; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0018751 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0018751
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionpentatricopeptide repeat-containing protein At5g15010, mitochondrial-like
Genome locationchr5:33827539..33828180
RNA-Seq ExpressionLag0018751
SyntenyLag0018751
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6582700.1 Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]1.2e-6968.42Show/hide
Query:  MWDGKMRSKLCTLSLLGCTYFSWPSVKSTKHVEFRALTSATMASGFSLWPTRIHTVGPAIAKNSNVWALLSSDFFSCSYISSSSNCNILNTPPKESSQHV
        MW+G+MRSK C LSLL  TYFS  SVKST+HV  R LT     SGFS WPTRIHTV P  A NSNV  L SS F S  Y S  SNC+ILN P +ESSQH 
Subjt:  MWDGKMRSKLCTLSLLGCTYFSWPSVKSTKHVEFRALTSATMASGFSLWPTRIHTVGPAIAKNSNVWALLSSDFFSCSYISSSSNCNILNTPPKESSQHV

Query:  ANDDHVSGDDNDAREVYDEEDMHIKELNINDEGVVQDVDAIMDILRGFGDVNRIEVKNELEHCCIKVLGELVVAVLSRIRNYWEATFTFFVWACKQPSYT
        ANDDHVS DD+D RE  +E++M+I+ LNIND+GV++DVDAIMDI RGF + +RI+VKN+LEHCCIKV GELVVAVLSRIRN WEA FTFFVWA KQP YT
Subjt:  ANDDHVSGDDNDAREVYDEEDMHIKELNINDEGVVQDVDAIMDILRGFGDVNRIEVKNELEHCCIKVLGELVVAVLSRIRNYWEATFTFFVWACKQPSYT

Query:  PTVREYHSM
         ++REYHSM
Subjt:  PTVREYHSM

XP_022145432.1 pentatricopeptide repeat-containing protein At5g15010, mitochondrial-like [Momordica charantia]2.2e-7171.77Show/hide
Query:  MWDGKMRSKLCTLSLLGCTYFSWPSVKSTKHVEFRALTSATMASGFSLWPTRIHTVGPAIAKNSNVWALLSSDFFSCSYISSSSNCNILNTPPKESSQHV
        MWDG+MRSKL +LS+LG TYFSW SVKST+ VE  ALTS TMAS FS  PTRI TV  A   N N  AL SS F SCSYIS SS  +ILN P +ESSQHV
Subjt:  MWDGKMRSKLCTLSLLGCTYFSWPSVKSTKHVEFRALTSATMASGFSLWPTRIHTVGPAIAKNSNVWALLSSDFFSCSYISSSSNCNILNTPPKESSQHV

Query:  ANDDHVSGDDNDAREVYDEEDMHIKELNINDEGVVQDVDAIMDILRGFGDVNRIEVKNELEHCCIKVLGELVVAVLSRIRNYWEATFTFFVWACKQPSYT
        ANDD VSGDDND  E Y EED++IK+L+I DEGV++DVDAI+DILRGFGDVNRI+VKN+LEHC IKV  ELVVAVLSR+RN WEA FTFFVWA KQP Y 
Subjt:  ANDDHVSGDDNDAREVYDEEDMHIKELNINDEGVVQDVDAIMDILRGFGDVNRIEVKNELEHCCIKVLGELVVAVLSRIRNYWEATFTFFVWACKQPSYT

Query:  PTVREYHSM
         +VREYHSM
Subjt:  PTVREYHSM

XP_022979235.1 pentatricopeptide repeat-containing protein At5g15010, mitochondrial isoform X1 [Cucurbita maxima]6.1e-7469.86Show/hide
Query:  MWDGKMRSKLCTLSLLGCTYFSWPSVKSTKHVEFRALTSATMASGFSLWPTRIHTVGPAIAKNSNVWALLSSDFFSCSYISSSSNCNILNTPPKESSQHV
        MW+G+MRSK C LSLL  T+FS  SVKST+HV  RALTSAT+ASGFS WPTRIHTV P  A NSNV  L SS F S  Y S  SNC+ILN P +E+SQH 
Subjt:  MWDGKMRSKLCTLSLLGCTYFSWPSVKSTKHVEFRALTSATMASGFSLWPTRIHTVGPAIAKNSNVWALLSSDFFSCSYISSSSNCNILNTPPKESSQHV

