; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0019022 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0019022
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description50S ribosomal protein L29, chloroplastic-like
Genome locationchr5:37709754..37711874
RNA-Seq ExpressionLag0019022
SyntenyLag0019022
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005840 - ribosome (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR001854 - Ribosomal protein L29/L35
IPR036049 - Ribosomal protein L29/L35 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6577307.1 50S ribosomal protein L29, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]3.5e-7292.86Show/hide
Query:  MINLSIASPSSVFLPSKVLSSTSKSSFNGLQIRFPLSFRVPPKAACTGGRNSSVVMMAKREEELKEIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFK
        M+NLSIASPSSV +P+K LSSTSKSSFNGLQIRFP SFRVPPKAACTGGRNS VVMMAKREEELK+IRAKTTEEINEEVVDLKGELLMLRLQKSARNEFK
Subjt:  MINLSIASPSSVFLPSKVLSSTSKSSFNGLQIRFPLSFRVPPKAACTGGRNSSVVMMAKREEELKEIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFK

Query:  SSEFRRMRKRIARMLTVRREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEAEKSA
        SSEFRRMRKRIARMLTV+REREIEEGVGKRLSRKLDRKWK+SIVVRPPPSLKKLREEE AAE AEKSA
Subjt:  SSEFRRMRKRIARMLTVRREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEAEKSA

XP_022941582.1 50S ribosomal protein L29, chloroplastic-like [Cucurbita moschata]5.9e-7293.45Show/hide
Query:  MINLSIASPSSVFLPSKVLSSTSKSSFNGLQIRFPLSFRVPPKAACTGGRNSSVVMMAKREEELKEIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFK
        MINLSIASPSSV  PSK LSSTSKSSFNG QIRFP SFRVPPK A TGGRNSSVVMMAKREEELKEIR KTTEEINEEV+DLKGELLMLRLQKSARNEFK
Subjt:  MINLSIASPSSVFLPSKVLSSTSKSSFNGLQIRFPLSFRVPPKAACTGGRNSSVVMMAKREEELKEIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFK

Query:  SSEFRRMRKRIARMLTVRREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEAEKSA
        SSEFRRMRKRIARMLTV+REREIEEGVGKRLSRKLDRKWK+SIVVRPPPSLKKLREEEAAAEEAEKSA
Subjt:  SSEFRRMRKRIARMLTVRREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEAEKSA

XP_022977189.1 50S ribosomal protein L29, chloroplastic-like [Cucurbita maxima]1.3e-7192.86Show/hide
Query:  MINLSIASPSSVFLPSKVLSSTSKSSFNGLQIRFPLSFRVPPKAACTGGRNSSVVMMAKREEELKEIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFK
        M+NLSIASPSSV  PSK LSSTSKSSFNG QIRFP SFRVPPK A TGGRNSSVVMMAKREEELKEIR KTTEEINEEV+DLKGELLMLRLQKSARNEFK
Subjt:  MINLSIASPSSVFLPSKVLSSTSKSSFNGLQIRFPLSFRVPPKAACTGGRNSSVVMMAKREEELKEIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFK

Query:  SSEFRRMRKRIARMLTVRREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEAEKSA
        SSEFRRMRKRIARMLTV+REREIEEGVGKRLSRKLDRKWK+SIVVRPPPSLKKLREEEAAAEEAEKSA
Subjt:  SSEFRRMRKRIARMLTVRREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEAEKSA

XP_022985118.1 50S ribosomal protein L29, chloroplastic-like [Cucurbita maxima]3.5e-7293.45Show/hide
Query:  MINLSIASPSSVFLPSKVLSSTSKSSFNGLQIRFPLSFRVPPKAACTGGRNSSVVMMAKREEELKEIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFK
        MINLSIASPSSV +P+K LSSTSKSSFNGLQIRFP SFRVPPKAAC GGRNS VVMMAKREEELK+IRAKTTEEINEEVVDLKGELLMLRLQKSARNEFK
Subjt:  MINLSIASPSSVFLPSKVLSSTSKSSFNGLQIRFPLSFRVPPKAACTGGRNSSVVMMAKREEELKEIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFK

Query:  SSEFRRMRKRIARMLTVRREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEAEKSA
        SSEFRRMRKRIARMLTV+REREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEE AAE AEKSA
Subjt:  SSEFRRMRKRIARMLTVRREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEAEKSA

XP_038903244.1 50S ribosomal protein L29, chloroplastic [Benincasa hispida]5.4e-7394.05Show/hide
Query:  MINLSIASPSSVFLPSKVLSSTSKSSFNGLQIRFPLSFRVPPKAACTGGRNSSVVMMAKREEELKEIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFK
        MINLSIASPS+V +P KVL+STSKSSFNGLQIRFP SFRVPPK ACTGGRNSSVVMMAKREEELKEIRAK+TEEI EEVVDLKGELLMLRLQKSARNEFK
Subjt:  MINLSIASPSSVFLPSKVLSSTSKSSFNGLQIRFPLSFRVPPKAACTGGRNSSVVMMAKREEELKEIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFK

Query:  SSEFRRMRKRIARMLTVRREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEAEKSA
        SSEFRRMRKRIARMLTV+REREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEAEKSA
Subjt:  SSEFRRMRKRIARMLTVRREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEAEKSA

TrEMBL top hitse value%identityAlignment
A0A6J1C3N4 50S ribosomal protein L29, chloroplastic1.1e-6891.67Show/hide
Query:  MINLSIASPSSVFLPSKVLSSTSKSSFNGLQIRFPLSFRVPPKAACTGGRNSSVVMMAKREEELKEIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFK
        MINLSIASPS+V LPS VLSSTSKSSF GLQIR P S RV  K  C G RNSSVVMMAKREEELKEIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFK
Subjt:  MINLSIASPSSVFLPSKVLSSTSKSSFNGLQIRFPLSFRVPPKAACTGGRNSSVVMMAKREEELKEIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFK

Query:  SSEFRRMRKRIARMLTVRREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEAEKSA
        SSEFRRMRKRIARMLTV+REREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEAEKSA
Subjt:  SSEFRRMRKRIARMLTVRREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEAEKSA

A0A6J1EMX4 50S ribosomal protein L29, chloroplastic-like4.6e-7092.07Show/hide
Query:  MINLSIASPSSVFLPSKVLSSTSKSSFNGLQIRFPLSFRVPPKAACTGGRNSSVVMMAKREEELKEIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFK
        M+NLSIASPSSV +P+K LSSTSKSSFNGLQIRFP S RVPPKAACTGGRNS VVMMAKREEELK+IRAKTTEEINEEVVDLKGELLMLRLQKSARNEFK
Subjt:  MINLSIASPSSVFLPSKVLSSTSKSSFNGLQIRFPLSFRVPPKAACTGGRNSSVVMMAKREEELKEIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFK

Query:  SSEFRRMRKRIARMLTVRREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEA
        SSEFRRMRKRIARMLTV+REREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEE AAE++
Subjt:  SSEFRRMRKRIARMLTVRREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEA

A0A6J1FMW5 50S ribosomal protein L29, chloroplastic-like2.9e-7293.45Show/hide
Query:  MINLSIASPSSVFLPSKVLSSTSKSSFNGLQIRFPLSFRVPPKAACTGGRNSSVVMMAKREEELKEIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFK
        MINLSIASPSSV  PSK LSSTSKSSFNG QIRFP SFRVPPK A TGGRNSSVVMMAKREEELKEIR KTTEEINEEV+DLKGELLMLRLQKSARNEFK
Subjt:  MINLSIASPSSVFLPSKVLSSTSKSSFNGLQIRFPLSFRVPPKAACTGGRNSSVVMMAKREEELKEIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFK

Query:  SSEFRRMRKRIARMLTVRREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEAEKSA
        SSEFRRMRKRIARMLTV+REREIEEGVGKRLSRKLDRKWK+SIVVRPPPSLKKLREEEAAAEEAEKSA
Subjt:  SSEFRRMRKRIARMLTVRREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEAEKSA

A0A6J1IQR3 50S ribosomal protein L29, chloroplastic-like6.4e-7292.86Show/hide
Query:  MINLSIASPSSVFLPSKVLSSTSKSSFNGLQIRFPLSFRVPPKAACTGGRNSSVVMMAKREEELKEIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFK
        M+NLSIASPSSV  PSK LSSTSKSSFNG QIRFP SFRVPPK A TGGRNSSVVMMAKREEELKEIR KTTEEINEEV+DLKGELLMLRLQKSARNEFK
Subjt:  MINLSIASPSSVFLPSKVLSSTSKSSFNGLQIRFPLSFRVPPKAACTGGRNSSVVMMAKREEELKEIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFK

Query:  SSEFRRMRKRIARMLTVRREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEAEKSA
        SSEFRRMRKRIARMLTV+REREIEEGVGKRLSRKLDRKWK+SIVVRPPPSLKKLREEEAAAEEAEKSA
Subjt:  SSEFRRMRKRIARMLTVRREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEAEKSA

A0A6J1JCM6 50S ribosomal protein L29, chloroplastic-like1.7e-7293.45Show/hide
Query:  MINLSIASPSSVFLPSKVLSSTSKSSFNGLQIRFPLSFRVPPKAACTGGRNSSVVMMAKREEELKEIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFK
        MINLSIASPSSV +P+K LSSTSKSSFNGLQIRFP SFRVPPKAAC GGRNS VVMMAKREEELK+IRAKTTEEINEEVVDLKGELLMLRLQKSARNEFK
Subjt:  MINLSIASPSSVFLPSKVLSSTSKSSFNGLQIRFPLSFRVPPKAACTGGRNSSVVMMAKREEELKEIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFK

Query:  SSEFRRMRKRIARMLTVRREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEAEKSA
        SSEFRRMRKRIARMLTV+REREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEE AAE AEKSA
Subjt:  SSEFRRMRKRIARMLTVRREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEAEKSA

SwissProt top hitse value%identityAlignment
P82248 50S ribosomal protein L29, chloroplastic4.5e-3857.99Show/hide
Query:  ASPSSVFLPSKVLSS-TSKSSFNGLQI-------RFPLSFRVPPKAACTGGRNSSVVMMAKREEELKEIRAKTTEEINEEVVDLKGELLMLRLQKSARNE
        ++P S  L S   S+  +KSSF+GL++          L  + PP         SSVV+M K+E+ELKE+R KT E++NEE++ LKGEL MLRLQ+SAR  
Subjt:  ASPSSVFLPSKVLSS-TSKSSFNGLQI-------RFPLSFRVPPKAACTGGRNSSVVMMAKREEELKEIRAKTTEEINEEVVDLKGELLMLRLQKSARNE

Query:  FKSSEFRRMRKRIARMLTVRREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEAEKS
        FK S+F RMRKR+ARMLTV+REREIE+GVGKRLSRKLD+ WK+SIVVRPPPSLKKL+E+  A  EAEK+
Subjt:  FKSSEFRRMRKRIARMLTVRREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEAEKS

Q49ZG0 50S ribosomal protein L292.5e-0448.39Show/hide
Query:  KEIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFKSSEFRRMRKRIARMLTVRREREIEEG
        KEIR  TT EI E++   K EL  LR Q +     +++  R +RK IAR+ TV REREIE+G
Subjt:  KEIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFKSSEFRRMRKRIARMLTVRREREIEEG

Q4L8A6 50S ribosomal protein L297.2e-0449.18Show/hide
Query:  KEIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFKSSEFRRMRKRIARMLTVRREREIEE
        KEIR  TT EI E++   K EL  LR Q +     +++  R +RK IAR+ TV REREIEE
Subjt:  KEIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFKSSEFRRMRKRIARMLTVRREREIEE

Q9FJP3 50S ribosomal protein L29, chloroplastic1.8e-4765.48Show/hide
Query:  MINLSIASP--SSVFLPSKVLSSTSKSSFNGLQIRFPLSFRVPPKAACTGGR-NSSVVMMAKREEELKEIRAKTTEEINEEVVDLKGELLMLRLQKSARN
        M++LSIA+P  +++F      ++++ SSF+G++I+  +S RVP  A  +      SVVMM+KRE ELKEIR+KTTE++ EEVVDLKGEL MLRLQKSARN
Subjt:  MINLSIASP--SSVFLPSKVLSSTSKSSFNGLQIRFPLSFRVPPKAACTGGR-NSSVVMMAKREEELKEIRAKTTEEINEEVVDLKGELLMLRLQKSARN

Query:  EFKSSEFRRMRKRIARMLTVRREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEAE
        EFKSS+FRRM+K++ARMLTV+REREI+EG+ KRLSRKLDR+WKKSIV RPPPSLKKL+EEEAA E AE
Subjt:  EFKSSEFRRMRKRIARMLTVRREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEAE

Q9SWI6 50S ribosomal protein L29, chloroplastic1.0e-3457.79Show/hide
Query:  LSIASPSSVFLPSKVLSSTSKSSFNGLQIRFPLSFRVPPKAACTGGRNSSVVMMAKREEELKEIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFKSSE
        ++  +P + FL  + L   + + F GL +    + R          R +++V MAKRE+EL+EIRA TTE++ EEVVDLKGEL +LRL++SAR EFK+SE
Subjt:  LSIASPSSVFLPSKVLSSTSKSSFNGLQIRFPLSFRVPPKAACTGGRNSSVVMMAKREEELKEIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFKSSE

Query:  FRRMRKRIARMLTVRREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREE
        F RMRKRIARMLTV+REREIE+G+ KRLSRKLDRKWK+SIVVRPPPSL+  +EE
Subjt:  FRRMRKRIARMLTVRREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREE

Arabidopsis top hitse value%identityAlignment
AT5G65220.1 Ribosomal L29 family protein1.3e-4865.48Show/hide
Query:  MINLSIASP--SSVFLPSKVLSSTSKSSFNGLQIRFPLSFRVPPKAACTGGR-NSSVVMMAKREEELKEIRAKTTEEINEEVVDLKGELLMLRLQKSARN
        M++LSIA+P  +++F      ++++ SSF+G++I+  +S RVP  A  +      SVVMM+KRE ELKEIR+KTTE++ EEVVDLKGEL MLRLQKSARN
Subjt:  MINLSIASP--SSVFLPSKVLSSTSKSSFNGLQIRFPLSFRVPPKAACTGGR-NSSVVMMAKREEELKEIRAKTTEEINEEVVDLKGELLMLRLQKSARN

Query:  EFKSSEFRRMRKRIARMLTVRREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEAE
        EFKSS+FRRM+K++ARMLTV+REREI+EG+ KRLSRKLDR+WKKSIV RPPPSLKKL+EEEAA E AE
Subjt:  EFKSSEFRRMRKRIARMLTVRREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEAE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTAACCTTTCAATTGCTTCGCCTTCGAGTGTTTTTCTTCCTTCAAAAGTTCTTAGCTCGACCTCCAAATCCTCCTTCAATGGCCTTCAAATCCGTTTCCCACTTTC
GTTTCGCGTTCCTCCTAAAGCGGCATGTACCGGAGGCCGCAATTCGTCGGTGGTAATGATGGCGAAGAGGGAAGAGGAATTGAAGGAAATCAGAGCGAAAACTACTGAGG
AAATAAACGAAGAGGTCGTCGATCTCAAGGGCGAGCTTCTTATGCTTCGGCTTCAGAAATCAGCTCGCAATGAGTTTAAGTCCAGTGAATTCCGCCGCATGCGCAAACGG
ATTGCTCGGATGCTAACTGTAAGACGTGAAAGGGAGATCGAAGAGGGAGTGGGCAAAAGGCTGTCGAGAAAGTTAGATAGAAAGTGGAAGAAAAGTATTGTCGTCAGACC
ACCTCCATCTTTGAAGAAGTTGCGAGAGGAAGAAGCAGCAGCTGAAGAAGCTGAGAAATCTGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGATTAACCTTTCAATTGCTTCGCCTTCGAGTGTTTTTCTTCCTTCAAAAGTTCTTAGCTCGACCTCCAAATCCTCCTTCAATGGCCTTCAAATCCGTTTCCCACTTTC
GTTTCGCGTTCCTCCTAAAGCGGCATGTACCGGAGGCCGCAATTCGTCGGTGGTAATGATGGCGAAGAGGGAAGAGGAATTGAAGGAAATCAGAGCGAAAACTACTGAGG
AAATAAACGAAGAGGTCGTCGATCTCAAGGGCGAGCTTCTTATGCTTCGGCTTCAGAAATCAGCTCGCAATGAGTTTAAGTCCAGTGAATTCCGCCGCATGCGCAAACGG
ATTGCTCGGATGCTAACTGTAAGACGTGAAAGGGAGATCGAAGAGGGAGTGGGCAAAAGGCTGTCGAGAAAGTTAGATAGAAAGTGGAAGAAAAGTATTGTCGTCAGACC
ACCTCCATCTTTGAAGAAGTTGCGAGAGGAAGAAGCAGCAGCTGAAGAAGCTGAGAAATCTGCTTGA
Protein sequenceShow/hide protein sequence
MINLSIASPSSVFLPSKVLSSTSKSSFNGLQIRFPLSFRVPPKAACTGGRNSSVVMMAKREEELKEIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFKSSEFRRMRKR
IARMLTVRREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEAEKSA