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Lag0018871 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0018871
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionTransposon TX1 uncharacterized 149 kDa protein
Genome locationchr5:35688603..35689121
RNA-Seq ExpressionLag0018871
SyntenyLag0018871
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN68382.1 hypothetical protein VITISV_041532 [Vitis vinifera]3.9e-2643.79Show/hide
Query:  DDLDETGNLAEELKVERFALKGELGEVIRREISSWRQKANVKWAKDVDCNSAFFHCWVNGGRSKNLIESMETDRGESIKGE----EEILSFFSKLYGPIV
        D +++ G L  +L  +R + KGEL E+I RE   WRQKA VKW K+ DCNS FFH   NGGR++  I+ +E +RG  +K      EEIL +F KLY    
Subjt:  DDLDETGNLAEELKVERFALKGELGEVIRREISSWRQKANVKWAKDVDCNSAFFHCWVNGGRSKNLIESMETDRGESIKGE----EEILSFFSKLYGPIV

Query:  EAKLFVEGVEWNSILEREKLELDSLFSLEEIRRVMFKCDRNKSSGPEEFLLGK
             VEG++W+ I E   L LDS F+ EEI + +F+ DR+K+ GP  F + +
Subjt:  EAKLFVEGVEWNSILEREKLELDSLFSLEEIRRVMFKCDRNKSSGPEEFLLGK

CAN70928.1 hypothetical protein VITISV_016057 [Vitis vinifera]3.3e-2541.57Show/hide
Query:  MGKVKATDDLDETGNLAEELKVERFALKGELGEVIRREISSWRQKANVKWAKDVDCNSAFFHCWVNGGRSKNLIESMETDRG------ESIKGEEEILSF
        + ++   D +++ G L+ +L  +R  +KGEL E+I RE   WRQKA VKW KD DCNS  FH   NG +++N I+ +E +RG      ESI   EEIL +
Subjt:  MGKVKATDDLDETGNLAEELKVERFALKGELGEVIRREISSWRQKANVKWAKDVDCNSAFFHCWVNGGRSKNLIESMETDRG------ESIKGEEEILSF

Query:  FSKLYGPIVEAKLFVEGVEWNSILEREKLELDSLFSLEEIRRVMFKCDRNKSSGPEEFLLGKLGGY
        F KLY   +     VEG++W+ ILE     LDS F+ EEI   +F+ DR+K+SG + F +     Y
Subjt:  FSKLYGPIVEAKLFVEGVEWNSILEREKLELDSLFSLEEIRRVMFKCDRNKSSGPEEFLLGKLGGY

CAN79490.1 hypothetical protein VITISV_033371 [Vitis vinifera]4.3e-2542.38Show/hide
Query:  DDLDETGNLAEELKVERFALKGELGEVIRREISSWRQKANVKWAKDVDCNSAFFHCWVNGGRSKNLIESMETDRGESIKG----EEEILSFFSKLYGPIV
        D +++ G L  +L  +R + KGEL E+I RE   WRQK+ VKW K+ DCNS F+H   NG R++  I+ +E +RG  +K      EEIL +F KLY   +
Subjt:  DDLDETGNLAEELKVERFALKGELGEVIRREISSWRQKANVKWAKDVDCNSAFFHCWVNGGRSKNLIESMETDRGESIKG----EEEILSFFSKLYGPIV

Query:  EAKLFVEGVEWNSILEREKLELDSLFSLEEIRRVMFKCDRNKSSGPEEFLL
             VEG++W+ I E   L LDS F+ EEI + +F+ DR+K+ GP+ F +
Subjt:  EAKLFVEGVEWNSILEREKLELDSLFSLEEIRRVMFKCDRNKSSGPEEFLL

RVW66522.1 putative ribonuclease H protein [Vitis vinifera]1.9e-2543.71Show/hide
Query:  DDLDETGNLAEELKVERFALKGELGEVIRREISSWRQKANVKWAKDVDCNSAFFHCWVNGGRSKNLIESMETDRGESIKG----EEEILSFFSKLYGPIV
        D + + G L  +L  +R + KGEL E+I RE   WRQKA VKW K+ DCNS F+H   NG R++  I+ +E DRG  +K      EEIL +F KLY    
Subjt:  DDLDETGNLAEELKVERFALKGELGEVIRREISSWRQKANVKWAKDVDCNSAFFHCWVNGGRSKNLIESMETDRGESIKG----EEEILSFFSKLYGPIV

Query:  EAKLFVEGVEWNSILEREKLELDSLFSLEEIRRVMFKCDRNKSSGPEEFLL
             VEG++W+ I E   L LDS F+ EEI + +F+ DR+K+ GP++F +
Subjt:  EAKLFVEGVEWNSILEREKLELDSLFSLEEIRRVMFKCDRNKSSGPEEFLL