Query:  ANDDHVSGDDNDAREVYDEEDMHIKELNINDEGVVQDVDAIMDILRGFGDVNRIEVKNELEHCCIKVLGELVVAVLSRIRNYWEATFTFFVWACKQPSYT
        ANDDHVS DD+D RE ++E++M+I++LNIND+GV++DVDAIMDI RGF +V+RI+VKN+LEHCCIKV GELVV VLSRIRN WEA FTFFVWA KQP YT
Subjt:  ANDDHVSGDDNDAREVYDEEDMHIKELNINDEGVVQDVDAIMDILRGFGDVNRIEVKNELEHCCIKVLGELVVAVLSRIRNYWEATFTFFVWACKQPSYT

Query:  PTVREYHSM
         ++REYHSM
Subjt:  PTVREYHSM

XP_023527396.1 pentatricopeptide repeat-containing protein At5g15010, mitochondrial isoform X1 [Cucurbita pepo subsp. pepo]3.7e-7168.9Show/hide
Query:  MWDGKMRSKLCTLSLLGCTYFSWPSVKSTKHVEFRALTSATMASGFSLWPTRIHTVGPAIAKNSNVWALLSSDFFSCSYISSSSNCNILNTPPKESSQHV
        MW+G+MRSK C LSLL  TYFS  SVKST+HV  RALT     SGFS WPTR+HTV P  A NSNV  L SS F S  Y S  SNC+ILN P +ESSQH 
Subjt:  MWDGKMRSKLCTLSLLGCTYFSWPSVKSTKHVEFRALTSATMASGFSLWPTRIHTVGPAIAKNSNVWALLSSDFFSCSYISSSSNCNILNTPPKESSQHV

Query:  ANDDHVSGDDNDAREVYDEEDMHIKELNINDEGVVQDVDAIMDILRGFGDVNRIEVKNELEHCCIKVLGELVVAVLSRIRNYWEATFTFFVWACKQPSYT
        ANDDHVS DD+D RE ++E++M+I++LNIND+GV++DVDAIMDI RGF +V+RI+VKN+LEHCCIKV GELVVAVLSRIRN WEA FTFFVWA KQP YT
Subjt:  ANDDHVSGDDNDAREVYDEEDMHIKELNINDEGVVQDVDAIMDILRGFGDVNRIEVKNELEHCCIKVLGELVVAVLSRIRNYWEATFTFFVWACKQPSYT

Query:  PTVREYHSM
         ++REYHSM
Subjt:  PTVREYHSM

XP_038895025.1 pentatricopeptide repeat-containing protein At5g15010, mitochondrial-like [Benincasa hispida]4.4e-7270.33Show/hide
Query:  MWDGKMRSKLCTLSLLGCTYFSWPSVKSTKHVEFRALTSATMASGFSLWPTRIHTVGPAIAKNSNVWALLSSDFFSCSYISSSSNCNILNTPPKESSQHV
        MW+G+MRSKLC LSLLG T+FS  SVKST+HVE  ALTSATMASGFS WPTRIHTV  A A NSNV  + S  F SCSYIS +SN NIL+T  +ES Q+ 
Subjt:  MWDGKMRSKLCTLSLLGCTYFSWPSVKSTKHVEFRALTSATMASGFSLWPTRIHTVGPAIAKNSNVWALLSSDFFSCSYISSSSNCNILNTPPKESSQHV

Query:  ANDDHVSGDDNDAREVYDEEDMHIKELNINDEGVVQDVDAIMDILRGFGDVNRIEVKNELEHCCIKVLGELVVAVLSRIRNYWEATFTFFVWACKQPSYT
        ANDDHVS DD++ RE ++EEDM     N+ND+GV++DVDAIMDI  GF  VNRI+VKN+LEHCCIKV GELVVAVLSRIRN WEA FTFFVWA KQP Y 
Subjt:  ANDDHVSGDDNDAREVYDEEDMHIKELNINDEGVVQDVDAIMDILRGFGDVNRIEVKNELEHCCIKVLGELVVAVLSRIRNYWEATFTFFVWACKQPSYT

