; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0019030 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0019030
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description50S ribosomal protein L23
Genome locationchr5:37782427..37782948
RNA-Seq ExpressionLag0019030
SyntenyLag0019030
Gene Ontology termsGO:0032543 - mitochondrial translation (biological process)
GO:0005762 - mitochondrial large ribosomal subunit (cellular component)
GO:0003729 - mRNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR012678 - Ribosomal protein L23/L15e core domain superfamily
IPR013025 - Ribosomal protein L25/L23


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK15876.1 Nucleotide-binding, alpha-beta plait [Cucumis melo var. makuwa]2.4e-8494.83Show/hide
Query:  MGSRLGRRVVHFANLPIKLLMPTSFTNITEIALKTIPSASKIEIKRVLESLYGFEVDKVRTLNMEGKKKKRGGLLIAKPDYKKAYVTLRNPLSISPDVYP
        MGSRLGRRVVHFANLPIKLLMPTSFTNITEIALKTIPSASKIEIKRVLESLYGF+VDKVRTLNMEGKKKKRGG+LIAKPDYKKAYVTLRNPLSIS D+YP
Subjt:  MGSRLGRRVVHFANLPIKLLMPTSFTNITEIALKTIPSASKIEIKRVLESLYGFEVDKVRTLNMEGKKKKRGGLLIAKPDYKKAYVTLRNPLSISPDVYP

Query:  IRIIEEDKRNMNKQSKSSIVEEGEAKRHWLHEKEPVGLKAYKGSADRGRRRI-GGAEAVEPSTKFPWSSMRSGR
        IRIIEEDKRNMNKQSKSSIVEEGEAKRHWLHEKEPVG+K YKG ADRGRRRI GGAE VEPSTKFPWSSMRSGR
Subjt:  IRIIEEDKRNMNKQSKSSIVEEGEAKRHWLHEKEPVGLKAYKGSADRGRRRI-GGAEAVEPSTKFPWSSMRSGR

XP_022929525.1 uncharacterized protein LOC111436066 [Cucurbita moschata]2.4e-8494.22Show/hide
Query:  MGSRLGRRVVHFANLPIKLLMPTSFTNITEIALKTIPSASKIEIKRVLESLYGFEVDKVRTLNMEGKKKKRGGLLIAKPDYKKAYVTLRNPLSISPDVYP
        MGSRLGRRV+HFANLPIKLLMPTSFTNITEIALKTIPSASKIEIKRVLESLYGFEVDKVRTLNM+GKKKKRGGLLIAKPDYKKAYVTLRNPLSISPDVYP
Subjt:  MGSRLGRRVVHFANLPIKLLMPTSFTNITEIALKTIPSASKIEIKRVLESLYGFEVDKVRTLNMEGKKKKRGGLLIAKPDYKKAYVTLRNPLSISPDVYP

Query:  IRIIEEDKRNMNKQSKSSIVEEGEAKRHWLHEKEPVGLKAYKGSADRGRRRIGGAEAVEPSTKFPWSSMRSGR
        IRIIEEDKRNMNKQSKSSIVEEGEAKRHWLHEKEPVG KAYKG ++R RRR G AE VEPSTKFPWSSMRSGR
Subjt:  IRIIEEDKRNMNKQSKSSIVEEGEAKRHWLHEKEPVGLKAYKGSADRGRRRIGGAEAVEPSTKFPWSSMRSGR

XP_022943267.1 uncharacterized protein LOC111448049 [Cucurbita moschata]5.7e-8697.11Show/hide
Query:  MGSRLGRRVVHFANLPIKLLMPTSFTNITEIALKTIPSASKIEIKRVLESLYGFEVDKVRTLNMEGKKKKRGGLLIAKPDYKKAYVTLRNPLSISPDVYP
        M SRLGRRVVHFANLPIKLLMPTSFTNITEIALKTIPSASKIEIKRVLESLYGFEVDKVRTLNM+GKKKKRGGLLIAKPDYKKAYVTLRNPLSISPDVYP
Subjt:  MGSRLGRRVVHFANLPIKLLMPTSFTNITEIALKTIPSASKIEIKRVLESLYGFEVDKVRTLNMEGKKKKRGGLLIAKPDYKKAYVTLRNPLSISPDVYP

Query:  IRIIEEDKRNMNKQSKSSIVEEGEAKRHWLHEKEPVGLKAYKGSADRGRRRIGGAEAVEPSTKFPWSSMRSGR
        IRIIEEDKRNMNKQSKSSIVEEGEAKRHWLHEKE VGLK YKG ADRGRRRIGGAEAVEPSTKFPWSSMRSGR
Subjt:  IRIIEEDKRNMNKQSKSSIVEEGEAKRHWLHEKEPVGLKAYKGSADRGRRRIGGAEAVEPSTKFPWSSMRSGR

XP_023531609.1 uncharacterized protein LOC111793793 [Cucurbita pepo subsp. pepo]5.1e-8797.69Show/hide
Query:  MGSRLGRRVVHFANLPIKLLMPTSFTNITEIALKTIPSASKIEIKRVLESLYGFEVDKVRTLNMEGKKKKRGGLLIAKPDYKKAYVTLRNPLSISPDVYP
        MGSRLGRRVVHFANLPIKLLMPTSFTNITEIALKTIPSASKIEIKRVLESLYGFEVDKVRTLNM+GKKKKRGGLLIAKPDYKKAYVTLRNPLSISPDVYP
Subjt:  MGSRLGRRVVHFANLPIKLLMPTSFTNITEIALKTIPSASKIEIKRVLESLYGFEVDKVRTLNMEGKKKKRGGLLIAKPDYKKAYVTLRNPLSISPDVYP

Query:  IRIIEEDKRNMNKQSKSSIVEEGEAKRHWLHEKEPVGLKAYKGSADRGRRRIGGAEAVEPSTKFPWSSMRSGR
        IRIIEEDKRNMNKQSKSSIVEEGEAKRHWLHEKE VGLK YKG ADRGRRRIGGAEAVEPSTKFPWSSMRSGR
Subjt:  IRIIEEDKRNMNKQSKSSIVEEGEAKRHWLHEKEPVGLKAYKGSADRGRRRIGGAEAVEPSTKFPWSSMRSGR

XP_038905477.1 uncharacterized protein LOC120091488 [Benincasa hispida]1.7e-8596.53Show/hide
Query:  MGSRLGRRVVHFANLPIKLLMPTSFTNITEIALKTIPSASKIEIKRVLESLYGFEVDKVRTLNMEGKKKKRGGLLIAKPDYKKAYVTLRNPLSISPDVYP
        MGSRLGRRVVHFANLPIKLLMPTSFTNITEIALKTIPSASKIEIKRVLESLYGFEVDKVRTLNMEGKKKKRGGLLIAKPDYKKAYVTLRNPLSISPDVYP
Subjt:  MGSRLGRRVVHFANLPIKLLMPTSFTNITEIALKTIPSASKIEIKRVLESLYGFEVDKVRTLNMEGKKKKRGGLLIAKPDYKKAYVTLRNPLSISPDVYP

Query:  IRIIEEDKRNMNKQSKSSIVEEGEAKRHWLHEKEPVGLKAYKGSADRGRRRIGGAEAVEPSTKFPWSSMRSGR
        IRIIEEDK+NMNKQSKSSIVEEGEAKRHWLHEKEPVGLK YKG ADRGRR IGGAE VE STKFPWSSMRSGR
Subjt:  IRIIEEDKRNMNKQSKSSIVEEGEAKRHWLHEKEPVGLKAYKGSADRGRRRIGGAEAVEPSTKFPWSSMRSGR

TrEMBL top hitse value%identityAlignment
A0A1S3C191 uncharacterized protein LOC103495731 isoform X11.2e-8494.83Show/hide
Query:  MGSRLGRRVVHFANLPIKLLMPTSFTNITEIALKTIPSASKIEIKRVLESLYGFEVDKVRTLNMEGKKKKRGGLLIAKPDYKKAYVTLRNPLSISPDVYP
        MGSRLGRRVVHFANLPIKLLMPTSFTNITEIALKTIPSASKIEIKRVLESLYGF+VDKVRTLNMEGKKKKRGG+LIAKPDYKKAYVTLRNPLSIS D+YP
Subjt:  MGSRLGRRVVHFANLPIKLLMPTSFTNITEIALKTIPSASKIEIKRVLESLYGFEVDKVRTLNMEGKKKKRGGLLIAKPDYKKAYVTLRNPLSISPDVYP

