; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0018810 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0018810
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr5:34828279..34828740
RNA-Seq ExpressionLag0018810
SyntenyLag0018810
Gene Ontology termsNA
InterPro domainsIPR005162 - Retrotransposon gag domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022147761.1 uncharacterized protein LOC111016619 [Momordica charantia]3.1e-1949.54Show/hide
Query:  RSISCFKDLARAFLAQFMGAREQRKPHINLLTVKQQLGESLRDYITRFNDEALQVEGYSEGATLVAITTGLEDERLLNSIGKSQPRTYAELVSRAQKYMS
        +SIS FK+LARAF+ QF G   + +P   LLT+KQ+  ESL+DY+ RFN E LQVEG ++   L+   +G++DE+L+ S GK    T++E  SRAQ YMS
Subjt:  RSISCFKDLARAFLAQFMGAREQRKPHINLLTVKQQLGESLRDYITRFNDEALQVEGYSEGATLVAITTGLEDERLLNSIGKSQPRTYAELVSRAQKYMS

Query:  AEELLKSKK
          EL+ SK+
Subjt:  AEELLKSKK

XP_022150035.1 uncharacterized protein LOC111018307 [Momordica charantia]9.7e-2151.35Show/hide
Query:  SISCFKDLARAFLAQFMGAREQRKPHINLLTVKQQLGESLRDYITRFNDEALQVEGYSEGATLVAITTGLEDERLLNSIGKSQPRTYAELVSRAQKYMSA
        SIS FK LA+AF+ QF+G R + +P   LLT+KQ+  ESL DY+ RFN+E LQVEG +   +L+A  + + DE L  S GK  P T++E +SRAQKYMSA
Subjt:  SISCFKDLARAFLAQFMGAREQRKPHINLLTVKQQLGESLRDYITRFNDEALQVEGYSEGATLVAITTGLEDERLLNSIGKSQPRTYAELVSRAQKYMSA

Query:  EELLKSKKTNE
         E   SK+  E
Subjt:  EELLKSKKTNE

XP_022158344.1 uncharacterized protein LOC111024851 [Momordica charantia]2.3e-2251.67Show/hide
Query:  SISCFKDLARAFLAQFMGAREQRKPHINLLTVKQQLGESLRDYITRFNDEALQVEGYSEGATLVAITTGLEDERLLNSIGKSQPRTYAELVSRAQKYMSA
        SIS FK+LA AF+ QF+G R + KP   LLT+KQ+  ESL++Y+ RFN+E LQVEG ++   L+A  +G++DERL+ S GK  P T+ E +SRAQKYMSA
Subjt:  SISCFKDLARAFLAQFMGAREQRKPHINLLTVKQQLGESLRDYITRFNDEALQVEGYSEGATLVAITTGLEDERLLNSIGKSQPRTYAELVSRAQKYMSA

Query:  EEL------LKSKKTNESTK
         EL      L+ ++ N STK
Subjt:  EEL------LKSKKTNESTK

XP_022158830.1 uncharacterized protein LOC111025293 [Momordica charantia]3.3e-2147.33Show/hide
Query:  SISCFKDLARAFLAQFMGAREQRKPHINLLTVKQQLGESLRDYITRFNDEALQVEGYSEGATLVAITTGLEDERLLNSIGKSQPRTYAELVSRAQKYMSA
        SIS FK LARAF+ QF+G R + +P   LLT+KQ+  ESLRDY+ RFN+E LQVEG ++  +L+A  +G+ DE L  S GK  P T++E +SRAQ+YMSA
Subjt:  SISCFKDLARAFLAQFMGAREQRKPHINLLTVKQQLGESLRDYITRFNDEALQVEGYSEGATLVAITTGLEDERLLNSIGKSQPRTYAELVSRAQKYMSA