Query:  PTVREYHSM
         +VREYHSM
Subjt:  PTVREYHSM

TrEMBL top hitse value%identityAlignment
A0A0A0L308 Uncharacterized protein3.1e-6366.67Show/hide
Query:  MRSKLCTLSLLGCTYFSWPSVKSTKHVEFRALTSATMASGFSLWPTRIHTVGPAIAKNSNVWALLSSDFFSCSYISSSSNCNILNTPPKESSQHVANDDH
        MRSKLC  SLLG TYFSW SVK   HV  RALTSATMASGFSLWPTRIHTV  A   NSNV  L S  F S SY+S SSN +IL    ++S  H A  DH
Subjt:  MRSKLCTLSLLGCTYFSWPSVKSTKHVEFRALTSATMASGFSLWPTRIHTVGPAIAKNSNVWALLSSDFFSCSYISSSSNCNILNTPPKESSQHVANDDH

Query:  VSGDDNDAREVYDEEDMHIKELNINDEGVVQDVDAIMDILRGFGDVNRIEVKNELEHCCIKVLGELVVAVLSRIRNYWEATFTFFVWACKQPSYTPTVRE
         S DD+D  E  +EEDM     +IND+GV++DVDAIMDI RGF D NRI+V+N+LEHC IKV GELVVAVLSRIRN WEA FTFFVWA KQP Y  +VRE
Subjt:  VSGDDNDAREVYDEEDMHIKELNINDEGVVQDVDAIMDILRGFGDVNRIEVKNELEHCCIKVLGELVVAVLSRIRNYWEATFTFFVWACKQPSYTPTVRE

Query:  YHSM
        YHSM
Subjt:  YHSM

A0A1S3AUX2 pentatricopeptide repeat-containing protein At5g15010, mitochondrial1.5e-6567.65Show/hide
Query:  MRSKLCTLSLLGCTYFSWPSVKSTKHVEFRALTSATMASGFSLWPTRIHTVGPAIAKNSNVWALLSSDFFSCSYISSSSNCNILNTPPKESSQHVANDDH
        MRSKLC  SLLG TYFSW S+K   HV  RALTS TMASGFS WPTRIHTV  A   NSN+    S  F S SY+SSSSN +ILN  P+ES  + A++DH
Subjt:  MRSKLCTLSLLGCTYFSWPSVKSTKHVEFRALTSATMASGFSLWPTRIHTVGPAIAKNSNVWALLSSDFFSCSYISSSSNCNILNTPPKESSQHVANDDH

Query:  VSGDDNDAREVYDEEDMHIKELNINDEGVVQDVDAIMDILRGFGDVNRIEVKNELEHCCIKVLGELVVAVLSRIRNYWEATFTFFVWACKQPSYTPTVRE
         SGDD+D  E  +EEDM     +INDEGV++DVDAIMDI RGF +VNRIEVKN+LEHC IKV GELVVAVLSRIRN WEA FTFFVWA KQP Y  +VRE
Subjt:  VSGDDNDAREVYDEEDMHIKELNINDEGVVQDVDAIMDILRGFGDVNRIEVKNELEHCCIKVLGELVVAVLSRIRNYWEATFTFFVWACKQPSYTPTVRE

Query:  YHSM
        YHSM
Subjt:  YHSM

A0A5D3DB84 Pentatricopeptide repeat-containing protein1.5e-6567.65Show/hide
Query:  MRSKLCTLSLLGCTYFSWPSVKSTKHVEFRALTSATMASGFSLWPTRIHTVGPAIAKNSNVWALLSSDFFSCSYISSSSNCNILNTPPKESSQHVANDDH
        MRSKLC  SLLG TYFSW S+K   HV  RALTS TMASGFS WPTRIHTV  A   NSN+    S  F S SY+SSSSN +ILN  P+ES  + A++DH
Subjt:  MRSKLCTLSLLGCTYFSWPSVKSTKHVEFRALTSATMASGFSLWPTRIHTVGPAIAKNSNVWALLSSDFFSCSYISSSSNCNILNTPPKESSQHVANDDH

