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Lag0019037 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0019037
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionTetratricopeptide-like helical
Genome locationchr5:37878020..37878415
RNA-Seq ExpressionLag0019037
SyntenyLag0019037
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044707.1 Tetratricopeptide-like helical [Cucumis melo var. makuwa]9.4e-3368.07Show/hide
Query:  MSVSLEALAMAGIDSNEWAMDAEEWERNEMENDVPPHLLAEEEEDDDDENITSTASNDYEFPATGFFGSWRRKDGGADGVHCISGMLFCLRRSIEKKASN
        MSVSLEALAMAGIDSNEW MDA+EWERNE++  VPPHLLA+EE+D+D E +TST SN Y F   G FG WRR+D  ADG H I G+ + L + IEK+ASN
Subjt:  MSVSLEALAMAGIDSNEWAMDAEEWERNEMENDVPPHLLAEEEEDDDDENITSTASNDYEFPATGFFGSWRRKDGGADGVHCISGMLFCLRRSIEKKASN

Query:  GVSSVRIMVRTIVGFLMVM
        G++SVRI+VRTI+GFLMVM
Subjt:  GVSSVRIMVRTIVGFLMVM

KAG6577295.1 hypothetical protein SDJN03_24869, partial [Cucurbita argyrosperma subsp. sororia]1.2e-4070.99Show/hide
Query:  MSVSLEALAMAGIDSNEWAMDAEEWERNEMENDVPPHLLAEEEEDDDDENITSTASNDYEFPATGFFGSWRRKDGGADGVHCISGMLFCLRRSIEKKASN
        MSVSLEALAMAGI SNEWAMDAEEWERNE+ENDVPPHLLA  +EDDDD+N+TST SN Y FP  GFF S RR+DGGA  +HC  G+L  L +S+EK+ASN
Subjt:  MSVSLEALAMAGIDSNEWAMDAEEWERNEMENDVPPHLLAEEEEDDDDENITSTASNDYEFPATGFFGSWRRKDGGADGVHCISGMLFCLRRSIEKKASN

Query:  GVSSVRIMVRTIVGFLMVMAMKIISAQRSKL
        G+SSVRI+VRTI+GFL+V  +KIISA  S +
Subjt:  GVSSVRIMVRTIVGFLMVMAMKIISAQRSKL

KAG7015383.1 hypothetical protein SDJN02_23018, partial [Cucurbita argyrosperma subsp. argyrosperma]7.2e-4170.99Show/hide
Query:  MSVSLEALAMAGIDSNEWAMDAEEWERNEMENDVPPHLLAEEEEDDDDENITSTASNDYEFPATGFFGSWRRKDGGADGVHCISGMLFCLRRSIEKKASN
        MSVSLEALAMAGI SNEWAMDAEEWERNE+ENDVPPHLLA  +EDDDD+N+TST SN Y FP  GFF S  R+DGGAD +HC  G+L  L +S+EK+ASN
Subjt:  MSVSLEALAMAGIDSNEWAMDAEEWERNEMENDVPPHLLAEEEEDDDDENITSTASNDYEFPATGFFGSWRRKDGGADGVHCISGMLFCLRRSIEKKASN

Query:  GVSSVRIMVRTIVGFLMVMAMKIISAQRSKL
        G+SSVRI+VRTI+GFL+V  +KIISA  S +
Subjt:  GVSSVRIMVRTIVGFLMVMAMKIISAQRSKL

TYK16880.1 Tetratricopeptide-like helical [Cucumis melo var. makuwa]1.1e-3668.7Show/hide
Query:  MSVSLEALAMAGIDSNEWAMDAEEWERNEMENDVPPHLLAEEEEDDDDENITSTASNDYEFPATGFFGSWRRKDGGADGVHCISGMLFCLRRSIEKKASN
        MSVSLEALAMAGIDSNEW MDA+EWERNE++  VPPHLLA+EE+D+D E +TST SN Y F   G FG WRR+D  ADG   I G+ + L + IEK+ASN
Subjt:  MSVSLEALAMAGIDSNEWAMDAEEWERNEMENDVPPHLLAEEEEDDDDENITSTASNDYEFPATGFFGSWRRKDGGADGVHCISGMLFCLRRSIEKKASN