Query:  EELLKSKKTNESTKDLLHLTTTVRRTKGSRP
         E   SK+  +  +     T   R   G +P
Subjt:  EELLKSKKTNESTKDLLHLTTTVRRTKGSRP

XP_022159109.1 uncharacterized protein LOC111025548 [Momordica charantia]1.1e-1945.04Show/hide
Query:  SISCFKDLARAFLAQFMGAREQRKPHINLLTVKQQLGESLRDYITRFNDEALQVEGYSEGATLVAITTGLEDERLLNSIGKSQPRTYAELVSRAQKYMSA
        SIS FK LARAF+ QF+G R + +P   LLT+KQ+  ESL DY+ RFN+E LQ+EG ++  +L+A  +G+ DE L  S  K  P T++E +SRAQ+YMSA
Subjt:  SISCFKDLARAFLAQFMGAREQRKPHINLLTVKQQLGESLRDYITRFNDEALQVEGYSEGATLVAITTGLEDERLLNSIGKSQPRTYAELVSRAQKYMSA

Query:  EELLKSKKTNESTKDLLHLTTTVRRTKGSRP
         E   SK+  +  +     T   R   G +P
Subjt:  EELLKSKKTNESTKDLLHLTTTVRRTKGSRP

TrEMBL top hitse value%identityAlignment
A0A6J1D3B7 uncharacterized protein LOC1110166191.5e-1949.54Show/hide
Query:  RSISCFKDLARAFLAQFMGAREQRKPHINLLTVKQQLGESLRDYITRFNDEALQVEGYSEGATLVAITTGLEDERLLNSIGKSQPRTYAELVSRAQKYMS
        +SIS FK+LARAF+ QF G   + +P   LLT+KQ+  ESL+DY+ RFN E LQVEG ++   L+   +G++DE+L+ S GK    T++E  SRAQ YMS
Subjt:  RSISCFKDLARAFLAQFMGAREQRKPHINLLTVKQQLGESLRDYITRFNDEALQVEGYSEGATLVAITTGLEDERLLNSIGKSQPRTYAELVSRAQKYMS

Query:  AEELLKSKK
          EL+ SK+
Subjt:  AEELLKSKK

A0A6J1D7D2 uncharacterized protein LOC1110183074.7e-2151.35Show/hide
Query:  SISCFKDLARAFLAQFMGAREQRKPHINLLTVKQQLGESLRDYITRFNDEALQVEGYSEGATLVAITTGLEDERLLNSIGKSQPRTYAELVSRAQKYMSA
        SIS FK LA+AF+ QF+G R + +P   LLT+KQ+  ESL DY+ RFN+E LQVEG +   +L+A  + + DE L  S GK  P T++E +SRAQKYMSA
Subjt:  SISCFKDLARAFLAQFMGAREQRKPHINLLTVKQQLGESLRDYITRFNDEALQVEGYSEGATLVAITTGLEDERLLNSIGKSQPRTYAELVSRAQKYMSA

Query:  EELLKSKKTNE
         E   SK+  E
Subjt:  EELLKSKKTNE

A0A6J1DWY0 uncharacterized protein LOC1110252931.6e-2147.33Show/hide
Query:  SISCFKDLARAFLAQFMGAREQRKPHINLLTVKQQLGESLRDYITRFNDEALQVEGYSEGATLVAITTGLEDERLLNSIGKSQPRTYAELVSRAQKYMSA
        SIS FK LARAF+ QF+G R + +P   LLT+KQ+  ESLRDY+ RFN+E LQVEG ++  +L+A  +G+ DE L  S GK  P T++E +SRAQ+YMSA
Subjt:  SISCFKDLARAFLAQFMGAREQRKPHINLLTVKQQLGESLRDYITRFNDEALQVEGYSEGATLVAITTGLEDERLLNSIGKSQPRTYAELVSRAQKYMSA

Query:  EELLKSKKTNESTKDLLHLTTTVRRTKGSRP
         E   SK+  +  +     T   R   G +P
Subjt:  EELLKSKKTNESTKDLLHLTTTVRRTKGSRP

A0A6J1DZ49 uncharacterized protein LOC1110248511.1e-2251.67Show/hide
Query:  SISCFKDLARAFLAQFMGAREQRKPHINLLTVKQQLGESLRDYITRFNDEALQVEGYSEGATLVAITTGLEDERLLNSIGKSQPRTYAELVSRAQKYMSA
        SIS FK+LA AF+ QF+G R + KP   LLT+KQ+  ESL++Y+ RFN+E LQVEG ++   L+A  +G++DERL+ S GK  P T+ E +SRAQKYMSA
Subjt:  SISCFKDLARAFLAQFMGAREQRKPHINLLTVKQQLGESLRDYITRFNDEALQVEGYSEGATLVAITTGLEDERLLNSIGKSQPRTYAELVSRAQKYMSA

