| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0039950.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] | 1.1e-98 | 45.79 | Show/hide |
Query: FFQKGVINRNVNETYIALIPKKSKSLQISDFRPISLTSILYRLIAKTLVERLKCTLAATIAENQLAFVKGRQITDAILVANEVIDFWKSSRTRGIIIKLD
F +IN+ VNET I LI KK +DFRPISLT+ +Y+LIAKTL +RLK TL TI+E+Q+AFVKGRQIT+AIL+ANE +DFW+S + RG +IKLD
Subjt: FFQKGVINRNVNETYIALIPKKSKSLQISDFRPISLTSILYRLIAKTLVERLKCTLAATIAENQLAFVKGRQITDAILVANEVIDFWKSSRTRGIIIKLD
Query: IEKAFDKINWDFIDKVLLFKGFSNTWCSWIMACIFSVSYSILLNGKPRVRLFRRSRAKASLRDAPFLQYLFLIFSLQM-------------EFSCFLNM-
IEKAFDK+NW FID VL+ K +S W I +CI SV YSIL+NG+PR R+ + +PF+ L + + ++ +FS LN+
Subjt: IEKAFDKINWDFIDKVLLFKGFSNTWCSWIMACIFSVSYSILLNGKPRVRLFRRSRAKASLRDAPFLQYLFLIFSLQM-------------EFSCFLNM-
Query: ------------------LENLFNIIKVFEISSGLNINFSKSSISGINLESYRGAQVASKWGCPLSPLPISYLGTLLGGNPSSASFWAPMIEKIHHKLEN
+ NL I+ +FE +SGLNIN SKS+I IN+ + R +A WG LP SYLG LGG PSS++FW +++KI KL N
Subjt: ------------------LENLFNIIKVFEISSGLNINFSKSSISGINLESYRGAQVASKWGCPLSPLPISYLGTLLGGNPSSASFWAPMIEKIHHKLEN
Query: WRFFYISKGGRLTLIQATLNSIPTYMLSIFKAPQSVWFKIDKIVRSFLWHGLDLSGNLPLVNWNVVAAPKEFGGLGFFKSRISNNALQIKWLWRYYQEES
W++ +SKGGR+TLI +TL S+P Y +S+FK P+ + KI+ R+FLW+G N+ L+ WN + +PKE GGLG +N AL KWLW++ E+
Subjt: WRFFYISKGGRLTLIQATLNSIPTYMLSIFKAPQSVWFKIDKIVRSFLWHGLDLSGNLPLVNWNVVAAPKEFGGLGFFKSRISNNALQIKWLWRYYQEES
Query: PLWKRFISAKYSAPRPGALPNQARFSSS
PLWKR I +KY + G+ P+ +FSS+
Subjt: PLWKRFISAKYSAPRPGALPNQARFSSS
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| KAA0045262.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] | 7.4e-100 | 50.93 | Show/hide |
Query: FFQKGVINRNVNETYIALIPKKSKSLQISDFRPISLTSILYRLIAKTLVERLKCTLAATIAENQLAFVKGRQITDAILVANEVIDFWKSSRTRGIIIKLD
FF+KGVIN+N+N TYIALI KK Q DFRPISLT+ +Y++IAKTL RLK TL TI+ NQLAF+K RQITDAIL+ANE +D+WK + +G I+KLD
Subjt: FFQKGVINRNVNETYIALIPKKSKSLQISDFRPISLTSILYRLIAKTLVERLKCTLAATIAENQLAFVKGRQITDAILVANEVIDFWKSSRTRGIIIKLD
Query: IEKAFDKINWDFIDKVLLFKGFSNTWCSWIMACIFSVSYSILLNGKP--RVRLFRRSRAKASLRDAPFLQYLFL---IFSLQMEFSCFLNMLENLFNIIK
IEKAFD +NWDFID VL K F N+W WI CI +V+YS+++NG+P R++ R R SL + + ++ I + CFLN NL +
Subjt: IEKAFDKINWDFIDKVLLFKGFSNTWCSWIMACIFSVSYSILLNGKP--RVRLFRRSRAKASLRDAPFLQYLFL---IFSLQMEFSCFLNMLENLFNIIK
Query: VFEISSGLNINFSKSSISGINLESYRGAQVASKWGCPLSPLPISYLGTLLGGNPSSASFWAPMIEKIHHKLENWRFFYISKGGRLTLIQATLNSIPTYML
+FE +SGL IN SKS++ +N+ R + AS WG LP++YLG LGGNP S+ FW + +KI KL NW++ ISKGGRLTLI+ TL+S+P Y L
Subjt: VFEISSGLNINFSKSSISGINLESYRGAQVASKWGCPLSPLPISYLGTLLGGNPSSASFWAPMIEKIHHKLENWRFFYISKGGRLTLIQATLNSIPTYML
Query: SIFKAPQSVWFKIDKIVRSFLWHGLDLSGNLPLVNWNVVAAPKEFGGLGFFKSRISNNALQIKWLWRYYQEESPLWK
S+F+AP S I+K R+FLW G + S L+NW V PKE GGLG + +++N AL KWLWRYY E + LW+
Subjt: SIFKAPQSVWFKIDKIVRSFLWHGLDLSGNLPLVNWNVVAAPKEFGGLGFFKSRISNNALQIKWLWRYYQEESPLWK
|
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| KAA0056839.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] | 2.1e-99 | 47.66 | Show/hide |
Query: FFQKGVINRNVNETYIALIPKKSKSLQISDFRPISLTSILYRLIAKTLVERLKCTLAATIAENQLAFVKGRQITDAILVANEVIDFWKSSRTRGIIIKLD
F + G++N NVN T+IALI KK K + SD+RPISLT+ LY+L+AK L RLK L TIAENQ+AF+KGRQI DAIL+ANE ID WK + +G ++KLD
Subjt: FFQKGVINRNVNETYIALIPKKSKSLQISDFRPISLTSILYRLIAKTLVERLKCTLAATIAENQLAFVKGRQITDAILVANEVIDFWKSSRTRGIIIKLD
Query: IEKAFDKINWDFIDKVLLFKGFSNTWCSWIMACIFSVSYSILLNGKPRVRLFRRSRAKASLRDAPF-----LQYLFLIFS--------LQMEFSCFLNM-
+EKAFDKI+W FID +L K F + W WI ACI +V YSILLNG P+ R+ + +PF + YL + S + F+ + N+
Subjt: IEKAFDKINWDFIDKVLLFKGFSNTWCSWIMACIFSVSYSILLNGKPRVRLFRRSRAKASLRDAPF-----LQYLFLIFS--------LQMEFSCFLNM-
Query: ------------------LENLFNIIKVFEISSGLNINFSKSSISGINLESYRGAQVASKWGCPLSPLPISYLGTLLGGNPSSASFWAPMIEKIHHKLEN
L NL + +FE +SGL N SKS+IS IN+ + R Q+AS +G LP++YLG LGGNP S SFW+ IE IH KL
Subjt: ------------------LENLFNIIKVFEISSGLNINFSKSSISGINLESYRGAQVASKWGCPLSPLPISYLGTLLGGNPSSASFWAPMIEKIHHKLEN
Query: WRFFYISKGGRLTLIQATLNSIPTYMLSIFKAPQSVWFKIDKIVRSFLWHGLDLSGNLPLVNWNVVAAPKEFGGLGFFKSRISNNALQIKWLWRYYQEES
W++ ISKGGRLTL++A+L+S+PTY LS FKAP SV+ +I+K R FLW G + N L+NWN+ +PKE GGLG K + +N AL KWLWRY+ E +
Subjt: WRFFYISKGGRLTLIQATLNSIPTYMLSIFKAPQSVWFKIDKIVRSFLWHGLDLSGNLPLVNWNVVAAPKEFGGLGFFKSRISNNALQIKWLWRYYQEES
Query: PLWKRFISAKYSAPRPGALPNQARFSSS
LWK+ I AKY+ G +P R SS+
Subjt: PLWKRFISAKYSAPRPGALPNQARFSSS
|
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| KAA0057507.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] | 1.4e-98 | 47.43 | Show/hide |
Query: FFQKGVINRNVNETYIALIPKKSKSLQISDFRPISLTSILYRLIAKTLVERLKCTLAATIAENQLAFVKGRQITDAILVANEVIDFWKSSRTRGIIIKLD
F + G++N NVN T+IALI KK K + SD+RPISLT+ LY+++AK L RLK L TIAENQ+AF+KGRQI DAIL+ANE ID WK + +G ++KLD
Subjt: FFQKGVINRNVNETYIALIPKKSKSLQISDFRPISLTSILYRLIAKTLVERLKCTLAATIAENQLAFVKGRQITDAILVANEVIDFWKSSRTRGIIIKLD
Query: IEKAFDKINWDFIDKVLLFKGFSNTWCSWIMACIFSVSYSILLNGKPRVRLFRRSRAKASLRDAPF-----LQYLFLIFS----------LQMEFSCFLN
IEKAFDKI+W FID +L K F + W WI ACI +V YSILLNG P+ R+ + +PF + YL + S + C ++
