; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0018957 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0018957
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr5:37022713..37023535
RNA-Seq ExpressionLag0018957
SyntenyLag0018957
Gene Ontology termsNA
InterPro domainsIPR000477 - Reverse transcriptase domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
OMO59710.1 reverse transcriptase [Corchorus capsularis]1.0e-6749.08Show/hide
Query:  MQDLHPSIDDVMNQSRLRPFSEEDILLALKQTHPHKAPGPDGLSGSFYKNHWPVVGRDVVQRCLAVLNHECSPISLNDTMIVLIPKIKAPRRVSDFRPIS
        ++ ++PSI   MN+  L  F+ E+I  ALKQ HP KAPGPDG+   F+K  W +VG DV   CL   +        N T IVLIPK+  P+ ++ FRPIS
Subjt:  MQDLHPSIDDVMNQSRLRPFSEEDILLALKQTHPHKAPGPDGLSGSFYKNHWPVVGRDVVQRCLAVLNHECSPISLNDTMIVLIPKIKAPRRVSDFRPIS

Query:  LCN--------------------SISSNQSAFVPDRCVVDNVILGFECIHELKCRSKGNSKWVALKLDMSKAYDRVEWSFLQRIMIRMGFTQQWVDLIMR
        LCN                     IS +QSAFVP R + DN+++ FE +H LK R  G   + ALKLDMSKAYDRVEW FL+ IM+RMGF ++WV+LIMR
Subjt:  LCN--------------------SISSNQSAFVPDRCVVDNVILGFECIHELKCRSKGNSKWVALKLDMSKAYDRVEWSFLQRIMIRMGFTQQWVDLIMR

Query:  CISSVSFSFNLNGEQLGHMVPSRGLRQGDPLSLYLFLLCVEGLSSLLRGAEQRSLISGFRIARSCPPMSHLFF
        C+ SVSFS  +NG+   +  P  GLRQGDPLS YLFL+C EGLS+LL   +   L+SG  ++R+ P +SHLFF
Subjt:  CISSVSFSFNLNGEQLGHMVPSRGLRQGDPLSLYLFLLCVEGLSSLLRGAEQRSLISGFRIARSCPPMSHLFF

XP_023878301.1 uncharacterized protein LOC111990748 [Quercus suber]1.2e-6849.25Show/hide
Query:  IDDVMNQSRLRPFSEEDILLALKQTHPHKAPGPDGLSGSFYKNHWPVVGRDVVQRCLAVLNHECSPISLNDTMIVLIPKIKAPRRVSDFRPISLCN----
        + + MN+S +R F++E++ +ALKQ HP+KAPGPDG+S  F++ +W +VG +V    L VLNH      LN T I LIPK   P+R++DFRPISLCN    
Subjt:  IDDVMNQSRLRPFSEEDILLALKQTHPHKAPGPDGLSGSFYKNHWPVVGRDVVQRCLAVLNHECSPISLNDTMIVLIPKIKAPRRVSDFRPISLCN----

Query:  ----------------SISSNQSAFVPDRCVVDNVILGFECIHELKCRSKGNSKWVALKLDMSKAYDRVEWSFLQRIMIRMGFTQQWVDLIMRCISSVSF
                         IS NQSAF  DR + DNV++ FE +H L  ++ G   ++A+KLDMSKA+DRVEW F+ ++M +MGF  +W DL+M+CI+SVS+
Subjt:  ----------------SISSNQSAFVPDRCVVDNVILGFECIHELKCRSKGNSKWVALKLDMSKAYDRVEWSFLQRIMIRMGFTQQWVDLIMRCISSVSF

Query:  SFNLNGEQLGHMVPSRGLRQGDPLSLYLFLLCVEGLSSLLRGAEQRSLISGFRIARSCPPMSHLFF
        S  +NG   G++ PSRGLRQGDPLS  LFLLC EGLS+L+  A +  LI+G  I R CP ++HLFF
Subjt:  SFNLNGEQLGHMVPSRGLRQGDPLSLYLFLLCVEGLSSLLRGAEQRSLISGFRIARSCPPMSHLFF

XP_023881891.1 uncharacterized protein LOC111994244 [Quercus suber]7.9e-6847.57Show/hide
Query:  SIDDVMNQSRLRPFSEEDILLALKQTHPHKAPGPDGLSGSFYKNHWPVVGRDVVQRCLAVLNHECSPISLNDTMIVLIPKIKAPRRVSDFRPISLCN---
        ++ + MN S ++ F+ E+I  AL Q HP KAPGPDG+S  F++ +W +VG D+V   L VLN   S + +N T I L+PKIK P ++SDFRPISLCN   
Subjt:  SIDDVMNQSRLRPFSEEDILLALKQTHPHKAPGPDGLSGSFYKNHWPVVGRDVVQRCLAVLNHECSPISLNDTMIVLIPKIKAPRRVSDFRPISLCN---

Query:  -----------------SISSNQSAFVPDRCVVDNVILGFECIHELKCRSKGNSKWVALKLDMSKAYDRVEWSFLQRIMIRMGFTQQWVDLIMRCISSVS
                          IS NQSAF+  R + DNV++ FE +H L+ + +G   + A+KLDMSKAYDRVEW F++++M +MGF ++W+ L+M CI+SVS
Subjt:  -----------------SISSNQSAFVPDRCVVDNVILGFECIHELKCRSKGNSKWVALKLDMSKAYDRVEWSFLQRIMIRMGFTQQWVDLIMRCISSVS

Query:  FSFNLNGEQLGHMVPSRGLRQGDPLSLYLFLLCVEGLSSLLRGAEQRSLISGFRIARSCPPMSHLFF
        +S  +NG   G + P+RGLRQGDP+S Y+FLLC +G SSLL    ++  ISG  I R CP ++HLFF
Subjt:  FSFNLNGEQLGHMVPSRGLRQGDPLSLYLFLLCVEGLSSLLRGAEQRSLISGFRIARSCPPMSHLFF

XP_023901742.1 uncharacterized protein LOC112013579 [Quercus suber]3.0e-6747.37Show/hide
Query:  IDDVMNQSRLRPFSEEDILLALKQTHPHKAPGPDGLSGSFYKNHWPVVGRDVVQRCLAVLNHECSPISLNDTMIVLIPKIKAPRRVSDFRPISLCNS---
        + D MN    + F+ E++L ALKQ HP KAPGPDG+S +F+ N+W +VG  +    L VLN       +N T I LIPK   P R+++FRPISLCN+   
Subjt:  IDDVMNQSRLRPFSEEDILLALKQTHPHKAPGPDGLSGSFYKNHWPVVGRDVVQRCLAVLNHECSPISLNDTMIVLIPKIKAPRRVSDFRPISLCNS---

Query:  -----------------ISSNQSAFVPDRCVVDNVILGFECIHELKCRSKGNSKWVALKLDMSKAYDRVEWSFLQRIMIRMGFTQQWVDLIMRCISSVSF
                         IS NQSAF P+R + DNV++ FE +H L  +++G   ++++KLDMSKA+DRVEWSF++ +M ++GF ++W+ LIM C+SSVS+
Subjt:  -----------------ISSNQSAFVPDRCVVDNVILGFECIHELKCRSKGNSKWVALKLDMSKAYDRVEWSFLQRIMIRMGFTQQWVDLIMRCISSVSF

Query:  SFNLNGEQLGHMVPSRGLRQGDPLSLYLFLLCVEGLSSLLRGAEQRSLISGFRIARSCPPMSHLFF
        S  +NGE  G++ PSRG+RQGDPLS  LFLLC EGLS+L+  A +   I+G  I R CP ++HLFF
Subjt:  SFNLNGEQLGHMVPSRGLRQGDPLSLYLFLLCVEGLSSLLRGAEQRSLISGFRIARSCPPMSHLFF

