; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0018852 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0018852
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr5:35426511..35428035
RNA-Seq ExpressionLag0018852
SyntenyLag0018852
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAB4262994.1 unnamed protein product [Prunus armeniaca]2.8e-2129.66Show/hide
Query:  SRLARIIRGRYCPSSSILEAIDRRNSSYFWKGFVWGLDLLKKGLRKILGNGQSINLFSDPWLPRPSTFKILTPTPTCGPVMVFYFITPTFQWDIPKLDRY
        S +ARI R RY PS+  LEA    N S+ W+   WG +LL KGLR  +GNG+SI ++++ WLP PS FKI++        +V    T + QW++P L   
Subjt:  SRLARIIRGRYCPSSSILEAIDRRNSSYFWKGFVWGLDLLKKGLRKILGNGQSINLFSDPWLPRPSTFKILTPTPTCGPVMVFYFITPTFQWDIPKLDRY

Query:  LSAADVAEIIPLP-ISGGALNIWIWHYDHHGMYS-----------KEL---ETTDHALFRCKRARKVWALITPSHF------------TGHNL-----NM
            +V  I+ +P +S  + +  IWHY+ +GMYS           K++   E++       +  +K+WAL  P+               G N+       
Subjt:  LSAADVAEIIPLP-ISGGALNIWIWHYDHHGMYS-----------KEL---ETTDHALFRCKRARKVWALITPSHF------------TGHNL-----NM

Query:  DIQDRWLCMSVQPWVAQLDLICVGAWAIWNDRNNVI
          ++ W  + +     +  L     W +WN R+++I
Subjt:  DIQDRWLCMSVQPWVAQLDLICVGAWAIWNDRNNVI

XP_008359713.2 uncharacterized protein LOC103423419 [Malus domestica]1.7e-2132.75Show/hide
Query:  LSRLARIIRGRYCPSSSILEAIDRRNSSYFWKGFVWGLDLLKKGLRKILGNGQSINLFSDPWLPRPSTFKILTPTPTCGPVMVFYFITP-TFQWDIPKLD
        LS LA ++  +Y P  S  EA+  +N+S+ WKG      +LK GLR  +GNG+SIN+  DPWLP+PST+K++ P P     MV   I P T  W    ++
Subjt:  LSRLARIIRGRYCPSSSILEAIDRRNSSYFWKGFVWGLDLLKKGLRKILGNGQSINLFSDPWLPRPSTFKILTPTPTCGPVMVFYFITP-TFQWDIPKLD

Query:  RYLSAADVAEIIPLPIS-GGALNIWIWHYDHHGMYSKE--LETTDHALFRCKRA---RKVWALITPSHFTGHNL-NMDIQDRW--LCMSVQPWVAQLDL-
              DV  I+ +P+S  G  +  +WHY  + ++S +   +   +A F        R V+   +P H   H L   D  + W   C  V+      D+ 
Subjt:  RYLSAADVAEIIPLPIS-GGALNIWIWHYDHHGMYSKE--LETTDHALFRCKRA---RKVWALITPSHFTGHNL-NMDIQDRW--LCMSVQPWVAQLDL-

Query:  --ICVGAWAIWNDRNNVIHN--RQVPIDI
             G W +W +RN+VI     + P+DI
Subjt:  --ICVGAWAIWNDRNNVIHN--RQVPIDI

XP_022131662.1 uncharacterized protein LOC111004787 [Momordica charantia]1.6e-2442.42Show/hide
Query:  LARIIRGRYCPSSSILEAIDRRNSSYFWKGFVWGLDLLKKGLRKILGNGQSINLFSDPWLPRPSTFKILTPTPTCGPVMVFYFITPTFQWDIPKLDRYLS
        ++R+++ +Y   S +L+A   RN SYFWKGF+WG DLL KGLR  +GNG +IN+FSDPW+PRP +F+ +T       V V   I P  QWD+  +     
Subjt:  LARIIRGRYCPSSSILEAIDRRNSSYFWKGFVWGLDLLKKGLRKILGNGQSINLFSDPWLPRPSTFKILTPTPTCGPVMVFYFITPTFQWDIPKLDRYLS

Query:  AADVAEIIPLPISG-GALNIWIWHYDHHGMYS
          D   I+ +P+S   +++ WIWH+D  G Y+
Subjt:  AADVAEIIPLPISG-GALNIWIWHYDHHGMYS

XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]6.7e-3129.97Show/hide
Query:  LARIIRGRYCPSSSILEAIDRRNSSYFWKGFVWGLDLLKKGLRKILGNGQSINLFSDPWLPRPSTFKILTPTPTCGPVMVFYFITPTFQWDIPKLDRYLS
        ++++++ +Y   +S+L+A +   SSYFWKGF+WG DLL KGLR  +GNG +I  FSDPWLPRP+TFK L          V  FIT    WD+  +     
Subjt:  LARIIRGRYCPSSSILEAIDRRNSSYFWKGFVWGLDLLKKGLRKILGNGQSINLFSDPWLPRPSTFKILTPTPTCGPVMVFYFITPTFQWDIPKLDRYLS

Query:  AADVAEIIPLPISGGAL-NIWIWHYDHHGMYS--------------------------------------------------------------------
          D   I+ +PIS   L + W+WHYD  G YS                                                                    
Subjt:  AADVAEIIPLPISGGAL-NIWIWHYDHHGMYS--------------------------------------------------------------------

Query:  ----KELETTDHALFRCKRARKVWALITP-SHFTGHNLNMDIQDRWLCMSVQPWVAQLDLICVGAWAIWNDRNNVIHNRQV-PIDIQ
               E+  HA F CKRAR++W  + P         N+   + W  ++ Q     L+L  +  W IWNDRN++IH +QV P++ +
Subjt:  ----KELETTDHALFRCKRARKVWALITP-SHFTGHNLNMDIQDRWLCMSVQPWVAQLDLICVGAWAIWNDRNNVIHNRQV-PIDIQ

XP_024950112.1 uncharacterized protein LOC112496847 [Citrus sinensis]1.1e-2226.17Show/hide
Query:  SRLARIIRGRYCPSSSILEAIDRRNSSYFWKGFVWGLDLLKKGLRKILGNGQSINLFSDPWLPRPSTFKILTPTPTCGPVMVFYFITPTFQWDIPKLDRY
        S ++R+++ RY  +SS L A    N+SY W+  +WG  ++KKG+R  +GNG+ I +FSD WLPRP TF+ + P       +V   I    QWD  KL ++
Subjt:  SRLARIIRGRYCPSSSILEAIDRRNSSYFWKGFVWGLDLLKKGLRKILGNGQSINLFSDPWLPRPSTFKILTPTPTCGPVMVFYFITPTFQWDIPKLDRY

Query:  LSAADVAEIIPLPI-SGGALNIWIWHYDHHGMYSKE----------------------------------------------------------------
            D AEI+ +P+ +  A +  +WHYD  G YS +                                                                
Subjt:  LSAADVAEIIPLPI-SGGALNIWIWHYDHHGMYSKE----------------------------------------------------------------

Query:  --------LETTDHALFRCKRARKVWALITPSHFTGHNLNMDIQDRWLC---MSVQPWVAQLDLICVGAWAIWNDRNNVIHN------------------
                +ET  HAL  CK ARK+W     S F+   L  + QD +     M+ +   + L+L+    W+ W  RN  I +                  
Subjt:  --------LETTDHALFRCKRARKVWALITPSHFTGHNLNMDIQDRWLC---MSVQPWVAQLDLICVGAWAIWNDRNNVIHN------------------

Query:  --------RQVPIDIQV---------------VIHVDAAYYPISRQAEVGVVIRDSNSQLIAA
                +Q  I I +                ++VDAA+   +  A VG VIRDSN +++AA
Subjt:  --------RQVPIDIQV---------------VIHVDAAYYPISRQAEVGVVIRDSNSQLIAA

TrEMBL top hitse value%identityAlignment
A0A6J1BRN0 uncharacterized protein LOC1110047877.7e-2542.42Show/hide
Query:  LARIIRGRYCPSSSILEAIDRRNSSYFWKGFVWGLDLLKKGLRKILGNGQSINLFSDPWLPRPSTFKILTPTPTCGPVMVFYFITPTFQWDIPKLDRYLS
        ++R+++ +Y   S +L+A   RN SYFWKGF+WG DLL KGLR  +GNG +IN+FSDPW+PRP +F+ +T       V V   I P  QWD+  +     
Subjt:  LARIIRGRYCPSSSILEAIDRRNSSYFWKGFVWGLDLLKKGLRKILGNGQSINLFSDPWLPRPSTFKILTPTPTCGPVMVFYFITPTFQWDIPKLDRYLS

Query:  AADVAEIIPLPISG-GALNIWIWHYDHHGMYS
          D   I+ +P+S   +++ WIWH+D  G Y+
Subjt:  AADVAEIIPLPISG-GALNIWIWHYDHHGMYS

