; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0018986 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0018986
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionATP-dependent RNA helicase DEAH12, chloroplastic-like
Genome locationchr5:37369614..37371761
RNA-Seq ExpressionLag0018986
SyntenyLag0018986
Gene Ontology termsGO:0000209 - protein polyubiquitination (biological process)
GO:0032436 - positive regulation of proteasomal ubiquitin-dependent protein catabolic process (biological process)
GO:0032259 - methylation (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0000151 - ubiquitin ligase complex (cellular component)
GO:0061630 - ubiquitin protein ligase activity (molecular function)
GO:0003724 - RNA helicase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
GO:0003723 - RNA binding (molecular function)
GO:0031624 - ubiquitin conjugating enzyme binding (molecular function)
GO:0016787 - hydrolase activity (molecular function)
GO:0008168 - methyltransferase activity (molecular function)
GO:0005524 - ATP binding (molecular function)
InterPro domainsIPR044066 - TRIAD supradomain
IPR031127 - E3 ubiquitin ligase RBR family
IPR029063 - S-adenosyl-L-methionine-dependent methyltransferase
IPR017907 - Zinc finger, RING-type, conserved site
IPR013083 - Zinc finger, RING/FYVE/PHD-type
IPR002877 - Ribosomal RNA methyltransferase FtsJ domain
IPR002867 - IBR domain
IPR001841 - Zinc finger, RING-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022136524.1 ATP-dependent RNA helicase DEAH12, chloroplastic-like [Momordica charantia]2.7e-11988.89Show/hide
Query:  GGSAERSNDADACPICLCDIEDDRFELEACGHHFCRLCLVEQFESAIKNQGSFPVCCAKQTCRSPILLTDMRSLLSSEKIEELFRASLGAFVASSDGAYR
        GGSA+R +DADACPICLCDIEDD+FELE CGHHFCR CLVEQFESAIKNQGSFPVCCA+QTCRSPILL DM+SLLS EK+EELFRASLGAFVASS+GAYR
Subjt:  GGSAERSNDADACPICLCDIEDDRFELEACGHHFCRLCLVEQFESAIKNQGSFPVCCAKQTCRSPILLTDMRSLLSSEKIEELFRASLGAFVASSDGAYR

Query:  FCPSPDCPSVYRVASPDTSGEPFMCGACYSETCTRCHLEYHPFLSCEQYQVFKEDPDSSLNEWRKDKENVKNCPVCGYTIEKIDGCNHIECRCGRHICWV
        FCPSPDCPS+Y+VA P+T GEPF+CGACYSETCT+CHLEYHPFLSC+QY+VFKEDPDSSLNEWRKDKENVKNCPVCGYTIEK+DGCNHIEC+CGRHICWV
Subjt:  FCPSPDCPSVYRVASPDTSGEPFMCGACYSETCTRCHLEYHPFLSCEQYQVFKEDPDSSLNEWRKDKENVKNCPVCGYTIEKIDGCNHIECRCGRHICWV

Query:  CLEYFDSSDECYGHLR
        CLEYF SSDECYGHLR
Subjt:  CLEYFDSSDECYGHLR

XP_022943236.1 ATP-dependent RNA helicase DEAH12, chloroplastic-like [Cucurbita moschata]2.8e-11689.4Show/hide
Query:  SGGSAERSNDADACPICLCDIEDDRFELEACGHHFCRLCLVEQFESAIKNQGSFPVCCAKQTCRSPILLTDMRSLLSSEKIEELFRASLGAFVASSDGAY
        SGG AER +DADAC ICLCDIEDDRFELEACGHHFCR CLVEQFESAIKN GSFPVCCAKQTC+SPILLTDMR LLS+EK+EELFRASLGAFVA  D AY
Subjt:  SGGSAERSNDADACPICLCDIEDDRFELEACGHHFCRLCLVEQFESAIKNQGSFPVCCAKQTCRSPILLTDMRSLLSSEKIEELFRASLGAFVASSDGAY

Query:  RFCPSPDCPSVYRVASPDTSGEPFMCGACYSETCTRCHLEYHPFLSCEQYQVFKEDPDSSLNEWRKDKENVKNCPVCGYTIEKIDGCNHIECRCGRHICW
        RFCPSPDCPSVYRVASPDT GEPFMCGAC+SETCTRCHLEYHPFLSCEQY+VFKEDPDSSL+EWRK KENVKNCP CGYTIEKI+GCNHIEC+CGRHICW
Subjt:  RFCPSPDCPSVYRVASPDTSGEPFMCGACYSETCTRCHLEYHPFLSCEQYQVFKEDPDSSLNEWRKDKENVKNCPVCGYTIEKIDGCNHIECRCGRHICW

Query:  VCLEYFDSSDECYGHLR
        VCL+YF SSDECYGHLR
Subjt:  VCLEYFDSSDECYGHLR

XP_022969963.1 ATP-dependent RNA helicase DEAH12, chloroplastic-like [Cucurbita maxima]2.1e-11689.4Show/hide
Query:  SGGSAERSNDADACPICLCDIEDDRFELEACGHHFCRLCLVEQFESAIKNQGSFPVCCAKQTCRSPILLTDMRSLLSSEKIEELFRASLGAFVASSDGAY
        SGG AER +DADAC ICLCDIEDDRFELEACGHHFCR CLVEQFESAIKN GSFPVCCAKQTC+SPILLTDMR LLS+EK+EELFRASLGAFVA  D AY
Subjt:  SGGSAERSNDADACPICLCDIEDDRFELEACGHHFCRLCLVEQFESAIKNQGSFPVCCAKQTCRSPILLTDMRSLLSSEKIEELFRASLGAFVASSDGAY

Query:  RFCPSPDCPSVYRVASPDTSGEPFMCGACYSETCTRCHLEYHPFLSCEQYQVFKEDPDSSLNEWRKDKENVKNCPVCGYTIEKIDGCNHIECRCGRHICW
        RFCPSPDCPSVYRVASPDT GEPFMCGAC+SETCTRCHLEYHPFLSCEQY+VFKEDPDSSL+EWRK +ENVKNCPVCGYTIEKI+GCNHIEC+CGRHICW
Subjt:  RFCPSPDCPSVYRVASPDTSGEPFMCGACYSETCTRCHLEYHPFLSCEQYQVFKEDPDSSLNEWRKDKENVKNCPVCGYTIEKIDGCNHIECRCGRHICW

Query:  VCLEYFDSSDECYGHLR
        VCL+YF SSDECYGHLR
Subjt:  VCLEYFDSSDECYGHLR

XP_023531305.1 ATP-dependent RNA helicase DEAH12, chloroplastic-like [Cucurbita pepo subsp. pepo]9.6e-11789.86Show/hide
Query:  SGGSAERSNDADACPICLCDIEDDRFELEACGHHFCRLCLVEQFESAIKNQGSFPVCCAKQTCRSPILLTDMRSLLSSEKIEELFRASLGAFVASSDGAY
        SGG AER +DADAC ICLCDIEDDRFELEACGHHFCR CLVEQFESAIKN GSFPVCCAKQTC+SPILLTDMR LLS+EK+EELFRASLGAFVA  D AY
Subjt:  SGGSAERSNDADACPICLCDIEDDRFELEACGHHFCRLCLVEQFESAIKNQGSFPVCCAKQTCRSPILLTDMRSLLSSEKIEELFRASLGAFVASSDGAY

Query:  RFCPSPDCPSVYRVASPDTSGEPFMCGACYSETCTRCHLEYHPFLSCEQYQVFKEDPDSSLNEWRKDKENVKNCPVCGYTIEKIDGCNHIECRCGRHICW
        RFCPSPDCPSVYRVASPDT GEPFMCGAC+SETCTRCHLEYHPFLSCEQY+VFKEDPDSSL+EWRK KENVKNCPVCGYTIEKI+GCNHIEC+CGRHICW
Subjt:  RFCPSPDCPSVYRVASPDTSGEPFMCGACYSETCTRCHLEYHPFLSCEQYQVFKEDPDSSLNEWRKDKENVKNCPVCGYTIEKIDGCNHIECRCGRHICW

Query:  VCLEYFDSSDECYGHLR
        VCL+YF SSDECYGHLR
Subjt:  VCLEYFDSSDECYGHLR

XP_038905605.1 ATP-dependent RNA helicase DEAH12, chloroplastic-like [Benincasa hispida]9.6e-11788.53Show/hide
Query:  MSGGSAERSNDADACPICLCDIEDDRFELEACGHHFCRLCLVEQFESAIKNQGSFPVCCAKQTCRSPILLTDMRSLLSSEKIEELFRASLGAFVASSDGA
        MSGGS ER++DADACPICLCDIEDDRFELEACGHHFCR CLVEQFESAIKNQG FPVCCAKQ C SPILL DMR+LLSSEK+EELFRASLGAFVASS+GA
Subjt:  MSGGSAERSNDADACPICLCDIEDDRFELEACGHHFCRLCLVEQFESAIKNQGSFPVCCAKQTCRSPILLTDMRSLLSSEKIEELFRASLGAFVASSDGA

Query:  YRFCPSPDCPSVYRVASPDTSGEPFMCGACYSETCTRCHLEYHPFLSCEQYQVFKEDPDSSLNEWRKDKENVKNCPVCGYTIEKIDGCNHIECRCGRHIC
        YRFCPSPDCPSVYRVAS D SG  F+CGACYSETC RCHLEYHPFLSCEQY+VFKEDPDSSLNEWRKD+ENVKNCPVCGYTIEK+DGCNH+EC+CGRHIC
Subjt:  YRFCPSPDCPSVYRVASPDTSGEPFMCGACYSETCTRCHLEYHPFLSCEQYQVFKEDPDSSLNEWRKDKENVKNCPVCGYTIEKIDGCNHIECRCGRHIC

Query:  WVCLEYFDSSDECYGHLR
        WVCLE+F SSDECY HLR
Subjt:  WVCLEYFDSSDECYGHLR

TrEMBL top hitse value%identityAlignment
A0A0A0KVR7 Uncharacterized protein2.6e-11586.18Show/hide
Query:  MSGGSAERSNDADACPICLCDIEDDRFELEACGHHFCRLCLVEQFESAIKNQGSFPVCCAKQTCRSPILLTDMRSLLSSEKIEELFRASLGAFVASSDGA
        +SGGS ER +DAD CPICLCDIEDDRFELE CGHHFCR CLVEQFESAIKNQG FP+CCAKQ C +PI+L DMR+LLSSEK+EELFRASLGAF+ASSDGA
Subjt:  MSGGSAERSNDADACPICLCDIEDDRFELEACGHHFCRLCLVEQFESAIKNQGSFPVCCAKQTCRSPILLTDMRSLLSSEKIEELFRASLGAFVASSDGA

Query:  YRFCPSPDCPSVYRVASPDTSGEPFMCGACYSETCTRCHLEYHPFLSCEQYQVFKEDPDSSLNEWRKDKENVKNCPVCGYTIEKIDGCNHIECRCGRHIC
        YRFCPSPDCPSVYRVA PD  GEPF+CGACYSETC RCHLEYHPFLSCEQY+VFKEDPDSSL EWRK KENVKNCPVCGYTIEK +GCNH+ECRCGRHIC
Subjt:  YRFCPSPDCPSVYRVASPDTSGEPFMCGACYSETCTRCHLEYHPFLSCEQYQVFKEDPDSSLNEWRKDKENVKNCPVCGYTIEKIDGCNHIECRCGRHIC

Query:  WVCLEYFDSSDECYGHL
        WVCLEYF SSDECY HL
Subjt:  WVCLEYFDSSDECYGHL

A0A5D3BD53 ATP-dependent RNA helicase DEAH122.8e-11486.64Show/hide
Query:  MSGGSAERSNDADACPICLCDIEDDRFELEACGHHFCRLCLVEQFESAIKNQGSFPVCCAKQTCRSPILLTDMRSLLSSEKIEELFRASLGAFVASSDGA
        MSGGS ER +DAD CPICLCDIEDDRFELEACG HFCR CLVEQFESAIKNQG FPVCCAKQ C +PI+L DMR+LLSSEK+EELFRASLGAF+ASSDGA
Subjt:  MSGGSAERSNDADACPICLCDIEDDRFELEACGHHFCRLCLVEQFESAIKNQGSFPVCCAKQTCRSPILLTDMRSLLSSEKIEELFRASLGAFVASSDGA

Query:  YRFCPSPDCPSVYRVASPDTSGEPFMCGACYSETCTRCHLEYHPFLSCEQYQVFKEDPDSSLNEWRKDKENVKNCPVCGYTIEKIDGCNHIECRCGRHIC
        YRFCPSPDCPSVYRVA P+  GEPFMC ACYSETC RCHLEYHPFLSCEQY+VFKEDPDSSL EWRK KENVKNCPVCGYTIEK +GCNH+ECRCGRHIC
Subjt:  YRFCPSPDCPSVYRVASPDTSGEPFMCGACYSETCTRCHLEYHPFLSCEQYQVFKEDPDSSLNEWRKDKENVKNCPVCGYTIEKIDGCNHIECRCGRHIC

Query:  WVCLEYFDSSDECYGHL
        WVCLEYF SSDECY HL
Subjt:  WVCLEYFDSSDECYGHL

A0A6J1C4J5 ATP-dependent RNA helicase DEAH12, chloroplastic-like1.3e-11988.89Show/hide
Query:  GGSAERSNDADACPICLCDIEDDRFELEACGHHFCRLCLVEQFESAIKNQGSFPVCCAKQTCRSPILLTDMRSLLSSEKIEELFRASLGAFVASSDGAYR
        GGSA+R +DADACPICLCDIEDD+FELE CGHHFCR CLVEQFESAIKNQGSFPVCCA+QTCRSPILL DM+SLLS EK+EELFRASLGAFVASS+GAYR
Subjt:  GGSAERSNDADACPICLCDIEDDRFELEACGHHFCRLCLVEQFESAIKNQGSFPVCCAKQTCRSPILLTDMRSLLSSEKIEELFRASLGAFVASSDGAYR

