; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0019044 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0019044
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonuclease H-like superfamily protein
Genome locationchr5:37959554..37960840
RNA-Seq ExpressionLag0019044
SyntenyLag0019044
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR026960 - Reverse transcriptase zinc-binding domain
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF4364303.1 hypothetical protein G4B88_028423 [Cannabis sativa]1.6e-3430.69Show/hide
Query:  SGQWNEGLIQQHFSPQEVGLILSIPVWVGAE-DKFVWHYEKSGLFSVKSGYRLGQSAWLAQFPSSSSNESIMGWWKGVWKMLIPNKIKIFLWRLSLDRLP
        +G WN  L++  F    V  ILS+P    ++ D + W +  SG +SV++GY + + A     PSSS+ E++  WWK +W++ IP KI+ F++RL+   LP
Subjt:  SGQWNEGLIQQHFSPQEVGLILSIPVWVGAE-DKFVWHYEKSGLFSVKSGYRLGQSAWLAQFPSSSSNESIMGWWKGVWKMLIPNKIKIFLWRLSLDRLP

Query:  TIDNLGIRGCDVLNVCGLCGQGGESSLHVFWHCKRCRAGSMFDLLREVRDEVGW-ERFGLFVVVLWPVWNCRNQRKFRGLEPVVGLVEW-ATSYISSFQQ
        T +NL  R C    +C  C    ES  H  + C+  +                W + F LF+ +LW  WN RN   FR        +E  A  Y++ +Q 
Subjt:  TIDNLGIRGCDVLNVCGLCGQGGESSLHVFWHCKRCRAGSMFDLLREVRDEVGW-ERFGLFVVVLWPVWNCRNQRKFRGLEPVVGLVEW-ATSYISSFQQ

Query:  AISACGVGVQSVAAREDVRWSPPEAGWYKVNVDASFRRERWQAGLGVVVRDSSGRVMLSASLVQRHVRSPKMAEGWAAVKGTRLAVEMGL
        A        QS + R+ + W PP  G+ K+N DA+    + + G G +VRD +G+++ + +  +     P+ AEGWA ++  +   + G+
Subjt:  AISACGVGVQSVAAREDVRWSPPEAGWYKVNVDASFRRERWQAGLGVVVRDSSGRVMLSASLVQRHVRSPKMAEGWAAVKGTRLAVEMGL

KAF4401718.1 hypothetical protein G4B88_000766 [Cannabis sativa]7.3e-3529.93Show/hide
Query:  MTTSGQWNEGLIQQHFSPQEVGLILSIPVWVGAEDKFVWHYEKSGLFSVKSGYRLGQSAWLAQFPSSSSN-ESIMGWWKGVWKMLIPNKIKIFLWRLSLD
        + + GQW    +Q+HF  +++  +  IP+ +  ED   W Y  +G + VKSGYR+G+   L   P+ SSN E I  WWK +W M +P ++K+F WR+  +
Subjt:  MTTSGQWNEGLIQQHFSPQEVGLILSIPVWVGAEDKFVWHYEKSGLFSVKSGYRLGQSAWLAQFPSSSSN-ESIMGWWKGVWKMLIPNKIKIFLWRLSLD

Query:  RLPTIDNLGIRGCDVLNVCGLCGQGGESSLHVFWHCKRCRA----------------GSMFDLLREVRDEVGWERFGLFVVVLWPVWNCRNQRKFRGLEP
         LP   NL  RG DV   C LCG   E+  H  W C + +                 GSMFD++  ++D +    F   + ++W +W  RN  K+    P
Subjt:  RLPTIDNLGIRGCDVLNVCGLCGQGGESSLHVFWHCKRCRA----------------GSMFDLLREVRDEVGWERFGLFVVVLWPVWNCRNQRKFRGLEP

Query:  V---VGLVEW-ATSYISSFQQAISACGVGVQSVAAREDVRWSPPEAGWYKVNVDASFRRERWQAGLGVVVRDSSGRVMLSASLVQRHVRSPKMAEGWAAV
        V   + L++W +T+Y  S         + ++    +   +W  P  G   VN DA+        G G + RD  G ++L+  +  +   S +MAE WA +
Subjt:  V---VGLVEW-ATSYISSFQQAISACGVGVQSVAAREDVRWSPPEAGWYKVNVDASFRRERWQAGLGVVVRDSSGRVMLSASLVQRHVRSPKMAEGWAAV

