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Lag0018782 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0018782
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr5:34270574..34271258
RNA-Seq ExpressionLag0018782
SyntenyLag0018782
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CCA66054.1 hypothetical protein [Beta vulgaris subsp. vulgaris]4.0e-2031.1Show/hide
Query:  FHTQAS-RKRSNTIRGLEDSDGVWQQEPDRVLGLIEEYFEGVFSSSNPTETDIEQVVARVSAIVTSEMNDRLLMPFQQDEILRALKQIHPNKALGPDGLS
        FH +AS RK+ N ++GL D  G W++E D +  +   YF  +F+SSNP++  +E V++ +  +VT E N +LL PF +DEIL AL+Q+HP KA GPDG+ 
Subjt:  FHTQAS-RKRSNTIRGLEDSDGVWQQEPDRVLGLIEEYFEGVFSSSNPTETDIEQVVARVSAIVTSEMNDRLLMPFQQDEILRALKQIHPNKALGPDGLS

Query:  GAFYQH-----------------------------------------------------------SRGL---LKGMLDGIVSHNQNVFIPGLCVVDKAIL
          FYQ                                                            S+ +   LK  L  I+S NQ+ F+PG  + D A++
Subjt:  GAFYQH-----------------------------------------------------------SRGL---LKGMLDGIVSHNQNVFIPGLCVVDKAIL

Query:  GYECIHALK
          E  H++K
Subjt:  GYECIHALK

XP_015380705.1 uncharacterized protein LOC107174377 [Citrus sinensis]8.0e-2138.67Show/hide
Query:  FHTQA-SRKRSNTIRGLEDSDGVWQQEPDRVLGLIEEYFEGVFSSSNPTETDIEQVVARVSAIVTSEMNDRLLMPFQQDEILRALKQIHPNKALGPDGLS
        FH +A SRKR N I G+EDS   W    + V   +  YF  +FS++ P +  ++  +  ++  VT EMND+L  PF ++EIL AL Q+ P KA GPDG  
Subjt:  FHTQA-SRKRSNTIRGLEDSDGVWQQEPDRVLGLIEEYFEGVFSSSNPTETDIEQVVARVSAIVTSEMNDRLLMPFQQDEILRALKQIHPNKALGPDGLS

Query:  GAFYQHSRGLLKGMLDGIVSHNQNVFIPGLCVVDKAILGYECIHALKVKK
            +     LK +L  ++S  Q+ FIP   + D  I+GYEC+H ++  K
Subjt:  GAFYQHSRGLLKGMLDGIVSHNQNVFIPGLCVVDKAILGYECIHALKVKK

XP_021760236.1 uncharacterized protein LOC110725072 [Chenopodium quinoa]8.3e-2638.96Show/hide
Query:  FHTQAS-RKRSNTIRGLEDSDGVWQQEPDRVLGLIEEYFEGVFSSSNPTETDIEQVVARVSAIVTSEMNDRLLMPFQQDEILRALKQIHPNKALGPDGLS
        FH +AS R+R NTI GL D +G+W+++ + +  ++ +YFE +F+SS PT    + V+ +V A+++  MNDRL  P+ ++++  ALKQ+HP+KA GPD + 
Subjt:  FHTQAS-RKRSNTIRGLEDSDGVWQQEPDRVLGLIEEYFEGVFSSSNPTETDIEQVVARVSAIVTSEMNDRLLMPFQQDEILRALKQIHPNKALGPDGLS

Query:  GAFYQHSRGLLKGMLDGIVSHNQNVFIPGLCVVDKAILGYECIHALKVKKHVGR
                  LK +L  I+S NQ+ F+P   + D A++  EC H++K K+  GR
Subjt:  GAFYQHSRGLLKGMLDGIVSHNQNVFIPGLCVVDKAILGYECIHALKVKKHVGR

XP_022150918.1 uncharacterized protein LOC111018954 [Momordica charantia]4.1e-2541.42Show/hide
Query:  FHTQAS-RKRSNTIRGLEDSDGVWQQEPDRVLGLIEEYFEGVFSSSNPTETDIEQVVARVSAIVTSEMNDRLLMPFQQDEILRALKQIHPNKALGPDGLS
        FHT+AS R+R+N I+GL D  G W++   +V+G+IE YF  +FSSS P+ + IEQV   + A V+S  N  LL PF ++E++ AL QIHP+KALGPD  S
Subjt:  FHTQAS-RKRSNTIRGLEDSDGVWQQEPDRVLGLIEEYFEGVFSSSNPTETDIEQVVARVSAIVTSEMNDRLLMPFQQDEILRALKQIHPNKALGPDGLS

Query:  GAFYQH--------------------------SRGLLKGMLDGIVSHNQNVFIPGLCVVDKAILGYECI
         AFY++                          S  +LK  LD ++S +Q+ FIP   + D AILG+E +
Subjt:  GAFYQH--------------------------SRGLLKGMLDGIVSHNQNVFIPGLCVVDKAILGYECI

XP_023905045.1 uncharacterized protein LOC112016795 [Quercus suber]5.2e-2049.06Show/hide
Query:  FHTQAS-RKRSNTIRGLEDSDGVWQQEPDRVLGLIEEYFEGVFSSSNPTETDIEQVVARVSAIVTSEMNDRLLMPFQQDEILRALKQIHPNKALGPDGLS
        FH +AS RK  N IRG+ DS+GVWQ++   V  ++ +YF  +F S+ PT+T   Q+ A +  +VT++MN+ L  PFQ DEI +ALKQ+HP K+ GPDG+ 
Subjt:  FHTQAS-RKRSNTIRGLEDSDGVWQQEPDRVLGLIEEYFEGVFSSSNPTETDIEQVVARVSAIVTSEMNDRLLMPFQQDEILRALKQIHPNKALGPDGLS

Query:  GAFYQH
          FYQH
Subjt:  GAFYQH

TrEMBL top hitse value%identityAlignment
A0A2N9EDG5 CCHC-type domain-containing protein1.9e-2337.65Show/hide
Query:  HECSFHTQASRKRSNTIRGLEDSDGVWQQEPDRVLGLIEEYFEGVFSSSNPTETDIEQVVARVSAIVTSEMNDRLLMPFQQDEILRALKQIHPNKALGPD
        HEC+    + R+++NT+ GL+DS+ VWQ +PD +  ++ EYF+ +F SS+P  T I +V+  V   +T EMN  LL PF  +E+  AL QI P+KA GPD
Subjt:  HECSFHTQASRKRSNTIRGLEDSDGVWQQEPDRVLGLIEEYFEGVFSSSNPTETDIEQVVARVSAIVTSEMNDRLLMPFQQDEILRALKQIHPNKALGPD

Query:  GLSGAFYQH---------SRGLLKGMLDGIVSHNQNVFIPGLCVVDKAILGYECIHALKVKK
        G++  F+Q          +  +L  +   ++S  Q+ F+PG  + D  I+ +E +H LK K+
Subjt:  GLSGAFYQH---------SRGLLKGMLDGIVSHNQNVFIPGLCVVDKAILGYECIHALKVKK

A0A2N9EEA9 CCHC-type domain-containing protein2.6e-2538.99Show/hide
Query:  FHTQAS-RKRSNTIRGLEDSDGVWQQEPDRVLGLIEEYFEGVFSSSNPTETDIEQVVARVSAIVTSEMNDRLLMPFQQDEILRALKQIHPNKALGPDGLS
        FH Q + R+++N I GL DSDG WQ +  +V  L  EYF  +F+SS P    I+  +  V  +VT +MND LL  F ++E+ +AL Q++P KA GPDG+S
Subjt:  FHTQAS-RKRSNTIRGLEDSDGVWQQEPDRVLGLIEEYFEGVFSSSNPTETDIEQVVARVSAIVTSEMNDRLLMPFQQDEILRALKQIHPNKALGPDGLS

Query:  GAFYQH---------SRGLLKGMLDGIVSHNQNVFIPGLCVVDKAILGYECIHALKVKK
          FYQ              LKG+L  ++S +Q+ F+PG  + D  ++ +E +H++ +KK
Subjt:  GAFYQH---------SRGLLKGMLDGIVSHNQNVFIPGLCVVDKAILGYECIHALKVKK

A0A2N9H577 Reverse transcriptase domain-containing protein4.4e-2540.38Show/hide
Query:  FHTQASRKR-SNTIRGLEDSDGVWQQEPDRVLGLIEEYFEGVFSSSNPTETDIEQVVARVSAIVTSEMNDRLLMPFQQDEILRALKQIHPNKALGPDGLS
        FH Q S+ R +N I GL D  GVW  +  +V  L  +YF+ +FSSSNPTE  +   +  +  +V++EMND LL  F  DE+L ALKQ++P KA  PDG+S
Subjt:  FHTQASRKR-SNTIRGLEDSDGVWQQEPDRVLGLIEEYFEGVFSSSNPTETDIEQVVARVSAIVTSEMNDRLLMPFQQDEILRALKQIHPNKALGPDGLS

Query:  GAFYQHSRGLL--KGMLDGIVSHNQNVFIPGLCVVDKAILGYECIHALKVKKHVGR
          FYQ    ++  + +L  ++S +QN F+PG  + D  ++ +E +H++  +K VG+
Subjt:  GAFYQHSRGLL--KGMLDGIVSHNQNVFIPGLCVVDKAILGYECIHALKVKKHVGR