RVW91479.1 Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]5.6e-2543.05Show/hide
Query:  DDLDETGNLAEELKVERFALKGELGEVIRREISSWRQKANVKWAKDVDCNSAFFHCWVNGGRSKNLIESMETDRGESIKG----EEEILSFFSKLYGPIV
        D +++ G L  +L  +R + KGEL E+I RE   WRQKA VKW K+ DCNS F+H   NG R++  I+ +E +RG  +K      EEIL +F KLY   +
Subjt:  DDLDETGNLAEELKVERFALKGELGEVIRREISSWRQKANVKWAKDVDCNSAFFHCWVNGGRSKNLIESMETDRGESIKG----EEEILSFFSKLYGPIV

Query:  EAKLFVEGVEWNSILEREKLELDSLFSLEEIRRVMFKCDRNKSSGPEEFLL
             VEG++W+ I E   L LDS F+ EEI + +F+ DR+K+ GP+ F +
Subjt:  EAKLFVEGVEWNSILEREKLELDSLFSLEEIRRVMFKCDRNKSSGPEEFLL

TrEMBL top hitse value%identityAlignment
A0A438G2V0 Putative ribonuclease H protein9.3e-2643.71Show/hide
Query:  DDLDETGNLAEELKVERFALKGELGEVIRREISSWRQKANVKWAKDVDCNSAFFHCWVNGGRSKNLIESMETDRGESIKG----EEEILSFFSKLYGPIV
        D + + G L  +L  +R + KGEL E+I RE   WRQKA VKW K+ DCNS F+H   NG R++  I+ +E DRG  +K      EEIL +F KLY    
Subjt:  DDLDETGNLAEELKVERFALKGELGEVIRREISSWRQKANVKWAKDVDCNSAFFHCWVNGGRSKNLIESMETDRGESIKG----EEEILSFFSKLYGPIV

Query:  EAKLFVEGVEWNSILEREKLELDSLFSLEEIRRVMFKCDRNKSSGPEEFLL
             VEG++W+ I E   L LDS F+ EEI + +F+ DR+K+ GP++F +
Subjt:  EAKLFVEGVEWNSILEREKLELDSLFSLEEIRRVMFKCDRNKSSGPEEFLL

A0A438K369 Transposon TX1 uncharacterized 149 kDa protein2.7e-2544.37Show/hide
Query:  DDLDETGNLAEELKVERFALKGELGEVIRREISSWRQKANVKWAKDVDCNSAFFHCWVNGGRSKNLIESMETDRG----ESIKGEEEILSFFSKLYGPIV
        D +++ G L+ EL ++R   KGEL E+I RE   WRQKA VKW K+ DCNS FFH   NG R++  I+ +E +RG    +S    EEIL +F KLY   +
Subjt:  DDLDETGNLAEELKVERFALKGELGEVIRREISSWRQKANVKWAKDVDCNSAFFHCWVNGGRSKNLIESMETDRG----ESIKGEEEILSFFSKLYGPIV

Query:  EAKLFVEGVEWNSILEREKLELDSLFSLEEIRRVMFKCDRNKSSGPEEFLL
             VEG++W+ I E     LDS F  EEI +V+ + DR+K+SGP+ F +
Subjt:  EAKLFVEGVEWNSILEREKLELDSLFSLEEIRRVMFKCDRNKSSGPEEFLL

A5BWD2 Reverse transcriptase domain-containing protein1.9e-2643.79Show/hide
Query:  DDLDETGNLAEELKVERFALKGELGEVIRREISSWRQKANVKWAKDVDCNSAFFHCWVNGGRSKNLIESMETDRGESIKGE----EEILSFFSKLYGPIV
        D +++ G L  +L  +R + KGEL E+I RE   WRQKA VKW K+ DCNS FFH   NGGR++  I+ +E +RG  +K      EEIL +F KLY    
Subjt:  DDLDETGNLAEELKVERFALKGELGEVIRREISSWRQKANVKWAKDVDCNSAFFHCWVNGGRSKNLIESMETDRGESIKGE----EEILSFFSKLYGPIV

Query:  EAKLFVEGVEWNSILEREKLELDSLFSLEEIRRVMFKCDRNKSSGPEEFLLGK
             VEG++W+ I E   L LDS F+ EEI + +F+ DR+K+ GP  F + +
Subjt:  EAKLFVEGVEWNSILEREKLELDSLFSLEEIRRVMFKCDRNKSSGPEEFLLGK

A5BZE1 Uncharacterized protein2.1e-2542.38Show/hide
Query:  DDLDETGNLAEELKVERFALKGELGEVIRREISSWRQKANVKWAKDVDCNSAFFHCWVNGGRSKNLIESMETDRGESIKG----EEEILSFFSKLYGPIV
        D +++ G L  +L  +R + KGEL E+I RE   WRQK+ VKW K+ DCNS F+H   NG R++  I+ +E +RG  +K      EEIL +F KLY   +
Subjt:  DDLDETGNLAEELKVERFALKGELGEVIRREISSWRQKANVKWAKDVDCNSAFFHCWVNGGRSKNLIESMETDRGESIKG----EEEILSFFSKLYGPIV