XP_030942886.1 uncharacterized protein LOC115967872 [Quercus lobata]1.0e-6748.09Show/hide
Query:  MNQSRLRPFSEEDILLALKQTHPHKAPGPDGLSGSFYKNHWPVVGRDVVQRCLAVLNHECSPISLNDTMIVLIPKIKAPRRVSDFRPISLCN--------
        MN    R F  E++++ALKQ HP K+PGPDG+S  F++ HW +VG +V    L VLN       +N T I L+PK   P+R++DFRPISLCN        
Subjt:  MNQSRLRPFSEEDILLALKQTHPHKAPGPDGLSGSFYKNHWPVVGRDVVQRCLAVLNHECSPISLNDTMIVLIPKIKAPRRVSDFRPISLCN--------

Query:  ------------SISSNQSAFVPDRCVVDNVILGFECIHELKCRSKGNSKWVALKLDMSKAYDRVEWSFLQRIMIRMGFTQQWVDLIMRCISSVSFSFNL
                     IS NQSAF+ DR + DNV++ +E +H LK +  GN  ++A K+DMSKA+D+VEW+F++++M RMGF + W+ L+M+ ISSVS+S  +
Subjt:  ------------SISSNQSAFVPDRCVVDNVILGFECIHELKCRSKGNSKWVALKLDMSKAYDRVEWSFLQRIMIRMGFTQQWVDLIMRCISSVSFSFNL

Query:  NGEQLGHMVPSRGLRQGDPLSLYLFLLCVEGLSSLLRGAEQRSLISGFRIARSCPPMSHLFF
        NG   GH++PSRGLRQGDPLSLYLFLLC EG S+L+  A + + ++G  I R  P +SHLFF
Subjt:  NGEQLGHMVPSRGLRQGDPLSLYLFLLCVEGLSSLLRGAEQRSLISGFRIARSCPPMSHLFF

TrEMBL top hitse value%identityAlignment
A0A2N9GB96 Uncharacterized protein9.0e-7048.52Show/hide
Query:  LHPSIDDVMNQSRLRPFSEEDILLALKQTHPHKAPGPDGLSGSFYKNHWPVVGRDVVQRCLAVLNHECSPISLNDTMIVLIPKIKAPRRVSDFRPISLCN
        ++PS+   MN    RP++E ++ +ALKQ  P KAPGPDG+  +FY+++W VVG++VVQ  L+ +N    P S+N T + LIPK+K P  V+++RPISLCN
Subjt:  LHPSIDDVMNQSRLRPFSEEDILLALKQTHPHKAPGPDGLSGSFYKNHWPVVGRDVVQRCLAVLNHECSPISLNDTMIVLIPKIKAPRRVSDFRPISLCN

Query:  --------------------SISSNQSAFVPDRCVVDNVILGFECIHELKCRSKGNSKWVALKLDMSKAYDRVEWSFLQRIMIRMGFTQQWVDLIMRCIS
                             I+  QSAFVP R + DNV++ FE +H +  + +G    +ALKLDMSKAYDRVEWSFL+++M++MGF  QWV L+M CI+
Subjt:  --------------------SISSNQSAFVPDRCVVDNVILGFECIHELKCRSKGNSKWVALKLDMSKAYDRVEWSFLQRIMIRMGFTQQWVDLIMRCIS

Query:  SVSFSFNLNGEQLGHMVPSRGLRQGDPLSLYLFLLCVEGLSSLLRGAEQRSLISGFRIARSCPPMSHLFF
        +VS+S  +NGE  GH+ PSRGLRQGDP+S YLFLLC EGL+ LL  A  +  I G  + R  P ++HLFF
Subjt:  SVSFSFNLNGEQLGHMVPSRGLRQGDPLSLYLFLLCVEGLSSLLRGAEQRSLISGFRIARSCPPMSHLFF