A0A6J1DX30 uncharacterized protein LOC1110248743.2e-3129.97Show/hide
Query:  LARIIRGRYCPSSSILEAIDRRNSSYFWKGFVWGLDLLKKGLRKILGNGQSINLFSDPWLPRPSTFKILTPTPTCGPVMVFYFITPTFQWDIPKLDRYLS
        ++++++ +Y   +S+L+A +   SSYFWKGF+WG DLL KGLR  +GNG +I  FSDPWLPRP+TFK L          V  FIT    WD+  +     
Subjt:  LARIIRGRYCPSSSILEAIDRRNSSYFWKGFVWGLDLLKKGLRKILGNGQSINLFSDPWLPRPSTFKILTPTPTCGPVMVFYFITPTFQWDIPKLDRYLS

Query:  AADVAEIIPLPISGGAL-NIWIWHYDHHGMYS--------------------------------------------------------------------
          D   I+ +PIS   L + W+WHYD  G YS                                                                    
Subjt:  AADVAEIIPLPISGGAL-NIWIWHYDHHGMYS--------------------------------------------------------------------

Query:  ----KELETTDHALFRCKRARKVWALITP-SHFTGHNLNMDIQDRWLCMSVQPWVAQLDLICVGAWAIWNDRNNVIHNRQV-PIDIQ
               E+  HA F CKRAR++W  + P         N+   + W  ++ Q     L+L  +  W IWNDRN++IH +QV P++ +
Subjt:  ----KELETTDHALFRCKRARKVWALITP-SHFTGHNLNMDIQDRWLCMSVQPWVAQLDLICVGAWAIWNDRNNVIHNRQV-PIDIQ

A0A803NGI9 Uncharacterized protein4.0e-2930.27Show/hide
Query:  SRLARIIRGRYCPSSSILEAIDRRNSSYFWKGFVWGLDLLKKGLRKILGNGQSINLFSDPWLPRPSTFKILTPTPTC----GPVMVFYFITPTFQWDIPK
        S L+R+++GRY   +  L+A     SS  W+G  WG DLL KGLR  +G+G S+   SDPW+PR S F     TP C       +V Y+IT   +W++P 
Subjt:  SRLARIIRGRYCPSSSILEAIDRRNSSYFWKGFVWGLDLLKKGLRKILGNGQSINLFSDPWLPRPSTFKILTPTPTC----GPVMVFYFITPTFQWDIPK

Query:  LDRYLSAADVAEIIPLPISGGAL-NIWIWHYDHHGMY--------------------------------------------SKELETTDHALFRCKRARK
        L R  SA DV  I+ +P+S  ++ + WIWH+ +   Y                                            S   E+ +HALF CK A+K
Subjt:  LDRYLSAADVAEIIPLPISGGAL-NIWIWHYDHHGMY--------------------------------------------SKELETTDHALFRCKRARK

Query:  VWALITPSHFTGHNLNMDIQDRW------LCMSVQPWVAQLDLICVGAWAIWNDRNNVIHNRQVPIDIQVVIHVDAAYYPISRQAEVGVVIRDS
        VW +       G +LN D+  R       + +S     ++++ +    W +WNDRNN IH +      Q+     A +    +Q+     IRDS
Subjt:  VWALITPSHFTGHNLNMDIQDRW------LCMSVQPWVAQLDLICVGAWAIWNDRNNVIHNRQVPIDIQVVIHVDAAYYPISRQAEVGVVIRDS

A0A803NXV2 Uncharacterized protein1.8e-2643.28Show/hide
Query:  SRLARIIRGRYCPSSSILEAIDRRNSSYFWKGFVWGLDLLKKGLRKILGNGQSINLFSDPWLPRPSTFKILTPTPTCGPVMVFYFITPTFQWDIPKLDRY
        S  AR+++ +Y P++SIL+A DR+ SS+ W   +WGL LL  GLRK++G+GQS++ F DPW+PRP +F+ ++P P  G VMV   I     WD+  L +Y
Subjt:  SRLARIIRGRYCPSSSILEAIDRRNSSYFWKGFVWGLDLLKKGLRKILGNGQSINLFSDPWLPRPSTFKILTPTPTCGPVMVFYFITPTFQWDIPKLDRY

Query:  LSAADVAEIIPLPISGGAL-NIWIWHYDHHGMYS
          + D+  I+ +P+ GG   + W WHY+ +G YS
Subjt:  LSAADVAEIIPLPISGGAL-NIWIWHYDHHGMYS

