIKRKYHLIQEIVQRGDVIVTKITSEHNKANPFTKALLTKVFE
        +YCD+   +  SK    H R KHI  +YH I+E+V    + V KI++  N A+  TK +    FE
Subjt:  LYCDNNGVVANSKEPSSHKRGKHIKRKYHLIQEIVQRGDVIVTKITSEHNKANPFTKALLTKVFE
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATTTGCCCATTACATTATACTGTGATAACAATGGGGTTGTAGCCAATTCTAAAGAACCTAGCAGCCACAAACGAGGAAAGCACATCAAGAGGAAGTATCACCTGAT
ACAGGAGATTGTGCAACGAGGAGATGTGATCGTTACCAAGATCACTTCAGAGCACAACAAAGCTAATCCATTTACGAAGGCTCTCTTGACTAAAGTGTTCGAGGAACATC
TAGAGAGTCTAGAAAGATCCAGAAATGGGGTAGCGTCGCGACGCTGTCTATGTAGCGTCGCGACGACTTGGAACCCAAGAAAAGATGACAAGAAGGTGAAGATTGTTGCT
GCTATTTTGGACGAAAACAAGAGCGCTACTGCTGATGATATTAAGAATATTATTGGCTCAGGTGGCATGAGACTTGCTAAAGAACCTGATGAATTTGTGAAGTTGTTACA
GGTTTCATTGGCTTTACAAGACTGTGTTGTTGGGTTATTGTTCACTTTGCTTCCAGTAGTGGGGTGGGAATTTTGGGGTCAGGCAGAGAAAGAATTTAGAGTTGAAGTGG
AGGCTATTGGCCATGTTCAGGCAAAGACAAATTTCCACTACATGAGGTTTGAAATTCATCTGGTTAAGCGAGAACTATTGCAGACGATGAAATGGATATTCTCGAAGAGG
AGCTCGAAGAGGAACTTGAGAAAGAGCGTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAATTTGCCCATTACATTATACTGTGATAACAATGGGGTTGTAGCCAATTCTAAAGAACCTAGCAGCCACAAACGAGGAAAGCACATCAAGAGGAAGTATCACCTGAT
ACAGGAGATTGTGCAACGAGGAGATGTGATCGTTACCAAGATCACTTCAGAGCACAACAAAGCTAATCCATTTACGAAGGCTCTCTTGACTAAAGTGTTCGAGGAACATC
TAGAGAGTCTAGAAAGATCCAGAAATGGGGTAGCGTCGCGACGCTGTCTATGTAGCGTCGCGACGACTTGGAACCCAAGAAAAGATGACAAGAAGGTGAAGATTGTTGCT
GCTATTTTGGACGAAAACAAGAGCGCTACTGCTGATGATATTAAGAATATTATTGGCTCAGGTGGCATGAGACTTGCTAAAGAACCTGATGAATTTGTGAAGTTGTTACA
GGTTTCATTGGCTTTACAAGACTGTGTTGTTGGGTTATTGTTCACTTTGCTTCCAGTAGTGGGGTGGGAATTTTGGGGTCAGGCAGAGAAAGAATTTAGAGTTGAAGTGG
AGGCTATTGGCCATGTTCAGGCAAAGACAAATTTCCACTACATGAGGTTTGAAATTCATCTGGTTAAGCGAGAACTATTGCAGACGATGAAATGGATATTCTCGAAGAGG
AGCTCGAAGAGGAACTTGAGAAAGAGCGTTTAA
Protein sequenceShow/hide protein sequence
MNLPITLYCDNNGVVANSKEPSSHKRGKHIKRKYHLIQEIVQRGDVIVTKITSEHNKANPFTKALLTKVFEEHLESLERSRNGVASRRCLCSVATTWNPRKDDKKVKIVA
AILDENKSATADDIKNIIGSGGMRLAKEPDEFVKLLQVSLALQDCVVGLLFTLLPVVGWEFWGQAEKEFRVEVEAIGHVQAKTNFHYMRFEIHLVKRELLQTMKWIFSKR
SSKRNLRKSV