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Lag0018811 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0018811
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptiontranscription factor TCP9
Genome locationchr5:34830813..34831382
RNA-Seq ExpressionLag0018811
SyntenyLag0018811
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
GO:0043565 - sequence-specific DNA binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022141192.1 transcription factor TCP9 [Momordica charantia]2.2e-0479.41Show/hide
Query:  STSAASSTGTTHMLRDFSLEIYEKKELKFMGRGT
        +TSA SSTGTT MLRDFSL+IYEKKEL+FMGR +
Subjt:  STSAASSTGTTHMLRDFSLEIYEKKELKFMGRGT
TrEMBL top hitse value%identityAlignment
A0A6J1CJ67 transcription factor TCP91.0e-0479.41Show/hide
Query:  STSAASSTGTTHMLRDFSLEIYEKKELKFMGRGT
        +TSA SSTGTT MLRDFSL+IYEKKEL+FMGR +
Subjt:  STSAASSTGTTHMLRDFSLEIYEKKELKFMGRGT
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAAATTTTCGGAGCGCCGAGAAAAAGAAGACGAAAAGGCCCAAACTCCGAATCCAACGATTGCAACGATCAAACTTCCGTTTCCTCGGGGCTTACGCCGATTGCT
CCAATGGCGGCTTACGGTGTCGGCCTCGTTCCGTTCTGGGCCAACGCCGGCGGCGTCACAGAGCCGTTCTTCATGTGCCAGTTCTAGCCAGAGCTATTACAAACAGTTCA
AGTGGATTGGAAAGTGGATCTTCGCTGGCGATCGTTTCCCCGAGTTTGATTCCAGCAAGTGCCAGTGCTCGGCGAGCACGAGTGCAGCGTCTTCCACCGGTACAACTCAC
ATGTTGAGAGATTTTTCATTGGAAATTTACGAAAAGAAGGAGCTGAAATTCATGGGTCGGGGAACACTGCAAATTCTCAAACGCCATGTTCAAAACCTTGAAAATGACTT
TTTAACTCTCACTGTTTCATAA
mRNA sequenceShow/hide mRNA sequence
ATGGGGAAATTTTCGGAGCGCCGAGAAAAAGAAGACGAAAAGGCCCAAACTCCGAATCCAACGATTGCAACGATCAAACTTCCGTTTCCTCGGGGCTTACGCCGATTGCT
CCAATGGCGGCTTACGGTGTCGGCCTCGTTCCGTTCTGGGCCAACGCCGGCGGCGTCACAGAGCCGTTCTTCATGTGCCAGTTCTAGCCAGAGCTATTACAAACAGTTCA
AGTGGATTGGAAAGTGGATCTTCGCTGGCGATCGTTTCCCCGAGTTTGATTCCAGCAAGTGCCAGTGCTCGGCGAGCACGAGTGCAGCGTCTTCCACCGGTACAACTCAC
ATGTTGAGAGATTTTTCATTGGAAATTTACGAAAAGAAGGAGCTGAAATTCATGGGTCGGGGAACACTGCAAATTCTCAAACGCCATGTTCAAAACCTTGAAAATGACTT
TTTAACTCTCACTGTTTCATAA
Protein sequenceShow/hide protein sequence
MGKFSERREKEDEKAQTPNPTIATIKLPFPRGLRRLLQWRLTVSASFRSGPTPAASQSRSSCASSSQSYYKQFKWIGKWIFAGDRFPEFDSSKCQCSASTSAASSTGTTH
MLRDFSLEIYEKKELKFMGRGTLQILKRHVQNLENDFLTLTVS