Query:  GVSSVRIMVRTIVGFLMVMAMKIISAQRSKL
        G++SVRI+VRTI+GFLMVM MKIISAQRSK+
Subjt:  GVSSVRIMVRTIVGFLMVMAMKIISAQRSKL

XP_022943015.1 uncharacterized protein LOC111447880 [Cucurbita moschata]3.8e-2658.46Show/hide
Query:  MSVSLEALAMAGIDSNEWAMDAEEWERNEMENDVPPHLLAEEEEDDDDENITSTASNDYEFPATGFFGSWRRKDGGADGVHCISGMLFCLRRSIEKKASN
        MSVSLEALAMAGIDSNEWAMDAEEWERNEME D+PPHLLA+E   DD+E+  ST     +FPAT    S  RKD G  GV C   +++ LR+  EK+  N
Subjt:  MSVSLEALAMAGIDSNEWAMDAEEWERNEMENDVPPHLLAEEEEDDDDENITSTASNDYEFPATGFFGSWRRKDGGADGVHCISGMLFCLRRSIEKKASN

Query:  GVSSVRIMVRTIVGFLMVMAMKIISAQRSK
         +SS+ I+   +VGFLM M +KII+++RSK
Subjt:  GVSSVRIMVRTIVGFLMVMAMKIISAQRSK

TrEMBL top hitse value%identityAlignment
A0A0A0KU90 Uncharacterized protein5.4e-1050.49Show/hide
Query:  MSVSLEALAMAGIDSNEWAMDAEEWERN--EMEND--VPPHLLAEEEEDDDDENITSTASNDYEFPATGFFGSWRRKDGGADGVHCISGMLFCLRRSIEK
        M VSLEALAMAGIDSNEWAMDAEEW+ N  +MEND  +PPHLLA    D+D+ENI           A     S  RKD G             LR+ +EK
Subjt:  MSVSLEALAMAGIDSNEWAMDAEEWERN--EMEND--VPPHLLAEEEEDDDDENITSTASNDYEFPATGFFGSWRRKDGGADGVHCISGMLFCLRRSIEK

Query:  KAS
        +AS
Subjt:  KAS

A0A0A0KWE7 Uncharacterized protein2.9e-3567.16Show/hide
Query:  MSVSLEALAMAGIDSNEWAMDAEEWERNEMENDVPPHLLAEEEEDDD-DENITSTASNDYEFPATGFFGSWRRKDGGADG--VHCISGMLFCLRRSIEKK
        MSVSLEALAMAGIDSNEWAMDAEEWERNE++  VPPHLLA+EE+D+D DE++T++  ++Y FP  G F  WR +D  ADG   H I G+   L + IEK+
Subjt:  MSVSLEALAMAGIDSNEWAMDAEEWERNEMENDVPPHLLAEEEEDDD-DENITSTASNDYEFPATGFFGSWRRKDGGADG--VHCISGMLFCLRRSIEKK

Query:  ASNGVSSVRIMVRTIVGFLMVMAMKIISAQRSKL
        ASNG+SSVRI+VRTI+GFLMVM MKIISAQRSK+
Subjt:  ASNGVSSVRIMVRTIVGFLMVMAMKIISAQRSKL

A0A5A7TS68 Tetratricopeptide-like helical4.6e-3368.07Show/hide
Query:  MSVSLEALAMAGIDSNEWAMDAEEWERNEMENDVPPHLLAEEEEDDDDENITSTASNDYEFPATGFFGSWRRKDGGADGVHCISGMLFCLRRSIEKKASN
        MSVSLEALAMAGIDSNEW MDA+EWERNE++  VPPHLLA+EE+D+D E +TST SN Y F   G FG WRR+D  ADG H I G+ + L + IEK+ASN
Subjt:  MSVSLEALAMAGIDSNEWAMDAEEWERNEMENDVPPHLLAEEEEDDDDENITSTASNDYEFPATGFFGSWRRKDGGADGVHCISGMLFCLRRSIEKKASN