Query:  FCPSPDCPSVYRVASPDTSGEPFMCGACYSETCTRCHLEYHPFLSCEQYQVFKEDPDSSLNEWRKDKENVKNCPVCGYTIEKIDGCNHIECRCGRHICWV
        FCPSPDCPS+Y+VA P+T GEPF+CGACYSETCT+CHLEYHPFLSC+QY+VFKEDPDSSLNEWRKDKENVKNCPVCGYTIEK+DGCNHIEC+CGRHICWV
Subjt:  FCPSPDCPSVYRVASPDTSGEPFMCGACYSETCTRCHLEYHPFLSCEQYQVFKEDPDSSLNEWRKDKENVKNCPVCGYTIEKIDGCNHIECRCGRHICWV

Query:  CLEYFDSSDECYGHLR
        CLEYF SSDECYGHLR
Subjt:  CLEYFDSSDECYGHLR

A0A6J1FR66 ATP-dependent RNA helicase DEAH12, chloroplastic-like1.4e-11689.4Show/hide
Query:  SGGSAERSNDADACPICLCDIEDDRFELEACGHHFCRLCLVEQFESAIKNQGSFPVCCAKQTCRSPILLTDMRSLLSSEKIEELFRASLGAFVASSDGAY
        SGG AER +DADAC ICLCDIEDDRFELEACGHHFCR CLVEQFESAIKN GSFPVCCAKQTC+SPILLTDMR LLS+EK+EELFRASLGAFVA  D AY
Subjt:  SGGSAERSNDADACPICLCDIEDDRFELEACGHHFCRLCLVEQFESAIKNQGSFPVCCAKQTCRSPILLTDMRSLLSSEKIEELFRASLGAFVASSDGAY

Query:  RFCPSPDCPSVYRVASPDTSGEPFMCGACYSETCTRCHLEYHPFLSCEQYQVFKEDPDSSLNEWRKDKENVKNCPVCGYTIEKIDGCNHIECRCGRHICW
        RFCPSPDCPSVYRVASPDT GEPFMCGAC+SETCTRCHLEYHPFLSCEQY+VFKEDPDSSL+EWRK KENVKNCP CGYTIEKI+GCNHIEC+CGRHICW
Subjt:  RFCPSPDCPSVYRVASPDTSGEPFMCGACYSETCTRCHLEYHPFLSCEQYQVFKEDPDSSLNEWRKDKENVKNCPVCGYTIEKIDGCNHIECRCGRHICW

Query:  VCLEYFDSSDECYGHLR
        VCL+YF SSDECYGHLR
Subjt:  VCLEYFDSSDECYGHLR

A0A6J1I2G6 ATP-dependent RNA helicase DEAH12, chloroplastic-like1.0e-11689.4Show/hide
Query:  SGGSAERSNDADACPICLCDIEDDRFELEACGHHFCRLCLVEQFESAIKNQGSFPVCCAKQTCRSPILLTDMRSLLSSEKIEELFRASLGAFVASSDGAY
        SGG AER +DADAC ICLCDIEDDRFELEACGHHFCR CLVEQFESAIKN GSFPVCCAKQTC+SPILLTDMR LLS+EK+EELFRASLGAFVA  D AY
Subjt:  SGGSAERSNDADACPICLCDIEDDRFELEACGHHFCRLCLVEQFESAIKNQGSFPVCCAKQTCRSPILLTDMRSLLSSEKIEELFRASLGAFVASSDGAY

Query:  RFCPSPDCPSVYRVASPDTSGEPFMCGACYSETCTRCHLEYHPFLSCEQYQVFKEDPDSSLNEWRKDKENVKNCPVCGYTIEKIDGCNHIECRCGRHICW
        RFCPSPDCPSVYRVASPDT GEPFMCGAC+SETCTRCHLEYHPFLSCEQY+VFKEDPDSSL+EWRK +ENVKNCPVCGYTIEKI+GCNHIEC+CGRHICW
Subjt:  RFCPSPDCPSVYRVASPDTSGEPFMCGACYSETCTRCHLEYHPFLSCEQYQVFKEDPDSSLNEWRKDKENVKNCPVCGYTIEKIDGCNHIECRCGRHICW

Query:  VCLEYFDSSDECYGHLR
        VCL+YF SSDECYGHLR
Subjt:  VCLEYFDSSDECYGHLR

SwissProt top hitse value%identityAlignment
A2VEA3 E3 ubiquitin-protein ligase ARIH12.5e-1930.1Show/hide
Query:  CPICLCDIEDDRFELEACGHHFCRLCLVEQFESAIKNQG-SFPVCCAKQTCRSPILLTDMRSLLSSEKIEELFRASLGAFVASSDGAYRFCPSPDCPSVY
        C IC  +  +  F    CGH FC  C  E   + I  +G    + C    C   +    +  L++  K++  ++  +       +   ++CP+PDC  V 
Subjt:  CPICLCDIEDDRFELEACGHHFCRLCLVEQFESAIKNQG-SFPVCCAKQTCRSPILLTDMRSLLSSEKIEELFRASLGAFVASSDGAYRFCPSPDCPSVY

Query:  RVASPDTSGEPFMCGACYSETCTRCHLEYHPFLSCEQYQ--VFKEDPDSSLNEWRKDKENVKNCPVCGYTIEKIDGCNHIECR---CGRHICWVCL
        +V  PD   +P  C  C  + C  C   +H  + C+  +  + K D DS  + W     N K CP C  TIEK  GCNH+ CR   C    CWVCL
Subjt:  RVASPDTSGEPFMCGACYSETCTRCHLEYHPFLSCEQYQ--VFKEDPDSSLNEWRKDKENVKNCPVCGYTIEKIDGCNHIECR---CGRHICWVCL

F4KGU4 ATP-dependent RNA helicase DEAH12, chloroplastic2.2e-7961.76Show/hide
Query:  CPICLCDIEDDRFELEACGHHFCRLCLVEQFESAIKNQGSFPVCCAKQTCRSPILLTDMRSLLSSEKIEELFRASLGAFVASSDGAYRFCPSPDCPSVYR
        CPICL ++ DD + LE C H FC+ CL+EQFE++++N  +FP+ C+   C +PI+L DMR+LLS EK++ELF ASL +FV SSDG +RFC +PDCPSVYR
Subjt:  CPICLCDIEDDRFELEACGHHFCRLCLVEQFESAIKNQGSFPVCCAKQTCRSPILLTDMRSLLSSEKIEELFRASLGAFVASSDGAYRFCPSPDCPSVYR

Query:  VASPDTSGEPFMCGACYSETCTRCHLEYHPFLSCEQYQVFKEDPDSSLNEWRKDKENVKNCPVCGYTIEKIDGCNHIECRCGRHICWVCLEYFDSSDECY
        VA P  SGEPF+CGAC+SE CTRCHLEYHP ++CE+Y+ FKE+PD SL +W K K NVK CP+C  TIEK DGCNH++CRCG+HICW CL+ F   + CY
Subjt:  VASPDTSGEPFMCGACYSETCTRCHLEYHPFLSCEQYQVFKEDPDSSLNEWRKDKENVKNCPVCGYTIEKIDGCNHIECRCGRHICWVCLEYFDSSDECY

Query:  GHLR
         HLR
Subjt:  GHLR

P0CE10 ATP-dependent RNA helicase DEAH11, chloroplastic1.1e-7860.78Show/hide
Query:  CPICLCDIEDDRFELEACGHHFCRLCLVEQFESAIKNQGSFPVCCAKQTCRSPILLTDMRSLLSSEKIEELFRASLGAFVASSDGAYRFCPSPDCPSVYR
        CPICL ++ DD + LE C H FC+ CL+EQFE++++N  +FP+ C+   C +PI++ DMR+LLS EK++EL  ASL AFV SSDG  RFC +PDCPS+YR
Subjt:  CPICLCDIEDDRFELEACGHHFCRLCLVEQFESAIKNQGSFPVCCAKQTCRSPILLTDMRSLLSSEKIEELFRASLGAFVASSDGAYRFCPSPDCPSVYR

Query:  VASPDTSGEPFMCGACYSETCTRCHLEYHPFLSCEQYQVFKEDPDSSLNEWRKDKENVKNCPVCGYTIEKIDGCNHIECRCGRHICWVCLEYFDSSDECY
        VA P  SGEPF+CGAC+SETCTRCHLEYHP ++CE+Y+ FKE+PD SL +W K K+ VK CP+C  TIEK DGCNH++CRCG+HICW CL+ F  ++ CY
Subjt:  VASPDTSGEPFMCGACYSETCTRCHLEYHPFLSCEQYQVFKEDPDSSLNEWRKDKENVKNCPVCGYTIEKIDGCNHIECRCGRHICWVCLEYFDSSDECY

Query:  GHLR
         HLR
Subjt:  GHLR

Q9LVW9 Putative E3 ubiquitin-protein ligase ARI41.9e-1931.44Show/hide
Query:  CPICL-CDIEDDRFELEACGHHFCRLCLVEQFESAIKNQGSFPVCCAKQTCRSPILLTDMRSLLSSEKIEELFRASLGAFVASSDGAYRFCPS-PDCPSV
        C IC+  D+         CGH FC  C  E F   I       + C    C +  +  + R L+S+E  E+  R  + ++V   +   ++CPS P C + 
Subjt:  CPICL-CDIEDDRFELEACGHHFCRLCLVEQFESAIKNQGSFPVCCAKQTCRSPILLTDMRSLLSSEKIEELFRASLGAFVASSDGAYRFCPS-PDCPSV