A0A2N9GLG8 Reverse transcriptase domain-containing protein9.0e-7048.52Show/hide
Query:  LHPSIDDVMNQSRLRPFSEEDILLALKQTHPHKAPGPDGLSGSFYKNHWPVVGRDVVQRCLAVLNHECSPISLNDTMIVLIPKIKAPRRVSDFRPISLCN
        ++PS+   MN    RP++E ++ +ALKQ  P KAPGPDG+  +FY+++W VVG++VVQ  L+ +N    P S+N T + LIPK+K P  V+++RPISLCN
Subjt:  LHPSIDDVMNQSRLRPFSEEDILLALKQTHPHKAPGPDGLSGSFYKNHWPVVGRDVVQRCLAVLNHECSPISLNDTMIVLIPKIKAPRRVSDFRPISLCN

Query:  --------------------SISSNQSAFVPDRCVVDNVILGFECIHELKCRSKGNSKWVALKLDMSKAYDRVEWSFLQRIMIRMGFTQQWVDLIMRCIS
                             I+  QSAFVP R + DNV++ FE +H +  + +G    +ALKLDMSKAYDRVEWSFL+++M++MGF  QWV L+M CI+
Subjt:  --------------------SISSNQSAFVPDRCVVDNVILGFECIHELKCRSKGNSKWVALKLDMSKAYDRVEWSFLQRIMIRMGFTQQWVDLIMRCIS

Query:  SVSFSFNLNGEQLGHMVPSRGLRQGDPLSLYLFLLCVEGLSSLLRGAEQRSLISGFRIARSCPPMSHLFF
        +VS+S  +NGE  GH+ PSRGLRQGDP+S YLFLLC EGL+ LL  A  +  I G  + R  P ++HLFF
Subjt:  SVSFSFNLNGEQLGHMVPSRGLRQGDPLSLYLFLLCVEGLSSLLRGAEQRSLISGFRIARSCPPMSHLFF

A0A2N9H0J9 Uncharacterized protein9.0e-7048.52Show/hide
Query:  LHPSIDDVMNQSRLRPFSEEDILLALKQTHPHKAPGPDGLSGSFYKNHWPVVGRDVVQRCLAVLNHECSPISLNDTMIVLIPKIKAPRRVSDFRPISLCN
        ++PS+   MN    RP++E ++ +ALKQ  P KAPGPDG+  +FY+++W VVG++VVQ  L+ +N    P S+N T + LIPK+K P  V+++RPISLCN
Subjt:  LHPSIDDVMNQSRLRPFSEEDILLALKQTHPHKAPGPDGLSGSFYKNHWPVVGRDVVQRCLAVLNHECSPISLNDTMIVLIPKIKAPRRVSDFRPISLCN

Query:  --------------------SISSNQSAFVPDRCVVDNVILGFECIHELKCRSKGNSKWVALKLDMSKAYDRVEWSFLQRIMIRMGFTQQWVDLIMRCIS
                             I+  QSAFVP R + DNV++ FE +H +  + +G    +ALKLDMSKAYDRVEWSFL+++M++MGF  QWV L+M CI+
Subjt:  --------------------SISSNQSAFVPDRCVVDNVILGFECIHELKCRSKGNSKWVALKLDMSKAYDRVEWSFLQRIMIRMGFTQQWVDLIMRCIS

Query:  SVSFSFNLNGEQLGHMVPSRGLRQGDPLSLYLFLLCVEGLSSLLRGAEQRSLISGFRIARSCPPMSHLFF
        +VS+S  +NGE  GH+ PSRGLRQGDP+S YLFLLC EGL+ LL  A  +  I G  + R  P ++HLFF
Subjt:  SVSFSFNLNGEQLGHMVPSRGLRQGDPLSLYLFLLCVEGLSSLLRGAEQRSLISGFRIARSCPPMSHLFF

A0A2N9I509 Uncharacterized protein6.9e-7051.28Show/hide
Query:  MQDLHPSIDDVMNQSRLRPFSEEDILLALKQTHPHKAPGPDGLSGSFYKNHWPVVGRDVVQRCLAVLNHECSPISLNDTMIVLIPKIKAPRRVSDFRPIS
        +Q +   +   MN   LRPFS E+I  AL Q HP KAPGPDG++  F++  W VVG DV    L  L+  C   ++N T IVLIPK+KAP R+S FRPIS
Subjt:  MQDLHPSIDDVMNQSRLRPFSEEDILLALKQTHPHKAPGPDGLSGSFYKNHWPVVGRDVVQRCLAVLNHECSPISLNDTMIVLIPKIKAPRRVSDFRPIS