A0A803Q8J4 Uncharacterized protein2.3e-2428.09Show/hide
Query:  SRLARIIRGRYCPSSSILEAIDRRNSSYFWKGFVWGLDLLKKGLRKILGNGQSINLFSDPWLPRPSTFKILTPTPTCGPVMVFYFITPTFQWDIPKLDRY
        S L R+++GRY P +  L A     SS  W+G  WG +LLKKG+RK +GNG SI+  +DPW+P    F  +  +     V+  Y ITP  +W+  KL   
Subjt:  SRLARIIRGRYCPSSSILEAIDRRNSSYFWKGFVWGLDLLKKGLRKILGNGQSINLFSDPWLPRPSTFKILTPTPTCGPVMVFYFITPTFQWDIPKLDRY

Query:  LSAADVAEIIPLPISGGA-LNIWIWH-----YDHHGMY------------------------------------------------------SKEL----
         S+ DV  I+ LP+S  A  + WIWH     Y+    Y                                                       K L    
Subjt:  LSAADVAEIIPLPISGGA-LNIWIWH-----YDHHGMY------------------------------------------------------SKEL----

Query:  --------ETTDHALFRCKRARKVWALITPSHFTGHN---LNMDIQDRWLCMSVQPWVAQLDLICVGAWAIWNDRNNVIHNR--QVPIDIQ---------
                E+  HALF CK AR VW +   + FT +N   ++M+I+D    +S     ++L+ I    W+IW+DRNNVIH +  Q P  I          
Subjt:  --------ETTDHALFRCKRARKVWALITPSHFTGHN---LNMDIQDRWLCMSVQPWVAQLDLICVGAWAIWNDRNNVIHNR--QVPIDIQ---------

Query:  --------------------------------VVIHVDAAYYPISRQAEVGVVIRDSNSQLIAAMAG-----TLDPESEASMDSWSLK
                                        + ++VDAA+     +   G +IRDSN  + AAM+       L  E EA    +SLK
Subjt:  --------------------------------VVIHVDAAYYPISRQAEVGVVIRDSNSQLIAAMAG-----TLDPESEASMDSWSLK

SwissProt top hitse value%identityAlignment
P93295 Uncharacterized mitochondrial protein AtMg003101.3e-0535Show/hide
Query:  LARIIRGRYCPSSSILEAIDRRNSSYFWKGFVWGLDLLKKGLRKILGNGQSINLFSDPWL
        L+R++R RY P SS++E       SY W+  + G +LL +GL + +G+G    ++ D W+
Subjt:  LARIIRGRYCPSSSILEAIDRRNSSYFWKGFVWGLDLLKKGLRKILGNGQSINLFSDPWL

Arabidopsis top hitse value%identityAlignment
AT3G09510.1 Ribonuclease H-like superfamily protein2.9e-0829.41Show/hide
Query:  IRGRYCPSSSILEAIDRRNSSYFWKGFVWGLDLLKKGLRKILGNGQSINL----FSDPWLPRP----STFKILTPTPTCGPVMVFYFITPTFQWDIPKLD
        ++ RY    SIL+A  R+  SY W   + G+ LLKKG R ++G+GQ+I +      D   PRP     T+K +T          +YF      WD  K+ 
Subjt:  IRGRYCPSSSILEAIDRRNSSYFWKGFVWGLDLLKKGLRKILGNGQSINL----FSDPWLPRP----STFKILTPTPTCGPVMVFYFITPTFQWDIPKLD

Query:  RYLSAADVAEIIPLPISGGAL-NIWIWHYDHHGMYS
        +++  +D   I  + ++     +  IW+Y+  G Y+
Subjt:  RYLSAADVAEIIPLPISGGAL-NIWIWHYDHHGMYS

AT4G29090.1 Ribonuclease H-like superfamily protein2.0e-0432.39Show/hide
Query:  MLSFQESFLSRLARIIRGRYCPSSSILEAIDRRNSSYFWKGFVWGLDLLKKGLRKILGNGQSINLFSDPWL
        MLS  ES    +A++ + RY   S  L A      S+ WK      ++L++G R ++GNG+ I ++   WL
Subjt:  MLSFQESFLSRLARIIRGRYCPSSSILEAIDRRNSSYFWKGFVWGLDLLKKGLRKILGNGQSINLFSDPWL