Query:  KGTR
        +  +
Subjt:  KGTR

KAF8408042.1 hypothetical protein HHK36_007182 [Tetracentron sinense]1.2e-3433.33Show/hide
Query:  WNEGLIQQHFSPQEVGLILSIPVWVG-AEDKFVWHYEKSGLFSVKSGYRL------GQSAWLAQFPSSSSNESIMG-WWKGVWKMLIPNKIKIFLWRLSL
        WN  L+   F P E  LI SIP+      DK VWH+   G FSV+S Y L       +SA  +   S S N S+ G  W  VW++ IP K+KIF+W+++L
Subjt:  WNEGLIQQHFSPQEVGLILSIPVWVG-AEDKFVWHYEKSGLFSVKSGYRL------GQSAWLAQFPSSSSNESIMG-WWKGVWKMLIPNKIKIFLWRLSL

Query:  DRLPTIDNLGIRGCDVLNVCGLCGQGGESSLHVFWHCKRCR----------------AGSMFDLLREVRDEVGWERFGLFVVVLWPVWNCRNQRKFRGLE
        + LP   NL  R   V NVCG+CG+ GE+ LHV  +C   R                A S+   + E+    G E    F ++ W +W  RN+  F G++
Subjt:  DRLPTIDNLGIRGCDVLNVCGLCGQGGESSLHVFWHCKRCR----------------AGSMFDLLREVRDEVGWERFGLFVVVLWPVWNCRNQRKFRGLE

Query:  PV-VGLVEWATSYISSFQQAISACGVGVQSVAAREDVRWSPPEAGWYKVNVDASFRRERWQAGLGVVVRDSSGRVMLSASLVQRHVRSPKMAEGWAAVKG
              V+ A   ++ F  A        +S++A     W  P    +KVN+D +   E   AG+GVVVRD +G ++ + S    + +S  + E  AA +G
Subjt:  PV-VGLVEWATSYISSFQQAISACGVGVQSVAAREDVRWSPPEAGWYKVNVDASFRRERWQAGLGVVVRDSSGRVMLSASLVQRHVRSPKMAEGWAAVKG

Query:  TRLAVEMGL
         + A+E+G+
Subjt:  TRLAVEMGL

XP_022150918.1 uncharacterized protein LOC111018954 [Momordica charantia]3.5e-6142.09Show/hide
Query:  GQWNEGLIQQHFSPQEVGLILSIPVWVGA-EDKFVWHYEKSGLFSVKSGYRLG-QSAWLAQFPSSSSNESIMGWWKGVWKMLIPNKIKIFLWRLSLDRLP
        G W   +++  F+P E   ILSIP+  GA ED+ +W+YEK+G++SV+SGY++   +    Q PSSSS+E +  WW G WKM IPNKIK+FLWRL LDRLP
Subjt:  GQWNEGLIQQHFSPQEVGLILSIPVWVGA-EDKFVWHYEKSGLFSVKSGYRLG-QSAWLAQFPSSSSNESIMGWWKGVWKMLIPNKIKIFLWRLSLDRLP

Query:  TIDNLGIRGCDVLNVCGLCGQGGESSLHVFWHCKRCRA---------GSMFDLLREVRDEVGWERFGLFVVVLWPVWNCRNQRKFRGLEPVV-----GLV
        T  NL  RG ++ N C  CG+ GE S+H+FW CK   A          S F +LRE  + +    F    VV+W +WN RN R F      V      LV
Subjt:  TIDNLGIRGCDVLNVCGLCGQGGESSLHVFWHCKRCRA---------GSMFDLLREVRDEVGWERFGLFVVVLWPVWNCRNQRKFRGLEPVV-----GLV

Query:  EWATSYISSFQQAISACGVGVQSVAAREDVRWSPPEAGWYKVNVDASFRRERWQAGLGVVVRDSSGRVMLSASLVQRHVRSPKMAEGWAAVKGTRLAVEM
        EWA  Y   F++A S    G   V    ++ W PP+ G YK+N DASF      AGLG+++ +  G+VM +A+    +++S  MAE  AAV+G +LA E+
Subjt:  EWATSYISSFQQAISACGVGVQSVAAREDVRWSPPEAGWYKVNVDASFRRERWQAGLGVVVRDSSGRVMLSASLVQRHVRSPKMAEGWAAVKGTRLAVEM

Query:  GLGPWCWRLTPVGWLV
        G+ P    L+  G +V
Subjt:  GLGPWCWRLTPVGWLV

XP_024037590.1 uncharacterized protein LOC112097210 [Citrus clementina]6.0e-3733.53Show/hide
Query:  QWNEGLIQQHFSPQEVGLILSIPV-WVGAEDKFVWHYEKSGLFSVKSGYRLGQSAWLAQFPSSSSNESIMGWWKGVWKMLIPNKIKIFLWRLSLDRLPTI
        QW E LI QHF P++   I+ IP+     ED+ +WHY+K G +SVKSGY++       + PS S+++  +  W+ +WK+ IP K+KIFLWR + D LPT 
Subjt:  QWNEGLIQQHFSPQEVGLILSIPV-WVGAEDKFVWHYEKSGLFSVKSGYRLGQSAWLAQFPSSSSNESIMGWWKGVWKMLIPNKIKIFLWRLSLDRLPTI