Query:  LCN--------------------SISSNQSAFVPDRCVVDNVILGFECIHELKCRSKGNSKWVALKLDMSKAYDRVEWSFLQRIMIRMGFTQQWVDLIMR
        LCN                     IS +QSAFVP R + DNVI+ FE +H LK    G +  +A KLDMSKAYDRVEWS+L+ I++++GF  +WV L+M 
Subjt:  LCN--------------------SISSNQSAFVPDRCVVDNVILGFECIHELKCRSKGNSKWVALKLDMSKAYDRVEWSFLQRIMIRMGFTQQWVDLIMR

Query:  CISSVSFSFNLNGEQLGHMVPSRGLRQGDPLSLYLFLLCVEGLSSLLRGAEQRSLISGFRIARSCPPMSHLFF
        C++S S+S  +NGE  G+++PSRGLRQGDPLS YLFL+C EGLS+L+R AE+ SLI G  I R+ P +SHLFF
Subjt:  CISSVSFSFNLNGEQLGHMVPSRGLRQGDPLSLYLFLLCVEGLSSLLRGAEQRSLISGFRIARSCPPMSHLFF

A0A7N2L6Z9 Reverse transcriptase domain-containing protein5.3e-7050.38Show/hide
Query:  IDDVMNQSRLRPFSEEDILLALKQTHPHKAPGPDGLSGSFYKNHWPVVGRDVVQRCLAVLNHECSPISLNDTMIVLIPKIKAPRRVSDFRPISLCN----
        I + MN    R F+ E+I+ ALKQ HP K+PGPDG+S  F++ +W +VG +V    L VLN+  S   +N T IVLIPK   P+R++DFRPISLCN    
Subjt:  IDDVMNQSRLRPFSEEDILLALKQTHPHKAPGPDGLSGSFYKNHWPVVGRDVVQRCLAVLNHECSPISLNDTMIVLIPKIKAPRRVSDFRPISLCN----

Query:  ----------------SISSNQSAFVPDRCVVDNVILGFECIHELKCRSKGNSKWVALKLDMSKAYDRVEWSFLQRIMIRMGFTQQWVDLIMRCISSVSF
                         I+ NQSAF  DR + DNV++ +E +H LK +  G   ++A KLDMSKA+DRVEW F++R+M +MGF + W+ LIMRCISSVS+
Subjt:  ----------------SISSNQSAFVPDRCVVDNVILGFECIHELKCRSKGNSKWVALKLDMSKAYDRVEWSFLQRIMIRMGFTQQWVDLIMRCISSVSF

Query:  SFNLNGEQLGHMVPSRGLRQGDPLSLYLFLLCVEGLSSLLRGAEQRSLISGFRIARSCPPMSHLFF
        S  +NGE  G++VP+RGLRQGDPLS YLFLLC EGLS+LL  A +  L++G  + R CP ++HLFF
Subjt:  SFNLNGEQLGHMVPSRGLRQGDPLSLYLFLLCVEGLSSLLRGAEQRSLISGFRIARSCPPMSHLFF

SwissProt top hitse value%identityAlignment
O00370 LINE-1 retrotransposable element ORF2 protein3.0e-1423.94Show/hide
Query:  PSIDDVMNQSRLRPFSEEDILLALKQTHPHKAPGPDGLSGSFYKNHWPVVGRDVVQRCLAVLNHECSPISLNDTMIVLIPKI-KAPRRVSDFRPISLCN-
        P ++    +S  RP +  +I+  +      K+PGPDG +  FY+ +   +   +++   ++      P S  +  I+LIPK  +   +  +FRPISL N 
Subjt:  PSIDDVMNQSRLRPFSEEDILLALKQTHPHKAPGPDGLSGSFYKNHWPVVGRDVVQRCLAVLNHECSPISLNDTMIVLIPKI-KAPRRVSDFRPISLCN-

