CuGenDBv2

Gene ID	Lag0018949
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	cytochrome c oxidase subunit 6a, mitochondrial-like
Genome location	chr5:36912194..36913938
RNA-Seq Expression	Lag0018949
Synteny	Lag0018949
Gene Ontology terms	GO:0006123 - mitochondrial electron transport, cytochrome c to oxygen (biological process) GO:0050790 - regulation of catalytic activity (biological process) GO:1902600 - proton transmembrane transport (biological process) GO:0005751 - mitochondrial respiratory chain complex IV (cellular component) GO:0004129 - cytochrome-c oxidase activity (molecular function) GO:0030234 - enzyme regulator activity (molecular function)
InterPro domains	IPR001349 - Cytochrome c oxidase, subunit VIa IPR036418 - Cytochrome c oxidase, subunit VIa superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

KAG7015416.1 Cytochrome c oxidase subunit 6a, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma]

3.4e-41

90.43

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Query:  MAMATIRSNLLRAAFRGASRNSAQPKRGFASSAHDDAHEAAKWEEITYLGIATCSSLAIYNLSKGHPHYEEPPAYPYLHIRNKEFPWGKLPLHY
        MAMATIRSNLLRAAFRGASRNSAQPKRGFASSAHDDA E AKWE+ITY GI +CS LA YNLSKGHPHYEEPPAYPYLHIRNKEFPWGKLP HY
Subjt:  MAMATIRSNLLRAAFRGASRNSAQPKRGFASSAHDDAHEAAKWEEITYLGIATCSSLAIYNLSKGHPHYEEPPAYPYLHIRNKEFPWGKLPLHY

XP_022929363.1 cytochrome c oxidase subunit 6a, mitochondrial-like [Cucurbita moschata]

4.6e-38

90.91

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Query:  MAMATIRSNLLRAAFRGASRNSAQPKRGFASSAHDDAHEAAKWEEITYLGIATCSSLAIYNLSKGHPHYEEPPAYPYLHIRNKEFPWG
        MAMATIRSNLLRAAFRGASRNSAQPKRGFASSAHDDA E AKWE+ITY GI +CS LA YNLSKGHPHYEEPPAYPYLHIRNKEFPWG
Subjt:  MAMATIRSNLLRAAFRGASRNSAQPKRGFASSAHDDAHEAAKWEEITYLGIATCSSLAIYNLSKGHPHYEEPPAYPYLHIRNKEFPWG

XP_022941809.1 cytochrome c oxidase subunit 6a, mitochondrial-like [Cucurbita moschata]

1.7e-37

89.77

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Query:  MAMATIRSNLLRAAFRGASRNSAQPKRGFASSAHDDAHEAAKWEEITYLGIATCSSLAIYNLSKGHPHYEEPPAYPYLHIRNKEFPWG
        MAMATIRSNLLRAAFRGASRNSAQPKRGFASSAHDDA E AKWE+ITY GIA C++LA YNLSKGHPH+EEPPAYPYLHIRNKEFPWG
Subjt:  MAMATIRSNLLRAAFRGASRNSAQPKRGFASSAHDDAHEAAKWEEITYLGIATCSSLAIYNLSKGHPHYEEPPAYPYLHIRNKEFPWG

XP_023001309.1 cytochrome c oxidase subunit 6a, mitochondrial-like [Cucurbita maxima]

8.6e-37

88.64

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Query:  MAMATIRSNLLRAAFRGASRNSAQPKRGFASSAHDDAHEAAKWEEITYLGIATCSSLAIYNLSKGHPHYEEPPAYPYLHIRNKEFPWG
        MAMATIRSNLLRAA RGASRNSAQPKRGFASSAHDDA E AKWE+ITY GIA C++LA YNLSKGHPH+EEPPAYPYLHIRNKEFPWG
Subjt:  MAMATIRSNLLRAAFRGASRNSAQPKRGFASSAHDDAHEAAKWEEITYLGIATCSSLAIYNLSKGHPHYEEPPAYPYLHIRNKEFPWG

XP_023551866.1 cytochrome c oxidase subunit 6a, mitochondrial-like [Cucurbita pepo subsp. pepo]