Query:  IRIIEEDKRNMNKQSKSSIVEEGEAKRHWLHEKEPVGLKAYKGSADRGRRRI-GGAEAVEPSTKFPWSSMRSGR
        IRIIEEDKRNMNKQSKSSIVEEGEAKRHWLHEKEPVG+K YKG ADRGRRRI GGAE VEPSTKFPWSSMRSGR
Subjt:  IRIIEEDKRNMNKQSKSSIVEEGEAKRHWLHEKEPVGLKAYKGSADRGRRRI-GGAEAVEPSTKFPWSSMRSGR

A0A5D3CZJ7 Nucleotide-binding, alpha-beta plait1.2e-8494.83Show/hide
Query:  MGSRLGRRVVHFANLPIKLLMPTSFTNITEIALKTIPSASKIEIKRVLESLYGFEVDKVRTLNMEGKKKKRGGLLIAKPDYKKAYVTLRNPLSISPDVYP
        MGSRLGRRVVHFANLPIKLLMPTSFTNITEIALKTIPSASKIEIKRVLESLYGF+VDKVRTLNMEGKKKKRGG+LIAKPDYKKAYVTLRNPLSIS D+YP
Subjt:  MGSRLGRRVVHFANLPIKLLMPTSFTNITEIALKTIPSASKIEIKRVLESLYGFEVDKVRTLNMEGKKKKRGGLLIAKPDYKKAYVTLRNPLSISPDVYP

Query:  IRIIEEDKRNMNKQSKSSIVEEGEAKRHWLHEKEPVGLKAYKGSADRGRRRI-GGAEAVEPSTKFPWSSMRSGR
        IRIIEEDKRNMNKQSKSSIVEEGEAKRHWLHEKEPVG+K YKG ADRGRRRI GGAE VEPSTKFPWSSMRSGR
Subjt:  IRIIEEDKRNMNKQSKSSIVEEGEAKRHWLHEKEPVGLKAYKGSADRGRRRI-GGAEAVEPSTKFPWSSMRSGR

A0A6J1EUM4 uncharacterized protein LOC1114360661.2e-8494.22Show/hide
Query:  MGSRLGRRVVHFANLPIKLLMPTSFTNITEIALKTIPSASKIEIKRVLESLYGFEVDKVRTLNMEGKKKKRGGLLIAKPDYKKAYVTLRNPLSISPDVYP
        MGSRLGRRV+HFANLPIKLLMPTSFTNITEIALKTIPSASKIEIKRVLESLYGFEVDKVRTLNM+GKKKKRGGLLIAKPDYKKAYVTLRNPLSISPDVYP
Subjt:  MGSRLGRRVVHFANLPIKLLMPTSFTNITEIALKTIPSASKIEIKRVLESLYGFEVDKVRTLNMEGKKKKRGGLLIAKPDYKKAYVTLRNPLSISPDVYP

Query:  IRIIEEDKRNMNKQSKSSIVEEGEAKRHWLHEKEPVGLKAYKGSADRGRRRIGGAEAVEPSTKFPWSSMRSGR
        IRIIEEDKRNMNKQSKSSIVEEGEAKRHWLHEKEPVG KAYKG ++R RRR G AE VEPSTKFPWSSMRSGR
Subjt:  IRIIEEDKRNMNKQSKSSIVEEGEAKRHWLHEKEPVGLKAYKGSADRGRRRIGGAEAVEPSTKFPWSSMRSGR

A0A6J1FSK6 uncharacterized protein LOC1114480492.8e-8697.11Show/hide
Query:  MGSRLGRRVVHFANLPIKLLMPTSFTNITEIALKTIPSASKIEIKRVLESLYGFEVDKVRTLNMEGKKKKRGGLLIAKPDYKKAYVTLRNPLSISPDVYP
        M SRLGRRVVHFANLPIKLLMPTSFTNITEIALKTIPSASKIEIKRVLESLYGFEVDKVRTLNM+GKKKKRGGLLIAKPDYKKAYVTLRNPLSISPDVYP
Subjt:  MGSRLGRRVVHFANLPIKLLMPTSFTNITEIALKTIPSASKIEIKRVLESLYGFEVDKVRTLNMEGKKKKRGGLLIAKPDYKKAYVTLRNPLSISPDVYP

