; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0018745 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0018745
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionChlorophyll a-b binding protein, chloroplastic
Genome locationchr5:33724674..33725645
RNA-Seq ExpressionLag0018745
SyntenyLag0018745
Gene Ontology termsGO:0009635 - response to herbicide (biological process)
GO:0009644 - response to high light intensity (biological process)
GO:0009737 - response to abscisic acid (biological process)
GO:0009768 - photosynthesis, light harvesting in photosystem I (biological process)
GO:0009769 - photosynthesis, light harvesting in photosystem II (biological process)
GO:0010119 - regulation of stomatal movement (biological process)
GO:0018298 - protein-chromophore linkage (biological process)
GO:0009517 - PSII associated light-harvesting complex II (cellular component)
GO:0009522 - photosystem I (cellular component)
GO:0009523 - photosystem II (cellular component)
GO:0016168 - chlorophyll binding (molecular function)
GO:0019904 - protein domain specific binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001344 - Chlorophyll A-B binding protein, plant and chromista
IPR022796 - Chlorophyll A-B binding protein
IPR023329 - Chlorophyll a/b binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600741.1 Chlorophyll a-b binding protein 3, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]4.4e-14695.47Show/hide
Query:  MSMAATSTTLLRPTPFLGQTKGASSQNPLRDVVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHG
        MSMAATST +LRPTPFLGQ + ASS N LRDVVAMGT KYTMGN+LWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHG
Subjt:  MSMAATSTTLLRPTPFLGQTKGASSQNPLRDVVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHG

Query:  RWAMLGALGCITPEVLAKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLA
        RWAMLGA GCITPEVL KWL+VDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLA
Subjt:  RWAMLGALGCITPEVLAKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLA

Query:  DDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS
        DDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS
Subjt:  DDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS

XP_008452292.1 PREDICTED: chlorophyll a-b binding protein 13, chloroplastic [Cucumis melo]1.5e-14695.47Show/hide
Query:  MSMAATSTTLLRPTPFLGQTKGASSQNPLRDVVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHG
        M+  ATS TLLR TPFLGQT+G S QNPLRD VAMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHG
Subjt:  MSMAATSTTLLRPTPFLGQTKGASSQNPLRDVVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHG

Query:  RWAMLGALGCITPEVLAKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLA
        RWAMLGALGCITPEVL KWL+VDFKEPVWFKAGAQIF+EGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLA
Subjt:  RWAMLGALGCITPEVLAKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLA

Query:  DDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS
        DDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS
Subjt:  DDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS

XP_022142746.1 chlorophyll a-b binding protein 13, chloroplastic [Momordica charantia]1.2e-14695.47Show/hide
Query:  MSMAATSTTLLRPTPFLGQTKGASSQNPLRDVVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHG
        M+  ATST LLRPTPFLGQ +G S QNPLRDVVAMGT KYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHG
Subjt:  MSMAATSTTLLRPTPFLGQTKGASSQNPLRDVVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHG

Query:  RWAMLGALGCITPEVLAKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLA
        RWAMLGALGCITPEVL KWLRV+FKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLA
Subjt:  RWAMLGALGCITPEVLAKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLA

Query:  DDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS
        DDP TFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS
Subjt:  DDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS

XP_022943011.1 chlorophyll a-b binding protein 3, chloroplastic-like [Cucurbita moschata]1.7e-14595.09Show/hide
Query:  MSMAATSTTLLRPTPFLGQTKGASSQNPLRDVVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHG
        MSMAATST +LRPTPFLGQ + A S N LRDVVAMGT KYTMGN+LWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHG
Subjt:  MSMAATSTTLLRPTPFLGQTKGASSQNPLRDVVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHG

Query:  RWAMLGALGCITPEVLAKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLA
        RWAMLGA GCITPEVL KWL+VDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLA
Subjt:  RWAMLGALGCITPEVLAKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLA

Query:  DDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS
        DDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS
Subjt:  DDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS

XP_022993918.1 chlorophyll a-b binding protein 3, chloroplastic [Cucurbita maxima]3.4e-14695.47Show/hide
Query:  MSMAATSTTLLRPTPFLGQTKGASSQNPLRDVVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHG
        MSMAATST +LRPTPFLGQ++ ASS N LRDVVAMGT KYTMGN+LWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHG
Subjt:  MSMAATSTTLLRPTPFLGQTKGASSQNPLRDVVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHG

Query:  RWAMLGALGCITPEVLAKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLA
        RWAMLGA GCITPEVL KWL+VDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLA
Subjt:  RWAMLGALGCITPEVLAKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLA

Query:  DDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS
        DDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS
Subjt:  DDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS

TrEMBL top hitse value%identityAlignment
A0A1S3BUM8 Chlorophyll a-b binding protein, chloroplastic7.3e-14795.47Show/hide
Query:  MSMAATSTTLLRPTPFLGQTKGASSQNPLRDVVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHG
        M+  ATS TLLR TPFLGQT+G S QNPLRD VAMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHG
Subjt:  MSMAATSTTLLRPTPFLGQTKGASSQNPLRDVVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHG

Query:  RWAMLGALGCITPEVLAKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLA
        RWAMLGALGCITPEVL KWL+VDFKEPVWFKAGAQIF+EGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLA
Subjt:  RWAMLGALGCITPEVLAKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLA

Query:  DDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS
        DDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS
Subjt:  DDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS

A0A5A7TY25 Chlorophyll a-b binding protein, chloroplastic7.3e-14795.47Show/hide
Query:  MSMAATSTTLLRPTPFLGQTKGASSQNPLRDVVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHG
        M+  ATS TLLR TPFLGQT+G S QNPLRD VAMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHG
Subjt:  MSMAATSTTLLRPTPFLGQTKGASSQNPLRDVVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHG

Query:  RWAMLGALGCITPEVLAKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLA
        RWAMLGALGCITPEVL KWL+VDFKEPVWFKAGAQIF+EGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLA
Subjt:  RWAMLGALGCITPEVLAKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLA

Query:  DDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS
        DDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS
Subjt:  DDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS

A0A6J1CN44 Chlorophyll a-b binding protein, chloroplastic5.6e-14795.47Show/hide
Query:  MSMAATSTTLLRPTPFLGQTKGASSQNPLRDVVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHG
        M+  ATST LLRPTPFLGQ +G S QNPLRDVVAMGT KYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHG
Subjt:  MSMAATSTTLLRPTPFLGQTKGASSQNPLRDVVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHG

Query:  RWAMLGALGCITPEVLAKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLA
        RWAMLGALGCITPEVL KWLRV+FKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLA
Subjt:  RWAMLGALGCITPEVLAKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLA

Query:  DDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS
        DDP TFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS
Subjt:  DDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS

A0A6J1FQJ2 Chlorophyll a-b binding protein, chloroplastic8.1e-14695.09Show/hide
Query:  MSMAATSTTLLRPTPFLGQTKGASSQNPLRDVVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHG
        MSMAATST +LRPTPFLGQ + A S N LRDVVAMGT KYTMGN+LWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHG
Subjt:  MSMAATSTTLLRPTPFLGQTKGASSQNPLRDVVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHG

Query:  RWAMLGALGCITPEVLAKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLA
        RWAMLGA GCITPEVL KWL+VDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLA
Subjt:  RWAMLGALGCITPEVLAKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLA

Query:  DDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS
        DDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS
Subjt:  DDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS

A0A6J1K3P2 Chlorophyll a-b binding protein, chloroplastic1.6e-14695.47Show/hide
Query:  MSMAATSTTLLRPTPFLGQTKGASSQNPLRDVVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHG
        MSMAATST +LRPTPFLGQ++ ASS N LRDVVAMGT KYTMGN+LWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHG
Subjt:  MSMAATSTTLLRPTPFLGQTKGASSQNPLRDVVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHG

Query:  RWAMLGALGCITPEVLAKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLA
        RWAMLGA GCITPEVL KWL+VDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLA
Subjt:  RWAMLGALGCITPEVLAKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLA

Query:  DDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS
        DDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS
Subjt:  DDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS

SwissProt top hitse value%identityAlignment
P14278 Chlorophyll a-b binding protein 4, chloroplastic2.0e-10169.55Show/hide
Query:  STTLLRPTPFLGQTKGASSQNPLRDVVAMGTGKYTM-------GNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIH
        +T  ++ + F+GQ  G S    +R V   G G+ TM          +WYG DR KYLGPFS QTPSYL GEFPGDYGWDTAGLSADPE FA+NR LEVIH
Subjt:  STTLLRPTPFLGQTKGASSQNPLRDVVAMGTGKYTM-------GNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIH

Query:  GRWAMLGALGCITPEVLAKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGND-LYPGGQYFDPLG
         RWAMLGALGC+ PE+L+K   V F E VWFKAG+QIFSEGGLDYLGNPNLVHAQSILA+   QVVLMG VEG+R+ G   +GEG D +YPGG  FDPLG
Subjt:  GRWAMLGALGCITPEVLAKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGND-LYPGGQYFDPLG

Query:  LADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPG
        LADDP  FAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+++PVANNAW YAT F PG
Subjt:  LADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPG

P27489 Chlorophyll a-b binding protein 13, chloroplastic8.9e-14289.81Show/hide
Query:  MSMAATSTTLLRPTPFLGQTKGASSQNPLRDVVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHG
        M+  A+STT+++ TPFLGQTK A   NPLRDVVAMG+ ++TM NDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHG
Subjt:  MSMAATSTTLLRPTPFLGQTKGASSQNPLRDVVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHG

Query:  RWAMLGALGCITPEVLAKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLA
        RWAMLGALGCI PEVL KW++VDFKEPVWFKAG+QIFS+GGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGL GVGEGNDLYPGGQYFDPLGLA
Subjt:  RWAMLGALGCITPEVLAKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLA

Query:  DDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS
        DDP TFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKF PG+
Subjt:  DDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS

P27518 Chlorophyll a-b binding protein 151, chloroplastic1.7e-10069.17Show/hide
Query:  STTLLRPTPFLGQTKGASSQNPLRDVVAMGTGKYTM-------GNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIH
        +T+ ++ + F GQT    S   +  + A+G G+ +M          +WYGPDR KYLGPFS Q PSYL GEFPGDYGWDTAGLSADPE FAKNR LEVIH
Subjt:  STTLLRPTPFLGQTKGASSQNPLRDVVAMGTGKYTM-------GNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIH

Query:  GRWAMLGALGCITPEVLAKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGND-LYPGGQYFDPLG
         RWAMLGALGC+ PE+L+K   V F E VWFKAG+QIFSEGGLDYLGNPNL+HAQSILA+   QVVLMG VEG+R+ G   +GEG D +YPGG  FDPLG
Subjt:  GRWAMLGALGCITPEVLAKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGND-LYPGGQYFDPLG

Query:  LADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPG
        LADDP  FAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP+ENL DHL +PVANNAW YAT F PG
Subjt:  LADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPG

P27523 Chlorophyll a-b binding protein of LHCII type III, chloroplastic1.5e-13687.07Show/hide
Query:  MAATSTTLLRPTPFLGQTKGASSQNPLRDVVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRW
        MAA S  ++  TPFL     A+S +PLRD+ A   G+ TMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFA+NRALEVIHGRW
Subjt:  MAATSTTLLRPTPFLGQTKGASSQNPLRDVVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRW

Query:  AMLGALGCITPEVLAKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLADD
        AMLGALGC+ PEVL KW+ V+FKEPVWFKAG+QIFSEGGLDYLGNPNLVHAQSILAVLGFQV+LMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLADD
Subjt:  AMLGALGCITPEVLAKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLADD

Query:  PVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS
        PVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENL DHLD+PVANNAWV+ATKFAPGS
Subjt:  PVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS

Q9S7M0 Chlorophyll a-b binding protein 3, chloroplastic6.8e-14290.53Show/hide
Query:  SMAATSTTLLRPTPFLGQTKGASSQNPLRDVVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR
        S   +S+++L PT FLGQTK ASS NPLRDVV++G+ KYTMGNDLWYGPDRVKYLGPFS QTPSYL GEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR
Subjt:  SMAATSTTLLRPTPFLGQTKGASSQNPLRDVVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR

Query:  WAMLGALGCITPEVLAKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD
        WAMLGA GCITPEVL KW+RVDFKEPVWFKAG+QIFSEGGLDYLGNPNLVHAQSILAVLGFQV+LMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD
Subjt:  WAMLGALGCITPEVLAKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD

Query:  DPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS
        DPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAW +ATKFAPG+
Subjt:  DPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS

Arabidopsis top hitse value%identityAlignment
AT1G29910.1 chlorophyll A/B binding protein 36.9e-9766.05Show/hide
Query:  ATSTTLLRPTPFLGQTKGASSQNPLRDVVAMGTGKYTMGNDL----------WYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRA
        A ST  L    F G+   A + +P    V +G+G+ TM   +          WYG DRVKYLGPFS ++PSYL GEFPGDYGWDTAGLSADPE FA+NR 
Subjt:  ATSTTLLRPTPFLGQTKGASSQNPLRDVVAMGTGKYTMGNDL----------WYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRA

Query:  LEVIHGRWAMLGALGCITPEVLAKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGND-LYPGGQY
        LEVIH RWAMLGALGC+ PE+LA+   V F E VWFKAG+QIFS+GGLDYLGNP+LVHAQSILA+   QV+LMG VEG+R+ G   +GE  D LYPGG  
Subjt:  LEVIHGRWAMLGALGCITPEVLAKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGND-LYPGGQY

Query:  FDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPG
        FDPLGLA DP  FAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DHL +PV NNAW +AT F PG
Subjt:  FDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPG

AT2G05070.1 photosystem II light harvesting complex gene 2.21.0e-10068.05Show/hide
Query:  STTLLRPTPFLGQTKGASSQNPLRDVVAMGTGKYTM-------GNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIH
        +T+ ++ + F GQT    S + ++ V  +G G+ TM          +WYGPDR KYLGPFS  TPSYL GE+PGDYGWDTAGLSADPE FAKNR LEVIH
Subjt:  STTLLRPTPFLGQTKGASSQNPLRDVVAMGTGKYTM-------GNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIH

Query:  GRWAMLGALGCITPEVLAKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGND-LYPGGQYFDPLG
         RWAMLGALGC  PE+L+K   V F E VWFKAG+QIFSEGGLDYLGNPNL+HAQSILA+   QVVLMG +EG+RI G   +GEG D LYPGG  FDPL 
Subjt:  GRWAMLGALGCITPEVLAKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGND-LYPGGQYFDPLG

Query:  LADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPG
        LA+DP  F+ELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DHL +PVANNAW YAT F PG
Subjt:  LADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPG

AT2G05100.1 photosystem II light harvesting complex gene 2.14.6e-10168.54Show/hide
Query:  STTLLRPTPFLGQTKGASSQNPLRDVVAMGTGKYTM-------GNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIH
        +T+ ++ + F GQT    S   LR V   G G+ TM          +WYGPDR KYLGPFS  TPSYL GE+PGDYGWDTAGLSADPE FAKNR LEVIH
Subjt:  STTLLRPTPFLGQTKGASSQNPLRDVVAMGTGKYTM-------GNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIH

Query:  GRWAMLGALGCITPEVLAKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGND-LYPGGQYFDPLG
         RWAMLGALGC  PE+L+K   V F E VWFKAG+QIFSEGGLDYLGNPNL+HAQSILA+   QVVLMG +EG+RI G   +GEG D LYPGG  FDPL 
Subjt:  GRWAMLGALGCITPEVLAKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGND-LYPGGQYFDPLG

Query:  LADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS
        LA+DP  F+ELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DHL +PVANNAW YAT F PG+
Subjt:  LADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS

AT3G27690.1 photosystem II light harvesting complex gene 2.34.3e-9967.79Show/hide
Query:  STTLLRPTPFLGQTKGASSQNPLRDVVAM-GTGKYTM-------GNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVI
        +T+ ++ + F GQT    S + LR + A  G G+  M          +WYGPDR KYLGPFS  TPSYL GE+PGDYGWDTAGLSADPE FAKNR LEVI
Subjt:  STTLLRPTPFLGQTKGASSQNPLRDVVAM-GTGKYTM-------GNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVI

Query:  HGRWAMLGALGCITPEVLAKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGND-LYPGGQYFDPL
        H RWAMLGALGC  PE+L+K   V F E VWFKAG+QIFSEGGLDYLGNPNL+HAQSILA+   QVVLMG +EG+RI G   +GEG D LYPGG  FDPL
Subjt:  HGRWAMLGALGCITPEVLAKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGND-LYPGGQYFDPL

Query:  GLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPG
         LA+DP  F+ELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ +PVANNAW YAT F PG
Subjt:  GLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPG

AT5G54270.1 light-harvesting chlorophyll B-binding protein 34.8e-14390.53Show/hide
Query:  SMAATSTTLLRPTPFLGQTKGASSQNPLRDVVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR
        S   +S+++L PT FLGQTK ASS NPLRDVV++G+ KYTMGNDLWYGPDRVKYLGPFS QTPSYL GEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR
Subjt:  SMAATSTTLLRPTPFLGQTKGASSQNPLRDVVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR

Query:  WAMLGALGCITPEVLAKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD
        WAMLGA GCITPEVL KW+RVDFKEPVWFKAG+QIFSEGGLDYLGNPNLVHAQSILAVLGFQV+LMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD
Subjt:  WAMLGALGCITPEVLAKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD

Query:  DPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS
        DPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAW +ATKFAPG+
Subjt:  DPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAATGGCCGCCACCTCCACCACCCTCCTCCGGCCGACCCCCTTTCTCGGCCAGACCAAAGGCGCCTCTTCCCAGAACCCCCTCAGAGATGTCGTCGCCATGGGAAC
TGGAAAATACACCATGGGAAATGATCTGTGGTATGGACCAGACCGAGTGAAGTACTTGGGCCCCTTTTCAGCTCAGACTCCCTCCTACTTGAACGGCGAGTTCCCCGGCG
ATTATGGATGGGACACTGCCGGCTTGTCCGCCGATCCCGAGGCCTTCGCCAAGAACAGAGCCCTTGAGGTGATCCACGGGAGGTGGGCCATGTTGGGAGCCTTGGGGTGC
ATAACACCAGAGGTGCTGGCGAAATGGTTGAGAGTGGACTTCAAGGAGCCGGTCTGGTTCAAGGCCGGCGCCCAAATCTTCTCAGAAGGAGGGCTCGACTACCTGGGGAA
CCCGAACCTGGTCCACGCCCAGAGCATCCTGGCCGTGTTGGGCTTCCAAGTGGTCCTTATGGGCTTGGTCGAAGGCTTCCGCATCAACGGCCTGGACGGCGTCGGCGAGG
GCAACGACCTGTACCCGGGCGGCCAGTACTTCGACCCACTCGGACTGGCCGACGACCCAGTCACCTTCGCCGAGCTCAAGGTCAAGGAGATCAAGAACGGCCGCCTCGCC
ATGTTCTCCATGTTCGGGTTCTTCGTTCAGGCCATCGTCACCGGGAAAGGCCCGCTCGAGAACCTTCTCGACCATCTCGACAACCCTGTCGCCAACAATGCTTGGGTTTA
TGCCACCAAGTTTGCTCCCGGCTCATAG
mRNA sequenceShow/hide mRNA sequence
ATGTCAATGGCCGCCACCTCCACCACCCTCCTCCGGCCGACCCCCTTTCTCGGCCAGACCAAAGGCGCCTCTTCCCAGAACCCCCTCAGAGATGTCGTCGCCATGGGAAC
TGGAAAATACACCATGGGAAATGATCTGTGGTATGGACCAGACCGAGTGAAGTACTTGGGCCCCTTTTCAGCTCAGACTCCCTCCTACTTGAACGGCGAGTTCCCCGGCG
ATTATGGATGGGACACTGCCGGCTTGTCCGCCGATCCCGAGGCCTTCGCCAAGAACAGAGCCCTTGAGGTGATCCACGGGAGGTGGGCCATGTTGGGAGCCTTGGGGTGC
ATAACACCAGAGGTGCTGGCGAAATGGTTGAGAGTGGACTTCAAGGAGCCGGTCTGGTTCAAGGCCGGCGCCCAAATCTTCTCAGAAGGAGGGCTCGACTACCTGGGGAA
CCCGAACCTGGTCCACGCCCAGAGCATCCTGGCCGTGTTGGGCTTCCAAGTGGTCCTTATGGGCTTGGTCGAAGGCTTCCGCATCAACGGCCTGGACGGCGTCGGCGAGG
GCAACGACCTGTACCCGGGCGGCCAGTACTTCGACCCACTCGGACTGGCCGACGACCCAGTCACCTTCGCCGAGCTCAAGGTCAAGGAGATCAAGAACGGCCGCCTCGCC
ATGTTCTCCATGTTCGGGTTCTTCGTTCAGGCCATCGTCACCGGGAAAGGCCCGCTCGAGAACCTTCTCGACCATCTCGACAACCCTGTCGCCAACAATGCTTGGGTTTA
TGCCACCAAGTTTGCTCCCGGCTCATAG
Protein sequenceShow/hide protein sequence
MSMAATSTTLLRPTPFLGQTKGASSQNPLRDVVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGC
ITPEVLAKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLA
MFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS