; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0018956 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0018956
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRNase H domain-containing protein
Genome locationchr5:37019709..37020047
RNA-Seq ExpressionLag0018956
SyntenyLag0018956
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_018859783.1 uncharacterized protein LOC109021580 [Juglans regia]4.8e-0937.5Show/hide
Query:  ELLAIIEGLKFAERLGQDRIEVESDCLHAISLINRDDEVRNEMGTLIEDIKRRSGAFSWIIFSYVSRFGNVVADAIAKWAKREKKEEVWSFLFPEWICTL
        EL+A++ GL+F  +LG  RI +ESDCL  +  +  D E  +  G LI ++KR    F      +V R GN VA  +A+ A R K  E+W   FP++I   
Subjt:  ELLAIIEGLKFAERLGQDRIEVESDCLHAISLINRDDEVRNEMGTLIEDIKRRSGAFSWIIFSYVSRFGNVVADAIAKWAKREKKEEVWSFLFPEWICTL

Query:  ISFD
        +  D
Subjt:  ISFD
XP_021859944.1 uncharacterized protein LOC110799052 [Spinacia oleracea]3.6e-0933.96Show/hide
Query:  MAELLAIIEGLKFAERLGQDRIEVESDCLHAISLINRDDEVRNEMGTLIEDIKRRSGAFSWIIFSYVSRFGNVVADAIAKWAKREKKEEVWSFLFPEWIC
        M E  A+  GL+ A RLG + + +ESD L  ++ ++ + E  + + TL++DI++ +  FS  + S+V   GN VA  +A+W  ++  E V    FP+ I 
Subjt:  MAELLAIIEGLKFAERLGQDRIEVESDCLHAISLINRDDEVRNEMGTLIEDIKRRSGAFSWIIFSYVSRFGNVVADAIAKWAKREKKEEVWSFLFPEWIC

Query:  TLISFD
        TL   D
Subjt:  TLISFD
XP_027101192.1 uncharacterized protein LOC113720678 [Coffea arabica]2.1e-0938.53Show/hide
Query:  PPMAELLAIIEGLKFAERLGQDRIEVESDCLHAISLIN-RDDEVRNEMGTLIEDIKRRSGAFSWIIFSYVSRFGNVVADAIAKWAKREKKEEVWSFLFPE
        P M E LA+   +  A++ G  R+E ESDC + I  IN  +D+V  E+ T++ DIKR   +F    FS+  R  N V+  IAK+A   +K   W F FP 
Subjt:  PPMAELLAIIEGLKFAERLGQDRIEVESDCLHAISLIN-RDDEVRNEMGTLIEDIKRRSGAFSWIIFSYVSRFGNVVADAIAKWAKREKKEEVWSFLFPE

Query:  WICTLISFD
        W+  L+  D
Subjt:  WICTLISFD
XP_027119939.1 uncharacterized protein LOC113736922 [Coffea arabica]3.6e-0938.61Show/hide
Query:  AIIEGLKFAERLGQDRIEVESDCLHAISLINRDDEVRNEMGTLIEDIKRRSGAFSWIIFSYVSRFGNVVADAIAKWAKREKKEEVWSFLFPEWICTLISF
        AI +GL  A+ +G  RIE++ DC  AI  I++  E    + T++EDIK+ SG F +  FS+V R GN  A  +A++A +     VW   FP W+   I  
Subjt:  AIIEGLKFAERLGQDRIEVESDCLHAISLINRDDEVRNEMGTLIEDIKRRSGAFSWIIFSYVSRFGNVVADAIAKWAKREKKEEVWSFLFPEWICTLISF

Query:  D
        D
Subjt:  D
XP_027122102.1 uncharacterized protein LOC113739055 [Coffea arabica]6.2e-0934.62Show/hide
Query:  ELLAIIEGLKFAERLGQDRIEVESDCLHAISLINRDDEVRNEMGTLIEDIKRRSGAFSWIIFSYVSRFGNVVADAIAKWAKREKKEEVWSFLFPEWICTL
        E LAI   L+ A+  G   IEV+SDC H +SLIN D+     + T+++DI  + G F    F++V R  N  +  +A++A +  ++  W   FP W+ +L
Subjt:  ELLAIIEGLKFAERLGQDRIEVESDCLHAISLINRDDEVRNEMGTLIEDIKRRSGAFSWIIFSYVSRFGNVVADAIAKWAKREKKEEVWSFLFPEWICTL

Query:  ISFD
        +  D
Subjt:  ISFD
TrEMBL top hitse value%identityAlignment
A0A2I4HUH1 uncharacterized protein LOC1090215802.3e-0937.5Show/hide
Query:  ELLAIIEGLKFAERLGQDRIEVESDCLHAISLINRDDEVRNEMGTLIEDIKRRSGAFSWIIFSYVSRFGNVVADAIAKWAKREKKEEVWSFLFPEWICTL
        EL+A++ GL+F  +LG  RI +ESDCL  +  +  D E  +  G LI ++KR    F      +V R GN VA  +A+ A R K  E+W   FP++I   
Subjt:  ELLAIIEGLKFAERLGQDRIEVESDCLHAISLINRDDEVRNEMGTLIEDIKRRSGAFSWIIFSYVSRFGNVVADAIAKWAKREKKEEVWSFLFPEWICTL