Query:  IRIIEEDKRNMNKQSKSSIVEEGEAKRHWLHEKEPVGLKAYKGSADRGRRRIGGAEAVEPSTKFPWSSMRSGR
        IRIIEEDKRNMNKQSKSSIVEEGEAKRHWLHEKE VGLK YKG ADRGRRRIGGAEAVEPSTKFPWSSMRSGR
Subjt:  IRIIEEDKRNMNKQSKSSIVEEGEAKRHWLHEKEPVGLKAYKGSADRGRRRIGGAEAVEPSTKFPWSSMRSGR

A0A6J1JA70 uncharacterized protein LOC1114831161.5e-8494.8Show/hide
Query:  MGSRLGRRVVHFANLPIKLLMPTSFTNITEIALKTIPSASKIEIKRVLESLYGFEVDKVRTLNMEGKKKKRGGLLIAKPDYKKAYVTLRNPLSISPDVYP
        MGSRLGRRVVHFANLPIKLLMPTSFTNITEIALKTIPSASKIEIKRVLESLYGFEVDKVRTLNM+GKKKKRGGLLIAKPDYKKAYVTLRN LSISPDVYP
Subjt:  MGSRLGRRVVHFANLPIKLLMPTSFTNITEIALKTIPSASKIEIKRVLESLYGFEVDKVRTLNMEGKKKKRGGLLIAKPDYKKAYVTLRNPLSISPDVYP

Query:  IRIIEEDKRNMNKQSKSSIVEEGEAKRHWLHEKEPVGLKAYKGSADRGRRRIGGAEAVEPSTKFPWSSMRSGR
        IRIIEEDKRNMNKQSKSSIVEEGEAKRHWLHEKEPVG KAYKG +DR RRR G AE VEPSTKFPWSSMRSGR
Subjt:  IRIIEEDKRNMNKQSKSSIVEEGEAKRHWLHEKEPVGLKAYKGSADRGRRRIGGAEAVEPSTKFPWSSMRSGR

SwissProt top hitse value%identityAlignment
A0KF23 50S ribosomal protein L231.6e-0645.76Show/hide
Query:  IALKTIPSASKIEIKRVLESLYGFEVDKVRTLNMEGKKKKRGGLLIAKPDYKKAYVTLR
        I  K    A+K E+K  +  L+  EV+ VRTLNM+GK K+ G  +  + D+KKAYVTL+
Subjt:  IALKTIPSASKIEIKRVLESLYGFEVDKVRTLNMEGKKKKRGGLLIAKPDYKKAYVTLR

A4ST04 50S ribosomal protein L232.1e-0645.76Show/hide
Query:  IALKTIPSASKIEIKRVLESLYGFEVDKVRTLNMEGKKKKRGGLLIAKPDYKKAYVTLR
        I  K    A+K E+K  +  L+  EV+ VRTLNM+GK K+ G  +  + D+KKAYVTL+
Subjt:  IALKTIPSASKIEIKRVLESLYGFEVDKVRTLNMEGKKKKRGGLLIAKPDYKKAYVTLR

Q0ABH3 50S ribosomal protein L232.1e-0645.76Show/hide
Query:  EIALKTIPSASKIEIKRVLESLYGFEVDKVRTLNMEGKKKKRGGLLIAKPDYKKAYVTL
        E+  K    A K EI++ +E L+  +V  VRT+ M+GK+K+ G L   +PD+KKAYVTL
Subjt:  EIALKTIPSASKIEIKRVLESLYGFEVDKVRTLNMEGKKKKRGGLLIAKPDYKKAYVTL

Q0I161 50S ribosomal protein L231.2e-0642.47Show/hide
Query:  TNITE----IALKTIPSASKIEIKRVLESLYGFEVDKVRTLNMEGKKKKRGGLLIAKPDYKKAYVTLRNPLSI
        TN TE    I  K    A+K+EI   +E L+  +VD VRT+ ++GK K+RG  +  + D+KKAYVTL+   S+
Subjt:  TNITE----IALKTIPSASKIEIKRVLESLYGFEVDKVRTLNMEGKKKKRGGLLIAKPDYKKAYVTLRNPLSI

Q605B4 50S ribosomal protein L239.3e-0741.67Show/hide
Query:  EIALKTIPSASKIEIKRVLESLYGFEVDKVRTLNMEGKKKKRGGLLIAKPDYKKAYVTLR
        +   +  P+ASK++IK  +E ++G +VD VR LN++GK K+ G  +  + D+KKAYV L+
Subjt:  EIALKTIPSASKIEIKRVLESLYGFEVDKVRTLNMEGKKKKRGGLLIAKPDYKKAYVTLR