Query:  -------------------SISSNQSAFVPDRCVVDNVILGFECIHELKCRSKGNSKWVALKLDMSKAYDRVEWSFLQRIMIRMGFTQQWVDLIMRCISS
                            I  +Q  F+P      N+      I  +  R+K +   V + +D  KA+D+++  F+ + + ++G    ++ +I      
Subjt:  -------------------SISSNQSAFVPDRCVVDNVILGFECIHELKCRSKGNSKWVALKLDMSKAYDRVEWSFLQRIMIRMGFTQQWVDLIMRCISS

Query:  VSFSFNLNGEQLGHMVPSRGLRQGDPLSLYLFLLCVEGLSSLLRGAEQRSLISGFRIAR
         + +  LNG++L       G RQG PLS  LF + +E L+  +R   Q   I G ++ +
Subjt:  VSFSFNLNGEQLGHMVPSRGLRQGDPLSLYLFLLCVEGLSSLLRGAEQRSLISGFRIAR

P08548 LINE-1 reverse transcriptase homolog2.0e-1326.12Show/hide
Query:  RPFSEEDILLALKQTHPHKAPGPDGLSGSFYKNHWPVVGRDVVQRCLAVLNHECSPISLNDTMIVLIPKI-KAPRRVSDFRPISLCN-------------
        RP S  +I   ++     K+PGPDG +  FY+     +   ++     +      P +  +  I LIPK  K P R  ++RPISL N             
Subjt:  RPFSEEDILLALKQTHPHKAPGPDGLSGSFYKNHWPVVGRDVVQRCLAVLNHECSPISLNDTMIVLIPKI-KAPRRVSDFRPISLCN-------------

Query:  -------SISSNQSAFVPDRCVVDNVILGFECIHELKCRSKGNSKWVALKLDMSKAYDRVEWSFLQRIMIRMGFTQQWVDLIMRCISSVSFSFNLNGEQL
                I  +Q  F+P      N+      I  +      N   + L +D  KA+D ++  F+ R + ++G    ++ LI    S  + +  LNG +L
Subjt:  -------SISSNQSAFVPDRCVVDNVILGFECIHELKCRSKGNSKWVALKLDMSKAYDRVEWSFLQRIMIRMGFTQQWVDLIMRCISSVSFSFNLNGEQL

Query:  GHMVPSRGLRQGDPLSLYLFLLCVEGLSSLLRGAEQRSLISGFRI
               G RQG PLS  LF + +E L+  +R   +   I G  I
Subjt:  GHMVPSRGLRQGDPLSLYLFLLCVEGLSSLLRGAEQRSLISGFRI

P11369 LINE-1 retrotransposable element ORF2 protein3.8e-1728.17Show/hide
Query:  PFSEEDILLALKQTHPHKAPGPDGLSGSFYKNHWPVVGRDVVQRCLAVLNHECS-----PISLNDTMIVLIPK-IKAPRRVSDFRPISLCN---------
        P S ++I   +      K+PGPDG S  FY+       ++ +   L  L H+       P S  +  I LIPK  K P ++ +FRPISL N         
Subjt:  PFSEEDILLALKQTHPHKAPGPDGLSGSFYKNHWPVVGRDVVQRCLAVLNHECS-----PISLNDTMIVLIPK-IKAPRRVSDFRPISLCN---------

Query:  -----------SISSNQSAFVPDRCVVDNVILGFECIHEL-KCRSKGNSKWVALKLDMSKAYDRVEWSFLQRIMIRMGFTQQWVDLIMRCISSVSFSFNL
                    I  +Q  F+P      N+      IH + K + K +   + + LD  KA+D+++  F+ +++ R G    ++++I    S    +  +
Subjt:  -----------SISSNQSAFVPDRCVVDNVILGFECIHEL-KCRSKGNSKWVALKLDMSKAYDRVEWSFLQRIMIRMGFTQQWVDLIMRCISSVSFSFNL