Query:  ISFD
        +  D
Subjt:  ISFD
A0A6P6VGX4 uncharacterized protein LOC1137206781.0e-0938.53Show/hide
Query:  PPMAELLAIIEGLKFAERLGQDRIEVESDCLHAISLIN-RDDEVRNEMGTLIEDIKRRSGAFSWIIFSYVSRFGNVVADAIAKWAKREKKEEVWSFLFPE
        P M E LA+   +  A++ G  R+E ESDC + I  IN  +D+V  E+ T++ DIKR   +F    FS+  R  N V+  IAK+A   +K   W F FP 
Subjt:  PPMAELLAIIEGLKFAERLGQDRIEVESDCLHAISLIN-RDDEVRNEMGTLIEDIKRRSGAFSWIIFSYVSRFGNVVADAIAKWAKREKKEEVWSFLFPE

Query:  WICTLISFD
        W+  L+  D
Subjt:  WICTLISFD
A0A6P6WWZ3 uncharacterized protein LOC1137369221.8e-0938.61Show/hide
Query:  AIIEGLKFAERLGQDRIEVESDCLHAISLINRDDEVRNEMGTLIEDIKRRSGAFSWIIFSYVSRFGNVVADAIAKWAKREKKEEVWSFLFPEWICTLISF
        AI +GL  A+ +G  RIE++ DC  AI  I++  E    + T++EDIK+ SG F +  FS+V R GN  A  +A++A +     VW   FP W+   I  
Subjt:  AIIEGLKFAERLGQDRIEVESDCLHAISLINRDDEVRNEMGTLIEDIKRRSGAFSWIIFSYVSRFGNVVADAIAKWAKREKKEEVWSFLFPEWICTLISF

Query:  D
        D
Subjt:  D
A0A6P6X0C0 uncharacterized protein LOC1137373343.9e-0934.62Show/hide
Query:  ELLAIIEGLKFAERLGQDRIEVESDCLHAISLINRDDEVRNEMGTLIEDIKRRSGAFSWIIFSYVSRFGNVVADAIAKWAKREKKEEVWSFLFPEWICTL
        E LAI   L+ A+  G   IEV+SDC H +SLIN D+     + T+++DI  + G F    F++V R  N  +  +A++A +  ++  W   FP W+ +L
Subjt:  ELLAIIEGLKFAERLGQDRIEVESDCLHAISLINRDDEVRNEMGTLIEDIKRRSGAFSWIIFSYVSRFGNVVADAIAKWAKREKKEEVWSFLFPEWICTL

Query:  ISFD
        +  D
Subjt:  ISFD
A0A6P6X866 uncharacterized protein LOC1137390553.0e-0934.62Show/hide
Query:  ELLAIIEGLKFAERLGQDRIEVESDCLHAISLINRDDEVRNEMGTLIEDIKRRSGAFSWIIFSYVSRFGNVVADAIAKWAKREKKEEVWSFLFPEWICTL
        E LAI   L+ A+  G   IEV+SDC H +SLIN D+     + T+++DI  + G F    F++V R  N  +  +A++A +  ++  W   FP W+ +L
Subjt:  ELLAIIEGLKFAERLGQDRIEVESDCLHAISLINRDDEVRNEMGTLIEDIKRRSGAFSWIIFSYVSRFGNVVADAIAKWAKREKKEEVWSFLFPEWICTL

Query:  ISFD
        +  D
Subjt:  ISFD
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G13980.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein2.9e-0432.93Show/hide
Query:  PPMAELLAIIEGLKFAERLGQDRIEVESDCLHAISLINRDDEVRNEMGTLIEDIKRRSGAFSWIIFSYVSRFGNVVADAIAK
        P  AE  A++  L+     G  R+ +E DC    +L++      N +  L++DI+  +  FS + FS+V R GN VA  +AK
Subjt:  PPMAELLAIIEGLKFAERLGQDRIEVESDCLHAISLINRDDEVRNEMGTLIEDIKRRSGAFSWIIFSYVSRFGNVVADAIAK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTATCCTCCTCCCATGGCTGAACTCTTGGCTATTATTGAAGGTCTTAAGTTTGCTGAGCGATTAGGGCAGGACAGGATTGAGGTAGAGTCGGACTGTCTCCATGC
TATCAGCCTGATCAACAGGGATGATGAAGTTAGAAATGAAATGGGAACTTTGATCGAAGATATCAAGCGTCGATCGGGTGCTTTCTCGTGGATTATTTTCTCTTATGTTT
CTAGATTTGGTAATGTTGTAGCTGATGCTATAGCTAAATGGGCGAAAAGAGAAAAGAAGGAAGAAGTGTGGAGTTTCCTCTTTCCCGAGTGGATTTGTACTTTGATCAGT
TTTGACTAG
mRNA sequenceShow/hide mRNA sequence
ATGGATTATCCTCCTCCCATGGCTGAACTCTTGGCTATTATTGAAGGTCTTAAGTTTGCTGAGCGATTAGGGCAGGACAGGATTGAGGTAGAGTCGGACTGTCTCCATGC
TATCAGCCTGATCAACAGGGATGATGAAGTTAGAAATGAAATGGGAACTTTGATCGAAGATATCAAGCGTCGATCGGGTGCTTTCTCGTGGATTATTTTCTCTTATGTTT
CTAGATTTGGTAATGTTGTAGCTGATGCTATAGCTAAATGGGCGAAAAGAGAAAAGAAGGAAGAAGTGTGGAGTTTCCTCTTTCCCGAGTGGATTTGTACTTTGATCAGT
TTTGACTAG
Protein sequenceShow/hide protein sequence
MDYPPPMAELLAIIEGLKFAERLGQDRIEVESDCLHAISLINRDDEVRNEMGTLIEDIKRRSGAFSWIIFSYVSRFGNVVADAIAKWAKREKKEEVWSFLFPEWICTLIS
FD