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Lag0018873 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0018873
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionUnknown protein
Genome locationchr5:35703810..35706577
RNA-Seq ExpressionLag0018873
SyntenyLag0018873
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022143535.1 uncharacterized protein LOC111013412 [Momordica charantia]9.5e-0437.65Show/hide
Query:  NIKSLEAKVIWEGLKYMESTCKRDRIPLEVKSDSMEVISAINENAEDFTELKNMVEAIWFISSAFESVSFNHCRREANTVVHCVA
        NI  LE   I EGL+ +     R   P+ ++SDS+E I  ++   +D TE+  ++E IW +    E VS  H  REAN V H +A
Subjt:  NIKSLEAKVIWEGLKYMESTCKRDRIPLEVKSDSMEVISAINENAEDFTELKNMVEAIWFISSAFESVSFNHCRREANTVVHCVA
TrEMBL top hitse value%identityAlignment
A0A6J1CP26 uncharacterized protein LOC1110134124.6e-0437.65Show/hide
Query:  NIKSLEAKVIWEGLKYMESTCKRDRIPLEVKSDSMEVISAINENAEDFTELKNMVEAIWFISSAFESVSFNHCRREANTVVHCVA
        NI  LE   I EGL+ +     R   P+ ++SDS+E I  ++   +D TE+  ++E IW +    E VS  H  REAN V H +A
Subjt:  NIKSLEAKVIWEGLKYMESTCKRDRIPLEVKSDSMEVISAINENAEDFTELKNMVEAIWFISSAFESVSFNHCRREANTVVHCVA
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAATCTTTGAAACCCATCTCTCACGAGGGCATCATAAGCTCCTCGGATGCCTCCCGTATGGGCATCCTAGGATGCCCGGGCATCCCGAATTTCCTAGGCATCCAAC
ATTACCACAAAACAAACGAATTGCAAAAACTAAAAAGAGATGGAACATTAAATCGCTTGAAGCAAAAGTGATATGGGAAGGGCTCAAGTACATGGAATCTACGTGTAAAC
GCGATCGAATTCCCTTGGAGGTTAAATCCGACTCCATGGAGGTCATCAGCGCCATAAACGAAAATGCAGAAGATTTCACGGAATTGAAAAACATGGTGGAGGCCATTTGG
TTTATTTCCTCAGCCTTCGAATCAGTGAGCTTCAACCATTGTCGAAGGGAGGCAAACACAGTAGTCCACTGCGTCGCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGAATCTTTGAAACCCATCTCTCACGAGGGCATCATAAGCTCCTCGGATGCCTCCCGTATGGGCATCCTAGGATGCCCGGGCATCCCGAATTTCCTAGGCATCCAAC
ATTACCACAAAACAAACGAATTGCAAAAACTAAAAAGAGATGGAACATTAAATCGCTTGAAGCAAAAGTGATATGGGAAGGGCTCAAGTACATGGAATCTACGTGTAAAC
GCGATCGAATTCCCTTGGAGGTTAAATCCGACTCCATGGAGGTCATCAGCGCCATAAACGAAAATGCAGAAGATTTCACGGAATTGAAAAACATGGTGGAGGCCATTTGG
TTTATTTCCTCAGCCTTCGAATCAGTGAGCTTCAACCATTGTCGAAGGGAGGCAAACACAGTAGTCCACTGCGTCGCTTAA
Protein sequenceShow/hide protein sequence
MGIFETHLSRGHHKLLGCLPYGHPRMPGHPEFPRHPTLPQNKRIAKTKKRWNIKSLEAKVIWEGLKYMESTCKRDRIPLEVKSDSMEVISAINENAEDFTELKNMVEAIW
FISSAFESVSFNHCRREANTVVHCVA