; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0018757 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0018757
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionPentatricopeptide repeat-containing protein
Genome locationchr5:33927855..33929634
RNA-Seq ExpressionLag0018757
SyntenyLag0018757
Gene Ontology termsGO:0005739 - mitochondrion (cellular component)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022145432.1 pentatricopeptide repeat-containing protein At5g15010, mitochondrial-like [Momordica charantia]1.9e-5185.48Show/hide
Query:  MKDAEYLLFCNKDVFPFSTKSINIILNGWCN-ISSLRDAERIWEEMTRRGISHDVVSYASIISGYSKARNLYKVLRHFDNMKQIKIDPDRKVYNAVIHAL
        +KDAEYLLFCNKDVFPF+TKS NIILNGWCN I SLRDAERIW+EMT+RGISHD VSYASIIS YSKAR+LYKVLR FDNMKQ+KI+PDRKVYNAVIHAL
Subjt:  MKDAEYLLFCNKDVFPFSTKSINIILNGWCN-ISSLRDAERIWEEMTRRGISHDVVSYASIISGYSKARNLYKVLRHFDNMKQIKIDPDRKVYNAVIHAL

Query:  AKSGLLKEAKNLIKTMEEKGIIAN
        AK GLLKEA +LIK MEEKGIIA+
Subjt:  AKSGLLKEAKNLIKTMEEKGIIAN

XP_022979235.1 pentatricopeptide repeat-containing protein At5g15010, mitochondrial isoform X1 [Cucurbita maxima]9.2e-5183.87Show/hide
Query:  MKDAEYLLFCNKDVFPFSTKSINIILNGWCN-ISSLRDAERIWEEMTRRGISHDVVSYASIISGYSKARNLYKVLRHFDNMKQIKIDPDRKVYNAVIHAL
        +KDAEYLLFCNKD FPF+TKS NI+LNGWCN I SLRDAERIW EMT+RGI HD VSYASIIS YSK RNLY+VLR FDNMKQ+KIDPDRKVYNAVIHAL
Subjt:  MKDAEYLLFCNKDVFPFSTKSINIILNGWCN-ISSLRDAERIWEEMTRRGISHDVVSYASIISGYSKARNLYKVLRHFDNMKQIKIDPDRKVYNAVIHAL

Query:  AKSGLLKEAKNLIKTMEEKGIIAN
        AK GLLKEA +LIKTMEEKGII N
Subjt:  AKSGLLKEAKNLIKTMEEKGIIAN

XP_022979239.1 pentatricopeptide repeat-containing protein At5g15010, mitochondrial isoform X2 [Cucurbita maxima]9.2e-5183.87Show/hide
Query:  MKDAEYLLFCNKDVFPFSTKSINIILNGWCN-ISSLRDAERIWEEMTRRGISHDVVSYASIISGYSKARNLYKVLRHFDNMKQIKIDPDRKVYNAVIHAL
        +KDAEYLLFCNKD FPF+TKS NI+LNGWCN I SLRDAERIW EMT+RGI HD VSYASIIS YSK RNLY+VLR FDNMKQ+KIDPDRKVYNAVIHAL
Subjt:  MKDAEYLLFCNKDVFPFSTKSINIILNGWCN-ISSLRDAERIWEEMTRRGISHDVVSYASIISGYSKARNLYKVLRHFDNMKQIKIDPDRKVYNAVIHAL

Query:  AKSGLLKEAKNLIKTMEEKGIIAN
        AK GLLKEA +LIKTMEEKGII N
Subjt:  AKSGLLKEAKNLIKTMEEKGIIAN

XP_023527396.1 pentatricopeptide repeat-containing protein At5g15010, mitochondrial isoform X1 [Cucurbita pepo subsp. pepo]9.2e-5183.87Show/hide
Query:  MKDAEYLLFCNKDVFPFSTKSINIILNGWCN-ISSLRDAERIWEEMTRRGISHDVVSYASIISGYSKARNLYKVLRHFDNMKQIKIDPDRKVYNAVIHAL
        +KDAEYLLFCNKDVFPF+TKS NI+LNGWCN I SLRDAERIW EM +RGI HD VSYASIIS YSK RNLY+VLR FDNMKQ+KIDPDRKVYNAVIHAL
Subjt:  MKDAEYLLFCNKDVFPFSTKSINIILNGWCN-ISSLRDAERIWEEMTRRGISHDVVSYASIISGYSKARNLYKVLRHFDNMKQIKIDPDRKVYNAVIHAL

Query:  AKSGLLKEAKNLIKTMEEKGIIAN
        AK GLLKEA +LIKTMEEKGII N
Subjt:  AKSGLLKEAKNLIKTMEEKGIIAN

XP_023527399.1 pentatricopeptide repeat-containing protein At5g15010, mitochondrial isoform X2 [Cucurbita pepo subsp. pepo]9.2e-5183.87Show/hide
Query:  MKDAEYLLFCNKDVFPFSTKSINIILNGWCN-ISSLRDAERIWEEMTRRGISHDVVSYASIISGYSKARNLYKVLRHFDNMKQIKIDPDRKVYNAVIHAL
        +KDAEYLLFCNKDVFPF+TKS NI+LNGWCN I SLRDAERIW EM +RGI HD VSYASIIS YSK RNLY+VLR FDNMKQ+KIDPDRKVYNAVIHAL
Subjt:  MKDAEYLLFCNKDVFPFSTKSINIILNGWCN-ISSLRDAERIWEEMTRRGISHDVVSYASIISGYSKARNLYKVLRHFDNMKQIKIDPDRKVYNAVIHAL

Query:  AKSGLLKEAKNLIKTMEEKGIIAN
        AK GLLKEA +LIKTMEEKGII N
Subjt:  AKSGLLKEAKNLIKTMEEKGIIAN

TrEMBL top hitse value%identityAlignment
A0A0A0L308 Uncharacterized protein3.2e-4980.49Show/hide
Query:  MKDAEYLLFCNKDVFPFSTKSINIILNGWCNISSLRDAERIWEEMTRRGISHDVVSYASIISGYSKARNLYKVLRHFDNMKQIKIDPDRKVYNAVIHALA
        +KDAEYLLFCNKDVFPF+TKS NIILNGWC I SLRD ER+W+EMTRRGISHD VSYAS IS YSK RNL+KVLR F++MK++KIDPDRKVYNAVIH+LA
Subjt:  MKDAEYLLFCNKDVFPFSTKSINIILNGWCNISSLRDAERIWEEMTRRGISHDVVSYASIISGYSKARNLYKVLRHFDNMKQIKIDPDRKVYNAVIHALA

Query:  KSGLLKEAKNLIKTMEEKGIIAN
        K   LKEA +LIKTMEEKGIIAN
Subjt:  KSGLLKEAKNLIKTMEEKGIIAN

A0A6J1CVY6 pentatricopeptide repeat-containing protein At5g15010, mitochondrial-like9.0e-5285.48Show/hide
Query:  MKDAEYLLFCNKDVFPFSTKSINIILNGWCN-ISSLRDAERIWEEMTRRGISHDVVSYASIISGYSKARNLYKVLRHFDNMKQIKIDPDRKVYNAVIHAL
        +KDAEYLLFCNKDVFPF+TKS NIILNGWCN I SLRDAERIW+EMT+RGISHD VSYASIIS YSKAR+LYKVLR FDNMKQ+KI+PDRKVYNAVIHAL
Subjt:  MKDAEYLLFCNKDVFPFSTKSINIILNGWCN-ISSLRDAERIWEEMTRRGISHDVVSYASIISGYSKARNLYKVLRHFDNMKQIKIDPDRKVYNAVIHAL

Query:  AKSGLLKEAKNLIKTMEEKGIIAN
        AK GLLKEA +LIK MEEKGIIA+
Subjt:  AKSGLLKEAKNLIKTMEEKGIIAN

A0A6J1E902 pentatricopeptide repeat-containing protein At5g15010, mitochondrial1.7e-5083.06Show/hide
Query:  MKDAEYLLFCNKDVFPFSTKSINIILNGWCN-ISSLRDAERIWEEMTRRGISHDVVSYASIISGYSKARNLYKVLRHFDNMKQIKIDPDRKVYNAVIHAL
        +KDAEYLLFCNKDVFP +TKS NI+LNGWCN I SLRDAERIW EMT+RGI HD VSYASIIS YSK RNLY+V+R FDNMKQ+KIDPDRKVYNAVIHAL
Subjt:  MKDAEYLLFCNKDVFPFSTKSINIILNGWCN-ISSLRDAERIWEEMTRRGISHDVVSYASIISGYSKARNLYKVLRHFDNMKQIKIDPDRKVYNAVIHAL