Query:  VSGDDNDAREVYDEEDMHIKELNINDEGVVQDVDAIMDILRGFGDVNRIEVKNELEHCCIKVLGELVVAVLSRIRNYWEATFTFFVWACKQPSYTPTVRE
         SGDD+D  E  +EEDM     +INDEGV++DVDAIMDI RGF +VNRIEVKN+LEHC IKV GELVVAVLSRIRN WEA FTFFVWA KQP Y  +VRE
Subjt:  VSGDDNDAREVYDEEDMHIKELNINDEGVVQDVDAIMDILRGFGDVNRIEVKNELEHCCIKVLGELVVAVLSRIRNYWEATFTFFVWACKQPSYTPTVRE

Query:  YHSM
        YHSM
Subjt:  YHSM

A0A6J1CVY6 pentatricopeptide repeat-containing protein At5g15010, mitochondrial-like1.1e-7171.77Show/hide
Query:  MWDGKMRSKLCTLSLLGCTYFSWPSVKSTKHVEFRALTSATMASGFSLWPTRIHTVGPAIAKNSNVWALLSSDFFSCSYISSSSNCNILNTPPKESSQHV
        MWDG+MRSKL +LS+LG TYFSW SVKST+ VE  ALTS TMAS FS  PTRI TV  A   N N  AL SS F SCSYIS SS  +ILN P +ESSQHV
Subjt:  MWDGKMRSKLCTLSLLGCTYFSWPSVKSTKHVEFRALTSATMASGFSLWPTRIHTVGPAIAKNSNVWALLSSDFFSCSYISSSSNCNILNTPPKESSQHV

Query:  ANDDHVSGDDNDAREVYDEEDMHIKELNINDEGVVQDVDAIMDILRGFGDVNRIEVKNELEHCCIKVLGELVVAVLSRIRNYWEATFTFFVWACKQPSYT
        ANDD VSGDDND  E Y EED++IK+L+I DEGV++DVDAI+DILRGFGDVNRI+VKN+LEHC IKV  ELVVAVLSR+RN WEA FTFFVWA KQP Y 
Subjt:  ANDDHVSGDDNDAREVYDEEDMHIKELNINDEGVVQDVDAIMDILRGFGDVNRIEVKNELEHCCIKVLGELVVAVLSRIRNYWEATFTFFVWACKQPSYT

Query:  PTVREYHSM
         +VREYHSM
Subjt:  PTVREYHSM

A0A6J1IVL9 pentatricopeptide repeat-containing protein At5g15010, mitochondrial isoform X13.0e-7469.86Show/hide
Query:  MWDGKMRSKLCTLSLLGCTYFSWPSVKSTKHVEFRALTSATMASGFSLWPTRIHTVGPAIAKNSNVWALLSSDFFSCSYISSSSNCNILNTPPKESSQHV
        MW+G+MRSK C LSLL  T+FS  SVKST+HV  RALTSAT+ASGFS WPTRIHTV P  A NSNV  L SS F S  Y S  SNC+ILN P +E+SQH 
Subjt:  MWDGKMRSKLCTLSLLGCTYFSWPSVKSTKHVEFRALTSATMASGFSLWPTRIHTVGPAIAKNSNVWALLSSDFFSCSYISSSSNCNILNTPPKESSQHV

Query:  ANDDHVSGDDNDAREVYDEEDMHIKELNINDEGVVQDVDAIMDILRGFGDVNRIEVKNELEHCCIKVLGELVVAVLSRIRNYWEATFTFFVWACKQPSYT
        ANDDHVS DD+D RE ++E++M+I++LNIND+GV++DVDAIMDI RGF +V+RI+VKN+LEHCCIKV GELVV VLSRIRN WEA FTFFVWA KQP YT
Subjt:  ANDDHVSGDDNDAREVYDEEDMHIKELNINDEGVVQDVDAIMDILRGFGDVNRIEVKNELEHCCIKVLGELVVAVLSRIRNYWEATFTFFVWACKQPSYT

