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Lag0018812 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0018812
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptiontranscription factor bHLH66-like
Genome locationchr5:34839994..34840473
RNA-Seq ExpressionLag0018812
SyntenyLag0018812
Gene Ontology termsGO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000978 - RNA polymerase II proximal promoter sequence-specific DNA binding (molecular function)
GO:0000981 - DNA-binding transcription factor activity, RNA polymerase II-specific (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6586341.1 Transcription factor basic helix-loop-helix 66, partial [Cucurbita argyrosperma subsp. sororia]1.4e-5178.32Show/hide
Query:  MRLTNSFPDLHTHRRNRPPDTDASQLHHHQNHLQTSHLHPPPFSSDDFLDQILSSIPPPWELP-------ADLPPQPPP-PPNPDNTAFQIGDTTPAAKM
        MRLTNS PD H++RRNRPP+TDASQLHHHQNHLQ SHLHP  FSSDDFLDQILSSIP PWELP       ++LPPQPP  P NPDN AFQIGDTTPAAKM
Subjt:  MRLTNSFPDLHTHRRNRPPDTDASQLHHHQNHLQTSHLHPPPFSSDDFLDQILSSIPPPWELP-------ADLPPQPPP-PPNPDNTAFQIGDTTPAAKM

Query:  AMAMFHQQLLATAAVDSGLLPMPGNDIVEVEGSSSFKCPNPVL
        AMAM HQQLL TAA DS LL +PGND+VEVEGSSSFKCPNP++
Subjt:  AMAMFHQQLLATAAVDSGLLPMPGNDIVEVEGSSSFKCPNPVL

KAG7021187.1 Transcription factor bHLH66, partial [Cucurbita argyrosperma subsp. argyrosperma]5.5e-5179.43Show/hide
Query:  MRLTNSFPDLHTHRRNRPPDTDASQLHHHQNHLQTSHLHPPPFSSDDFLDQILSSIPPPWELP-------ADLPPQPPP-PPNPDNTAFQIGDTTPAAKM
        MRLTNS PD H++RRNRPP+TDASQLHHHQNHLQ SHLHP  FSSDDFLDQILSSIP PWELP       ++LPPQPP  P NPDN AFQIGDTTPAAKM
Subjt:  MRLTNSFPDLHTHRRNRPPDTDASQLHHHQNHLQTSHLHPPPFSSDDFLDQILSSIPPPWELP-------ADLPPQPPP-PPNPDNTAFQIGDTTPAAKM

Query:  AMAMFHQQLLATAAVDSGLLPMPGNDIVEVEGSSSFKCPNP
        AMAM HQQLL TAA DS LL +PGND+VEVEGSSSFKCPNP
Subjt:  AMAMFHQQLLATAAVDSGLLPMPGNDIVEVEGSSSFKCPNP

XP_022937836.1 transcription factor bHLH69-like [Cucurbita moschata]2.9e-5279.02Show/hide
Query:  MRLTNSFPDLHTHRRNRPPDTDASQLHHHQNHLQTSHLHPPPFSSDDFLDQILSSIPPPWELP-------ADLPPQPPP-PPNPDNTAFQIGDTTPAAKM
        MRLTNS PDLH++RRNRPP+TDASQLHHHQNHLQ SHLHP  FSSDDFLDQILSSIP PWELP       ++LPPQPP  P NPDN AFQIGDTTPAAKM
Subjt:  MRLTNSFPDLHTHRRNRPPDTDASQLHHHQNHLQTSHLHPPPFSSDDFLDQILSSIPPPWELP-------ADLPPQPPP-PPNPDNTAFQIGDTTPAAKM

Query:  AMAMFHQQLLATAAVDSGLLPMPGNDIVEVEGSSSFKCPNPVL
        AMAM HQQLL TAA DS LL +PGND+VEVEGSSSFKCPNP++
Subjt:  AMAMFHQQLLATAAVDSGLLPMPGNDIVEVEGSSSFKCPNPVL

XP_022965767.1 transcription factor bHLH69-like [Cucurbita maxima]8.7e-4975.52Show/hide
Query:  MRLTNSFPDLHTHRRNRPPDTDASQLHHHQNHLQTSHLHPPPFSSDDFLDQILSSIPPPWELP-------ADLPPQPPP-PPNPDNTAFQIGDTTPAAKM
        MRLTNS PD H++RRNRPP+TD SQ HHHQNHLQTSHLH   FSSDDFLDQILSSIP PWELP       ++LPPQPPP   NPDN AFQIGDTTPAAK+
Subjt:  MRLTNSFPDLHTHRRNRPPDTDASQLHHHQNHLQTSHLHPPPFSSDDFLDQILSSIPPPWELP-------ADLPPQPPP-PPNPDNTAFQIGDTTPAAKM