Query:  AKSGLLKEAKNLIKTMEEKGIIAN
        AK GLLKEA +LIKTMEEKGII N
Subjt:  AKSGLLKEAKNLIKTMEEKGIIAN

A0A6J1IVL9 pentatricopeptide repeat-containing protein At5g15010, mitochondrial isoform X14.5e-5183.87Show/hide
Query:  MKDAEYLLFCNKDVFPFSTKSINIILNGWCN-ISSLRDAERIWEEMTRRGISHDVVSYASIISGYSKARNLYKVLRHFDNMKQIKIDPDRKVYNAVIHAL
        +KDAEYLLFCNKD FPF+TKS NI+LNGWCN I SLRDAERIW EMT+RGI HD VSYASIIS YSK RNLY+VLR FDNMKQ+KIDPDRKVYNAVIHAL
Subjt:  MKDAEYLLFCNKDVFPFSTKSINIILNGWCN-ISSLRDAERIWEEMTRRGISHDVVSYASIISGYSKARNLYKVLRHFDNMKQIKIDPDRKVYNAVIHAL

Query:  AKSGLLKEAKNLIKTMEEKGIIAN
        AK GLLKEA +LIKTMEEKGII N
Subjt:  AKSGLLKEAKNLIKTMEEKGIIAN

A0A6J1IW50 pentatricopeptide repeat-containing protein At5g15010, mitochondrial isoform X24.5e-5183.87Show/hide
Query:  MKDAEYLLFCNKDVFPFSTKSINIILNGWCN-ISSLRDAERIWEEMTRRGISHDVVSYASIISGYSKARNLYKVLRHFDNMKQIKIDPDRKVYNAVIHAL
        +KDAEYLLFCNKD FPF+TKS NI+LNGWCN I SLRDAERIW EMT+RGI HD VSYASIIS YSK RNLY+VLR FDNMKQ+KIDPDRKVYNAVIHAL
Subjt:  MKDAEYLLFCNKDVFPFSTKSINIILNGWCN-ISSLRDAERIWEEMTRRGISHDVVSYASIISGYSKARNLYKVLRHFDNMKQIKIDPDRKVYNAVIHAL

Query:  AKSGLLKEAKNLIKTMEEKGIIAN
        AK GLLKEA +LIKTMEEKGII N
Subjt:  AKSGLLKEAKNLIKTMEEKGIIAN

SwissProt top hitse value%identityAlignment
O04491 Putative pentatricopeptide repeat-containing protein At1g096801.8e-1233.03Show/hide
Query:  FPFSTKSINIILNGWCNISSLRDAERIWEEMTRRGISHDVVSYASIISGYSKARNLYKVLRHFDNMKQIKIDPDRKVYNAVIHALAKSGLLKEAKNLIKT
        FP +    NI++N +C   ++ DA+++++E+T+R +   VVS+ ++I+GY K  NL +  R    M++ +  PD   Y+A+I+AL K   +  A  L   
Subjt:  FPFSTKSINIILNGWCNISSLRDAERIWEEMTRRGISHDVVSYASIISGYSKARNLYKVLRHFDNMKQIKIDPDRKVYNAVIHALAKSGLLKEAKNLIKT

Query:  MEEKGIIAN
        M ++G+I N
Subjt:  MEEKGIIAN

Q9FIT7 Pentatricopeptide repeat-containing protein At5g61990, mitochondrial3.9e-1234.62Show/hide
Query:  KSINIILNGWCNISSLRDAERIWEEMTRRGISHDVVSYASIISGYSKARNLYKVLRHFDNMKQIKIDPDRKVYNAVIHALAKSGLLKEAKNLIKTMEEKG
        K+  +++NG      + DAE I+ EM  +GI+ DV SY  +I+G+SK  N+ K    FD M +  + P+  +YN ++    +SG +++AK L+  M  KG
Subjt:  KSINIILNGWCNISSLRDAERIWEEMTRRGISHDVVSYASIISGYSKARNLYKVLRHFDNMKQIKIDPDRKVYNAVIHALAKSGLLKEAKNLIKTMEEKG