2.3e-37

89.77

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Query:  MAMATIRSNLLRAAFRGASRNSAQPKRGFASSAHDDAHEAAKWEEITYLGIATCSSLAIYNLSKGHPHYEEPPAYPYLHIRNKEFPWG
        MAMATIRSNLLRAA RGASRNSAQPKRGFASSAHDDA E AKWE+ITY GI +CS LA YNLSKGHPHYEEPPAYPYLHIRNKEFPWG
Subjt:  MAMATIRSNLLRAAFRGASRNSAQPKRGFASSAHDDAHEAAKWEEITYLGIATCSSLAIYNLSKGHPHYEEPPAYPYLHIRNKEFPWG

TrEMBL top hits

e value

%identity

Alignment

A0A6J1C3V4 cytochrome c oxidase subunit 6a, mitochondrial

1.2e-36

86.36

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Query:  MAMATIRSNLLRAAFRGASRNSAQPKRGFASSAHDDAHEAAKWEEITYLGIATCSSLAIYNLSKGHPHYEEPPAYPYLHIRNKEFPWG
        MAMATIRSNLLRAAFRGAS+NSAQPKRGFASSAHDD  E AKWE+ITY GI  C++LA YNLSKGHPH+EEPPAYPYLHIRNKEFPWG
Subjt:  MAMATIRSNLLRAAFRGASRNSAQPKRGFASSAHDDAHEAAKWEEITYLGIATCSSLAIYNLSKGHPHYEEPPAYPYLHIRNKEFPWG

A0A6J1ERW3 cytochrome c oxidase subunit 6a, mitochondrial-like

2.2e-38

90.91

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Query:  MAMATIRSNLLRAAFRGASRNSAQPKRGFASSAHDDAHEAAKWEEITYLGIATCSSLAIYNLSKGHPHYEEPPAYPYLHIRNKEFPWG
        MAMATIRSNLLRAAFRGASRNSAQPKRGFASSAHDDA E AKWE+ITY GI +CS LA YNLSKGHPHYEEPPAYPYLHIRNKEFPWG
Subjt:  MAMATIRSNLLRAAFRGASRNSAQPKRGFASSAHDDAHEAAKWEEITYLGIATCSSLAIYNLSKGHPHYEEPPAYPYLHIRNKEFPWG

A0A6J1FPI8 cytochrome c oxidase subunit 6a, mitochondrial-like

8.4e-38

89.77

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Query:  MAMATIRSNLLRAAFRGASRNSAQPKRGFASSAHDDAHEAAKWEEITYLGIATCSSLAIYNLSKGHPHYEEPPAYPYLHIRNKEFPWG
        MAMATIRSNLLRAAFRGASRNSAQPKRGFASSAHDDA E AKWE+ITY GIA C++LA YNLSKGHPH+EEPPAYPYLHIRNKEFPWG
Subjt:  MAMATIRSNLLRAAFRGASRNSAQPKRGFASSAHDDAHEAAKWEEITYLGIATCSSLAIYNLSKGHPHYEEPPAYPYLHIRNKEFPWG

A0A6J1J8L1 cytochrome c oxidase subunit 6a, mitochondrial-like

4.2e-37

88.64

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Query:  MAMATIRSNLLRAAFRGASRNSAQPKRGFASSAHDDAHEAAKWEEITYLGIATCSSLAIYNLSKGHPHYEEPPAYPYLHIRNKEFPWG
        MAMA IRSNLLRAAFRGASRN AQPKRGFASSAHDDA E AKWE+ITY GI +CS LA YNLSKGHPHYEEPPAYPYLHIRNKEFPWG
Subjt:  MAMATIRSNLLRAAFRGASRNSAQPKRGFASSAHDDAHEAAKWEEITYLGIATCSSLAIYNLSKGHPHYEEPPAYPYLHIRNKEFPWG

A0A6J1KMD3 cytochrome c oxidase subunit 6a, mitochondrial-like

4.2e-37

88.64

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Query:  MAMATIRSNLLRAAFRGASRNSAQPKRGFASSAHDDAHEAAKWEEITYLGIATCSSLAIYNLSKGHPHYEEPPAYPYLHIRNKEFPWG
        MAMATIRSNLLRAA RGASRNSAQPKRGFASSAHDDA E AKWE+ITY GIA C++LA YNLSKGHPH+EEPPAYPYLHIRNKEFPWG
Subjt:  MAMATIRSNLLRAAFRGASRNSAQPKRGFASSAHDDAHEAAKWEEITYLGIATCSSLAIYNLSKGHPHYEEPPAYPYLHIRNKEFPWG

SwissProt top hits

e value

%identity

Alignment

Q9T070 Cytochrome c oxidase subunit 6a, mitochondrial

3.4e-28

68.54

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Query:  MAMATIRSNLLRAAFRGASRNSAQPKRGFASSA-HDDAHEAAKWEEITYLGIATCSSLAIYNLSKGHPHYEEPPAYPYLHIRNKEFPWG
        MA A +RS L RA  R A + S  PKR F+SSA HDDA+EAAKWE+ITYLGIA+C++LA+Y LSKGH H E+PPAYP++HIRNKEFPWG
Subjt:  MAMATIRSNLLRAAFRGASRNSAQPKRGFASSA-HDDAHEAAKWEEITYLGIATCSSLAIYNLSKGHPHYEEPPAYPYLHIRNKEFPWG

Arabidopsis top hits

e value

%identity

Alignment

AT4G37830.1 cytochrome c oxidase-related

2.4e-29

68.54

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Query:  MAMATIRSNLLRAAFRGASRNSAQPKRGFASSA-HDDAHEAAKWEEITYLGIATCSSLAIYNLSKGHPHYEEPPAYPYLHIRNKEFPWG
        MA A +RS L RA  R A + S  PKR F+SSA HDDA+EAAKWE+ITYLGIA+C++LA+Y LSKGH H E+PPAYP++HIRNKEFPWG
Subjt:  MAMATIRSNLLRAAFRGASRNSAQPKRGFASSA-HDDAHEAAKWEEITYLGIATCSSLAIYNLSKGHPHYEEPPAYPYLHIRNKEFPWG

AT4G37830.2 cytochrome c oxidase-related

4.1e-21

59.55

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Query:  MAMATIRSNLLRAAFRGASRNSAQPKRGFASSA-HDDAHEAAKWEEITYLGIATCSSLAIYNLSKGHPHYEEPPAYPYLHIRNKEFPWG
        MA A +RS L RA  R A + S  PKR F+SSA HDDA+EAAKWE+ITYLGIA+C++LA+Y LSKGH H E+PP          EFPWG
Subjt:  MAMATIRSNLLRAAFRGASRNSAQPKRGFASSA-HDDAHEAAKWEEITYLGIATCSSLAIYNLSKGHPHYEEPPAYPYLHIRNKEFPWG

Sequences

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CDS sequence

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ATGGCAATGGCGACGATCCGATCCAATCTTCTTCGCGCCGCCTTCCGCGGTGCCTCTCGAAACTCCGCTCAGCCAAAACGCGGCTTCGCTTCCTCTGCTCACGACGATGC
TCATGAAGCGGCAAAGTGGGAGGAGATTACTTATTTAGGCATTGCAACCTGCAGTTCTTTAGCGATCTATAATTTATCAAAGGGCCACCCCCACTATGAAGAGCCTCCTG
CATATCCATATTTGCACATACGCAATAAAGAATTCCCATGGGGTAAGCTTCCGCTTCATTACAAGTTTTACGACATCTTTTATCCCTTAGCAAATTTGGTTGTGATGAGG
AAACTAGAACTGAATACTTTAATGCTGTCATTGTGCTATTTTCTTCCAATTAAAGATGGTGCTATGTCATTTCCTTGCATTTAG

mRNA sequence

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Protein sequence

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MAMATIRSNLLRAAFRGASRNSAQPKRGFASSAHDDAHEAAKWEEITYLGIATCSSLAIYNLSKGHPHYEEPPAYPYLHIRNKEFPWGKLPLHYKFYDIFYPLANLVVMR
KLELNTLMLSLCYFLPIKDGAMSFPCI

Lag0018949 (gene) of Sponge gourd (AG-4) v1 genome