Query:  YRVASPDTSGEPFMCGACYSETCTRCHLEYHPFLSCEQYQVFK---EDPDSSLNEWRKDKENVKNCPVCGYTIEKIDGCNHIECRCGRHICWVC
         R    D   +   C +C  + C  C  E H   SC  ++++K   ED   ++N W     N K CP C   I+K DGCNH+ C+CG+H CW+C
Subjt:  YRVASPDTSGEPFMCGACYSETCTRCHLEYHPFLSCEQYQVFK---EDPDSSLNEWRKDKENVKNCPVCGYTIEKIDGCNHIECRCGRHICWVC

Q9Y4X5 E3 ubiquitin-protein ligase ARIH12.5e-1930.1Show/hide
Query:  CPICLCDIEDDRFELEACGHHFCRLCLVEQFESAIKNQG-SFPVCCAKQTCRSPILLTDMRSLLSSEKIEELFRASLGAFVASSDGAYRFCPSPDCPSVY
        C IC  +  +  F    CGH FC  C  E   + I  +G    + C    C   +    +  L++  K++  ++  +       +   ++CP+PDC  V 
Subjt:  CPICLCDIEDDRFELEACGHHFCRLCLVEQFESAIKNQG-SFPVCCAKQTCRSPILLTDMRSLLSSEKIEELFRASLGAFVASSDGAYRFCPSPDCPSVY

Query:  RVASPDTSGEPFMCGACYSETCTRCHLEYHPFLSCEQYQ--VFKEDPDSSLNEWRKDKENVKNCPVCGYTIEKIDGCNHIECR---CGRHICWVCL
        +V  PD   +P  C  C  + C  C   +H  + C+  +  + K D DS  + W     N K CP C  TIEK  GCNH+ CR   C    CWVCL
Subjt:  RVASPDTSGEPFMCGACYSETCTRCHLEYHPFLSCEQYQ--VFKEDPDSSLNEWRKDKENVKNCPVCGYTIEKIDGCNHIECR---CGRHICWVCL

Arabidopsis top hitse value%identityAlignment
AT3G14250.1 RING/U-box superfamily protein2.4e-1726.32Show/hide
Query:  CGHHFCRLCLVEQFESAIKNQGSFPVCCAKQTCRSPILLTDMRSLLSSEKIEELFRASLGAFVASSDGAYRFCPSPDCPS-VYRVASPDTSGEPFMCGAC
        C H +C  C V    + IK   S  + C    C   I     R L+  +  +   +    + ++S D  Y  CP  DC + +    + D +     C +C
Subjt:  CGHHFCRLCLVEQFESAIKNQGSFPVCCAKQTCRSPILLTDMRSLLSSEKIEELFRASLGAFVASSDGAYRFCPSPDCPS-VYRVASPDTSGEPFMCGAC

Query:  YSETCTRCHLEYHPFLSCEQYQVF-------KEDPDSSLNEWRKDKENVKNCPVCGYTIEKIDGCNHIECRCGRHICWVCLEYFDSSDEC
        +   C +C + +H  + C+++Q F        ++ D+ L +  K+K+  + CP C + ++K++GC HI+CRCG   C+ C   + SS  C
Subjt:  YSETCTRCHLEYHPFLSCEQYQVF-------KEDPDSSLNEWRKDKENVKNCPVCGYTIEKIDGCNHIECRCGRHICWVCLEYFDSSDEC

AT3G27710.1 RING/U-box superfamily protein4.9e-1828.27Show/hide
Query:  CPICL-CDIEDDRFELEACGHHFCRLCLVEQFESAIKNQGSFPVCCAKQTCRSPILLTDMRSLLSSEKIEELFRASLGAFVASSDGAYRFCPS-PDCPSV
        C +C+  D+  +      CGH FC  C +  F   I    S  + C    C++      +R L+S E  +   R  + ++V   +   ++CPS P C S 
Subjt:  CPICL-CDIEDDRFELEACGHHFCRLCLVEQFESAIKNQGSFPVCCAKQTCRSPILLTDMRSLLSSEKIEELFRASLGAFVASSDGAYRFCPS-PDCPSV

Query:  YRVASPDTSGEPFMCGACYSETCTRCHLEYHPFLSCEQYQVFKEDPDSSLNEWRKDKENVKNCPVCGYTIEKIDGCNHIECRCGRHICWVC
         R            C +C  + C  C  E H   SC  ++++K+  +           N K CP C   I+K DGCN + C+CG+H CW+C
Subjt:  YRVASPDTSGEPFMCGACYSETCTRCHLEYHPFLSCEQYQVFKEDPDSSLNEWRKDKENVKNCPVCGYTIEKIDGCNHIECRCGRHICWVC