Query:  EEL------LKSKKTNESTK
         EL      L+ ++ N STK
Subjt:  EEL------LKSKKTNESTK

A0A6J1E1E7 uncharacterized protein LOC1110255485.2e-2045.04Show/hide
Query:  SISCFKDLARAFLAQFMGAREQRKPHINLLTVKQQLGESLRDYITRFNDEALQVEGYSEGATLVAITTGLEDERLLNSIGKSQPRTYAELVSRAQKYMSA
        SIS FK LARAF+ QF+G R + +P   LLT+KQ+  ESL DY+ RFN+E LQ+EG ++  +L+A  +G+ DE L  S  K  P T++E +SRAQ+YMSA
Subjt:  SISCFKDLARAFLAQFMGAREQRKPHINLLTVKQQLGESLRDYITRFNDEALQVEGYSEGATLVAITTGLEDERLLNSIGKSQPRTYAELVSRAQKYMSA

Query:  EELLKSKKTNESTKDLLHLTTTVRRTKGSRP
         E   SK+  +  +     T   R   G +P
Subjt:  EELLKSKKTNESTKDLLHLTTTVRRTKGSRP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGATCCATCAGCTGCTTCAAGGATTTAGCCCGAGCGTTCCTTGCACAGTTCATGGGAGCCAGGGAACAACGCAAGCCTCACATCAACCTCTTAACAGTCAAACAGCA
GCTAGGTGAGAGCTTGCGTGATTACATAACACGTTTTAACGACGAAGCACTGCAGGTTGAGGGATACAGTGAGGGAGCAACCCTAGTAGCCATCACAACCGGGCTGGAGG
ACGAAAGACTACTCAACTCAATAGGTAAGAGCCAACCTCGAACCTATGCAGAGCTCGTCTCCCGAGCACAGAAATACATGAGCGCAGAGGAGTTGCTCAAGTCAAAGAAG
ACGAACGAGAGCACAAAAGATCTTCTTCATCTAACTACGACAGTAAGAAGGACAAAAGGCAGCAGACCGACGAGGGAGGCCGAGGCCGAGCAGACCATGGCCGAGGCCGA
CCAGACCAAGGAGACTACTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGATCCATCAGCTGCTTCAAGGATTTAGCCCGAGCGTTCCTTGCACAGTTCATGGGAGCCAGGGAACAACGCAAGCCTCACATCAACCTCTTAACAGTCAAACAGCA
GCTAGGTGAGAGCTTGCGTGATTACATAACACGTTTTAACGACGAAGCACTGCAGGTTGAGGGATACAGTGAGGGAGCAACCCTAGTAGCCATCACAACCGGGCTGGAGG
ACGAAAGACTACTCAACTCAATAGGTAAGAGCCAACCTCGAACCTATGCAGAGCTCGTCTCCCGAGCACAGAAATACATGAGCGCAGAGGAGTTGCTCAAGTCAAAGAAG
ACGAACGAGAGCACAAAAGATCTTCTTCATCTAACTACGACAGTAAGAAGGACAAAAGGCAGCAGACCGACGAGGGAGGCCGAGGCCGAGCAGACCATGGCCGAGGCCGA
CCAGACCAAGGAGACTACTTGA
Protein sequenceShow/hide protein sequence
MRSISCFKDLARAFLAQFMGAREQRKPHINLLTVKQQLGESLRDYITRFNDEALQVEGYSEGATLVAITTGLEDERLLNSIGKSQPRTYAELVSRAQKYMSAEELLKSKK
TNESTKDLLHLTTTVRRTKGSRPTREAEAEQTMAEADQTKETT