ATMG00310.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein9.4e-0735Show/hide
Query:  LARIIRGRYCPSSSILEAIDRRNSSYFWKGFVWGLDLLKKGLRKILGNGQSINLFSDPWL
        L+R++R RY P SS++E       SY W+  + G +LL +GL + +G+G    ++ D W+
Subjt:  LARIIRGRYCPSSSILEAIDRRNSSYFWKGFVWGLDLLKKGLRKILGNGQSINLFSDPWL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGAGTTTTCAAGAATCCTTCTTATCGCGTTTGGCCAGAATCATTCGAGGTCGATATTGCCCTTCATCTTCTATTCTGGAAGCGATAGATAGACGTAATTCTTCCTA
TTTTTGGAAGGGCTTTGTTTGGGGCTTAGATTTGTTAAAGAAGGGGTTGCGGAAAATTTTGGGGAATGGTCAATCGATCAATTTGTTCTCTGATCCCTGGTTACCCAGAC
CATCAACTTTTAAAATTTTGACCCCGACCCCGACGTGTGGGCCAGTGATGGTTTTTTATTTTATTACCCCAACATTCCAATGGGATATCCCCAAATTGGATCGATATTTG
AGTGCAGCTGATGTGGCTGAAATCATTCCTTTACCGATCAGTGGAGGCGCTCTGAATATATGGATTTGGCACTATGATCATCATGGTATGTATTCTAAAGAGCTAGAGAC
GACTGATCATGCGCTTTTTAGGTGTAAAAGAGCGAGGAAGGTTTGGGCACTCATAACACCATCTCATTTTACTGGTCACAACTTAAACATGGATATTCAGGATCGGTGGC
TTTGTATGAGTGTCCAGCCATGGGTAGCTCAACTTGATCTTATATGTGTCGGGGCTTGGGCTATTTGGAATGATAGGAACAACGTCATCCACAATAGGCAAGTGCCGATT
GATATTCAAGTGGTTATTCATGTGGATGCTGCCTACTATCCTATTAGCCGTCAAGCAGAGGTTGGTGTGGTGATTCGGGATTCCAATAGCCAATTGATAGCTGCCATGGC
TGGAACGCTTGATCCCGAGTCTGAAGCTTCAATGGATTCTTGGAGCTTGAAGTCTTCTAGTCTTGAAGGAGTCTTCGGTCTTCAAGAAGTGTTGATGTCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTGAGTTTTCAAGAATCCTTCTTATCGCGTTTGGCCAGAATCATTCGAGGTCGATATTGCCCTTCATCTTCTATTCTGGAAGCGATAGATAGACGTAATTCTTCCTA
TTTTTGGAAGGGCTTTGTTTGGGGCTTAGATTTGTTAAAGAAGGGGTTGCGGAAAATTTTGGGGAATGGTCAATCGATCAATTTGTTCTCTGATCCCTGGTTACCCAGAC
CATCAACTTTTAAAATTTTGACCCCGACCCCGACGTGTGGGCCAGTGATGGTTTTTTATTTTATTACCCCAACATTCCAATGGGATATCCCCAAATTGGATCGATATTTG
AGTGCAGCTGATGTGGCTGAAATCATTCCTTTACCGATCAGTGGAGGCGCTCTGAATATATGGATTTGGCACTATGATCATCATGGTATGTATTCTAAAGAGCTAGAGAC
GACTGATCATGCGCTTTTTAGGTGTAAAAGAGCGAGGAAGGTTTGGGCACTCATAACACCATCTCATTTTACTGGTCACAACTTAAACATGGATATTCAGGATCGGTGGC
TTTGTATGAGTGTCCAGCCATGGGTAGCTCAACTTGATCTTATATGTGTCGGGGCTTGGGCTATTTGGAATGATAGGAACAACGTCATCCACAATAGGCAAGTGCCGATT
GATATTCAAGTGGTTATTCATGTGGATGCTGCCTACTATCCTATTAGCCGTCAAGCAGAGGTTGGTGTGGTGATTCGGGATTCCAATAGCCAATTGATAGCTGCCATGGC
TGGAACGCTTGATCCCGAGTCTGAAGCTTCAATGGATTCTTGGAGCTTGAAGTCTTCTAGTCTTGAAGGAGTCTTCGGTCTTCAAGAAGTGTTGATGTCCTGA
Protein sequenceShow/hide protein sequence
MLSFQESFLSRLARIIRGRYCPSSSILEAIDRRNSSYFWKGFVWGLDLLKKGLRKILGNGQSINLFSDPWLPRPSTFKILTPTPTCGPVMVFYFITPTFQWDIPKLDRYL
SAADVAEIIPLPISGGALNIWIWHYDHHGMYSKELETTDHALFRCKRARKVWALITPSHFTGHNLNMDIQDRWLCMSVQPWVAQLDLICVGAWAIWNDRNNVIHNRQVPI
DIQVVIHVDAAYYPISRQAEVGVVIRDSNSQLIAAMAGTLDPESEASMDSWSLKSSSLEGVFGLQEVLMS