Query:  IIAN
        +  N
Subjt:  IIAN

Q9LFQ4 Pentatricopeptide repeat-containing protein At5g15010, mitochondrial1.6e-3762.4Show/hide
Query:  MKDAEYLLFCNKDVFPFSTKSINIILNGWCN-ISSLRDAERIWEEMTRRGISHDVVSYASIISGYSKARNLYKVLRHFDNMKQIKIDPDRKVYNAVIHAL
        + DA +L+FCNKD +PF  KS NI+LNGWCN I S R+AER+W EM   G+ HDVVSY+S+IS YSK  +L KVL+ FD MK+  I+PDRKVYNAV+HAL
Subjt:  MKDAEYLLFCNKDVFPFSTKSINIILNGWCN-ISSLRDAERIWEEMTRRGISHDVVSYASIISGYSKARNLYKVLRHFDNMKQIKIDPDRKVYNAVIHAL

Query:  AKSGLLKEAKNLIKTM-EEKGIIAN
        AK+  + EA+NL+KTM EEKGI  N
Subjt:  AKSGLLKEAKNLIKTM-EEKGIIAN

Q9LIL5 Putative pentatricopeptide repeat-containing protein At3g152005.1e-1232.76Show/hide
Query:  AEYLLFCNKDVFPFSTKSINIILNGWCNISSLRDAERIWEEMTRRGISHDVVSYASIISGYSKARNLYKVLRHFDNMKQIKIDPDRKVYNAVIHALAKSG
        AE L    +  F    K++N+ILNGWC + ++ +A+R W+++       DVVSY ++I+  +K   L K +  +  M   + +PD K+ N VI AL    
Subjt:  AEYLLFCNKDVFPFSTKSINIILNGWCNISSLRDAERIWEEMTRRGISHDVVSYASIISGYSKARNLYKVLRHFDNMKQIKIDPDRKVYNAVIHALAKSG

Query:  LLKEAKNLIKTMEEKG
         + EA  + + + EKG
Subjt:  LLKEAKNLIKTMEEKG

Q9SAH2 Pentatricopeptide repeat-containing protein At1g80880, mitochondrial2.1e-1837.19Show/hide
Query:  MKDAEYLLFCNKDVFPFSTKSINIILNGWCNI-SSLRDAERIWEEMTRRGISHDVVSYASIISGYSKARNLYKVLRHFDNMKQIKIDPDRKVYNAVIHAL
        ++ AE  +  +K +FP   +  N+ILNGWCNI + + +A+RIW EM    I+ +  SY+ +IS +SK  NL+  LR +D MK+  + P  +VYN++++ L
Subjt:  MKDAEYLLFCNKDVFPFSTKSINIILNGWCNI-SSLRDAERIWEEMTRRGISHDVVSYASIISGYSKARNLYKVLRHFDNMKQIKIDPDRKVYNAVIHAL

Query:  AKSGLLKEAKNLIKTMEEKGI
         +     EA  L+K + E+G+
Subjt:  AKSGLLKEAKNLIKTMEEKGI

Arabidopsis top hitse value%identityAlignment
AT1G09680.1 Pentatricopeptide repeat (PPR) superfamily protein1.3e-1333.03Show/hide
Query:  FPFSTKSINIILNGWCNISSLRDAERIWEEMTRRGISHDVVSYASIISGYSKARNLYKVLRHFDNMKQIKIDPDRKVYNAVIHALAKSGLLKEAKNLIKT
        FP +    NI++N +C   ++ DA+++++E+T+R +   VVS+ ++I+GY K  NL +  R    M++ +  PD   Y+A+I+AL K   +  A  L   
Subjt:  FPFSTKSINIILNGWCNISSLRDAERIWEEMTRRGISHDVVSYASIISGYSKARNLYKVLRHFDNMKQIKIDPDRKVYNAVIHALAKSGLLKEAKNLIKT