Query:  PTVREYHSM
         ++REYHSM
Subjt:  PTVREYHSM

SwissProt top hitse value%identityAlignment
Q9LFQ4 Pentatricopeptide repeat-containing protein At5g15010, mitochondrial3.3e-1439.73Show/hide
Query:  SNVWALLSSDFFSCSYISSSSNCNILNTPPKESSQHVANDDHVSGDDNDAREVYDEEDMHIKELNINDEGVVQDVDAIMDILRGFGDVNRIEVKNELEHC
        SNV   LS++     Y+     C +        S  +A+ + V G      E  DE D+ +   +I+DE V +DV  I  +++  G  +R E++N+LE C
Subjt:  SNVWALLSSDFFSCSYISSSSNCNILNTPPKESSQHVANDDHVSGDDNDAREVYDEEDMHIKELNINDEGVVQDVDAIMDILRGFGDVNRIEVKNELEHC

Query:  CIKVLGELVVAVLSRIRNYWEATFTFFVWACKQPSYTPTVREYHSM
         +K   ELVV +LSR+RN WE  FTFFVWA KQ  Y  +VREYHSM
Subjt:  CIKVLGELVVAVLSRIRNYWEATFTFFVWACKQPSYTPTVREYHSM

Q9LUJ4 Pentatricopeptide repeat-containing protein At3g22670, mitochondrial1.8e-0429.6Show/hide
Query:  NILNTPPKESSQHVANDDHVSGDDNDAREVYDEE--DMHIKELNINDEGVVQDVDAIMDILRGFGDVNRIEVKNELEHCCIKVLGELVVAVLSRIRNYWE
        + L+  P  SS  V+ DD      + A  V  ++     + E N+  +  V+D+D + D L    D +  +V  EL  C + V   LV+ VL R  N W 
Subjt:  NILNTPPKESSQHVANDDHVSGDDNDAREVYDEE--DMHIKELNINDEGVVQDVDAIMDILRGFGDVNRIEVKNELEHCCIKVLGELVVAVLSRIRNYWE

Query:  ATFTFFVWACKQPSYTPTVREYHSM
          + FF+WA  Q  Y  +   Y++M
Subjt:  ATFTFFVWACKQPSYTPTVREYHSM

Arabidopsis top hitse value%identityAlignment
AT1G77360.1 Tetratricopeptide repeat (TPR)-like superfamily protein5.5e-0434.62Show/hide
Query:  VQDV-DAIMDILRGFGDVNRIEVKNELEHCCIKVLGELVVAVLSRIRNYWEATFTFFVWACKQPSYTPTVREYHSMNE
        V+DV D   +I +      ++ + + L+   ++V  E+V  VL+R RN    T+ FF W+ KQ  Y  +VR YH M E
Subjt:  VQDV-DAIMDILRGFGDVNRIEVKNELEHCCIKVLGELVVAVLSRIRNYWEATFTFFVWACKQPSYTPTVREYHSMNE

AT3G22670.1 Pentatricopeptide repeat (PPR) superfamily protein1.3e-0529.6Show/hide
Query:  NILNTPPKESSQHVANDDHVSGDDNDAREVYDEE--DMHIKELNINDEGVVQDVDAIMDILRGFGDVNRIEVKNELEHCCIKVLGELVVAVLSRIRNYWE
        + L+  P  SS  V+ DD      + A  V  ++     + E N+  +  V+D+D + D L    D +  +V  EL  C + V   LV+ VL R  N W 
Subjt:  NILNTPPKESSQHVANDDHVSGDDNDAREVYDEE--DMHIKELNINDEGVVQDVDAIMDILRGFGDVNRIEVKNELEHCCIKVLGELVVAVLSRIRNYWE

Query:  ATFTFFVWACKQPSYTPTVREYHSM
          + FF+WA  Q  Y  +   Y++M
Subjt:  ATFTFFVWACKQPSYTPTVREYHSM

AT5G15010.1 Tetratricopeptide repeat (TPR)-like superfamily protein2.4e-1539.73Show/hide
Query:  SNVWALLSSDFFSCSYISSSSNCNILNTPPKESSQHVANDDHVSGDDNDAREVYDEEDMHIKELNINDEGVVQDVDAIMDILRGFGDVNRIEVKNELEHC
        SNV   LS++     Y+     C +        S  +A+ + V G      E  DE D+ +   +I+DE V +DV  I  +++  G  +R E++N+LE C
Subjt:  SNVWALLSSDFFSCSYISSSSNCNILNTPPKESSQHVANDDHVSGDDNDAREVYDEEDMHIKELNINDEGVVQDVDAIMDILRGFGDVNRIEVKNELEHC