Query:  AMAMFHQQLLATAAVDSGLLPMPGNDIVEVEGSSSFKCPNPVL
        AMAM HQQLL TAA DS LL +PGND+VEVEGS SFKCPNP++
Subjt:  AMAMFHQQLLATAAVDSGLLPMPGNDIVEVEGSSSFKCPNPVL

XP_023538199.1 transcription factor bHLH69-like [Cucurbita pepo subsp. pepo]1.0e-4976.92Show/hide
Query:  MRLTNSFPDLHTHRRNRPPDTDASQLHHHQNHLQTSHLHPPPFSSDDFLDQILSSIPPPWELP-------ADLPPQPPP-PPNPDNTAFQIGDTTPAAKM
        MRLTNS PD H++RRNRPP+TDASQLHHHQNHLQTSHLHP  FSSDDFLDQILSSIP PWELP       ++LPPQPP    N DN AFQIGDTTPAAKM
Subjt:  MRLTNSFPDLHTHRRNRPPDTDASQLHHHQNHLQTSHLHPPPFSSDDFLDQILSSIPPPWELP-------ADLPPQPPP-PPNPDNTAFQIGDTTPAAKM

Query:  AMAMFHQQLLATAAVDSGLLPMPGNDIVEVEGSSSFKCPNPVL
        AMAM HQQLL TAA DS LL +PGND+VEVEGS SFKCPNP++
Subjt:  AMAMFHQQLLATAAVDSGLLPMPGNDIVEVEGSSSFKCPNPVL

TrEMBL top hitse value%identityAlignment
A0A0A0LFE4 BHLH domain-containing protein1.8e-4469.72Show/hide
Query:  MRLTNSFPDLHTHRRNRPPDTDASQLHHHQNHLQTSHLHPPPFSSDDFLDQILSSIPPPWELPADLPPQPPPPPNPDNTAFQIGDTTPAAKMAMAMFHQQ
        MRLTNS PDLHTHRRN P +TDASQLHHH + LQTS  HP  FSSDDFLDQILS++P PWELP  LP QP PP NPDN  F +GDTTPAAKMAM++  QQ
Subjt:  MRLTNSFPDLHTHRRNRPPDTDASQLHHHQNHLQTSHLHPPPFSSDDFLDQILSSIPPPWELPADLPPQPPPPPNPDNTAFQIGDTTPAAKMAMAMFHQQ

Query:  LL-------ATAAVDSGLLPMPGNDIVEVEG--SSSFKCPNP
        LL       A+A  D GLLPMPGN++VEV+G  SSSFKCPNP
Subjt:  LL-------ATAAVDSGLLPMPGNDIVEVEG--SSSFKCPNP

A0A6J1FBH4 transcription factor bHLH69-like1.4e-5279.02Show/hide
Query:  MRLTNSFPDLHTHRRNRPPDTDASQLHHHQNHLQTSHLHPPPFSSDDFLDQILSSIPPPWELP-------ADLPPQPPP-PPNPDNTAFQIGDTTPAAKM
        MRLTNS PDLH++RRNRPP+TDASQLHHHQNHLQ SHLHP  FSSDDFLDQILSSIP PWELP       ++LPPQPP  P NPDN AFQIGDTTPAAKM
Subjt:  MRLTNSFPDLHTHRRNRPPDTDASQLHHHQNHLQTSHLHPPPFSSDDFLDQILSSIPPPWELP-------ADLPPQPPP-PPNPDNTAFQIGDTTPAAKM

Query:  AMAMFHQQLLATAAVDSGLLPMPGNDIVEVEGSSSFKCPNPVL
        AMAM HQQLL TAA DS LL +PGND+VEVEGSSSFKCPNP++
Subjt:  AMAMFHQQLLATAAVDSGLLPMPGNDIVEVEGSSSFKCPNPVL

A0A6J1G4B7 transcription factor bHLH69-like2.6e-4670.55Show/hide
Query:  MRLTNSFPDLHTHRRNRPPDTDASQLHHHQNHLQTSHLHPPPFSSDDFLDQILSSIPPPWELP-------ADLPPQPPPPPNPDNTAFQIGDTTPAAKMA
        MRLTNS PDLH+HRRN PP+TD SQLHH   HLQTS  HPP FSSDDFLDQILS+ PPPWELP       ++LPPQPPPP NPDN AFQIGD TPA KMA
Subjt:  MRLTNSFPDLHTHRRNRPPDTDASQLHHHQNHLQTSHLHPPPFSSDDFLDQILSSIPPPWELP-------ADLPPQPPPPPNPDNTAFQIGDTTPAAKMA

Query:  MAMFHQQLL-----ATAAVDSGLLPMPGNDIVEVEGSSSFKCPNPV
        MA+  QQLL     AT + DS LLPM  ND+V+VEGSSSFKCPNP+
Subjt:  MAMFHQQLL-----ATAAVDSGLLPMPGNDIVEVEGSSSFKCPNPV