Subjt: IEKAFDKINWDFIDKVLLFKGFSNTWCSWIMACIFSVSYSILLNGKPRVRLFRRSRAKASLRDAPF-----LQYLFLIFS----------LQMEFSCFLN
Query: -----------------MLENLFNIIKVFEISSGLNINFSKSSISGINLESYRGAQVASKWGCPLSPLPISYLGTLLGGNPSSASFWAPMIEKIHHKLEN
L NL + +FE +SGL N SKS+IS IN+ + R Q+AS +G LP++YLG LGGNP S SFW IE IH KL
Subjt: -----------------MLENLFNIIKVFEISSGLNINFSKSSISGINLESYRGAQVASKWGCPLSPLPISYLGTLLGGNPSSASFWAPMIEKIHHKLEN
Query: WRFFYISKGGRLTLIQATLNSIPTYMLSIFKAPQSVWFKIDKIVRSFLWHGLDLSGNLPLVNWNVVAAPKEFGGLGFFKSRISNNALQIKWLWRYYQEES
W++ ISKGGRLTL++A+L+S+PTY LS FKAP SV+ +I+K R FLW G + N L+NWN+ +PKE GGLG K + +N AL KWLWRY+ E +
Subjt: WRFFYISKGGRLTLIQATLNSIPTYMLSIFKAPQSVWFKIDKIVRSFLWHGLDLSGNLPLVNWNVVAAPKEFGGLGFFKSRISNNALQIKWLWRYYQEES
Query: PLWKRFISAKYSAPRPGALPNQARFSSS
LWK+ I AKY+ G +P R SS+
Subjt: PLWKRFISAKYSAPRPGALPNQARFSSS
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| TYK08190.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] | 1.3e-99 | 47.9 | Show/hide |
Query: FFQKGVINRNVNETYIALIPKKSKSLQISDFRPISLTSILYRLIAKTLVERLKCTLAATIAENQLAFVKGRQITDAILVANEVIDFWKSSRTRGIIIKLD
F + G++N NVN T+IALI KK K + SD+RPISLT+ LY+++AK L RLK L TIAENQ+AF+KGRQI DAIL+ANEVID WK + +G ++KLD
Subjt: FFQKGVINRNVNETYIALIPKKSKSLQISDFRPISLTSILYRLIAKTLVERLKCTLAATIAENQLAFVKGRQITDAILVANEVIDFWKSSRTRGIIIKLD
Query: IEKAFDKINWDFIDKVLLFKGFSNTWCSWIMACIFSVSYSILLNGKPRVRLFRRSRAKASLRDAPF-----LQYLFLIFS--------LQMEFSCFLNM-
IEKAFDKI+W FID +L K F + W WI ACI +V YSILLNG P+ R+ + +PF + YL + S + F+ + N+
Subjt: IEKAFDKINWDFIDKVLLFKGFSNTWCSWIMACIFSVSYSILLNGKPRVRLFRRSRAKASLRDAPF-----LQYLFLIFS--------LQMEFSCFLNM-
Query: ------------------LENLFNIIKVFEISSGLNINFSKSSISGINLESYRGAQVASKWGCPLSPLPISYLGTLLGGNPSSASFWAPMIEKIHHKLEN
L NL + +FE +SGL N SKS+IS IN+ + R Q+AS +G LP++YLG LGGNP S SFW IE IH KL
Subjt: ------------------LENLFNIIKVFEISSGLNINFSKSSISGINLESYRGAQVASKWGCPLSPLPISYLGTLLGGNPSSASFWAPMIEKIHHKLEN
Query: WRFFYISKGGRLTLIQATLNSIPTYMLSIFKAPQSVWFKIDKIVRSFLWHGLDLSGNLPLVNWNVVAAPKEFGGLGFFKSRISNNALQIKWLWRYYQEES
W++ ISKGGRLTL++A+L+S+PTY LS FKAP SV+ +I+K R FLW G + N L+NWN+ +PKE GGLG K + +N AL KWLWRY+ E +
Subjt: WRFFYISKGGRLTLIQATLNSIPTYMLSIFKAPQSVWFKIDKIVRSFLWHGLDLSGNLPLVNWNVVAAPKEFGGLGFFKSRISNNALQIKWLWRYYQEES
Query: PLWKRFISAKYSAPRPGALPNQARFSSS
LWK+ I AKY+ G +P R SS+
Subjt: PLWKRFISAKYSAPRPGALPNQARFSSS
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7T9I7 LINE-1 retrotransposable element ORF2 protein | 5.2e-99 | 45.79 | Show/hide |
Query: FFQKGVINRNVNETYIALIPKKSKSLQISDFRPISLTSILYRLIAKTLVERLKCTLAATIAENQLAFVKGRQITDAILVANEVIDFWKSSRTRGIIIKLD
F +IN+ VNET I LI KK +DFRPISLT+ +Y+LIAKTL +RLK TL TI+E+Q+AFVKGRQIT+AIL+ANE +DFW+S + RG +IKLD
Subjt: FFQKGVINRNVNETYIALIPKKSKSLQISDFRPISLTSILYRLIAKTLVERLKCTLAATIAENQLAFVKGRQITDAILVANEVIDFWKSSRTRGIIIKLD
Query: IEKAFDKINWDFIDKVLLFKGFSNTWCSWIMACIFSVSYSILLNGKPRVRLFRRSRAKASLRDAPFLQYLFLIFSLQM-------------EFSCFLNM-
IEKAFDK+NW FID VL+ K +S W I +CI SV YSIL+NG+PR R+ + +PF+ L + + ++ +FS LN+
Subjt: IEKAFDKINWDFIDKVLLFKGFSNTWCSWIMACIFSVSYSILLNGKPRVRLFRRSRAKASLRDAPFLQYLFLIFSLQM-------------EFSCFLNM-
Query: ------------------LENLFNIIKVFEISSGLNINFSKSSISGINLESYRGAQVASKWGCPLSPLPISYLGTLLGGNPSSASFWAPMIEKIHHKLEN
+ NL I+ +FE +SGLNIN SKS+I IN+ + R +A WG LP SYLG LGG PSS++FW +++KI KL N
Subjt: ------------------LENLFNIIKVFEISSGLNINFSKSSISGINLESYRGAQVASKWGCPLSPLPISYLGTLLGGNPSSASFWAPMIEKIHHKLEN
Query: WRFFYISKGGRLTLIQATLNSIPTYMLSIFKAPQSVWFKIDKIVRSFLWHGLDLSGNLPLVNWNVVAAPKEFGGLGFFKSRISNNALQIKWLWRYYQEES
W++ +SKGGR+TLI +TL S+P Y +S+FK P+ + KI+ R+FLW+G N+ L+ WN + +PKE GGLG +N AL KWLW++ E+
Subjt: WRFFYISKGGRLTLIQATLNSIPTYMLSIFKAPQSVWFKIDKIVRSFLWHGLDLSGNLPLVNWNVVAAPKEFGGLGFFKSRISNNALQIKWLWRYYQEES
Query: PLWKRFISAKYSAPRPGALPNQARFSSS
PLWKR I +KY + G+ P+ +FSS+
Subjt: PLWKRFISAKYSAPRPGALPNQARFSSS
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| A0A5A7US62 LINE-1 retrotransposable element ORF2 protein | 6.7e-99 | 47.43 | Show/hide |
Query: FFQKGVINRNVNETYIALIPKKSKSLQISDFRPISLTSILYRLIAKTLVERLKCTLAATIAENQLAFVKGRQITDAILVANEVIDFWKSSRTRGIIIKLD
F + G++N NVN T+IALI KK K + SD+RPISLT+ LY+++AK L RLK L TIAENQ+AF+KGRQI DAIL+ANE ID WK + +G ++KLD
Subjt: FFQKGVINRNVNETYIALIPKKSKSLQISDFRPISLTSILYRLIAKTLVERLKCTLAATIAENQLAFVKGRQITDAILVANEVIDFWKSSRTRGIIIKLD
Query: IEKAFDKINWDFIDKVLLFKGFSNTWCSWIMACIFSVSYSILLNGKPRVRLFRRSRAKASLRDAPF-----LQYLFLIFS----------LQMEFSCFLN
IEKAFDKI+W FID +L K F + W WI ACI +V YSILLNG P+ R+ + +PF + YL + S + C ++
Subjt: IEKAFDKINWDFIDKVLLFKGFSNTWCSWIMACIFSVSYSILLNGKPRVRLFRRSRAKASLRDAPF-----LQYLFLIFS----------LQMEFSCFLN
Query: -----------------MLENLFNIIKVFEISSGLNINFSKSSISGINLESYRGAQVASKWGCPLSPLPISYLGTLLGGNPSSASFWAPMIEKIHHKLEN
L NL + +FE +SGL N SKS+IS IN+ + R Q+AS +G LP++YLG LGGNP S SFW IE IH KL
Subjt: -----------------MLENLFNIIKVFEISSGLNINFSKSSISGINLESYRGAQVASKWGCPLSPLPISYLGTLLGGNPSSASFWAPMIEKIHHKLEN
Query: WRFFYISKGGRLTLIQATLNSIPTYMLSIFKAPQSVWFKIDKIVRSFLWHGLDLSGNLPLVNWNVVAAPKEFGGLGFFKSRISNNALQIKWLWRYYQEES
W++ ISKGGRLTL++A+L+S+PTY LS FKAP SV+ +I+K R FLW G + N L+NWN+ +PKE GGLG K + +N AL KWLWRY+ E +
Subjt: WRFFYISKGGRLTLIQATLNSIPTYMLSIFKAPQSVWFKIDKIVRSFLWHGLDLSGNLPLVNWNVVAAPKEFGGLGFFKSRISNNALQIKWLWRYYQEES
Query: PLWKRFISAKYSAPRPGALPNQARFSSS
LWK+ I AKY+ G +P R SS+
Subjt: PLWKRFISAKYSAPRPGALPNQARFSSS
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| A0A5A7UTI6 LINE-1 retrotransposable element ORF2 protein | 1.0e-99 | 47.66 | Show/hide |
Query: FFQKGVINRNVNETYIALIPKKSKSLQISDFRPISLTSILYRLIAKTLVERLKCTLAATIAENQLAFVKGRQITDAILVANEVIDFWKSSRTRGIIIKLD
F + G++N NVN T+IALI KK K + SD+RPISLT+ LY+L+AK L RLK L TIAENQ+AF+KGRQI DAIL+ANE ID WK + +G ++KLD
Subjt: FFQKGVINRNVNETYIALIPKKSKSLQISDFRPISLTSILYRLIAKTLVERLKCTLAATIAENQLAFVKGRQITDAILVANEVIDFWKSSRTRGIIIKLD
Query: IEKAFDKINWDFIDKVLLFKGFSNTWCSWIMACIFSVSYSILLNGKPRVRLFRRSRAKASLRDAPF-----LQYLFLIFS--------LQMEFSCFLNM-
+EKAFDKI+W FID +L K F + W WI ACI +V YSILLNG P+ R+ + +PF + YL + S + F+ + N+
Subjt: IEKAFDKINWDFIDKVLLFKGFSNTWCSWIMACIFSVSYSILLNGKPRVRLFRRSRAKASLRDAPF-----LQYLFLIFS--------LQMEFSCFLNM-
Query: ------------------LENLFNIIKVFEISSGLNINFSKSSISGINLESYRGAQVASKWGCPLSPLPISYLGTLLGGNPSSASFWAPMIEKIHHKLEN
L NL + +FE +SGL N SKS+IS IN+ + R Q+AS +G LP++YLG LGGNP S SFW+ IE IH KL
Subjt: ------------------LENLFNIIKVFEISSGLNINFSKSSISGINLESYRGAQVASKWGCPLSPLPISYLGTLLGGNPSSASFWAPMIEKIHHKLEN
Query: WRFFYISKGGRLTLIQATLNSIPTYMLSIFKAPQSVWFKIDKIVRSFLWHGLDLSGNLPLVNWNVVAAPKEFGGLGFFKSRISNNALQIKWLWRYYQEES
W++ ISKGGRLTL++A+L+S+PTY LS FKAP SV+ +I+K R FLW G + N L+NWN+ +PKE GGLG K + +N AL KWLWRY+ E +
Subjt: WRFFYISKGGRLTLIQATLNSIPTYMLSIFKAPQSVWFKIDKIVRSFLWHGLDLSGNLPLVNWNVVAAPKEFGGLGFFKSRISNNALQIKWLWRYYQEES
Query: PLWKRFISAKYSAPRPGALPNQARFSSS
LWK+ I AKY+ G +P R SS+
Subjt: PLWKRFISAKYSAPRPGALPNQARFSSS
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| A0A5D3CA17 LINE-1 retrotransposable element ORF2 protein | 6.1e-100 | 47.9 | Show/hide |
Query: FFQKGVINRNVNETYIALIPKKSKSLQISDFRPISLTSILYRLIAKTLVERLKCTLAATIAENQLAFVKGRQITDAILVANEVIDFWKSSRTRGIIIKLD
F + G++N NVN T+IALI KK K + SD+RPISLT+ LY+++AK L RLK L TIAENQ+AF+KGRQI DAIL+ANEVID WK + +G ++KLD
Subjt: FFQKGVINRNVNETYIALIPKKSKSLQISDFRPISLTSILYRLIAKTLVERLKCTLAATIAENQLAFVKGRQITDAILVANEVIDFWKSSRTRGIIIKLD
Query: IEKAFDKINWDFIDKVLLFKGFSNTWCSWIMACIFSVSYSILLNGKPRVRLFRRSRAKASLRDAPF-----LQYLFLIFS--------LQMEFSCFLNM-
IEKAFDKI+W FID +L K F + W WI ACI +V YSILLNG P+ R+ + +PF + YL + S + F+ + N+
Subjt: IEKAFDKINWDFIDKVLLFKGFSNTWCSWIMACIFSVSYSILLNGKPRVRLFRRSRAKASLRDAPF-----LQYLFLIFS--------LQMEFSCFLNM-
