; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0018858 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0018858
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr5:35478642..35479226
RNA-Seq ExpressionLag0018858
SyntenyLag0018858
Gene Ontology termsNA
InterPro domainsIPR036691 - Endonuclease/exonuclease/phosphatase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_012851712.1 PREDICTED: uncharacterized protein LOC105971405 [Erythranthe guttata]1.7e-1736.64Show/hide
Query:  DLNAITHAQENDGGGDFERSQSLNFLNVLNDCALRDLGFKGNRFTWQNNQPGIAFIRKRLDRCIGNVDFLNLYHSVTINHLGFLSSDHRVLEAVLKESED
        D N I    E  GG     +    F N L DC+L DLGF+G+ FTW NN+     +R RLDRC  N  +++L+   ++ HL +  SDH  ++A+L++S++
Subjt:  DLNAITHAQENDGGGDFERSQSLNFLNVLNDCALRDLGFKGNRFTWQNNQPGIAFIRKRLDRCIGNVDFLNLYHSVTINHLGFLSSDHRVLEAVLKESED

Query:  LRHAGNKKPHFKFEEAWTLHEDCISAIQTGW
        ++    K+P F+FE  W   +DC   I   W
Subjt:  LRHAGNKKPHFKFEEAWTLHEDCISAIQTGW

XP_012857846.1 PREDICTED: uncharacterized protein LOC105977118 [Erythranthe guttata]1.3e-1736.64Show/hide
Query:  DLNAITHAQENDGGGDFERSQSLNFLNVLNDCALRDLGFKGNRFTWQNNQPGIAFIRKRLDRCIGNVDFLNLYHSVTINHLGFLSSDHRVLEAVLKESED
        D N I    E  GG     +    F N L DC+L DLGF+G+ FTW NN+     +R RLDRC  N  +++L+   ++ HL +  SDH  ++A+L++S++
Subjt:  DLNAITHAQENDGGGDFERSQSLNFLNVLNDCALRDLGFKGNRFTWQNNQPGIAFIRKRLDRCIGNVDFLNLYHSVTINHLGFLSSDHRVLEAVLKESED

Query:  LRHAGNKKPHFKFEEAWTLHEDCISAIQTGW
        ++    K+P F+FE  W   +DC   I   W
Subjt:  LRHAGNKKPHFKFEEAWTLHEDCISAIQTGW

XP_042939444.1 uncharacterized protein LOC122274474 [Carya illinoinensis]2.6e-1838.93Show/hide
Query:  DLNAITHAQENDGGGDFERSQSLNFLNVLNDCALRDLGFKGNRFTWQNNQPGIAFIRKRLDRCIGNVDFLNLYHSVTINHLGFLSSDHRVLEAVLKESED
        D N ITH  E  G  +    Q + F N L+ C L DLGF G++FTW NN+ G  F ++RLDR  GN  ++NL+ + ++ HL    SDH+   A+L ++ D
Subjt:  DLNAITHAQENDGGGDFERSQSLNFLNVLNDCALRDLGFKGNRFTWQNNQPGIAFIRKRLDRCIGNVDFLNLYHSVTINHLGFLSSDHRVLEAVLKESED

Query:  LRHAGNKKPHFKFEEAWTLHEDCISAIQTGW
            G K+  F+FE AW+   +C   I+  W
Subjt:  LRHAGNKKPHFKFEEAWTLHEDCISAIQTGW

XP_042939448.1 uncharacterized protein LOC122274477 [Carya illinoinensis]3.6e-2041.22Show/hide
Query:  DLNAITHAQENDGGGDFERSQSLNFLNVLNDCALRDLGFKGNRFTWQNNQPGIAFIRKRLDRCIGNVDFLNLYHSVTINHLGFLSSDHRVLEAVLKESED
        D N ITH +E  G  +    Q + F N L+ C L DLGF G+RFTW NN+ G  F ++RLDR  GN  +LNL+ +  ++HL    SDH+    +L ++ D
Subjt:  DLNAITHAQENDGGGDFERSQSLNFLNVLNDCALRDLGFKGNRFTWQNNQPGIAFIRKRLDRCIGNVDFLNLYHSVTINHLGFLSSDHRVLEAVLKESED