AT4G01020.1 helicase domain-containing protein / IBR domain-containing protein / zinc finger protein-related7.7e-8060.78Show/hide
Query:  CPICLCDIEDDRFELEACGHHFCRLCLVEQFESAIKNQGSFPVCCAKQTCRSPILLTDMRSLLSSEKIEELFRASLGAFVASSDGAYRFCPSPDCPSVYR
        CPICL ++ DD + LE C H FC+ CL+EQFE++++N  +FP+ C+   C +PI++ DMR+LLS EK++EL  ASL AFV SSDG  RFC +PDCPS+YR
Subjt:  CPICLCDIEDDRFELEACGHHFCRLCLVEQFESAIKNQGSFPVCCAKQTCRSPILLTDMRSLLSSEKIEELFRASLGAFVASSDGAYRFCPSPDCPSVYR

Query:  VASPDTSGEPFMCGACYSETCTRCHLEYHPFLSCEQYQVFKEDPDSSLNEWRKDKENVKNCPVCGYTIEKIDGCNHIECRCGRHICWVCLEYFDSSDECY
        VA P  SGEPF+CGAC+SETCTRCHLEYHP ++CE+Y+ FKE+PD SL +W K K+ VK CP+C  TIEK DGCNH++CRCG+HICW CL+ F  ++ CY
Subjt:  VASPDTSGEPFMCGACYSETCTRCHLEYHPFLSCEQYQVFKEDPDSSLNEWRKDKENVKNCPVCGYTIEKIDGCNHIECRCGRHICWVCLEYFDSSDECY

Query:  GHLR
         HLR
Subjt:  GHLR

AT5G10370.1 helicase domain-containing protein / IBR domain-containing protein / zinc finger protein-related1.6e-8061.76Show/hide
Query:  CPICLCDIEDDRFELEACGHHFCRLCLVEQFESAIKNQGSFPVCCAKQTCRSPILLTDMRSLLSSEKIEELFRASLGAFVASSDGAYRFCPSPDCPSVYR
        CPICL ++ DD + LE C H FC+ CL+EQFE++++N  +FP+ C+   C +PI+L DMR+LLS EK++ELF ASL +FV SSDG +RFC +PDCPSVYR
Subjt:  CPICLCDIEDDRFELEACGHHFCRLCLVEQFESAIKNQGSFPVCCAKQTCRSPILLTDMRSLLSSEKIEELFRASLGAFVASSDGAYRFCPSPDCPSVYR

Query:  VASPDTSGEPFMCGACYSETCTRCHLEYHPFLSCEQYQVFKEDPDSSLNEWRKDKENVKNCPVCGYTIEKIDGCNHIECRCGRHICWVCLEYFDSSDECY
        VA P  SGEPF+CGAC+SE CTRCHLEYHP ++CE+Y+ FKE+PD SL +W K K NVK CP+C  TIEK DGCNH++CRCG+HICW CL+ F   + CY
Subjt:  VASPDTSGEPFMCGACYSETCTRCHLEYHPFLSCEQYQVFKEDPDSSLNEWRKDKENVKNCPVCGYTIEKIDGCNHIECRCGRHICWVCLEYFDSSDECY