Query:  DNLGIRGCDVLNVCGLCGQGGESSLHVFWHCKRCRA----GSMFDLLREV-RDEVGW-----------ERFGLFVVVLWPVWNCRNQRKFRG-LEPVVGL
        +NL  +      +C  C    E+  H    C R R      ++ + LR V R ++ W                   +LW +W  RN+  F G  E  + +
Subjt:  DNLGIRGCDVLNVCGLCGQGGESSLHVFWHCKRCRA----GSMFDLLREV-RDEVGW-----------ERFGLFVVVLWPVWNCRNQRKFRG-LEPVVGL

Query:  VEWATSYISSFQQAISACGVGVQSVAAREDVRWSPPEAGWYKVNVDASFRRERWQAGLGVVVRDSSGRVMLSASLVQRHVRSPKMAEGWAAVKGTRLA--
        V  A + + SF++      V      A    +WSPP  GW KVNVDA+   E   AGLGVVVRDS G    +A    R   S  MAE  A   G ++A  
Subjt:  VEWATSYISSFQQAISACGVGVQSVAAREDVRWSPPEAGWYKVNVDASFRRERWQAGLGVVVRDSSGRVMLSASLVQRHVRSPKMAEGWAAVKGTRLA--

Query:  --VEMG------------LGPWCWRLTPVGWLVS
          +  G            +      LT +GWL+S
Subjt:  --VEMG------------LGPWCWRLTPVGWLVS

TrEMBL top hitse value%identityAlignment
A0A6J1DAR4 uncharacterized protein LOC1110189541.7e-6142.09Show/hide
Query:  GQWNEGLIQQHFSPQEVGLILSIPVWVGA-EDKFVWHYEKSGLFSVKSGYRLG-QSAWLAQFPSSSSNESIMGWWKGVWKMLIPNKIKIFLWRLSLDRLP
        G W   +++  F+P E   ILSIP+  GA ED+ +W+YEK+G++SV+SGY++   +    Q PSSSS+E +  WW G WKM IPNKIK+FLWRL LDRLP
Subjt:  GQWNEGLIQQHFSPQEVGLILSIPVWVGA-EDKFVWHYEKSGLFSVKSGYRLG-QSAWLAQFPSSSSNESIMGWWKGVWKMLIPNKIKIFLWRLSLDRLP

Query:  TIDNLGIRGCDVLNVCGLCGQGGESSLHVFWHCKRCRA---------GSMFDLLREVRDEVGWERFGLFVVVLWPVWNCRNQRKFRGLEPVV-----GLV
        T  NL  RG ++ N C  CG+ GE S+H+FW CK   A          S F +LRE  + +    F    VV+W +WN RN R F      V      LV
Subjt:  TIDNLGIRGCDVLNVCGLCGQGGESSLHVFWHCKRCRA---------GSMFDLLREVRDEVGWERFGLFVVVLWPVWNCRNQRKFRGLEPVV-----GLV

Query:  EWATSYISSFQQAISACGVGVQSVAAREDVRWSPPEAGWYKVNVDASFRRERWQAGLGVVVRDSSGRVMLSASLVQRHVRSPKMAEGWAAVKGTRLAVEM
        EWA  Y   F++A S    G   V    ++ W PP+ G YK+N DASF      AGLG+++ +  G+VM +A+    +++S  MAE  AAV+G +LA E+
Subjt:  EWATSYISSFQQAISACGVGVQSVAAREDVRWSPPEAGWYKVNVDASFRRERWQAGLGVVVRDSSGRVMLSASLVQRHVRSPKMAEGWAAVKGTRLAVEM

Query:  GLGPWCWRLTPVGWLV
        G+ P    L+  G +V
Subjt:  GLGPWCWRLTPVGWLV

A0A803PEK8 Uncharacterized protein2.8e-4034.93Show/hide
Query:  GQWNEGLIQQHFSPQEVGLILSIPV--WVGAEDKFVWHYEKSGLFSVKSGYRLGQSAWLAQFPSSSSNESIMGWWKGVWKMLIPNKIKIFLWRLSLDRLP
        G+W+E  ++  F+ ++  LILS P   W   EDK +WHY K+G ++VKSGY++  S    Q+   S ++  + WWK +W + IP KIK F+W+L+ + +P
Subjt:  GQWNEGLIQQHFSPQEVGLILSIPV--WVGAEDKFVWHYEKSGLFSVKSGYRLGQSAWLAQFPSSSSNESIMGWWKGVWKMLIPNKIKIFLWRLSLDRLP