Query: ------------------LENLFNIIKVFEISSGLNINFSKSSISGINLESYRGAQVASKWGCPLSPLPISYLGTLLGGNPSSASFWAPMIEKIHHKLEN
L NL + +FE +SGL N SKS+IS IN+ + R Q+AS +G LP++YLG LGGNP S SFW IE IH KL
Subjt: ------------------LENLFNIIKVFEISSGLNINFSKSSISGINLESYRGAQVASKWGCPLSPLPISYLGTLLGGNPSSASFWAPMIEKIHHKLEN
Query: WRFFYISKGGRLTLIQATLNSIPTYMLSIFKAPQSVWFKIDKIVRSFLWHGLDLSGNLPLVNWNVVAAPKEFGGLGFFKSRISNNALQIKWLWRYYQEES
W++ ISKGGRLTL++A+L+S+PTY LS FKAP SV+ +I+K R FLW G + N L+NWN+ +PKE GGLG K + +N AL KWLWRY+ E +
Subjt: WRFFYISKGGRLTLIQATLNSIPTYMLSIFKAPQSVWFKIDKIVRSFLWHGLDLSGNLPLVNWNVVAAPKEFGGLGFFKSRISNNALQIKWLWRYYQEES
Query: PLWKRFISAKYSAPRPGALPNQARFSSS
LWK+ I AKY+ G +P R SS+
Subjt: PLWKRFISAKYSAPRPGALPNQARFSSS
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| A0A5D3DZ07 LINE-1 retrotransposable element ORF2 protein | 3.6e-100 | 50.93 | Show/hide |
Query: FFQKGVINRNVNETYIALIPKKSKSLQISDFRPISLTSILYRLIAKTLVERLKCTLAATIAENQLAFVKGRQITDAILVANEVIDFWKSSRTRGIIIKLD
FF+KGVIN+N+N TYIALI KK Q DFRPISLT+ +Y++IAKTL RLK TL TI+ NQLAF+K RQITDAIL+ANE +D+WK + +G I+KLD
Subjt: FFQKGVINRNVNETYIALIPKKSKSLQISDFRPISLTSILYRLIAKTLVERLKCTLAATIAENQLAFVKGRQITDAILVANEVIDFWKSSRTRGIIIKLD
Query: IEKAFDKINWDFIDKVLLFKGFSNTWCSWIMACIFSVSYSILLNGKP--RVRLFRRSRAKASLRDAPFLQYLFL---IFSLQMEFSCFLNMLENLFNIIK
IEKAFD +NWDFID VL K F N+W WI CI +V+YS+++NG+P R++ R R SL + + ++ I + CFLN NL +
Subjt: IEKAFDKINWDFIDKVLLFKGFSNTWCSWIMACIFSVSYSILLNGKP--RVRLFRRSRAKASLRDAPFLQYLFL---IFSLQMEFSCFLNMLENLFNIIK
Query: VFEISSGLNINFSKSSISGINLESYRGAQVASKWGCPLSPLPISYLGTLLGGNPSSASFWAPMIEKIHHKLENWRFFYISKGGRLTLIQATLNSIPTYML
+FE +SGL IN SKS++ +N+ R + AS WG LP++YLG LGGNP S+ FW + +KI KL NW++ ISKGGRLTLI+ TL+S+P Y L
Subjt: VFEISSGLNINFSKSSISGINLESYRGAQVASKWGCPLSPLPISYLGTLLGGNPSSASFWAPMIEKIHHKLENWRFFYISKGGRLTLIQATLNSIPTYML
Query: SIFKAPQSVWFKIDKIVRSFLWHGLDLSGNLPLVNWNVVAAPKEFGGLGFFKSRISNNALQIKWLWRYYQEESPLWK
S+F+AP S I+K R+FLW G + S L+NW V PKE GGLG + +++N AL KWLWRYY E + LW+
Subjt: SIFKAPQSVWFKIDKIVRSFLWHGLDLSGNLPLVNWNVVAAPKEFGGLGFFKSRISNNALQIKWLWRYYQEESPLWK
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| O00370 LINE-1 retrotransposable element ORF2 protein | 2.2e-14 | 21.67 | Show/hide |
Query: QKGVINRNVNETYIALIPKKSK-SLQISDFRPISLTSILYRLIAKTLVERLKCTLAATIAENQLAFVKGRQITDAILVANEVIDFWKSSRTRG-IIIKLD
++G++ + E I LIPK + + + +FRPISL +I +++ K L R++ + I +Q+ F+ G Q I + VI ++ + +II +D
Subjt: QKGVINRNVNETYIALIPKKSK-SLQISDFRPISLTSILYRLIAKTLVERLKCTLAATIAENQLAFVKGRQITDAILVANEVIDFWKSSRTRG-IIIKLD
Query: IEKAFDKINWDFIDKVLLFKGFSNTWCSWIMACIFSVSYSILLNGKPRVRLFRRSRAKASLRDAPFLQYLFL-----------------IFSLQMEFSCF
EKAFDKI F+ K L G + I A + +I+LNG+ ++ + +P L + L + +++ S F
Subjt: IEKAFDKINWDFIDKVLLFKGFSNTWCSWIMACIFSVSYSILLNGKPRVRLFRRSRAKASLRDAPFLQYLFL-----------------IFSLQMEFSCF
Query: LNML-----------ENLFNIIKVFEISSGLNINFSKSSISGINLESYRGAQVASKWGCPLSPLPISYLGTLLGGNPSS--ASFWAPMIEKIHHKLENWR
+ + +NL +I F SG IN KS N +Q+ + ++ I YLG L + + P++++I W+
Subjt: LNML-----------ENLFNIIKVFEISSGLNINFSKSSISGINLESYRGAQVASKWGCPLSPLPISYLGTLLGGNPSS--ASFWAPMIEKIHHKLENWR
Query: FFYISKGGRLTLIQATLNSIPTYMLSI--FKAPQSVWFKIDKIVRSFLWHGLDLSGNLPLVNWNVVAAPKEFGGLGFFKSRISNNALQIKWLWRYYQ-EE
S GR+ +++ + Y + K P + + +++K F+W + + ++++ + GG+ ++ A K W +YQ +
Subjt: FFYISKGGRLTLIQATLNSIPTYMLSI--FKAPQSVWFKIDKIVRSFLWHGLDLSGNLPLVNWNVVAAPKEFGGLGFFKSRISNNALQIKWLWRYYQ-EE
Query: SPLWKR
W R
Subjt: SPLWKR
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| P0C2F6 Putative ribonuclease H protein At1g65750 | 9.6e-18 | 36.07 | Show/hide |
Query: MIEKIHHKLENWRFFYISKGGRLTLIQATLNSIPTYMLSIFKAPQSVWFKIDKIVRSFLWHGLDLSGNLPLVNWNVVAAPKEFGGLGFFKSRISNNALQI
++E++ ++ WR +S GRLTL +A L+S+P + +S PQS+ ++D++ R+FLW LV W+ V +PK+ GGLG ++ N AL
Subjt: MIEKIHHKLENWRFFYISKGGRLTLIQATLNSIPTYMLSIFKAPQSVWFKIDKIVRSFLWHGLDLSGNLPLVNWNVVAAPKEFGGLGFFKSRISNNALQI
Query: KWLWRYYQEESPLWKRFISAKY
K WR QE++ LW + KY
Subjt: KWLWRYYQEESPLWKRFISAKY
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| P11369 LINE-1 retrotransposable element ORF2 protein | 1.9e-13 | 22.66 | Show/hide |
Query: EHSQTFDHGSVP---RFFFQ---KGVINRNVNETYIALIPKKSKS-LQISDFRPISLTSILYRLIAKTLVERLKCTLAATIAENQLAFVKGRQITDAILV
E QTF +P + F + +G + + E I LIPK K +I +FRPISL +I +++ K L R++ + A I +Q+ F+ G Q I
Subjt: EHSQTFDHGSVP---RFFFQ---KGVINRNVNETYIALIPKKSKS-LQISDFRPISLTSILYRLIAKTLVERLKCTLAATIAENQLAFVKGRQITDAILV
Query: ANEVIDFWKSSRTRG-IIIKLDIEKAFDKINWDFIDKVLLFKGFSNTWCSWIMACIFSVSYSILLNGKPRVRLFRRSRAKASLRDAPFLQYLFL------
+ VI + + + +II LD EKAFDKI F+ KVL G + + I A +I +NG+ + +S + +P+L + L
Subjt: ANEVIDFWKSSRTRG-IIIKLDIEKAFDKINWDFIDKVLLFKGFSNTWCSWIMACIFSVSYSILLNGKPRVRLFRRSRAKASLRDAPFLQYLFL------
Query: ------------------IFSLQMEFSCFL----NMLENLFNIIKVFEISSGLNINFSKSSISGINLESYRGAQVASKWGCPLSPLPISYLGTLLGGNPS
I L + ++ N L N+I F G IN +KS ++ + I YLG L
Subjt: ------------------IFSLQMEFSCFL----NMLENLFNIIKVFEISSGLNINFSKSSISGINLESYRGAQVASKWGCPLSPLPISYLGTLLGGNPS
Query: SA--SFWAPMIEKIHHKLENWRFFYISKGGRLTLIQATLNSIPTYMLSI--FKAPQSVWFKIDKIVRSFLWHGLDLSGNLPLVNWNVVAAPKEFGGLGFF
+ + ++I L W+ S GR+ +++ + Y + K P + +++ + F+W + P + +++ + GG+
Subjt: SA--SFWAPMIEKIHHKLENWRFFYISKGGRLTLIQATLNSIPTYMLSI--FKAPQSVWFKIDKIVRSFLWHGLDLSGNLPLVNWNVVAAPKEFGGLGFF
Query: KSRISNNALQIKWLWRYYQE-ESPLWKR
++ A+ IK W +Y++ + W R
Subjt: KSRISNNALQIKWLWRYYQE-ESPLWKR
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| P14381 Transposon TX1 uncharacterized 149 kDa protein | 2.4e-16 | 24.46 | Show/hide |
Query: FQKGVINRNVNETYIALIPKKSKSLQISDFRPISLTSILYRLIAKTLVERLKCTLAATIAENQLAFVKGRQITDAILVANEVIDFWKSSRTRGIIIKLDI
F+KG + + ++L+PKK I ++RP+SL S Y+++AK + RLK LA I +Q V GR I D + + +++ F + + + LD
Subjt: FQKGVINRNVNETYIALIPKKSKSLQISDFRPISLTSILYRLIAKTLVERLKCTLAATIAENQLAFVKGRQITDAILVANEVIDFWKSSRTRGIIIKLDI
Query: EKAFDKINWDFIDKVLLFKGFSNTWCSWIMA------CIFSVSYSIL--------------LNG-------KPRVRLFRRSRAKASLRDAPFLQYLFLIF
EKAFD+++ ++ L F + ++ C+ +++S+ L+G +P + L R+ L++ L
Subjt: EKAFDKINWDFIDKVLLFKGFSNTWCSWIMA------CIFSVSYSIL--------------LNG-------KPRVRLFRRSRAKASLRDAPFLQYLFLIF
Query: SLQMEFSCFLNMLENLFNIIKVFEISSGLNINFSKSS---ISGINLESYRGAQVASKWGCPLSPLPISYLGTLLGGN--PSSASFWAPMIEKIHHKLENW
+ + L LE +V+ +S IN+SKSS + ++ A W + I YLG L P S +F + E + +L W
Subjt: SLQMEFSCFLNMLENLFNIIKVFEISSGLNINFSKSS---ISGINLESYRGAQVASKWGCPLSPLPISYLGTLLGGN--PSSASFWAPMIEKIHHKLENW
Query: RFF--YISKGGRLTLIQATLNSIPTYMLSIFKAPQSVWFKIDKIVRSFLWHGLDLSGNLPLVNWNVVAAPKEFGGLGFFKSRISNNALQIKWLWRY-YQE
+ F +S GR +I + S Y L Q KI + + FLW G V+ V + P + GG G R + +++ + RY Y +
Subjt: RFF--YISKGGRLTLIQATLNSIPTYMLSIFKAPQSVWFKIDKIVRSFLWHGLDLSGNLPLVNWNVVAAPKEFGGLGFFKSRISNNALQIKWLWRY-YQE
Query: ESPLWKRFISAKYSAPR
SP W S+ Y R
Subjt: ESPLWKRFISAKYSAPR
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| Q03274 Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 (Fragment) | 3.5e-04 | 24.59 | Show/hide |
Query: QTFDHGSVPRFFFQKGVINRNVNETYIA----LIPKKSKSLQISDFRPISLTSILYRLIAKTLVERLKCTLAATIAENQLAFVKGRQITDAILVANEVID
Q +PR F Q ++ +V + A LIPK S++RPI++ S L RL+ + L +RL+ + A+ A + G + +L + I
Subjt: QTFDHGSVPRFFFQKGVINRNVNETYIA----LIPKKSKSLQISDFRPISLTSILYRLIAKTLVERLKCTLAATIAENQLAFVKGRQITDAILVANEVID
Query: FWKSSRTRGIIIKLDIEKAFDKINWDFIDKVLLFKGFSNTWCSWIMACIFSVSYSILLN-GKPRVRLFRRSRAKASLRDAPFL
+ R ++ LD+ KAFD ++ I + L G ++I + + +I + G ++ R K +PFL
Subjt: FWKSSRTRGIIIKLDIEKAFDKINWDFIDKVLLFKGFSNTWCSWIMACIFSVSYSILLN-GKPRVRLFRRSRAKASLRDAPFL
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