Query:  GHLR
         HLR
Subjt:  GHLR

AT5G13830.1 FtsJ-like methyltransferase family protein2.4e-2576Show/hide
Query:  MSGAGAPDFFYREAQRLGYVARSAFKLLQIQKQFKLINSGSSVLDLGCAPSAWLQVACQR----PNGGLCFGFSL
        MSGAG PDFFYREAQRLGYVARSAFKLLQIQKQ+KLI  GSSVLDLGCAP AWLQVACQ      +GG+  G  +
Subjt:  MSGAGAPDFFYREAQRLGYVARSAFKLLQIQKQFKLINSGSSVLDLGCAPSAWLQVACQR----PNGGLCFGFSL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTGGTGGTTCAGCTGAGAGGTCTAATGATGCAGATGCTTGTCCAATTTGCTTATGTGACATTGAAGACGACAGGTTTGAACTTGAAGCTTGTGGACACCATTTTTG
CCGACTCTGCCTTGTGGAGCAGTTTGAGTCCGCCATAAAAAACCAGGGAAGCTTCCCAGTATGTTGTGCTAAACAAACATGCCGGTCTCCTATTTTACTTACGGATATGA
GATCTCTGTTGTCAAGCGAGAAGATAGAGGAACTGTTTCGAGCTTCATTGGGAGCTTTTGTTGCTTCTAGCGACGGTGCCTATAGGTTTTGCCCATCTCCTGACTGCCCC
TCAGTTTACCGAGTGGCCAGCCCCGATACGTCTGGTGAACCATTCATGTGTGGAGCATGCTACTCAGAAACTTGTACAAGGTGCCATTTGGAGTATCATCCATTCCTATC
ATGCGAACAGTACCAAGTATTCAAGGAAGACCCTGATTCGTCACTGAATGAGTGGCGTAAAGATAAGGAGAATGTCAAGAACTGCCCTGTTTGCGGGTACACGATCGAGA
AGATAGATGGGTGCAACCACATTGAATGTAGGTGTGGAAGGCATATTTGTTGGGTTTGTTTGGAATATTTTGATAGCAGTGATGAATGCTATGGCCATTTGAGGCTTTCC
TGGGAGGAAGAAGAACGGGGGAAGAAAGAAATGAGTGGAGCAGGGGCACCTGATTTCTTCTACAGAGAGGCTCAACGCCTTGGGTATGTCGCAAGATCCGCCTTCAAGTT
GCTTCAGATTCAAAAGCAATTCAAGTTGATTAATTCAGGCTCGTCCGTTTTGGACCTTGGTTGTGCTCCCAGTGCCTGGCTTCAGGTAGCTTGCCAGAGGCCCAATGGAG
GGCTCTGTTTTGGTTTTTCATTAGGGATGCAAGCAGTTAACTTGGCTATTGGAGAAGCCGCGTTAGGTGTTGGTGATGATGTTATGCATGGAAAGGGCAAGGACAATGCG
GATGATTCAACTTCAGTTGCAGATTATTATGATGGTGTGCTGCAAAAAGGAGGTAGAGAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTGGTGGTTCAGCTGAGAGGTCTAATGATGCAGATGCTTGTCCAATTTGCTTATGTGACATTGAAGACGACAGGTTTGAACTTGAAGCTTGTGGACACCATTTTTG
CCGACTCTGCCTTGTGGAGCAGTTTGAGTCCGCCATAAAAAACCAGGGAAGCTTCCCAGTATGTTGTGCTAAACAAACATGCCGGTCTCCTATTTTACTTACGGATATGA
GATCTCTGTTGTCAAGCGAGAAGATAGAGGAACTGTTTCGAGCTTCATTGGGAGCTTTTGTTGCTTCTAGCGACGGTGCCTATAGGTTTTGCCCATCTCCTGACTGCCCC
TCAGTTTACCGAGTGGCCAGCCCCGATACGTCTGGTGAACCATTCATGTGTGGAGCATGCTACTCAGAAACTTGTACAAGGTGCCATTTGGAGTATCATCCATTCCTATC
ATGCGAACAGTACCAAGTATTCAAGGAAGACCCTGATTCGTCACTGAATGAGTGGCGTAAAGATAAGGAGAATGTCAAGAACTGCCCTGTTTGCGGGTACACGATCGAGA
AGATAGATGGGTGCAACCACATTGAATGTAGGTGTGGAAGGCATATTTGTTGGGTTTGTTTGGAATATTTTGATAGCAGTGATGAATGCTATGGCCATTTGAGGCTTTCC
TGGGAGGAAGAAGAACGGGGGAAGAAAGAAATGAGTGGAGCAGGGGCACCTGATTTCTTCTACAGAGAGGCTCAACGCCTTGGGTATGTCGCAAGATCCGCCTTCAAGTT
GCTTCAGATTCAAAAGCAATTCAAGTTGATTAATTCAGGCTCGTCCGTTTTGGACCTTGGTTGTGCTCCCAGTGCCTGGCTTCAGGTAGCTTGCCAGAGGCCCAATGGAG
GGCTCTGTTTTGGTTTTTCATTAGGGATGCAAGCAGTTAACTTGGCTATTGGAGAAGCCGCGTTAGGTGTTGGTGATGATGTTATGCATGGAAAGGGCAAGGACAATGCG
GATGATTCAACTTCAGTTGCAGATTATTATGATGGTGTGCTGCAAAAAGGAGGTAGAGAGTGA
Protein sequenceShow/hide protein sequence
MSGGSAERSNDADACPICLCDIEDDRFELEACGHHFCRLCLVEQFESAIKNQGSFPVCCAKQTCRSPILLTDMRSLLSSEKIEELFRASLGAFVASSDGAYRFCPSPDCP
SVYRVASPDTSGEPFMCGACYSETCTRCHLEYHPFLSCEQYQVFKEDPDSSLNEWRKDKENVKNCPVCGYTIEKIDGCNHIECRCGRHICWVCLEYFDSSDECYGHLRLS
WEEEERGKKEMSGAGAPDFFYREAQRLGYVARSAFKLLQIQKQFKLINSGSSVLDLGCAPSAWLQVACQRPNGGLCFGFSLGMQAVNLAIGEAALGVGDDVMHGKGKDNA
DDSTSVADYYDGVLQKGGRE