Query:  TIDNLGIRGCDVLNVCGLC-GQGGESSLHVFWHCKRCR----AGSMFDLLREVRDE----------VGWE--RFGLFVVVLWPVWNCRNQRKFRGLEPVV
        T  NL  RG  + N+C  C G   E++ H  W CKR +       + D +++++ E            W+  RF  F+V+ W +WN RN     G  P+ 
Subjt:  TIDNLGIRGCDVLNVCGLC-GQGGESSLHVFWHCKRCR----AGSMFDLLREVRDE----------VGWE--RFGLFVVVLWPVWNCRNQRKFRGLEPVV

Query:  G-LVEWATSYISSFQQAISACGVGVQSVAAREDVRWSPPEAGWYKVNVDASFRRERWQAGLGVVVRDSSGRV
        G +V+W  ++++ FQ      G  V S   RE+ +W  P+ G  K+NVDA  +     +GLG V RD  GRV
Subjt:  G-LVEWATSYISSFQQAISACGVGVQSVAAREDVRWSPPEAGWYKVNVDASFRRERWQAGLGVVVRDSSGRV

A0A803PRL1 Uncharacterized protein7.6e-3830.39Show/hide
Query:  SGQWNEGLIQQHFSPQEVGLILSIPVWVGAE-DKFVWHYEKSGLFSVKSGYRLGQSAWLAQFPSSSSNESIMGWWKGVWKMLIPNKIKIFLWRLSLDRLP
        +G WN  L++ +F    V  ILS+P    ++ D + W +  SG +SV++GY + + A     PSSS+ E++  WWK +W++ IP KI+ F++RL+   LP
Subjt:  SGQWNEGLIQQHFSPQEVGLILSIPVWVGAE-DKFVWHYEKSGLFSVKSGYRLGQSAWLAQFPSSSSNESIMGWWKGVWKMLIPNKIKIFLWRLSLDRLP

Query:  TIDNLGIRGCDVLNVCGLCGQGGESSLHVFWHCKRCRAG----------------SMFDLLREVRDEVGWERFGLFVVVLWPVWNCRNQRKFRG--LEPV
        T +NL  R C    +C  C    ES  H  + C+  +                  ++FD+L  ++     + F LF+ +LW  WN RN   FR   L P 
Subjt:  TIDNLGIRGCDVLNVCGLCGQGGESSLHVFWHCKRCRAG----------------SMFDLLREVRDEVGWERFGLFVVVLWPVWNCRNQRKFRG--LEPV

Query:  VGLVEWATSYISSFQQAISACGVGVQSVAAREDVRWSPPEAGWYKVNVDASFRRERWQAGLGVVVRDSSGRVMLSASLVQRHVRSPKMAEGWAAVKGTRL
          + + A  Y++ +Q A+   G   QS + R+ + W PP  G  K+N DA+    + + G G +VRD +G+++ + +  +     P+ AEGWA ++  + 
Subjt:  VGLVEWATSYISSFQQAISACGVGVQSVAAREDVRWSPPEAGWYKVNVDASFRRERWQAGLGVVVRDSSGRVMLSASLVQRHVRSPKMAEGWAAVKGTRL

Query:  AVEMGL
          + G+
Subjt:  AVEMGL

A0A803QE56 Uncharacterized protein3.4e-3832.9Show/hide
Query:  SGQWNEGLIQQHFSPQEVGLILSIPV--WVGAEDKFVWHYEKSGLFSVKSGYRLGQSAWLAQFPSSSSNESIMGWWKGVWKMLIPNKIKIFLWRLSLDRL
        +G W+E  ++  F+ ++  +IL +P   W   EDK +WHY K+G +SVKSGY +     L +  + S+ + +M WW+G+WK+ +P K+K F+W+++   L
Subjt:  SGQWNEGLIQQHFSPQEVGLILSIPV--WVGAEDKFVWHYEKSGLFSVKSGYRLGQSAWLAQFPSSSSNESIMGWWKGVWKMLIPNKIKIFLWRLSLDRL

Query:  PTIDNLGIRGCDVLNVCGLCGQGG-ESSLHVFWHC-------KRC-------RAGSMFDLLREVRDEVGWER--FGLFVVVLWPVWNCRNQRKFRGLEP-
        PT   L  RG DV   C  C  GG E+  H  W C       KR        R GS   L   +R    WE+  F LF+VV W +W  RN  K  G++P 
Subjt:  PTIDNLGIRGCDVLNVCGLCGQGG-ESSLHVFWHC-------KRC-------RAGSMFDLLREVRDEVGWER--FGLFVVVLWPVWNCRNQRKFRGLEP-

Query:  VVGLVEWATSYISSFQQAISACGVGVQSVAAREDVRWSPPEAGWYKVNVDASFRRERWQAGLGVVVRDSSGRVMLSASLVQRHVRSPKMAEGWAAVKGTR
           + EW   Y+  ++      G G      R       P  G +K+NVDA  +R R  +G+  V++DSSG V  ++S +      P  AE  A   G +
Subjt:  VVGLVEWATSYISSFQQAISACGVGVQSVAAREDVRWSPPEAGWYKVNVDASFRRERWQAGLGVVVRDSSGRVMLSASLVQRHVRSPKMAEGWAAVKGTR

Query:  LAVEMGL
          ++ G+
Subjt:  LAVEMGL

A0A803QQT2 Uncharacterized protein1.6e-4034.64Show/hide
Query:  GQWNEGLIQQHFSPQEVGLILSIPV--WVGAEDKFVWHYEKSGLFSVKSGYRLGQSAWLAQFPSSSSNESIMGWWKGVWKMLIPNKIKIFLWRLSLDRLP
        GQW+EG I+  F+P +V LIL IP   W   EDK +WHY K G +SVKSGYR+  S    Q    S+  SI+ WWK +W++ IP K+K F+W+++ + LP
Subjt:  GQWNEGLIQQHFSPQEVGLILSIPV--WVGAEDKFVWHYEKSGLFSVKSGYRLGQSAWLAQFPSSSSNESIMGWWKGVWKMLIPNKIKIFLWRLSLDRLP

Query:  TIDNLGIRGCDVLNVCGLCGQG-GESSLHVFWHCKRC----RAGSMFDLLREVRDE----------VGW--ERFGLFVVVLWPVWNCRNQRKFRGLEP-V
           NL  RG     VC  C     ES  H  W CK      R   ++D L+++  E            W  E+   F++V W +WN RN     G  P  
Subjt:  TIDNLGIRGCDVLNVCGLCGQG-GESSLHVFWHCKRC----RAGSMFDLLREVRDE----------VGW--ERFGLFVVVLWPVWNCRNQRKFRGLEP-V

Query:  VGLVEWATSYISSFQQAISACGVGVQSVAAREDVRWSPPEAGWYKVNVDASFRRERWQAGLGVVVRDSSGRVMLSASLVQRHVRSPKMAEGWAAVKGTRL
          ++EW  ++++ F+          +S  + ED RW PP      +NVDA  ++    +GLG VVRD++G V+ +A+ V +    P   E  A  KG ++
Subjt:  VGLVEWATSYISSFQQAISACGVGVQSVAAREDVRWSPPEAGWYKVNVDASFRRERWQAGLGVVVRDSSGRVMLSASLVQRHVRSPKMAEGWAAVKGTRL

Query:  AVEMGL
         ++  L
Subjt:  AVEMGL

SwissProt top hitse value%identityAlignment
P0C2F6 Putative ribonuclease H protein At1g657503.2e-1726.24Show/hide
Query:  GAEDKFVWHYEKSGLFSVKSGYRLGQSAWLAQFPSSSSNESIMGWWKGVWKMLIPNKIKIFLWRLSLDRLPTIDNLGIRGCDVLNVCGLCGQGGESSLHV
        GA D+  W + + G FSV+S Y +     + + P      ++  ++  +WK+ +P ++K FLW +    + T +    R     NVC +C  G ES LHV
Subjt:  GAEDKFVWHYEKSGLFSVKSGYRLGQSAWLAQFPSSSSNESIMGWWKGVWKMLIPNKIKIFLWRLSLDRLPTIDNLGIRGCDVLNVCGLCGQGGESSLHV

Query:  FWHC------------KRCRAG----SMFDLL------REVRDEVGWERFGLFVVVLWPVWNCRNQRKF----RGLEPVVGLVEWATSYISSFQQAISAC
           C            +R + G    S+F+ L      R   +++ W    +F V++W  W  R    F    +  + V  + EWA     +    +   
Subjt:  FWHC------------KRCRAG----SMFDLL------REVRDEVGWERFGLFVVVLWPVWNCRNQRKF----RGLEPVVGLVEWATSYISSFQQAISAC

Query:  GVGVQSVAAREDVRWSPPEAGWYKVNVDASFRRERWQAGLGVVVRDSSGRVMLSASLVQRHVRSPKMAEGWAAVKGTRLAVE
         VG+        + W  P  GW KVN D + R     A  G V+RD +G      SL      +P+ AE W    G   A E
Subjt:  GVGVQSVAAREDVRWSPPEAGWYKVNVDASFRRERWQAGLGVVVRDSSGRVMLSASLVQRHVRSPKMAEGWAAVKGTRLAVE

Arabidopsis top hitse value%identityAlignment
AT2G02650.1 Ribonuclease H-like superfamily protein6.6e-1022.17Show/hide
Query:  KGVWKMLIPNKIKIFLWRLSLDRLPTIDNLGIRGCDVLNVCGLCGQGGESSLHVFWHCKRCRA---------------GSMFD-------LLREVRDEVG
        + +WK+ +  KIK FLWR     L T   L  R  D   +C  C    E+  H+ ++C   ++                S F+        L + +    
Subjt:  KGVWKMLIPNKIKIFLWRLSLDRLPTIDNLGIRGCDVLNVCGLCGQGGESSLHVFWHCKRCRA---------------GSMFD-------LLREVRDEVG

Query:  WERFGLFVVVLWPVWNCRN----QRK-----FRGLEPVVGLVEWATSYISSFQQAISACGVGVQSVAAREDVRWSPPEAGWYKVNVDASFRRERWQAGLG
         +RF L   ++W +W  RN    Q+K     +   + +    EW  +  ++    +      +Q+ + R+  +W+PP  GW K N D+ + +       G
Subjt:  WERFGLFVVVLWPVWNCRN----QRK-----FRGLEPVVGLVEWATSYISSFQQAISACGVGVQSVAAREDVRWSPPEAGWYKVNVDASFRRERWQAGLG

Query:  VVVRDSSGRVML
          +R+ +G ++L
Subjt:  VVVRDSSGRVML

AT2G34320.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein7.6e-0628.43Show/hide
Query:  VLWPVWNCRNQRKFRGLE---------PVVGLVEWATSYISSFQQAISACGVGVQSVAAREDVRWSPPEAGWYKVNVDASFRRERWQAGLGVVVRDSSGR
        +LW +W  RN+  F+G E          +    EW+T      ++ +     G Q V     V+W  P   W K N DA+++ E  + G+G ++R+ SG 
Subjt:  VLWPVWNCRNQRKFRGLE---------PVVGLVEWATSYISSFQQAISACGVGVQSVAAREDVRWSPPEAGWYKVNVDASFRRERWQAGLGVVVRDSSGR

Query:  VM
        V+
Subjt:  VM

AT3G09510.1 Ribonuclease H-like superfamily protein2.4e-1524.07Show/hide
Query:  WNEGLIQQHFSPQEVGLILSIPVWVGAE-DKFVWHYEKSGLFSVKSGYRLGQSAWLAQFPSSSSNESIMGWWKGVWKMLIPNKIKIFLWRLSLDRLPTID
        W++  I Q     + G I  I +    + DK +W+Y  +G ++V+SGY L         P+ +     +     +W + I  K+K FLWR     L T +
Subjt:  WNEGLIQQHFSPQEVGLILSIPVWVGAE-DKFVWHYEKSGLFSVKSGYRLGQSAWLAQFPSSSSNESIMGWWKGVWKMLIPNKIKIFLWRLSLDRLPTID

Query:  NLGIRGCDVLNVCGLCGQGGESSLHVFWHCK------RCRAGSMF--------------DLLREVRDEVGWERFGLFVV-VLWPVWNCRNQ---RKFR--
         L  RG  +   C  C +  ES  H  + C       R    S+               ++L  V+D    +   L  V ++W +W  RN     KFR  
Subjt:  NLGIRGCDVLNVCGLCGQGGESSLHVFWHCK------RCRAGSMF--------------DLLREVRDEVGWERFGLFVV-VLWPVWNCRNQ---RKFR--

Query:  GLEPVVGLVEWATSYISSFQQAISACGVGVQSVAAREDVRWSPPEAGWYKVNVDASFRRERWQAGLGVVVRDSSGRVMLSASLVQRHVRSPKMAE
          + V+        ++++ Q          Q   A   + W  P A + K N DA F  ++ +A  G ++R+  G  +   S+   H  +P  AE
Subjt:  GLEPVVGLVEWATSYISSFQQAISACGVGVQSVAAREDVRWSPPEAGWYKVNVDASFRRERWQAGLGVVVRDSSGRVMLSASLVQRHVRSPKMAE