Query:  MEEKGIIAN
        M ++G+I N
Subjt:  MEEKGIIAN

AT1G80880.1 Tetratricopeptide repeat (TPR)-like superfamily protein1.5e-1937.19Show/hide
Query:  MKDAEYLLFCNKDVFPFSTKSINIILNGWCNI-SSLRDAERIWEEMTRRGISHDVVSYASIISGYSKARNLYKVLRHFDNMKQIKIDPDRKVYNAVIHAL
        ++ AE  +  +K +FP   +  N+ILNGWCNI + + +A+RIW EM    I+ +  SY+ +IS +SK  NL+  LR +D MK+  + P  +VYN++++ L
Subjt:  MKDAEYLLFCNKDVFPFSTKSINIILNGWCNI-SSLRDAERIWEEMTRRGISHDVVSYASIISGYSKARNLYKVLRHFDNMKQIKIDPDRKVYNAVIHAL

Query:  AKSGLLKEAKNLIKTMEEKGI
         +     EA  L+K + E+G+
Subjt:  AKSGLLKEAKNLIKTMEEKGI

AT3G15200.1 Tetratricopeptide repeat (TPR)-like superfamily protein3.6e-1332.76Show/hide
Query:  AEYLLFCNKDVFPFSTKSINIILNGWCNISSLRDAERIWEEMTRRGISHDVVSYASIISGYSKARNLYKVLRHFDNMKQIKIDPDRKVYNAVIHALAKSG
        AE L    +  F    K++N+ILNGWC + ++ +A+R W+++       DVVSY ++I+  +K   L K +  +  M   + +PD K+ N VI AL    
Subjt:  AEYLLFCNKDVFPFSTKSINIILNGWCNISSLRDAERIWEEMTRRGISHDVVSYASIISGYSKARNLYKVLRHFDNMKQIKIDPDRKVYNAVIHALAKSG

Query:  LLKEAKNLIKTMEEKG
         + EA  + + + EKG
Subjt:  LLKEAKNLIKTMEEKG

AT5G15010.1 Tetratricopeptide repeat (TPR)-like superfamily protein1.1e-3862.4Show/hide
Query:  MKDAEYLLFCNKDVFPFSTKSINIILNGWCN-ISSLRDAERIWEEMTRRGISHDVVSYASIISGYSKARNLYKVLRHFDNMKQIKIDPDRKVYNAVIHAL
        + DA +L+FCNKD +PF  KS NI+LNGWCN I S R+AER+W EM   G+ HDVVSY+S+IS YSK  +L KVL+ FD MK+  I+PDRKVYNAV+HAL
Subjt:  MKDAEYLLFCNKDVFPFSTKSINIILNGWCN-ISSLRDAERIWEEMTRRGISHDVVSYASIISGYSKARNLYKVLRHFDNMKQIKIDPDRKVYNAVIHAL

Query:  AKSGLLKEAKNLIKTM-EEKGIIAN
        AK+  + EA+NL+KTM EEKGI  N
Subjt:  AKSGLLKEAKNLIKTM-EEKGIIAN

AT5G61990.1 Pentatricopeptide repeat (PPR) superfamily protein2.8e-1334.62Show/hide
Query:  KSINIILNGWCNISSLRDAERIWEEMTRRGISHDVVSYASIISGYSKARNLYKVLRHFDNMKQIKIDPDRKVYNAVIHALAKSGLLKEAKNLIKTMEEKG
        K+  +++NG      + DAE I+ EM  +GI+ DV SY  +I+G+SK  N+ K    FD M +  + P+  +YN ++    +SG +++AK L+  M  KG
Subjt:  KSINIILNGWCNISSLRDAERIWEEMTRRGISHDVVSYASIISGYSKARNLYKVLRHFDNMKQIKIDPDRKVYNAVIHALAKSGLLKEAKNLIKTMEEKG