Query:  LRHAGNKKPHFKFEEAWTLHEDCISAIQTGW
            G KK  F+ E AW+  EDC   I+  W
Subjt:  LRHAGNKKPHFKFEEAWTLHEDCISAIQTGW

XP_042990668.1 uncharacterized protein LOC122317666 [Carya illinoinensis]5.1e-1940.46Show/hide
Query:  DLNAITHAQENDGGGDFERSQSLNFLNVLNDCALRDLGFKGNRFTWQNNQPGIAFIRKRLDRCIGNVDFLNLYHSVTINHLGFLSSDHRVLEAVLKESED
        D N ITH  E  G  +    Q + F N L+ C L DLGF G++FTW NN+ G  F ++RLDR  GN  ++ L+ + T++HL    SDH+   A+L ++ D
Subjt:  DLNAITHAQENDGGGDFERSQSLNFLNVLNDCALRDLGFKGNRFTWQNNQPGIAFIRKRLDRCIGNVDFLNLYHSVTINHLGFLSSDHRVLEAVLKESED

Query:  LRHAGNKKPHFKFEEAWTLHEDCISAIQTGW
        L   G K   F+FE AWT   +C   I+  W
Subjt:  LRHAGNKKPHFKFEEAWTLHEDCISAIQTGW

TrEMBL top hitse value%identityAlignment
A0A2N9G9R7 Uncharacterized protein1.2e-1842.75Show/hide
Query:  DLNAITHAQENDGGGDFERSQSLNFLNVLNDCALRDLGFKGNRFTWQNNQPGIAFIRKRLDRCIGNVDFLNLYHSVTINHLGFLSSDHRVLEAVLKESED
        D N I    E  GG  F  S      N L++C L DLGFKGN FTW N + G   I++RLDR + NV++  L+   TI HL  LSS+H  L  V+   ED
Subjt:  DLNAITHAQENDGGGDFERSQSLNFLNVLNDCALRDLGFKGNRFTWQNNQPGIAFIRKRLDRCIGNVDFLNLYHSVTINHLGFLSSDHRVLEAVLKESED

Query:  LRHAGNKKPHFKFEEAWTLHEDCISAIQTGW
        +      KP F+FEEAWT   +C   I+  W
Subjt:  LRHAGNKKPHFKFEEAWTLHEDCISAIQTGW

A0A2N9GJA3 Uncharacterized protein5.6e-1942.75Show/hide
Query:  DLNAITHAQENDGGGDFERSQSLNFLNVLNDCALRDLGFKGNRFTWQNNQPGIAFIRKRLDRCIGNVDFLNLYHSVTINHLGFLSSDHRVLEAVLKESED
        D N I    E  GG  F  S      N L++C+L DLGFKGN FTW N + G   I++RLDR + N ++  L+   TI HL  LSSDH  L  V+   ED
Subjt:  DLNAITHAQENDGGGDFERSQSLNFLNVLNDCALRDLGFKGNRFTWQNNQPGIAFIRKRLDRCIGNVDFLNLYHSVTINHLGFLSSDHRVLEAVLKESED

Query:  LRHAGNKKPHFKFEEAWTLHEDCISAIQTGW
        +      KP F+FEEAWT   +C   I+  W
Subjt:  LRHAGNKKPHFKFEEAWTLHEDCISAIQTGW

A0A2N9H936 Uncharacterized protein1.4e-1739.39Show/hide
Query:  DLNAITHAQENDGGGDFERSQSLNFLNVLNDCALRDLGFKGNRFTWQNNQPGIAFIRKRLDRCIGNVDFLNLYHSVTINHLGFLSSDHRVLEAVLKESED
        D N I  A+E  G      SQ   F  V++DC   DLGF G+ +TW N Q G A++ +RLDRC+   D++  + +  +NHL  + SDHR L   L  S  
Subjt:  DLNAITHAQENDGGGDFERSQSLNFLNVLNDCALRDLGFKGNRFTWQNNQPGIAFIRKRLDRCIGNVDFLNLYHSVTINHLGFLSSDHRVLEAVLKESED

Query:  LRHAGNKKPHFKFEEAWTLHEDCISAIQTGWE
         R    ++  F+FEE WT+H+ C   I+T WE
Subjt:  LRHAGNKKPHFKFEEAWTLHEDCISAIQTGWE

A0A2N9HN58 Uncharacterized protein5.6e-1942.75Show/hide
Query:  DLNAITHAQENDGGGDFERSQSLNFLNVLNDCALRDLGFKGNRFTWQNNQPGIAFIRKRLDRCIGNVDFLNLYHSVTINHLGFLSSDHRVLEAVLKESED
        D N I    E  GG  F  S      N L++C+L DLGFKGN FTW N + G   I++RLDR + N ++  L+   TI HL  LSSDH  L  V+   ED
Subjt:  DLNAITHAQENDGGGDFERSQSLNFLNVLNDCALRDLGFKGNRFTWQNNQPGIAFIRKRLDRCIGNVDFLNLYHSVTINHLGFLSSDHRVLEAVLKESED

Query:  LRHAGNKKPHFKFEEAWTLHEDCISAIQTGW
        +      KP F+FEEAWT   +C   I+  W
Subjt:  LRHAGNKKPHFKFEEAWTLHEDCISAIQTGW

A0A5C7I485 CCHC-type domain-containing protein2.3e-1738.17Show/hide
Query:  DLNAITHAQENDGGGDFERSQSLNFLNVLNDCALRDLGFKGNRFTWQNNQPGIAFIRKRLDRCIGNVDFLNLYHSVTINHLGFLSSDHRVLEAVLKESED
        D N I    +  GG +       NF NV+++C L DLGF G R TW N + G+A +++RLDR + N  +++L+    I HLGF S DH  L  V  E   
Subjt:  DLNAITHAQENDGGGDFERSQSLNFLNVLNDCALRDLGFKGNRFTWQNNQPGIAFIRKRLDRCIGNVDFLNLYHSVTINHLGFLSSDHRVLEAVLKESED

Query:  LRHAGNKKPHFKFEEAWTLHEDCISAIQTGW
          +A  K+  FKFE  W   E+C+S ++  W
Subjt:  LRHAGNKKPHFKFEEAWTLHEDCISAIQTGW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACGTTATTACGACGTCTTGCAGATATTCCTCACACAGCATGGATGATAGCAGGGATCTAAATGCAATTACCCATGCACAAGAAAATGATGGAGGAGGAGATTTTGA
GAGATCTCAAAGCCTAAATTTCCTGAACGTTTTAAATGACTGTGCATTGCGAGATCTTGGTTTTAAGGGCAATCGTTTCACGTGGCAAAATAACCAACCTGGAATAGCTT
TTATTCGTAAAAGGCTGGACAGATGTATCGGTAATGTTGATTTCTTGAATCTTTATCATTCTGTCACTATTAATCATCTTGGTTTTTTGTCTTCAGATCATCGAGTGTTA
GAAGCTGTCTTAAAAGAATCAGAAGACCTTCGCCATGCGGGGAACAAAAAACCCCATTTCAAATTCGAAGAAGCTTGGACCCTCCATGAGGACTGCATTTCAGCAATCCA
GACCGGATGGGAAAAGGTGGAGGTGATGATTCGCCAAATAATTTACTCACCCGCATCGAAGTGTTACAGAAGAGCTAAAGCGGTGGGGAAGGAACAAGACAGGAAAATTC
AAAACAAGAATCATGGAGGCCAAGAGGAAAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGACGTTATTACGACGTCTTGCAGATATTCCTCACACAGCATGGATGATAGCAGGGATCTAAATGCAATTACCCATGCACAAGAAAATGATGGAGGAGGAGATTTTGA
GAGATCTCAAAGCCTAAATTTCCTGAACGTTTTAAATGACTGTGCATTGCGAGATCTTGGTTTTAAGGGCAATCGTTTCACGTGGCAAAATAACCAACCTGGAATAGCTT
TTATTCGTAAAAGGCTGGACAGATGTATCGGTAATGTTGATTTCTTGAATCTTTATCATTCTGTCACTATTAATCATCTTGGTTTTTTGTCTTCAGATCATCGAGTGTTA
GAAGCTGTCTTAAAAGAATCAGAAGACCTTCGCCATGCGGGGAACAAAAAACCCCATTTCAAATTCGAAGAAGCTTGGACCCTCCATGAGGACTGCATTTCAGCAATCCA
GACCGGATGGGAAAAGGTGGAGGTGATGATTCGCCAAATAATTTACTCACCCGCATCGAAGTGTTACAGAAGAGCTAAAGCGGTGGGGAAGGAACAAGACAGGAAAATTC
AAAACAAGAATCATGGAGGCCAAGAGGAAAATTGA
Protein sequenceShow/hide protein sequence
MDVITTSCRYSSHSMDDSRDLNAITHAQENDGGGDFERSQSLNFLNVLNDCALRDLGFKGNRFTWQNNQPGIAFIRKRLDRCIGNVDFLNLYHSVTINHLGFLSSDHRVL
EAVLKESEDLRHAGNKKPHFKFEEAWTLHEDCISAIQTGWEKVEVMIRQIIYSPASKCYRRAKAVGKEQDRKIQNKNHGGQEEN