A0A6J1HL74 transcription factor bHLH69-like4.2e-4975.52Show/hide
Query:  MRLTNSFPDLHTHRRNRPPDTDASQLHHHQNHLQTSHLHPPPFSSDDFLDQILSSIPPPWELP-------ADLPPQPPP-PPNPDNTAFQIGDTTPAAKM
        MRLTNS PD H++RRNRPP+TD SQ HHHQNHLQTSHLH   FSSDDFLDQILSSIP PWELP       ++LPPQPPP   NPDN AFQIGDTTPAAK+
Subjt:  MRLTNSFPDLHTHRRNRPPDTDASQLHHHQNHLQTSHLHPPPFSSDDFLDQILSSIPPPWELP-------ADLPPQPPP-PPNPDNTAFQIGDTTPAAKM

Query:  AMAMFHQQLLATAAVDSGLLPMPGNDIVEVEGSSSFKCPNPVL
        AMAM HQQLL TAA DS LL +PGND+VEVEGS SFKCPNP++
Subjt:  AMAMFHQQLLATAAVDSGLLPMPGNDIVEVEGSSSFKCPNPVL

A0A6J1KH22 transcription factor bHLH69-like1.7e-4570.55Show/hide
Query:  MRLTNSFPDLHTHRRNRPPDTDASQLHHHQNHLQTSHLHPPPFSSDDFLDQILSSIPPPWELP-------ADLPPQPPPPPNPDNTAFQIGDTTPAAKMA
        MRLTNS PDLH+HRRN+PP+TD SQLHH   HLQTS  HPP FSSDDFLDQILS+ PPPWELP       ++LPPQPPPP NPDN AFQIGD TPA KMA
Subjt:  MRLTNSFPDLHTHRRNRPPDTDASQLHHHQNHLQTSHLHPPPFSSDDFLDQILSSIPPPWELP-------ADLPPQPPPPPNPDNTAFQIGDTTPAAKMA

Query:  MAMFHQQLL-----ATAAVDSGLLPMPGNDIVEVEGSSSFKCPNPV
        MA+  QQLL     AT +  S LLPM  ND+VEVEGSSSFKCPNP+
Subjt:  MAMFHQQLL-----ATAAVDSGLLPMPGNDIVEVEGSSSFKCPNPV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGACTCACCAACTCCTTCCCCGACCTCCATACCCACCGCCGTAACCGCCCGCCAGACACCGACGCCTCCCAACTCCACCACCACCAAAACCACCTCCAAACCTCCCA
TCTCCATCCTCCTCCTTTCTCCTCCGACGATTTCCTCGACCAAATCCTCTCCTCCATCCCCCCTCCCTGGGAACTCCCCGCCGACCTCCCTCCCCAACCACCGCCGCCGC
CGAATCCCGACAATACCGCCTTTCAGATCGGCGACACCACTCCAGCGGCCAAAATGGCCATGGCCATGTTTCACCAGCAGTTACTCGCCACTGCGGCTGTAGATTCTGGC
CTCCTTCCAATGCCTGGTAACGACATCGTCGAAGTCGAAGGCTCTTCGTCCTTCAAATGCCCTAATCCGGTACTCGAAATCGAACTCTCAAATCATTCAATTCGAAAATT
AGGTTTCGAATCAGTACCAAACCAATTCGATTTCCTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGACTCACCAACTCCTTCCCCGACCTCCATACCCACCGCCGTAACCGCCCGCCAGACACCGACGCCTCCCAACTCCACCACCACCAAAACCACCTCCAAACCTCCCA
TCTCCATCCTCCTCCTTTCTCCTCCGACGATTTCCTCGACCAAATCCTCTCCTCCATCCCCCCTCCCTGGGAACTCCCCGCCGACCTCCCTCCCCAACCACCGCCGCCGC
CGAATCCCGACAATACCGCCTTTCAGATCGGCGACACCACTCCAGCGGCCAAAATGGCCATGGCCATGTTTCACCAGCAGTTACTCGCCACTGCGGCTGTAGATTCTGGC
CTCCTTCCAATGCCTGGTAACGACATCGTCGAAGTCGAAGGCTCTTCGTCCTTCAAATGCCCTAATCCGGTACTCGAAATCGAACTCTCAAATCATTCAATTCGAAAATT
AGGTTTCGAATCAGTACCAAACCAATTCGATTTCCTGTAG
Protein sequenceShow/hide protein sequence
MRLTNSFPDLHTHRRNRPPDTDASQLHHHQNHLQTSHLHPPPFSSDDFLDQILSSIPPPWELPADLPPQPPPPPNPDNTAFQIGDTTPAAKMAMAMFHQQLLATAAVDSG
LLPMPGNDIVEVEGSSSFKCPNPVLEIELSNHSIRKLGFESVPNQFDFL