Query:  NGEQLGHMVPSRGLRQGDPLSLYLFLLCVEGLSSLLRGAEQRSLISGFRIAR
        NGE+L  +    G RQG PLS YLF + +E L+  +R   Q+  I G +I +
Subjt:  NGEQLGHMVPSRGLRQGDPLSLYLFLLCVEGLSSLLRGAEQRSLISGFRIAR

P14381 Transposon TX1 uncharacterized 149 kDa protein4.2e-1625.93Show/hide
Query:  PSIDDVMNQSRLRPFSEEDILLALKQTHPHKAPGPDGLSGSFYKNHWPVVGRDVVQRCLAVLNHECSPISLNDTMIVLIPKIKAPRRVSDFRPISLCNS-
        P + +   +    P + +++  AL+    +K+PG DGL+  F++  W  +G D  +           P+S    ++ L+PK    R + ++RP+SL ++ 
Subjt:  PSIDDVMNQSRLRPFSEEDILLALKQTHPHKAPGPDGLSGSFYKNHWPVVGRDVVQRCLAVLNHECSPISLNDTMIVLIPKIKAPRRVSDFRPISLCNS-

Query:  -------------------ISSNQSAFVPDRCVVDNVILGFECIHELKCRSKGNSKWVALKLDMSKAYDRVEWSFLQRIMIRMGFTQQWVDLIMRCISSV
                           I  +QS  VP R + DNV L  + +H  +   +       L LD  KA+DRV+  +L   +    F  Q+V  +    +S 
Subjt:  -------------------ISSNQSAFVPDRCVVDNVILGFECIHELKCRSKGNSKWVALKLDMSKAYDRVEWSFLQRIMIRMGFTQQWVDLIMRCISSV

Query:  SFSFNLNGEQLGHMVPSRGLRQGDPLSLYLFLLCVEGLSSLLR
             +N      +   RG+RQG PLS  L+ L +E    LLR
Subjt:  SFSFNLNGEQLGHMVPSRGLRQGDPLSLYLFLLCVEGLSSLLR

P92555 Uncharacterized mitochondrial protein AtMg012506.3e-1250.77Show/hide
Query:  FNLNGEQLGHMVPSRGLRQGDPLSLYLFLLCVEGLSSLLRGAEQRSLISGFRIARSCPPMSHLFF
        F +NG   G + PSRGLRQGDPLS YLF+LC E LS L R A+++  + G R++ + P ++HL F
Subjt:  FNLNGEQLGHMVPSRGLRQGDPLSLYLFLLCVEGLSSLLRGAEQRSLISGFRIARSCPPMSHLFF

Arabidopsis top hitse value%identityAlignment
AT4G20520.1 RNA binding;RNA-directed DNA polymerases1.0e-1237.5Show/hide
Query:  VSDFRPISLCNSISSNQSAFVPDRCVVDNVILGFECIHELKCRSKGNSKWVALKLDMSKAYDRVEWSFLQRIMIRMGFTQQWVDLIMR
        V   +P+ + N I   Q++F+P R   DN++   E +H ++ R KG   W+ LKLD+ KAYDR+ W +L+  +I  GF + W+  I R
Subjt:  VSDFRPISLCNSISSNQSAFVPDRCVVDNVILGFECIHELKCRSKGNSKWVALKLDMSKAYDRVEWSFLQRIMIRMGFTQQWVDLIMR

ATMG01250.1 RNA-directed DNA polymerase (reverse transcriptase)4.5e-1350.77Show/hide
Query:  FNLNGEQLGHMVPSRGLRQGDPLSLYLFLLCVEGLSSLLRGAEQRSLISGFRIARSCPPMSHLFF
        F +NG   G + PSRGLRQGDPLS YLF+LC E LS L R A+++  + G R++ + P ++HL F
Subjt:  FNLNGEQLGHMVPSRGLRQGDPLSLYLFLLCVEGLSSLLRGAEQRSLISGFRIARSCPPMSHLFF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAGACCTTCACCCTTCTATCGATGATGTTATGAATCAGTCTCGATTGCGTCCATTCTCTGAGGAGGATATTCTTTTGGCTTTGAAACAAACACACCCTCATAAGGC
CCCAGGTCCAGATGGTTTGTCTGGTAGTTTCTACAAGAACCATTGGCCGGTTGTAGGTCGAGACGTTGTTCAAAGATGTTTGGCTGTTTTAAATCATGAATGTTCCCCTA
TCTCCCTGAATGATACCATGATCGTACTCATTCCAAAAATCAAGGCTCCTCGTCGAGTGTCTGACTTTAGGCCTATTTCACTCTGTAATTCTATCTCATCGAACCAAAGT
GCCTTTGTTCCAGATCGGTGTGTGGTGGATAATGTCATCTTGGGATTTGAGTGTATCCATGAGCTAAAGTGTCGGTCGAAGGGGAATTCTAAGTGGGTTGCTTTGAAACT
TGATATGAGCAAGGCTTATGATAGGGTGGAGTGGTCTTTCCTTCAGAGGATTATGATTCGCATGGGTTTTACTCAGCAGTGGGTTGACCTGATTATGCGGTGTATTAGTT
CGGTTTCTTTCTCCTTTAACCTGAATGGGGAGCAGTTGGGACATATGGTTCCATCCAGGGGTCTTCGGCAAGGGGATCCTCTATCTCTCTATCTCTTTTTGCTCTGTGTT
GAGGGATTATCTAGTCTGTTGCGTGGGGCTGAGCAACGATCGCTTATATCGGGGTTTCGGATAGCTCGGTCTTGTCCGCCAATGTCGCATTTGTTTTTTTGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGCAAGACCTTCACCCTTCTATCGATGATGTTATGAATCAGTCTCGATTGCGTCCATTCTCTGAGGAGGATATTCTTTTGGCTTTGAAACAAACACACCCTCATAAGGC
CCCAGGTCCAGATGGTTTGTCTGGTAGTTTCTACAAGAACCATTGGCCGGTTGTAGGTCGAGACGTTGTTCAAAGATGTTTGGCTGTTTTAAATCATGAATGTTCCCCTA
TCTCCCTGAATGATACCATGATCGTACTCATTCCAAAAATCAAGGCTCCTCGTCGAGTGTCTGACTTTAGGCCTATTTCACTCTGTAATTCTATCTCATCGAACCAAAGT
GCCTTTGTTCCAGATCGGTGTGTGGTGGATAATGTCATCTTGGGATTTGAGTGTATCCATGAGCTAAAGTGTCGGTCGAAGGGGAATTCTAAGTGGGTTGCTTTGAAACT
TGATATGAGCAAGGCTTATGATAGGGTGGAGTGGTCTTTCCTTCAGAGGATTATGATTCGCATGGGTTTTACTCAGCAGTGGGTTGACCTGATTATGCGGTGTATTAGTT
CGGTTTCTTTCTCCTTTAACCTGAATGGGGAGCAGTTGGGACATATGGTTCCATCCAGGGGTCTTCGGCAAGGGGATCCTCTATCTCTCTATCTCTTTTTGCTCTGTGTT
GAGGGATTATCTAGTCTGTTGCGTGGGGCTGAGCAACGATCGCTTATATCGGGGTTTCGGATAGCTCGGTCTTGTCCGCCAATGTCGCATTTGTTTTTTTGCTGA
Protein sequenceShow/hide protein sequence
MQDLHPSIDDVMNQSRLRPFSEEDILLALKQTHPHKAPGPDGLSGSFYKNHWPVVGRDVVQRCLAVLNHECSPISLNDTMIVLIPKIKAPRRVSDFRPISLCNSISSNQS
AFVPDRCVVDNVILGFECIHELKCRSKGNSKWVALKLDMSKAYDRVEWSFLQRIMIRMGFTQQWVDLIMRCISSVSFSFNLNGEQLGHMVPSRGLRQGDPLSLYLFLLCV
EGLSSLLRGAEQRSLISGFRIARSCPPMSHLFFC