A0A2N9HND5 CCHC-type domain-containing protein2.6e-2538.99Show/hide
Query:  FHTQAS-RKRSNTIRGLEDSDGVWQQEPDRVLGLIEEYFEGVFSSSNPTETDIEQVVARVSAIVTSEMNDRLLMPFQQDEILRALKQIHPNKALGPDGLS
        FH Q + R+++N I GL DSDG WQ +  +V  L  EYF  +F+SS P    I+  +  V  +VT +MND LL  F ++E+ +AL Q++P KA GPDG+S
Subjt:  FHTQAS-RKRSNTIRGLEDSDGVWQQEPDRVLGLIEEYFEGVFSSSNPTETDIEQVVARVSAIVTSEMNDRLLMPFQQDEILRALKQIHPNKALGPDGLS

Query:  GAFYQH---------SRGLLKGMLDGIVSHNQNVFIPGLCVVDKAILGYECIHALKVKK
          FYQ              LKG+L  ++S +Q+ F+PG  + D  ++ +E +H++ +KK
Subjt:  GAFYQH---------SRGLLKGMLDGIVSHNQNVFIPGLCVVDKAILGYECIHALKVKK

A0A6J1DAR4 uncharacterized protein LOC1110189542.0e-2541.42Show/hide
Query:  FHTQAS-RKRSNTIRGLEDSDGVWQQEPDRVLGLIEEYFEGVFSSSNPTETDIEQVVARVSAIVTSEMNDRLLMPFQQDEILRALKQIHPNKALGPDGLS
        FHT+AS R+R+N I+GL D  G W++   +V+G+IE YF  +FSSS P+ + IEQV   + A V+S  N  LL PF ++E++ AL QIHP+KALGPD  S
Subjt:  FHTQAS-RKRSNTIRGLEDSDGVWQQEPDRVLGLIEEYFEGVFSSSNPTETDIEQVVARVSAIVTSEMNDRLLMPFQQDEILRALKQIHPNKALGPDGLS

Query:  GAFYQH--------------------------SRGLLKGMLDGIVSHNQNVFIPGLCVVDKAILGYECI
         AFY++                          S  +LK  LD ++S +Q+ FIP   + D AILG+E +
Subjt:  GAFYQH--------------------------SRGLLKGMLDGIVSHNQNVFIPGLCVVDKAILGYECI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGGGACATGAATGCTCGTTCCACACCCAGGCCTCACGCAAGAGGAGCAATACGATTAGGGGTTTGGAGGATAGCGATGGGGTGTGGCAGCAGGAGCCAGATAGAGT
CCTGGGCCTGATTGAAGAATACTTTGAGGGTGTTTTCTCATCCTCAAACCCTACGGAGACGGATATTGAGCAGGTGGTGGCTCGGGTGTCAGCTATTGTTACAAGTGAGA
TGAATGACAGGTTATTGATGCCCTTTCAGCAAGATGAGATCTTACGAGCTCTAAAACAGATCCATCCTAATAAGGCTCTTGGGCCTGATGGACTGTCGGGGGCCTTCTAT
CAGCACTCTAGGGGGTTGCTGAAGGGTATGCTCGATGGAATTGTGTCCCATAACCAGAACGTGTTTATTCCTGGTCTTTGTGTAGTGGATAAAGCGATTCTGGGTTATGA
GTGCATACACGCTTTGAAAGTGAAGAAACATGTAGGACGGGATAGGCCTCACTCAAGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGGGGACATGAATGCTCGTTCCACACCCAGGCCTCACGCAAGAGGAGCAATACGATTAGGGGTTTGGAGGATAGCGATGGGGTGTGGCAGCAGGAGCCAGATAGAGT
CCTGGGCCTGATTGAAGAATACTTTGAGGGTGTTTTCTCATCCTCAAACCCTACGGAGACGGATATTGAGCAGGTGGTGGCTCGGGTGTCAGCTATTGTTACAAGTGAGA
TGAATGACAGGTTATTGATGCCCTTTCAGCAAGATGAGATCTTACGAGCTCTAAAACAGATCCATCCTAATAAGGCTCTTGGGCCTGATGGACTGTCGGGGGCCTTCTAT
CAGCACTCTAGGGGGTTGCTGAAGGGTATGCTCGATGGAATTGTGTCCCATAACCAGAACGTGTTTATTCCTGGTCTTTGTGTAGTGGATAAAGCGATTCTGGGTTATGA
GTGCATACACGCTTTGAAAGTGAAGAAACATGTAGGACGGGATAGGCCTCACTCAAGTTAG
Protein sequenceShow/hide protein sequence
MRGHECSFHTQASRKRSNTIRGLEDSDGVWQQEPDRVLGLIEEYFEGVFSSSNPTETDIEQVVARVSAIVTSEMNDRLLMPFQQDEILRALKQIHPNKALGPDGLSGAFY
QHSRGLLKGMLDGIVSHNQNVFIPGLCVVDKAILGYECIHALKVKKHVGRDRPHSS