AT3G25270.1 Ribonuclease H-like superfamily protein2.1e-1128.37Show/hide
Query:  VWKMLIPNKIKIFLWRLSLDRLPTIDNLGIRGCDVLNVCGLCGQGGESSLHVFWHCKRCR-----AGSMFDLLR------EVRDEV---------GWERF
        +WK+    KIK FLW+L    L T DNL  R       C  C Q  E+S H+F+ C   +     +G     LR      E + E+           + F
Subjt:  VWKMLIPNKIKIFLWRLSLDRLPTIDNLGIRGCDVLNVCGLCGQGGESSLHVFWHCKRCR-----AGSMFDLLR------EVRDEV---------GWERF

Query:  GLFVVVLWPVWNCRNQRKFR--------GLEPVVGLV-EW--ATSYISSFQQAISACGVGVQSVAAREDVRWSPPEAGWYKVNVDASFRRERWQAGLGVV
         L + +LW +W  RNQ  F+         L+     V EW    +Y+ S  Q + +     Q   AR   +W  P + W K N D +F  +   A  G +
Subjt:  GLFVVVLWPVWNCRNQRKFR--------GLEPVVGLV-EW--ATSYISSFQQAISACGVGVQSVAAREDVRWSPPEAGWYKVNVDASFRRERWQAGLGVV

Query:  VRDSSGRVMLSASLV
        +RD +G  M S   +
Subjt:  VRDSSGRVMLSASLV

AT4G29090.1 Ribonuclease H-like superfamily protein1.3e-1826.38Show/hide
Query:  QWNEGLIQQHFSPQEVGLILSI-PVWVGAEDKFVWHYEKSGLFSVKSGY-RLGQSAWLAQFPSSSSNESIMGWWKGVWKMLIPNKIKIFLWRLSLDRLPT
        +W + +I+  F   E  LI  + P      D + W Y  SG ++VKSGY  L Q       P   S  S+   ++ +WK     KI+ FLW+   + LP 
Subjt:  QWNEGLIQQHFSPQEVGLILSI-PVWVGAEDKFVWHYEKSGLFSVKSGY-RLGQSAWLAQFPSSSSNESIMGWWKGVWKMLIPNKIKIFLWRLSLDRLPT

Query:  IDNLGIRGCDVLNVCGLCGQGGESSLHVFWHCKRCR----------------AGSMFDLLREV----RDEVGWERFGLFVV-VLWPVWNCRNQRKFRGLE
           L  R     + C  C    E+  H+ + C   R                A S++  L  V         WE+    V  +LW +W  RN+  FRG E
Subjt:  IDNLGIRGCDVLNVCGLCGQGGESSLHVFWHCKRCR----------------AGSMFDLLREV----RDEVGWERFGLFVV-VLWPVWNCRNQRKFRGLE

Query:  -PVVGLVEWATSYISSFQQAISACGVGVQSVAAREDV-RWSPPEAGWYKVNVDASFRRERWQAGLGVVVRDSSGRVMLSASLVQRHVRSPKMAE----GW
             ++  A   +  ++    A   G +    R    RW PP   W K N DA++ R+  + G+G V+R+  G V    +     ++S   AE     W
Subjt:  -PVVGLVEWATSYISSFQQAISACGVGVQSVAAREDV-RWSPPEAGWYKVNVDASFRRERWQAGLGVVVRDSSGRVMLSASLVQRHVRSPKMAE----GW