Query:  CIKVLGELVVAVLSRIRNYWEATFTFFVWACKQPSYTPTVREYHSM
         +K   ELVV +LSR+RN WE  FTFFVWA KQ  Y  +VREYHSM
Subjt:  CIKVLGELVVAVLSRIRNYWEATFTFFVWACKQPSYTPTVREYHSM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGGATGGAAAAATGAGATCAAAGTTGTGCACATTGTCTCTTTTGGGATGTACGTATTTCAGTTGGCCTTCTGTTAAATCCACTAAACATGTTGAGTTCAGAGCTCT
TACCAGTGCTACAATGGCCTCTGGTTTTAGTTTGTGGCCTACTCGCATCCATACTGTCGGCCCTGCCATTGCAAAGAACTCCAATGTTTGGGCTCTTTTATCTTCTGACT
TTTTCTCCTGTTCTTATATTTCTTCGAGCTCAAATTGTAATATTTTGAACACCCCTCCAAAAGAATCTAGTCAACATGTTGCCAATGACGATCATGTTAGCGGCGATGAC
AACGATGCTCGAGAAGTATATGATGAGGAGGACATGCACATTAAGGAATTGAACATCAATGACGAGGGTGTAGTACAAGATGTTGATGCCATTATGGATATATTACGTGG
GTTTGGAGATGTGAATCGAATTGAAGTGAAAAATGAGCTTGAGCATTGTTGTATTAAGGTCTTGGGAGAGTTGGTGGTAGCAGTACTTTCTCGAATTCGTAACTATTGGG
AAGCAACGTTTACTTTTTTTGTTTGGGCTTGTAAGCAGCCTAGCTATACTCCCACCGTCCGTGAATATCATTCAATGAATGAGAAAGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTGGGATGGAAAAATGAGATCAAAGTTGTGCACATTGTCTCTTTTGGGATGTACGTATTTCAGTTGGCCTTCTGTTAAATCCACTAAACATGTTGAGTTCAGAGCTCT
TACCAGTGCTACAATGGCCTCTGGTTTTAGTTTGTGGCCTACTCGCATCCATACTGTCGGCCCTGCCATTGCAAAGAACTCCAATGTTTGGGCTCTTTTATCTTCTGACT
TTTTCTCCTGTTCTTATATTTCTTCGAGCTCAAATTGTAATATTTTGAACACCCCTCCAAAAGAATCTAGTCAACATGTTGCCAATGACGATCATGTTAGCGGCGATGAC
AACGATGCTCGAGAAGTATATGATGAGGAGGACATGCACATTAAGGAATTGAACATCAATGACGAGGGTGTAGTACAAGATGTTGATGCCATTATGGATATATTACGTGG
GTTTGGAGATGTGAATCGAATTGAAGTGAAAAATGAGCTTGAGCATTGTTGTATTAAGGTCTTGGGAGAGTTGGTGGTAGCAGTACTTTCTCGAATTCGTAACTATTGGG
AAGCAACGTTTACTTTTTTTGTTTGGGCTTGTAAGCAGCCTAGCTATACTCCCACCGTCCGTGAATATCATTCAATGAATGAGAAAGTTTGA
Protein sequenceShow/hide protein sequence
MWDGKMRSKLCTLSLLGCTYFSWPSVKSTKHVEFRALTSATMASGFSLWPTRIHTVGPAIAKNSNVWALLSSDFFSCSYISSSSNCNILNTPPKESSQHVANDDHVSGDD
NDAREVYDEEDMHIKELNINDEGVVQDVDAIMDILRGFGDVNRIEVKNELEHCCIKVLGELVVAVLSRIRNYWEATFTFFVWACKQPSYTPTVREYHSMNEKV