Arabidopsis top hitse value%identityAlignment
AT4G39880.1 Ribosomal protein L23/L15e family protein3.6e-5465.71Show/hide
Query:  MGSRLGRRVVHFANLPIKLLMPTSFTNITEIALKTIPSASKIEIKRVLESLYGFEVDKVRTLNMEGKKKKRGGLLIAKPDYKKAYVTLRNPLSISPDVYP
        MGSRLG RVVHFANLPIKLLMP   TNI E ALKTIPSASKIEIKRVLESLYGF+V+KV TLNM+GKKKKRGGLLIAK DYKKAYVTLR+PLSIS D++P
Subjt:  MGSRLGRRVVHFANLPIKLLMPTSFTNITEIALKTIPSASKIEIKRVLESLYGFEVDKVRTLNMEGKKKKRGGLLIAKPDYKKAYVTLRNPLSISPDVYP

Query:  IRIIEEDKRNMNKQSKSSIVEEGEAKRHWLHEKEPVGLKAY-KGSADRGRRRIG----GAEAVEPSTKFPWSSMR
        ++ IEED+++  K S S + EE + K HWL  KE   +  Y KG   RG  R      G  A   + KFPWS+MR
Subjt:  IRIIEEDKRNMNKQSKSSIVEEGEAKRHWLHEKEPVGLKAY-KGSADRGRRRIG----GAEAVEPSTKFPWSSMR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAGCAGACTCGGAAGAAGAGTTGTTCACTTCGCTAATCTTCCAATCAAGCTTCTCATGCCGACCTCCTTCACCAACATCACTGAAATTGCTCTCAAAACCATTCC
CTCTGCTTCCAAAATCGAAATCAAGCGCGTCCTCGAGAGCCTCTACGGCTTTGAGGTCGATAAGGTTCGAACTCTGAACATGGAGGGCAAGAAGAAGAAGCGCGGAGGGC
TTTTGATCGCCAAGCCAGATTACAAGAAGGCCTACGTTACTCTCAGGAATCCCTTATCAATTTCTCCGGACGTGTACCCGATCCGGATTATAGAGGAGGACAAGAGGAAT
ATGAATAAACAGTCTAAGTCCAGCATTGTTGAGGAGGGCGAGGCCAAGAGGCATTGGCTTCATGAGAAGGAGCCAGTGGGACTCAAAGCTTACAAGGGTTCTGCTGATAG
AGGCCGCCGACGAATTGGAGGCGCTGAAGCTGTTGAACCATCAACTAAGTTTCCTTGGAGTAGCATGAGGTCTGGTAGGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGAAGCAGACTCGGAAGAAGAGTTGTTCACTTCGCTAATCTTCCAATCAAGCTTCTCATGCCGACCTCCTTCACCAACATCACTGAAATTGCTCTCAAAACCATTCC
CTCTGCTTCCAAAATCGAAATCAAGCGCGTCCTCGAGAGCCTCTACGGCTTTGAGGTCGATAAGGTTCGAACTCTGAACATGGAGGGCAAGAAGAAGAAGCGCGGAGGGC
TTTTGATCGCCAAGCCAGATTACAAGAAGGCCTACGTTACTCTCAGGAATCCCTTATCAATTTCTCCGGACGTGTACCCGATCCGGATTATAGAGGAGGACAAGAGGAAT
ATGAATAAACAGTCTAAGTCCAGCATTGTTGAGGAGGGCGAGGCCAAGAGGCATTGGCTTCATGAGAAGGAGCCAGTGGGACTCAAAGCTTACAAGGGTTCTGCTGATAG
AGGCCGCCGACGAATTGGAGGCGCTGAAGCTGTTGAACCATCAACTAAGTTTCCTTGGAGTAGCATGAGGTCTGGTAGGTAG
Protein sequenceShow/hide protein sequence
MGSRLGRRVVHFANLPIKLLMPTSFTNITEIALKTIPSASKIEIKRVLESLYGFEVDKVRTLNMEGKKKKRGGLLIAKPDYKKAYVTLRNPLSISPDVYPIRIIEEDKRN
MNKQSKSSIVEEGEAKRHWLHEKEPVGLKAYKGSADRGRRRIGGAEAVEPSTKFPWSSMRSGR