Query:  AAVKGTR
        A +  +R
Subjt:  AAVKGTR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGACATCGGGGCAGTGGAACGAAGGGCTCATCCAGCAGCATTTTAGCCCTCAGGAGGTCGGTCTAATTTTGTCAATTCCTGTGTGGGTTGGGGCAGAGGATAAGTT
TGTGTGGCATTATGAGAAGTCAGGCCTGTTTTCGGTTAAAAGTGGATATCGGTTGGGGCAGTCAGCTTGGCTTGCGCAGTTTCCATCTTCTTCTTCGAATGAGTCGATAA
TGGGTTGGTGGAAGGGGGTTTGGAAGATGCTTATCCCGAATAAGATCAAGATTTTTCTTTGGAGACTTTCTTTGGACCGCTTGCCCACGATTGATAATTTGGGCATTCGG
GGCTGTGACGTTCTGAACGTTTGTGGCCTCTGTGGGCAAGGTGGGGAGTCCAGTCTGCATGTCTTCTGGCATTGCAAAAGGTGCAGGGCTGGGTCTATGTTTGATCTTCT
TAGGGAAGTGAGGGATGAGGTTGGTTGGGAAAGATTTGGGTTGTTTGTGGTGGTGTTGTGGCCTGTGTGGAACTGTCGAAATCAGCGGAAATTTAGGGGCCTAGAACCAG
TGGTGGGACTCGTAGAGTGGGCGACGAGTTATATCTCGTCGTTCCAGCAGGCGATCTCAGCTTGTGGAGTGGGGGTGCAGAGTGTTGCTGCAAGGGAAGATGTGAGATGG
AGTCCCCCGGAGGCTGGGTGGTATAAGGTGAATGTAGATGCGTCCTTTAGGAGGGAGCGATGGCAGGCGGGTCTGGGAGTGGTGGTTCGGGACTCCTCTGGTCGGGTTAT
GCTGTCAGCGTCTTTGGTGCAGCGACATGTGCGAAGCCCGAAGATGGCTGAAGGTTGGGCCGCAGTTAAGGGAACGAGATTGGCAGTGGAGATGGGTTTGGGCCCTTGGT
GTTGGAGACTAACTCCAGTCGGGTGGCTAGTTTCTTCCCAGATGAGGCAGGGGATGACTTCTCATATGTGGGTGCCCTGGTGGCGGACTTACGAAAGGACATGCCATGTC
CTTCTTTTTTCTGCTGCAGGTTATGACGGAGGGCATGGAGCTAGTGAGGATCGAGAATGGATAGCAAACCAAAGGCCCTTCAAATTAGAAGGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGACGACATCGGGGCAGTGGAACGAAGGGCTCATCCAGCAGCATTTTAGCCCTCAGGAGGTCGGTCTAATTTTGTCAATTCCTGTGTGGGTTGGGGCAGAGGATAAGTT
TGTGTGGCATTATGAGAAGTCAGGCCTGTTTTCGGTTAAAAGTGGATATCGGTTGGGGCAGTCAGCTTGGCTTGCGCAGTTTCCATCTTCTTCTTCGAATGAGTCGATAA
TGGGTTGGTGGAAGGGGGTTTGGAAGATGCTTATCCCGAATAAGATCAAGATTTTTCTTTGGAGACTTTCTTTGGACCGCTTGCCCACGATTGATAATTTGGGCATTCGG
GGCTGTGACGTTCTGAACGTTTGTGGCCTCTGTGGGCAAGGTGGGGAGTCCAGTCTGCATGTCTTCTGGCATTGCAAAAGGTGCAGGGCTGGGTCTATGTTTGATCTTCT
TAGGGAAGTGAGGGATGAGGTTGGTTGGGAAAGATTTGGGTTGTTTGTGGTGGTGTTGTGGCCTGTGTGGAACTGTCGAAATCAGCGGAAATTTAGGGGCCTAGAACCAG
TGGTGGGACTCGTAGAGTGGGCGACGAGTTATATCTCGTCGTTCCAGCAGGCGATCTCAGCTTGTGGAGTGGGGGTGCAGAGTGTTGCTGCAAGGGAAGATGTGAGATGG
AGTCCCCCGGAGGCTGGGTGGTATAAGGTGAATGTAGATGCGTCCTTTAGGAGGGAGCGATGGCAGGCGGGTCTGGGAGTGGTGGTTCGGGACTCCTCTGGTCGGGTTAT
GCTGTCAGCGTCTTTGGTGCAGCGACATGTGCGAAGCCCGAAGATGGCTGAAGGTTGGGCCGCAGTTAAGGGAACGAGATTGGCAGTGGAGATGGGTTTGGGCCCTTGGT
GTTGGAGACTAACTCCAGTCGGGTGGCTAGTTTCTTCCCAGATGAGGCAGGGGATGACTTCTCATATGTGGGTGCCCTGGTGGCGGACTTACGAAAGGACATGCCATGTC
CTTCTTTTTTCTGCTGCAGGTTATGACGGAGGGCATGGAGCTAGTGAGGATCGAGAATGGATAGCAAACCAAAGGCCCTTCAAATTAGAAGGGTGA
Protein sequenceShow/hide protein sequence
MTTSGQWNEGLIQQHFSPQEVGLILSIPVWVGAEDKFVWHYEKSGLFSVKSGYRLGQSAWLAQFPSSSSNESIMGWWKGVWKMLIPNKIKIFLWRLSLDRLPTIDNLGIR
GCDVLNVCGLCGQGGESSLHVFWHCKRCRAGSMFDLLREVRDEVGWERFGLFVVVLWPVWNCRNQRKFRGLEPVVGLVEWATSYISSFQQAISACGVGVQSVAAREDVRW
SPPEAGWYKVNVDASFRRERWQAGLGVVVRDSSGRVMLSASLVQRHVRSPKMAEGWAAVKGTRLAVEMGLGPWCWRLTPVGWLVSSQMRQGMTSHMWVPWWRTYERTCHV
LLFSAAGYDGGHGASEDREWIANQRPFKLEG