Query:  GVSSVRIMVRTIVGFLMVM
        G++SVRI+VRTI+GFLMVM
Subjt:  GVSSVRIMVRTIVGFLMVM

A0A5D3CZU0 Tetratricopeptide-like helical5.2e-3768.7Show/hide
Query:  MSVSLEALAMAGIDSNEWAMDAEEWERNEMENDVPPHLLAEEEEDDDDENITSTASNDYEFPATGFFGSWRRKDGGADGVHCISGMLFCLRRSIEKKASN
        MSVSLEALAMAGIDSNEW MDA+EWERNE++  VPPHLLA+EE+D+D E +TST SN Y F   G FG WRR+D  ADG   I G+ + L + IEK+ASN
Subjt:  MSVSLEALAMAGIDSNEWAMDAEEWERNEMENDVPPHLLAEEEEDDDDENITSTASNDYEFPATGFFGSWRRKDGGADGVHCISGMLFCLRRSIEKKASN

Query:  GVSSVRIMVRTIVGFLMVMAMKIISAQRSKL
        G++SVRI+VRTI+GFLMVM MKIISAQRSK+
Subjt:  GVSSVRIMVRTIVGFLMVMAMKIISAQRSKL

A0A6J1FX98 uncharacterized protein LOC1114478801.9e-2658.46Show/hide
Query:  MSVSLEALAMAGIDSNEWAMDAEEWERNEMENDVPPHLLAEEEEDDDDENITSTASNDYEFPATGFFGSWRRKDGGADGVHCISGMLFCLRRSIEKKASN
        MSVSLEALAMAGIDSNEWAMDAEEWERNEME D+PPHLLA+E   DD+E+  ST     +FPAT    S  RKD G  GV C   +++ LR+  EK+  N
Subjt:  MSVSLEALAMAGIDSNEWAMDAEEWERNEMENDVPPHLLAEEEEDDDDENITSTASNDYEFPATGFFGSWRRKDGGADGVHCISGMLFCLRRSIEKKASN

Query:  GVSSVRIMVRTIVGFLMVMAMKIISAQRSK
         +SS+ I+   +VGFLM M +KII+++RSK
Subjt:  GVSSVRIMVRTIVGFLMVMAMKIISAQRSK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G22320.1 unknown protein2.6e-0450.98Show/hide
Query:  LEALAMAGIDSNEWAMDAEEWERNEMENDVPPHLLA-----EEEEDDDDEN
        +EALAMAG+D  EW +  EEWE    E+ VP HLLA     EE+E+D  +N
Subjt:  LEALAMAGIDSNEWAMDAEEWERNEMENDVPPHLLA-----EEEEDDDDEN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGGTTTCTTTGGAAGCTTTGGCAATGGCGGGGATTGATTCTAATGAGTGGGCTATGGACGCTGAAGAATGGGAAAGAAATGAAATGGAGAACGACGTTCCGCCGCA
TTTGTTAGCAGAGGAAGAGGAAGACGACGATGACGAAAACATAACGAGCACTGCGAGTAACGACTATGAGTTTCCGGCCACCGGATTCTTTGGCAGCTGGCGCCGGAAAG
ATGGCGGAGCTGATGGTGTCCATTGCATCTCGGGCATGTTGTTCTGTTTGAGGAGAAGCATAGAGAAGAAGGCTTCTAATGGGGTGAGCTCTGTGAGAATAATGGTGAGA
ACTATTGTAGGGTTTCTGATGGTGATGGCCATGAAGATAATTAGTGCTCAAAGATCCAAGTTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCGGTTTCTTTGGAAGCTTTGGCAATGGCGGGGATTGATTCTAATGAGTGGGCTATGGACGCTGAAGAATGGGAAAGAAATGAAATGGAGAACGACGTTCCGCCGCA
TTTGTTAGCAGAGGAAGAGGAAGACGACGATGACGAAAACATAACGAGCACTGCGAGTAACGACTATGAGTTTCCGGCCACCGGATTCTTTGGCAGCTGGCGCCGGAAAG
ATGGCGGAGCTGATGGTGTCCATTGCATCTCGGGCATGTTGTTCTGTTTGAGGAGAAGCATAGAGAAGAAGGCTTCTAATGGGGTGAGCTCTGTGAGAATAATGGTGAGA
ACTATTGTAGGGTTTCTGATGGTGATGGCCATGAAGATAATTAGTGCTCAAAGATCCAAGTTGTGA
Protein sequenceShow/hide protein sequence
MSVSLEALAMAGIDSNEWAMDAEEWERNEMENDVPPHLLAEEEEDDDDENITSTASNDYEFPATGFFGSWRRKDGGADGVHCISGMLFCLRRSIEKKASNGVSSVRIMVR
TIVGFLMVMAMKIISAQRSKL