Query:  EAKLFVEGVEWNSILEREKLELDSLFSLEEIRRVMFKCDRNKSSGPEEFLL
             VEG++W+ I E   L LDS F+ EEI + +F+ DR+K+ GP+ F +
Subjt:  EAKLFVEGVEWNSILEREKLELDSLFSLEEIRRVMFKCDRNKSSGPEEFLL

A5C6D8 Reverse transcriptase domain-containing protein1.6e-2541.57Show/hide
Query:  MGKVKATDDLDETGNLAEELKVERFALKGELGEVIRREISSWRQKANVKWAKDVDCNSAFFHCWVNGGRSKNLIESMETDRG------ESIKGEEEILSF
        + ++   D +++ G L+ +L  +R  +KGEL E+I RE   WRQKA VKW KD DCNS  FH   NG +++N I+ +E +RG      ESI   EEIL +
Subjt:  MGKVKATDDLDETGNLAEELKVERFALKGELGEVIRREISSWRQKANVKWAKDVDCNSAFFHCWVNGGRSKNLIESMETDRG------ESIKGEEEILSF

Query:  FSKLYGPIVEAKLFVEGVEWNSILEREKLELDSLFSLEEIRRVMFKCDRNKSSGPEEFLLGKLGGY
        F KLY   +     VEG++W+ ILE     LDS F+ EEI   +F+ DR+K+SG + F +     Y
Subjt:  FSKLYGPIVEAKLFVEGVEWNSILEREKLELDSLFSLEEIRRVMFKCDRNKSSGPEEFLLGKLGGY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAAAGTTAAGGCTACTGATGACTTGGATGAAACTGGGAACTTAGCTGAGGAGTTGAAGGTAGAGAGGTTCGCCTTAAAAGGGGAGTTGGGTGAGGTGATTAGGAG
AGAGATTAGCAGCTGGAGACAAAAGGCTAATGTGAAGTGGGCTAAGGATGTTGATTGCAACTCGGCTTTCTTCCACTGTTGGGTTAATGGTGGGAGGAGTAAGAACTTAA
TTGAGTCTATGGAAACTGATAGAGGGGAAAGTATTAAGGGAGAGGAGGAAATTTTATCCTTCTTCTCTAAGCTTTATGGGCCAATTGTTGAGGCCAAACTGTTTGTGGAG
GGAGTGGAGTGGAATTCCATATTGGAGCGTGAGAAATTGGAGCTTGATTCCCTGTTCTCATTGGAAGAAATCAGGAGAGTTATGTTCAAGTGTGATAGGAACAAATCCTC
AGGTCCTGAAGAGTTTCTTTTAGGAAAACTAGGAGGTTATCAAGGAGGATATCTTTCAAGTCTTTACGGAGTTCCATGA
mRNA sequenceShow/hide mRNA sequence
ATGGGGAAAGTTAAGGCTACTGATGACTTGGATGAAACTGGGAACTTAGCTGAGGAGTTGAAGGTAGAGAGGTTCGCCTTAAAAGGGGAGTTGGGTGAGGTGATTAGGAG
AGAGATTAGCAGCTGGAGACAAAAGGCTAATGTGAAGTGGGCTAAGGATGTTGATTGCAACTCGGCTTTCTTCCACTGTTGGGTTAATGGTGGGAGGAGTAAGAACTTAA
TTGAGTCTATGGAAACTGATAGAGGGGAAAGTATTAAGGGAGAGGAGGAAATTTTATCCTTCTTCTCTAAGCTTTATGGGCCAATTGTTGAGGCCAAACTGTTTGTGGAG
GGAGTGGAGTGGAATTCCATATTGGAGCGTGAGAAATTGGAGCTTGATTCCCTGTTCTCATTGGAAGAAATCAGGAGAGTTATGTTCAAGTGTGATAGGAACAAATCCTC
AGGTCCTGAAGAGTTTCTTTTAGGAAAACTAGGAGGTTATCAAGGAGGATATCTTTCAAGTCTTTACGGAGTTCCATGA
Protein sequenceShow/hide protein sequence
MGKVKATDDLDETGNLAEELKVERFALKGELGEVIRREISSWRQKANVKWAKDVDCNSAFFHCWVNGGRSKNLIESMETDRGESIKGEEEILSFFSKLYGPIVEAKLFVE
GVEWNSILEREKLELDSLFSLEEIRRVMFKCDRNKSSGPEEFLLGKLGGYQGGYLSSLYGVP