Query:  IIAN
        +  N
Subjt:  IIAN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGATGCTGAATATTTACTGTTTTGCAATAAAGATGTGTTCCCATTTAGCACAAAGAGCATCAATATTATCCTCAATGGATGGTGTAATATAAGCAGTCTTCGTGA
TGCTGAGAGAATTTGGGAGGAGATGACGAGAAGAGGTATCAGTCATGATGTTGTCTCATATGCAAGTATCATTTCTGGTTACTCAAAAGCTCGCAACCTTTATAAGGTAC
TCAGACATTTTGACAATATGAAGCAAATTAAAATTGACCCTGATAGGAAAGTCTACAATGCAGTCATTCATGCTCTTGCCAAAAGTGGGCTTTTGAAAGAAGCTAAAAAT
CTCATAAAAACGATGGAAGAGAAGGGGATTATTGCAAATTATGAACCAGCCCCCTTTGCGTTTTTTTCTCCCGCCGGCCAGCACCCCCGCGCTGTCGCTGCTACTCTAGA
TTCCGTAGCTAGTGGTGGAAGCCGTCGTCCCCCTCCCGTCGTGCCGCTGTCTGTTCAGCTCGCATTGTCATCGTTTTCTCTCCCTCTTTCTCTCATGTTTCGGGCGACTG
TGAGCAGACCCACACAAATCTCTCCTTCTCCCTCGTTCTACTTCTCTTTTTCGACTCAAGTATCAAAAGTATCTGCGAGGTTGTGGAGTTTTGTAGCCGATCTGCGAAGC
CCAGGCGTTTTCTCGCCGTTAGCCGATCTCTCTCTCTGTCCAGCGAGTCTCACGTTGTTTTCGGCCCTCGTATGTTGTGTGTTCGACGTTTTCGCGCTGTGCAGTGTCGT
CTTGGACTTGAAATTGGCTTTTGACGAATACCCATAA
mRNA sequenceShow/hide mRNA sequence
ATGAAAGATGCTGAATATTTACTGTTTTGCAATAAAGATGTGTTCCCATTTAGCACAAAGAGCATCAATATTATCCTCAATGGATGGTGTAATATAAGCAGTCTTCGTGA
TGCTGAGAGAATTTGGGAGGAGATGACGAGAAGAGGTATCAGTCATGATGTTGTCTCATATGCAAGTATCATTTCTGGTTACTCAAAAGCTCGCAACCTTTATAAGGTAC
TCAGACATTTTGACAATATGAAGCAAATTAAAATTGACCCTGATAGGAAAGTCTACAATGCAGTCATTCATGCTCTTGCCAAAAGTGGGCTTTTGAAAGAAGCTAAAAAT
CTCATAAAAACGATGGAAGAGAAGGGGATTATTGCAAATTATGAACCAGCCCCCTTTGCGTTTTTTTCTCCCGCCGGCCAGCACCCCCGCGCTGTCGCTGCTACTCTAGA
TTCCGTAGCTAGTGGTGGAAGCCGTCGTCCCCCTCCCGTCGTGCCGCTGTCTGTTCAGCTCGCATTGTCATCGTTTTCTCTCCCTCTTTCTCTCATGTTTCGGGCGACTG
TGAGCAGACCCACACAAATCTCTCCTTCTCCCTCGTTCTACTTCTCTTTTTCGACTCAAGTATCAAAAGTATCTGCGAGGTTGTGGAGTTTTGTAGCCGATCTGCGAAGC
CCAGGCGTTTTCTCGCCGTTAGCCGATCTCTCTCTCTGTCCAGCGAGTCTCACGTTGTTTTCGGCCCTCGTATGTTGTGTGTTCGACGTTTTCGCGCTGTGCAGTGTCGT
CTTGGACTTGAAATTGGCTTTTGACGAATACCCATAA
Protein sequenceShow/hide protein sequence
MKDAEYLLFCNKDVFPFSTKSINIILNGWCNISSLRDAERIWEEMTRRGISHDVVSYASIISGYSKARNLYKVLRHFDNMKQIKIDPDRKVYNAVIHALAKSGLLKEAKN
LIKTMEEKGIIANYEPAPFAFFSPAGQHPRAVAATLDSVASGGSRRPPPVVPLSVQLALSSFSLPLSLMFRATVSRPTQISPSPSFYFSFSTQVSKVSARLWSFVADLRS
PGVFSPLADLSLCPASLTLFSALVCCVFDVFALCSVVLDLKLAFDEYP